Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0000755

Physical Location & Seq

Genomic Coordinates Forward (+)

3038898 .. 3041508

Gene Structure 2611 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G001780.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1848 bp

ATGAGTATTGGGAATGTATTGAACTTTTACTATGCAGTTTTTTTTTCCAAGAGGAAATTATTTGGGCCACAAGAGTTTCGTTTGTGGAGTCATATATTTCTGGTTTTGTGTGTAGTTGCACTCTTTCTGGATCCTTTGTTCAGTTATATACTTGTGCTTAACGACGATCACAATTGCCTTAGATTGGACAGAGAATTGGGGGCCATAGCCGTTGTTTTCCGTTCCATCATTGATTTCTTCTATATTCTTCATATCATTTTTCAGTTCTGTTCCCGTATTGCTTGCCTCTCTTCTAAAGTTCCAGAGATTCGGGTAGAGATTCGTGCAAGTCCATGGAGATATTTCTTGTTCTACTCCCTAGTTGACATAATTGTAATTCTCCCACTACCACAGGTGTTAATTTTTATTGTTGTTCCAAAACTAAATGATTCCAGGGTTTTGGATTCAGCAGAGTGGTTCAACTTCATTGTTATTTTTCAATATGTGCTAAGGGTTATTCGAATCTGCTCCTTGTTGAAAAAAGTTACAAGGACTTCTCGTATCCTTGCTGAAACTGCATGGGCTAACCTCTTCCTTTATTTGCTTGCCAGTCATGTTGTTGGAGCCTTTTGGTACTTGTTCTCTATAGAGAGGAAAACAACTTGCTGGCGAGAAGCCTGTAAACATCATGATGTTGCCTACTGTTCTTTATATTGTGATGACAACTTTGGAACTGGAATGTTTTTGGATGACTCTTGCTCTACAGACTCCAAAATTTTCCATTATGGAATATTCATTGATGCCCTTCAATCCGGTATTGTGGATTCAGTGGATTTTGTACAGAAGATTTCTTACTGCTTTTGGTGGGGACTGCAAAATCTCAGCTCTCTCGGTCAAGGCCTCCAAACAAGTACCTATGTGTGGGAAATCTATTTTGCTGCTTTCGTTTCAATTTTGGGATTGGTCCTACTTTCATCTCTTATTGGAAATATGCAGACATATTTACAGTTGAAAACTGCGCGATTGGCAGAAATGAGATTGAAGGAGCAAGAGAGAGAATATTGTATGGCCTTCTACACACTTCCTCATGATCTCAAGAAGCGTATCAAAAAGGAGCAGTGGCGAGAAGATATAGGACTTACCATGGAGAAATTTTTTCTCAGTCTTCCCAAGGACCTTAGGAGAGATACAAAGCGCTATATATGCTTGGGTGCACTCCGGCGAGTGCCATTGTTTGATACATTGGATGAGCAACTGTTGGAAGCGATGTGTGATATTCTCAAGCCAGTAATCTACACAAAGGGAAGCTTCCTTATTCGGGAGGGCGACCCCGTGGATGGAATGCTCTTCATAATGCAAGGAATGGTGTTTAGTAGAGAGAGACTTGGTTTCTTCTCCATATGTCTCAAGGCAGGTGACTTTTGTGGTGAAGAGATCATAGCAACTCTTGATCTATCGTCACCTCTTCATCTTCCCATCTCAACCAGAACGGTCCAAGCCATTACTGTAGTGGAATCCTTCGTTTTAAAAGCCGAAGACTTTAGGTCTTTAGTCTCCCAGCAGTCTCAGGGCAGGCCGTTGAAGCACAACTTTAGGTTCTACACACAAACTTGGAGGATTTGGGCAGCTTGTTATATACAGGATGCTTGGCGGCGCTACCGCAGGATGAAGCTTGAAGAGTCTCTTCGGAAAGAGGAGAATGTGTTGCAAGATGCACTAGCCAGGGCTCGTGGTAGCTCGAGCTCCCAAAGCCTAGGTTCGGTCATTTATTCCTTGCGTTTCGCTGCTAATGCACTCGGTGCTATACGGCATAATGCTAGGCCTAGGCTACTTCAAAAGCCATCAGAGCCTGATATTTCCATTGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005249 GO:0005261 GO:0005267 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006950 GO:0006952 GO:0008150 GO:0008324 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009987 GO:0015075 GO:0015077 GO:0015079 GO:0015267 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042391 GO:0043207 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Ion_trans cNMP_binding

Protein Analysis

615

Amino Acids

71.4

Weight (kDa)

8.76

Isoelectric Point (pI)

48.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ion_trans	PF00520	29 - 334	3.9e-13	Ion transport protein
cNMP_binding	PF00027	424 - 513	6.8e-07	Cyclic nucleotide-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000755)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g31201 FvH4_7g31201 FvH4_7g31201 FvH4_7g31300 FvH4_7g31330
malus_domestica	MD01G1216700.v1.1 MD01G1216900.v1.1 MD01G1217000.v1.1 MD01G1217200.v1.1 MD01G1217400.v1.1 MD13G1117500.v1.1
prunus_persica	Prupe.2G308800_v2.0.a1
pyrus_communis	pycom01g22730 pycom01g22740 pycom01g22760
rosa_chinensis	RchiOBHm_Chr1g0380271 RchiOBHm_Chr1g0380281 RchiOBHm_Chr1g0380291 RchiOBHm_Chr1g0380351 RchiOBHm_Chr5g0056501 RchiOBHm_Chr5g0056511
rosa_laevigata	RLG00000013722 RLG00000026309 RLG00000026310 RLG00000026311 RLG00000026313
rosa_multiflora	Rmu_sc0000256.1_g000001 Rmu_sc0002387.1_g000005 Rmu_sc0002387.1_g000010 Rmu_sc0002387.1_g000012 Rmu_sc0003249.1_g000002 Rmu_sc0003249.1_g000003 Rmu_sc0003249.1_g000007 Rmu_sc0003249.1_g000008 Rmu_sc0003249.1_g000019 Rmu_sc0003249.1_g000030 Rmu_sc0005335.1_g000002 Rmu_sc0005335.1_g000010
rosa_roxburghii	Rroxscaffold_1G00023820 Rroxscaffold_2G00077310 Rroxscaffold_4G00279460 Rroxscaffold_4G00279470 Rroxscaffold_4G00279480 Rroxscaffold_4G00279500 Rroxscaffold_4G00279520 Rroxscaffold_4G00285960 Rroxscaffold_4G00330670
rosa_rugosa	Rorug01G0419800 Rorug01G0419900 Rorug01G0420000 Rorug01G0420000 Rorug01G0420100 Rorug05G0300400 Rorug05G0300500
rosa_samantha	Rh1AG444400 Rh1AG444600 Rh1AG444700 Rh1CG413000 Rh1CG413100 Rh1CG413300 Rh1CG413400 Rh1CG413500 Rh1CG413800 Rh1CG414000 Rh1CG414300 Rh2AG468600
rosa_wichuraiana	Rw1G001780 Rw1G038590 Rw1G038670 Rw1G038690 Rw5G015040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1382
Acc36I	ACCTGC	1 cut(s)	1382
AccII	CGCG	1 cut(s)	1000
AciI	CCGC	2 cut(s)	1630, 1639
AclWI	GGATC	2 cut(s)	125, 138
AcsI	RAATTY	2 cut(s)	753, 1130
AdeI	CACNNNGTG	1 cut(s)	1778
AfaI	GTAC	3 cut(s)	614, 819, 892
AfeI	AGCGCT	1 cut(s)	1175
AfiI	CCNNNNNNNGG	5 cut(s)	184, 900, 1297, 1316, 1738
AhdI	GACNNNNNGTC	1 cut(s)	1522
AjnI	CCWGG	2 cut(s)	431, 1700
AloI	GAACNNNNNNTCC	2 cut(s)	122, 154
AluBI	AGCT	6 cut(s)	864, 1287, 1607, 1651, 1716, 1722
AluI	AGCT	6 cut(s)	864, 1287, 1607, 1651, 1716, 1722
Alw21I	GWGCWC	2 cut(s)	1195, 1724
Alw26I	GTCTC	5 cut(s)	1354, 1388, 1537, 1548, 1665
Alw44I	GTGCAC	1 cut(s)	1191
AlwI	GGATC	2 cut(s)	125, 138
AlwNI	CAGNNNCTG	1 cut(s)	1829
Ama87I	CYCGRG	1 cut(s)	1717
Aor51HI	AGCGCT	1 cut(s)	1175
AoxI	GGCC	6 cut(s)	65, 201, 877, 1047, 1553, 1799
ApaLI	GTGCAC	1 cut(s)	1191
ApeKI	GCWGC	3 cut(s)	917, 1604, 1763
ApoI	RAATTY	2 cut(s)	753, 1130
AspA2I	CCTAGG	2 cut(s)	1732, 1802
AspLEI	GCGC	3 cut(s)	1000, 1176, 1635
AspS9I	GGNCC	5 cut(s)	65, 201, 943, 1153, 1471
AsuHPI	GGTGA	3 cut(s)	1406, 1418, 1431
AsuII	TTCGAA	1 cut(s)	499
AvaI	CYCGRG	1 cut(s)	1717
AvaII	GGWCC	3 cut(s)	943, 1153, 1471
AvrII	CCTAGG	2 cut(s)	1732, 1802
AxyI	CCTNAGG	1 cut(s)	1157
BaeGI	GKGCMC	1 cut(s)	1195
BamHI	GGATCC	1 cut(s)	130
BanII	GRGCYC	2 cut(s)	1708, 1724
BarI	GAAGNNNNNNTAC	2 cut(s)	815, 847
BauI	CACGAG	1 cut(s)	1707
BbsI	GAAGAC	2 cut(s)	1136, 1521
Bbv12I	GWGCWC	2 cut(s)	1195, 1724
BbvI	GCAGC	3 cut(s)	904, 1616, 1750
BccI	CCATC	4 cut(s)	233, 1310, 1463, 1828
BceAI	ACGGC	3 cut(s)	194, 1540, 1802
BciT130I	CCWGG	2 cut(s)	433, 1702
BciVI	GTATCC	1 cut(s)	551
BcoDI	GTCTC	5 cut(s)	1354, 1388, 1537, 1548, 1665
BfaI	CTAG	5 cut(s)	359, 1697, 1733, 1797, 1803
BfmI	CTRYAG	3 cut(s)	624, 741, 1485
BfoI	RGCGCY	2 cut(s)	1177, 1636
BfuAI	ACCTGC	1 cut(s)	1382
BfuI	GTATCC	1 cut(s)	551
BisI	GCNGC	4 cut(s)	918, 1605, 1631, 1764
BlnI	CCTAGG	2 cut(s)	1732, 1802
BlsI	GCNGC	4 cut(s)	919, 1606, 1632, 1765
Bme1390I	CCNGG	2 cut(s)	433, 1702
Bme18I	GGWCC	3 cut(s)	943, 1153, 1471
BmeRI	GACNNNNNGTC	1 cut(s)	1522
BmeT110I	CYCGRG	1 cut(s)	1717
BmgT120I	GGNCC	5 cut(s)	65, 201, 943, 1153, 1471
BmiI	GGNNCC	3 cut(s)	132, 202, 604
BmrFI	CCNGG	2 cut(s)	433, 1702
BmsI	GCATC	3 cut(s)	769, 1612, 1681
BpiI	GAAGAC	2 cut(s)	1136, 1521
Bpu10I	CCTNAGC	1 cut(s)	488
Bpu14I	TTCGAA	1 cut(s)	499
BpuEI	CTTGAG	3 cut(s)	1058, 1244, 1370
BsaJI	CCNNGG	8 cut(s)	332, 432, 1122, 1149, 1311, 1701, 1732, 1802
BsaWI	WCCGGW	1 cut(s)	791
BsaXI	ACNNNNNCTCC	2 cut(s)	1667, 1697
Bsc4I	CCNNNNNNNGG	5 cut(s)	184, 900, 1297, 1316, 1738
Bse1I	ACTGG	3 cut(s)	588, 718, 1265
Bse21I	CCTNAGG	1 cut(s)	1157
BseBI	CCWGG	2 cut(s)	433, 1702
BseDI	CCNNGG	8 cut(s)	332, 432, 1122, 1149, 1311, 1701, 1732, 1802
BseGI	GGATG	5 cut(s)	733, 1231, 1321, 1627, 1650
BseLI	CCNNNNNNNGG	5 cut(s)	184, 900, 1297, 1316, 1738
BseMII	CTCAG	3 cut(s)	874, 1153, 1559
BseNI	ACTGG	3 cut(s)	588, 718, 1265
BseRI	GAGGAG	1 cut(s)	1688
BseSI	GKGCMC	1 cut(s)	1195
BseXI	GCAGC	3 cut(s)	904, 1616, 1750
BseYI	CCCAGC	1 cut(s)	1536
Bsh1236I	CGCG	1 cut(s)	1000
BshFI	GGCC	6 cut(s)	67, 203, 879, 1049, 1555, 1801
BsiHKAI	GWGCWC	2 cut(s)	1195, 1724
BsiHKCI	CYCGRG	1 cut(s)	1717
BsiSI	CCGG	2 cut(s)	792, 1198
BslFI	GGGAC	1 cut(s)	861
BslI	CCNNNNNNNGG	5 cut(s)	184, 900, 1297, 1316, 1738
BsmAI	GTCTC	5 cut(s)	1354, 1388, 1537, 1548, 1665
BsmFI	GGGAC	1 cut(s)	861
BsmI	GAATGC	1 cut(s)	1326
BsnI	GGCC	6 cut(s)	67, 203, 879, 1049, 1555, 1801
BsoBI	CYCGRG	1 cut(s)	1717
Bsp119I	TTCGAA	1 cut(s)	499
Bsp1286I	GDGCHC	3 cut(s)	1195, 1708, 1724
Bsp1407I	TGTACA	1 cut(s)	817
Bsp143I	GATC	5 cut(s)	130, 166, 1069, 1413, 1429
Bsp19I	CCATGG	2 cut(s)	332, 1122
BspACI	CCGC	2 cut(s)	1630, 1639
BspANI	GGCC	6 cut(s)	67, 203, 879, 1049, 1555, 1801
BspCNI	CTCAG	3 cut(s)	873, 1152, 1558
BspFNI	CGCG	1 cut(s)	1000
BspHI	TCATGA	2 cut(s)	667, 1066
BspLI	GGNNCC	3 cut(s)	132, 202, 604
BspMI	ACCTGC	1 cut(s)	1382
BspPI	GGATC	2 cut(s)	125, 138
BspQI	GCTCTTC	1 cut(s)	1331
BspT104I	TTCGAA	1 cut(s)	499
BsrGI	TGTACA	1 cut(s)	817
BsrI	ACTGG	3 cut(s)	588, 718, 1265
BssECI	CCNNGG	8 cut(s)	332, 432, 1122, 1149, 1311, 1701, 1732, 1802
BssMI	GATC	5 cut(s)	130, 166, 1069, 1413, 1429
BssSI	CACGAG	1 cut(s)	1707
BssT1I	CCWWGG	5 cut(s)	332, 1122, 1149, 1732, 1802
Bst2BI	CACGAG	1 cut(s)	1707
Bst2UI	CCWGG	2 cut(s)	433, 1702
Bst4CI	ACNGT	5 cut(s)	683, 987, 1236, 1471, 1486
Bst6I	CTCTTC	7 cut(s)	295, 575, 1331, 1404, 1449, 1650, 1668
BstAPI	GCANNNNNTGC	1 cut(s)	1778
BstAUI	TGTACA	1 cut(s)	817
BstBI	TTCGAA	1 cut(s)	499
BstC8I	GCNNGC	4 cut(s)	283, 585, 647, 1553
BstDEI	CTNAG	6 cut(s)	179, 488, 860, 1139, 1157, 1545
BstDSI	CCRYGG	3 cut(s)	332, 1122, 1311
BstF5I	GGATG	5 cut(s)	733, 1231, 1321, 1627, 1650
BstFNI	CGCG	1 cut(s)	1000
BstH2I	RGCGCY	2 cut(s)	1177, 1636
BstHHI	GCGC	3 cut(s)	1000, 1176, 1635
BstKTI	GATC	5 cut(s)	133, 169, 1072, 1416, 1432
BstMAI	GTCTC	5 cut(s)	1354, 1388, 1537, 1548, 1665
BstMBI	GATC	5 cut(s)	130, 166, 1069, 1413, 1429
BstMWI	GCNNNNNNNGC	8 cut(s)	554, 1004, 1182, 1561, 1728, 1769, 1778, 1825
BstNI	CCWGG	2 cut(s)	433, 1702
BstSCI	CCNGG	2 cut(s)	431, 1700
BstSFI	CTRYAG	3 cut(s)	624, 741, 1485
BstSLI	GKGCMC	1 cut(s)	1195
BstUI	CGCG	1 cut(s)	1000
BstV1I	GCAGC	3 cut(s)	904, 1616, 1750
BstV2I	GAAGAC	2 cut(s)	1136, 1521
BstX2I	RGATCY	1 cut(s)	130
BstXI	CCANNNNNNTGG	1 cut(s)	439
BstYI	RGATCY	1 cut(s)	130
Bsu36I	CCTNAGG	1 cut(s)	1157
BsuI	GTATCC	1 cut(s)	551
BsuRI	GGCC	6 cut(s)	67, 203, 879, 1049, 1555, 1801
BtgI	CCRYGG	3 cut(s)	332, 1122, 1311
BtgZI	GCGATG	1 cut(s)	1259
BtsCI	GGATG	5 cut(s)	733, 1231, 1321, 1627, 1650
BtsI	GCAGTG	1 cut(s)	1103
BtsIMutI	CAGTG	2 cut(s)	813, 1103
BveI	ACCTGC	1 cut(s)	1382
Cac8I	GCNNGC	4 cut(s)	283, 585, 647, 1553
CaiI	CAGNNNCTG	1 cut(s)	1829
CciI	TCATGA	2 cut(s)	667, 1066
CfoI	GCGC	3 cut(s)	1000, 1176, 1635
Cfr13I	GGNCC	5 cut(s)	65, 201, 943, 1153, 1471
Csp6I	GTAC	3 cut(s)	613, 818, 891
CviAII	CATG	6 cut(s)	333, 558, 593, 668, 1067, 1123
CviQI	GTAC	3 cut(s)	613, 818, 891
DdeI	CTNAG	6 cut(s)	179, 488, 860, 1139, 1157, 1545
DpnI	GATC	5 cut(s)	132, 168, 1071, 1415, 1431
DpnII	GATC	5 cut(s)	130, 166, 1069, 1413, 1429
DraI	TTTAAA	1 cut(s)	1506
DraIII	CACNNNGTG	1 cut(s)	1778
DriI	GACNNNNNGTC	1 cut(s)	1522
Eam1104I	CTCTTC	7 cut(s)	295, 575, 1331, 1404, 1449, 1650, 1668
Eam1105I	GACNNNNNGTC	1 cut(s)	1522
EarI	CTCTTC	7 cut(s)	295, 575, 1331, 1404, 1449, 1650, 1668
Ecl136II	GAGCTC	1 cut(s)	1722
Eco130I	CCWWGG	5 cut(s)	332, 1122, 1149, 1732, 1802
Eco147I	AGGCCT	2 cut(s)	879, 1801
Eco24I	GRGCYC	2 cut(s)	1708, 1724
Eco47I	GGWCC	3 cut(s)	943, 1153, 1471
Eco47III	AGCGCT	1 cut(s)	1175
Eco53kI	GAGCTC	1 cut(s)	1722
Eco81I	CCTNAGG	1 cut(s)	1157
Eco88I	CYCGRG	1 cut(s)	1717
EcoICRI	GAGCTC	1 cut(s)	1722
EcoO109I	RGGNCCY	1 cut(s)	1153
EcoRII	CCWGG	2 cut(s)	431, 1700
EcoT14I	CCWWGG	5 cut(s)	332, 1122, 1149, 1732, 1802
EcoT38I	GRGCYC	2 cut(s)	1708, 1724
ErhI	CCWWGG	5 cut(s)	332, 1122, 1149, 1732, 1802
FaeI	CATG	6 cut(s)	336, 561, 596, 671, 1070, 1126
FalI	AAGNNNNNCTT	6 cut(s)	1271, 1303, 1553, 1585, 1647, 1679
FaqI	GGGAC	1 cut(s)	861
FatI	CATG	6 cut(s)	332, 557, 592, 667, 1066, 1122
FauNDI	CATATG	1 cut(s)	1379
Fnu4HI	GCNGC	4 cut(s)	918, 1605, 1631, 1764
FokI	GGATG	5 cut(s)	740, 1238, 1328, 1634, 1657
FriOI	GRGCYC	2 cut(s)	1708, 1724
Fsp4HI	GCNGC	4 cut(s)	918, 1605, 1631, 1764
FspBI	CTAG	5 cut(s)	359, 1697, 1733, 1797, 1803
GlaI	GCGC	3 cut(s)	999, 1175, 1634
GluI	GCNGC	4 cut(s)	918, 1605, 1631, 1764
GsaI	CCCAGC	1 cut(s)	1540
HaeII	RGCGCY	2 cut(s)	1177, 1636
HaeIII	GGCC	6 cut(s)	67, 203, 879, 1049, 1555, 1801
HapII	CCGG	2 cut(s)	792, 1198
HhaI	GCGC	3 cut(s)	1000, 1176, 1635
Hin1II	CATG	6 cut(s)	336, 561, 596, 671, 1070, 1126
Hin6I	GCGC	3 cut(s)	998, 1174, 1633
HinP1I	GCGC	3 cut(s)	998, 1174, 1633
HincII	GTYRAC	1 cut(s)	364
HindII	GTYRAC	1 cut(s)	364
HindIII	AAGCTT	2 cut(s)	1285, 1649
HpaII	CCGG	2 cut(s)	792, 1198
HphI	GGTGA	3 cut(s)	1406, 1418, 1431
Hpy166II	GTNNAC	3 cut(s)	364, 662, 1193
Hpy188I	TCNGA	2 cut(s)	1668, 1825
Hpy188III	TCNNGA	7 cut(s)	128, 302, 668, 1067, 1075, 1298, 1427
Hpy8I	GTNNAC	3 cut(s)	364, 662, 1193
Hpy99I	CGWCG	1 cut(s)	167
HpyAV	CCTTC	4 cut(s)	794, 1015, 1060, 1507
HpyCH4III	ACNGT	5 cut(s)	683, 987, 1236, 1471, 1486
HpyF10VI	GCNNNNNNNGC	8 cut(s)	554, 1004, 1182, 1561, 1728, 1769, 1778, 1825
HpyF3I	CTNAG	6 cut(s)	179, 488, 860, 1139, 1157, 1545
Hsp92II	CATG	6 cut(s)	336, 561, 596, 671, 1070, 1126
HspAI	GCGC	3 cut(s)	998, 1174, 1633
Kzo9I	GATC	5 cut(s)	130, 166, 1069, 1413, 1429
LguI	GCTCTTC	1 cut(s)	1331
LmnI	GCTCC	5 cut(s)	512, 602, 1024, 1093, 1727
Lsp1109I	GCAGC	3 cut(s)	904, 1616, 1750
LweI	GCATC	3 cut(s)	769, 1612, 1681
MaeI	CTAG	5 cut(s)	359, 1697, 1733, 1797, 1803
MaeIII	GTNAC	3 cut(s)	523, 1394, 1437
MalI	GATC	5 cut(s)	132, 168, 1071, 1415, 1431
MboI	GATC	5 cut(s)	130, 166, 1069, 1413, 1429
MfeI	CAATTG	1 cut(s)	172
MflI	RGATCY	1 cut(s)	130
MhlI	GDGCHC	3 cut(s)	1195, 1708, 1724
MluCI	AATT	9 cut(s)	56, 172, 194, 369, 375, 399, 753, 930, 1130
MlyI	GAGTC	4 cut(s)	97, 725, 740, 1667
MmeI	TCCRAC	2 cut(s)	580, 1218
MseI	TTAA	3 cut(s)	159, 398, 1505
MslI	CAYNNNNRTG	1 cut(s)	669
MspI	CCGG	2 cut(s)	792, 1198
MspR9I	CCNGG	2 cut(s)	433, 1702
MunI	CAATTG	1 cut(s)	172
Mva1269I	GAATGC	1 cut(s)	1326
MvaI	CCWGG	2 cut(s)	433, 1702
MvnI	CGCG	1 cut(s)	1000
MwoI	GCNNNNNNNGC	8 cut(s)	554, 1004, 1182, 1561, 1728, 1769, 1778, 1825
NcoI	CCATGG	2 cut(s)	332, 1122
NdeI	CATATG	1 cut(s)	1379
NdeII	GATC	5 cut(s)	130, 166, 1069, 1413, 1429
NlaIII	CATG	6 cut(s)	336, 561, 596, 671, 1070, 1126
NlaIV	GGNNCC	3 cut(s)	132, 202, 604
NmuCI	GTSAC	2 cut(s)	1394, 1437
NspV	TTCGAA	1 cut(s)	499
PaeR7I	CTCGAG	1 cut(s)	1717
PagI	TCATGA	2 cut(s)	667, 1066
PaqCI	CACCTGC	1 cut(s)	1382
PceI	AGGCCT	2 cut(s)	879, 1801
PciSI	GCTCTTC	1 cut(s)	1331
PctI	GAATGC	1 cut(s)	1326
PfeI	GAWTC	7 cut(s)	307, 319, 428, 443, 501, 803, 1493
PkrI	GCNGC	4 cut(s)	919, 1606, 1632, 1765
PleI	GAGTC	4 cut(s)	96, 725, 740, 1666
PpsI	GAGTC	4 cut(s)	96, 725, 740, 1666
PpuMI	RGGWCCY	1 cut(s)	1153
Psp124BI	GAGCTC	1 cut(s)	1724
Psp5II	RGGWCCY	1 cut(s)	1153
Psp6I	CCWGG	2 cut(s)	431, 1700
PspFI	CCCAGC	1 cut(s)	1536
PspGI	CCWGG	2 cut(s)	431, 1700
PspN4I	GGNNCC	3 cut(s)	132, 202, 604
PspPI	GGNCC	5 cut(s)	65, 201, 943, 1153, 1471
PspPPI	RGGWCCY	1 cut(s)	1153
PspXI	VCTCGAGB	1 cut(s)	1717
PstNI	CAGNNNCTG	1 cut(s)	1829
PsuI	RGATCY	1 cut(s)	130
RsaI	GTAC	3 cut(s)	614, 819, 892
RsaNI	GTAC	3 cut(s)	613, 818, 891
RseI	CAYNNNNRTG	1 cut(s)	669
SacI	GAGCTC	1 cut(s)	1724
SapI	GCTCTTC	1 cut(s)	1331
SaqAI	TTAA	3 cut(s)	159, 398, 1505
SatI	GCNGC	4 cut(s)	918, 1605, 1631, 1764
Sau3AI	GATC	5 cut(s)	130, 166, 1069, 1413, 1429
Sau96I	GGNCC	5 cut(s)	65, 201, 943, 1153, 1471
SchI	GAGTC	4 cut(s)	97, 725, 740, 1667
ScrFI	CCNGG	2 cut(s)	433, 1702
SduI	GDGCHC	3 cut(s)	1195, 1708, 1724
SfaNI	GCATC	3 cut(s)	769, 1612, 1681
SfcI	CTRYAG	3 cut(s)	624, 741, 1485
Sfr274I	CTCGAG	1 cut(s)	1717
SfuI	TTCGAA	1 cut(s)	499
SinI	GGWCC	3 cut(s)	943, 1153, 1471
SlaI	CTCGAG	1 cut(s)	1717
SmiMI	CAYNNNNRTG	1 cut(s)	669
SmlI	CTYRAG	4 cut(s)	1073, 1259, 1385, 1717
SmoI	CTYRAG	4 cut(s)	1073, 1259, 1385, 1717
Sse9I	AATT	9 cut(s)	56, 172, 194, 369, 375, 399, 753, 930, 1130
SseBI	AGGCCT	2 cut(s)	879, 1801
SsiI	CCGC	2 cut(s)	1630, 1639
SspI	AATATT	2 cut(s)	771, 1040
SspMI	CTAG	5 cut(s)	359, 1697, 1733, 1797, 1803
SstI	GAGCTC	1 cut(s)	1724
StuI	AGGCCT	2 cut(s)	879, 1801
StyD4I	CCNGG	2 cut(s)	431, 1700
StyI	CCWWGG	5 cut(s)	332, 1122, 1149, 1732, 1802
TaaI	ACNGT	5 cut(s)	683, 987, 1236, 1471, 1486
TaqI	TCGA	2 cut(s)	499, 1718
TaqII	GACCGA	2 cut(s)	860, 1729
TasI	AATT	9 cut(s)	56, 172, 194, 369, 375, 399, 753, 930, 1130
TatI	WGTACW	1 cut(s)	817
TauI	GCSGC	1 cut(s)	1633
TfiI	GAWTC	7 cut(s)	307, 319, 428, 443, 501, 803, 1493
Tru1I	TTAA	3 cut(s)	159, 398, 1505
Tru9I	TTAA	3 cut(s)	159, 398, 1505
TscAI	CASTG	2 cut(s)	813, 1103
TseFI	GTSAC	2 cut(s)	1394, 1437
TseI	GCWGC	3 cut(s)	917, 1604, 1763
Tsp45I	GTSAC	2 cut(s)	1394, 1437
TspDTI	ATGAA	7 cut(s)	239, 454, 763, 942, 1318, 1436, 1661
TspGWI	ACGGA	1 cut(s)	209
TspRI	CASTG	2 cut(s)	813, 1103
VneI	GTGCAC	1 cut(s)	1191
VpaK11BI	GGWCC	3 cut(s)	943, 1153, 1471
XapI	RAATTY	2 cut(s)	753, 1130
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1486
XhoI	CTCGAG	1 cut(s)	1717
XmaJI	CCTAGG	2 cut(s)	1732, 1802
XspI	CTAG	5 cut(s)	359, 1697, 1733, 1797, 1803

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.