Prupe.1G236600_v2.0.a1

Vinorine synthase-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
25060625 .. 25061959
1335 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G236600.1

Sequence Viewer

Length: 1335 bp
ATGAAGATTGAGGTTGAAGTGATCTCCAAGGAGATTATCAAGCCATCATCTCCAACCCCTGACCATCTTCGCTATTTGCAGCTCTCTTTTCTTGATCAATTAGCTCCCCCAGTCTATAACCCTTTTGTCCTCTTTTATGAATTCAATGGCGAGACACAGCCCAAAATCACTGAAATATCCAGCCATCTCAAAAAGTCCTTGGCCGACGTCTTAACCCTTTTCTACCCGCTAGCCGGTCGAGTCTTCAAACAAAACCATTTTGTTGATTGCAATGATGAGGGCGTTCCCTATGTTGAAGCACAAGTCAAGTGCTCACTTTCTGATTTTCTCAACAATCCAATTCCTGATGAACTCAAGAAGTTCATCCCATTGGAGCTAGACGATATTGCCAATGAACTTGCTCTAGGGGTTCAGCTCAACATATTTGAATGCGGAGGATTTGCTATTGGTCAATGTATTTCTCACAAGATTGCAGATGGATTGTCTCATTTCATGTTCAGTAAAACTTGGGCTGCCACAGCCCTGGGAGATGAACCCCGAATAGAACTTCCAGAGTTTGTTTCAGCAGCCCTCTTCCCTCCAAAGGAGTTCAATATTGGATATGATGCAGGCATTGGCATCACAAAGAACAGAGTAACAAAGAGGTTTGTGTTTGATTCCTCTAAGATAGAGAGTCTCAAAACCAAATATAAAGGGAAGGACAGTTCAGGTTTTAACTCTCGAGTTTTGAGTTTGGAAAACGAAAAAGGACCCTCACGAGTTGAGGCCTTATCTGCTTTCATATGGAGTCGATTTGTGGCCACCACAAAGGATGATGCAGGACATGATGAGAAGCACTACATAGTGCTTCATTCTGTGAACCTGCGACCGAGGTTTGATCCACCACTGCCACAACATTGTTTCGGAAATTTTTACCGTGGTGCCATGACAGCTCCATTCTTATTAAGTAGTGGGGAAGAATGCAATTATGGCGCAGTGATCATGAAGGTGCGAGATGAAATAAACAAGATCAACAATGACTATATCAAAAGACTACAACAGGGCAATGAGCACTTGAGTGTTCTCCAAGAAAGTAGTGATAATGTTATCAGAGGAGAGGTGGATACATTTAGCTTCAGTAGTTTTTGCAGATTTCCTGTGTATGATAATGATTTTGGTTGGGGGAGGCCCGTGTGGGTGAGCTCGCCGCCATTGACATTCAAGAACCTGGTGGTTTTCATGGACACCAAAGAGGCTGATGGAATTGAGGCATACATTAGTTTGGAGGAGGAAGTGATGGCTAAATTTGAATGTGATACCGAGTTCTTGGCTTGTGTTTCTCTAAGTGGTTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

445

Amino Acids

49.99

Weight (kDa)

5.17

Isoelectric Point (pI)

42.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000622)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g24710 FvH4_4g24720 FvH4_4g24770 FvH4_4g24771 FvH4_4g24772 FvH4_5g39380
malus_domestica MD10G1199500.v1.1 MD13G1109100.v1.1 MD13G1109200.v1.1 MD13G1114400.v1.1 MD13G1114800.v1.1 MD16G1108800.v1.1
prunus_persica Prupe.1G235900_v2.0.a1 Prupe.1G236600_v2.0.a1 Prupe.1G236700_v2.0.a1 Prupe.1G236800_v2.0.a1 Prupe.4G142000_v2.0.a1
pyrus_communis pycom10g17180 pycom13g09460 pycom13g09930 pycom13g09940
rosa_chinensis RchiOBHm_Chr3g0490281 RchiOBHm_Chr3g0490291 RchiOBHm_Chr3g0490301 RchiOBHm_Chr4g0417441 RchiOBHm_Chr4g0417461 RchiOBHm_Chr4g0431811 RchiOBHm_Chr4g0431821 RchiOBHm_Chr4g0431851
rosa_laevigata RLG00000006882 RLG00000006886 RLG00000006887 RLG00000007905 RLG00000007911 RLG00000007913 RLG00000029538
rosa_multiflora Rmu_sc0001459.1_g000008 Rmu_sc0001459.1_g000011 Rmu_sc0002489.1_g000020 Rmu_sc0002489.1_g000024 Rmu_sc0002489.1_g000027 Rmu_sc0002489.1_g000028 Rmu_sc0002489.1_g000029 Rmu_sc0004142.1_g000001 Rmu_sc0004142.1_g000024 Rmu_sc0011237.1_g000018 Rmu_sc0031439.1_g000001 Rmu_sc0031677.1_g000001 Rmu_ssc0000361.1_g000005
rosa_roxburghii Rroxscaffold_3G00262760 Rroxscaffold_4G00317310 Rroxscaffold_5G00361150 Rroxscaffold_5G00373190 Rroxscaffold_5G00373210 Rroxscaffold_5G00373220 Rroxscaffold_5G00373240
rosa_rugosa Rorug01G0111100 Rorug04G0252400 Rorug04G0252400 Rorug04G0252400 Rorug04G0252600
rosa_samantha Rh1BG102300 Rh3AG292200 Rh3AG292300 Rh4AG309100 Rh4AG309300 Rh4AG309500 Rh6BG200900
rosa_wichuraiana Rw0G002990 Rw0G003000 Rw0G019170 Rw3G025890 Rw3G025900 Rw4G017830 Rw4G026810 Rw4G026870 Rw4G026880 Rw4G026920 Rw6G017190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 210
Acc36I ACCTGC 1 cut(s) 870
AccB1I GGYRCC 1 cut(s) 920
AciI CCGC 3 cut(s) 227, 432, 1187
AclWI GGATC 1 cut(s) 872
AcoI YGGCCR 2 cut(s) 201, 798
AcsI RAATTY 3 cut(s) 140, 907, 1283
AcuI CTGAAG 1 cut(s) 1099
AcyI GRCGYC 1 cut(s) 207
AfiI CCNNNNNNNGG 2 cut(s) 233, 583
AgsI TTSAA 8 cut(s) 17, 145, 247, 296, 428, 592, 1201, 1289
AjnI CCWGG 2 cut(s) 522, 1206
AleI CACNNNNGTG 1 cut(s) 1056
AloI GAACNNNNNNTCC 2 cut(s) 688, 720
AluBI AGCT 7 cut(s) 82, 104, 376, 415, 932, 1113, 1182
AluI AGCT 7 cut(s) 82, 104, 376, 415, 932, 1113, 1182
Alw21I GWGCWC 3 cut(s) 314, 1053, 1184
Alw26I GTCTC 3 cut(s) 146, 489, 680
AlwI GGATC 1 cut(s) 872
Ama87I CYCGRG 1 cut(s) 720
AoxI GGCC 4 cut(s) 201, 765, 798, 1166
ApeKI GCWGC 3 cut(s) 79, 512, 566
ApoI RAATTY 3 cut(s) 140, 907, 1283
AspLEI GCGC 1 cut(s) 974
AspS9I GGNCC 2 cut(s) 749, 1167
AsuHPI GGTGA 1 cut(s) 1189
AsuNHI GCTAGC 1 cut(s) 229
AvaI CYCGRG 1 cut(s) 720
AvaII GGWCC 1 cut(s) 749
BalI TGGCCA 1 cut(s) 800
BanI GGYRCC 1 cut(s) 920
BanII GRGCYC 1 cut(s) 1184
BauI CACGAG 1 cut(s) 756
BbsI GAAGAC 1 cut(s) 235
Bbv12I GWGCWC 3 cut(s) 314, 1053, 1184
BbvI GCAGC 3 cut(s) 91, 499, 578
BccI CCATC 6 cut(s) 52, 72, 192, 470, 1232, 1270
BciT130I CCWGG 2 cut(s) 524, 1208
BciVI GTATCC 1 cut(s) 1096
BclI TGATCA 2 cut(s) 94, 978
BcoDI GTCTC 3 cut(s) 146, 489, 680
BfaI CTAG 3 cut(s) 230, 377, 404
BfuAI ACCTGC 1 cut(s) 870
BfuI GTATCC 1 cut(s) 1096
BisI GCNGC 4 cut(s) 80, 513, 567, 1187
BlsI GCNGC 4 cut(s) 81, 514, 568, 1188
Bme1390I CCNGG 2 cut(s) 524, 1208
Bme18I GGWCC 1 cut(s) 749
BmeT110I CYCGRG 1 cut(s) 720
BmgT120I GGNCC 2 cut(s) 749, 1167
BmiI GGNNCC 2 cut(s) 751, 922
BmrFI CCNGG 2 cut(s) 524, 1208
BmrI ACTGGG 1 cut(s) 104
BmsI GCATC 3 cut(s) 595, 627, 805
BmtI GCTAGC 1 cut(s) 233
BmuI ACTGGG 1 cut(s) 104
BpiI GAAGAC 1 cut(s) 235
BpuEI CTTGAG 2 cut(s) 338, 1075
BsaHI GRCGYC 1 cut(s) 207
BsaJI CCNNGG 6 cut(s) 27, 198, 522, 523, 869, 916
Bsc4I CCNNNNNNNGG 2 cut(s) 233, 583
Bse118I RCCGGY 1 cut(s) 233
Bse1I ACTGG 1 cut(s) 110
Bse3DI GCAATG 2 cut(s) 277, 1051
BseBI CCWGG 2 cut(s) 524, 1208
BseDI CCNNGG 6 cut(s) 27, 198, 522, 523, 869, 916
BseGI GGATG 2 cut(s) 363, 817
BseLI CCNNNNNNNGG 2 cut(s) 233, 583
BseMI GCAATG 2 cut(s) 277, 1051
BseNI ACTGG 1 cut(s) 110
BseRI GAGGAG 2 cut(s) 1107, 1280
BseXI GCAGC 3 cut(s) 91, 499, 578
Bsh1285I CGRYCG 2 cut(s) 238, 869
BshFI GGCC 4 cut(s) 203, 767, 800, 1168
BshNI GGYRCC 1 cut(s) 920
BsiEI CGRYCG 2 cut(s) 238, 869
BsiHKAI GWGCWC 3 cut(s) 314, 1053, 1184
BsiHKCI CYCGRG 1 cut(s) 720
BsiSI CCGG 1 cut(s) 234
BslI CCNNNNNNNGG 2 cut(s) 233, 583
BsmAI GTCTC 3 cut(s) 146, 489, 680
BsmI GAATGC 2 cut(s) 434, 965
BsnI GGCC 4 cut(s) 203, 767, 800, 1168
BsoBI CYCGRG 1 cut(s) 720
Bsp1286I GDGCHC 3 cut(s) 314, 1053, 1184
Bsp143I GATC 5 cut(s) 21, 94, 877, 978, 1008
BspACI CCGC 3 cut(s) 227, 432, 1187
BspANI GGCC 4 cut(s) 203, 767, 800, 1168
BspHI TCATGA 1 cut(s) 981
BspLI GGNNCC 2 cut(s) 751, 922
BspMI ACCTGC 1 cut(s) 870
BspOI GCTAGC 1 cut(s) 233
BspPI GGATC 1 cut(s) 872
BspT107I GGYRCC 1 cut(s) 920
BsrDI GCAATG 2 cut(s) 277, 1051
BsrFI RCCGGY 1 cut(s) 233
BsrI ACTGG 1 cut(s) 110
BssAI RCCGGY 1 cut(s) 233
BssECI CCNNGG 6 cut(s) 27, 198, 522, 523, 869, 916
BssMI GATC 5 cut(s) 21, 94, 877, 978, 1008
BssNI GRCGYC 1 cut(s) 207
BssSI CACGAG 1 cut(s) 756
BssT1I CCWWGG 2 cut(s) 27, 198
Bst2BI CACGAG 1 cut(s) 756
Bst2UI CCWGG 2 cut(s) 524, 1208
Bst4CI ACNGT 2 cut(s) 704, 917
Bst6I CTCTTC 1 cut(s) 578
BstACI GRCGYC 1 cut(s) 207
BstC8I GCNNGC 3 cut(s) 231, 610, 1184
BstDEI CTNAG 2 cut(s) 663, 1322
BstDSI CCRYGG 1 cut(s) 916
BstF5I GGATG 2 cut(s) 363, 817
BstHHI GCGC 1 cut(s) 974
BstKTI GATC 5 cut(s) 24, 97, 880, 981, 1011
BstMAI GTCTC 3 cut(s) 146, 489, 680
BstMBI GATC 5 cut(s) 21, 94, 877, 978, 1008
BstMCI CGRYCG 2 cut(s) 238, 869
BstMWI GCNNNNNNNGC 4 cut(s) 518, 773, 929, 969
BstNI CCWGG 2 cut(s) 524, 1208
BstSCI CCNGG 2 cut(s) 522, 1206
BstV1I GCAGC 3 cut(s) 91, 499, 578
BstV2I GAAGAC 1 cut(s) 235
BstXI CCANNNNNNTGG 1 cut(s) 523
BsuI GTATCC 1 cut(s) 1096
BsuRI GGCC 4 cut(s) 203, 767, 800, 1168
BtgI CCRYGG 1 cut(s) 916
BtsCI GGATG 2 cut(s) 363, 817
BtsI GCAGTG 2 cut(s) 884, 981
BtsIMutI CAGTG 3 cut(s) 168, 884, 981
BveI ACCTGC 1 cut(s) 870
Cac8I GCNNGC 3 cut(s) 231, 610, 1184
CciI TCATGA 1 cut(s) 981
CfoI GCGC 1 cut(s) 974
Cfr10I RCCGGY 1 cut(s) 233
Cfr13I GGNCC 2 cut(s) 749, 1167
CsiI ACCWGGT 1 cut(s) 1206
CviAII CATG 5 cut(s) 493, 824, 925, 982, 1219
DdeI CTNAG 2 cut(s) 663, 1322
DpnI GATC 5 cut(s) 23, 96, 879, 980, 1010
DpnII GATC 5 cut(s) 21, 94, 877, 978, 1008
EaeI YGGCCR 2 cut(s) 201, 798
Eam1104I CTCTTC 1 cut(s) 578
EarI CTCTTC 1 cut(s) 578
Ecl136II GAGCTC 1 cut(s) 1182
Eco130I CCWWGG 2 cut(s) 27, 198
Eco147I AGGCCT 1 cut(s) 767
Eco24I GRGCYC 1 cut(s) 1184
Eco47I GGWCC 1 cut(s) 749
Eco53kI GAGCTC 1 cut(s) 1182
Eco57I CTGAAG 1 cut(s) 1099
Eco88I CYCGRG 1 cut(s) 720
EcoICRI GAGCTC 1 cut(s) 1182
EcoO109I RGGNCCY 1 cut(s) 749
EcoRI GAATTC 1 cut(s) 140
EcoRII CCWGG 2 cut(s) 522, 1206
EcoT14I CCWWGG 2 cut(s) 27, 198
EcoT38I GRGCYC 1 cut(s) 1184
ErhI CCWWGG 2 cut(s) 27, 198
FaeI CATG 5 cut(s) 496, 827, 928, 985, 1222
FatI CATG 5 cut(s) 492, 823, 924, 981, 1218
FauI CCCGC 1 cut(s) 234
FauNDI CATATG 1 cut(s) 782
FbaI TGATCA 2 cut(s) 94, 978
Fnu4HI GCNGC 4 cut(s) 80, 513, 567, 1187
FokI GGATG 2 cut(s) 350, 824
FriOI GRGCYC 1 cut(s) 1184
Fsp4HI GCNGC 4 cut(s) 80, 513, 567, 1187
FspBI CTAG 3 cut(s) 230, 377, 404
GlaI GCGC 1 cut(s) 973
GluI GCNGC 4 cut(s) 80, 513, 567, 1187
HaeIII GGCC 4 cut(s) 203, 767, 800, 1168
HapII CCGG 1 cut(s) 234
HhaI GCGC 1 cut(s) 974
Hin1I GRCGYC 1 cut(s) 207
Hin1II CATG 5 cut(s) 496, 827, 928, 985, 1222
Hin6I GCGC 1 cut(s) 972
HinP1I GCGC 1 cut(s) 972
HinfI GANTC 4 cut(s) 240, 656, 673, 787
HpaII CCGG 1 cut(s) 234
HphI GGTGA 1 cut(s) 1189
Hpy166II GTNNAC 1 cut(s) 859
Hpy188I TCNGA 3 cut(s) 322, 905, 1091
Hpy188III TCNNGA 8 cut(s) 92, 344, 355, 551, 720, 756, 982, 1201
Hpy8I GTNNAC 1 cut(s) 859
Hpy99I CGWCG 1 cut(s) 209
HpyAV CCTTC 2 cut(s) 691, 979
HpyCH4III ACNGT 2 cut(s) 704, 917
HpyCH4IV ACGT 1 cut(s) 207
HpyCH4V TGCA 7 cut(s) 79, 270, 473, 608, 818, 963, 1128
HpyF10VI GCNNNNNNNGC 4 cut(s) 518, 773, 929, 969
HpyF3I CTNAG 2 cut(s) 663, 1322
HpySE526I ACGT 1 cut(s) 207
Hsp92I GRCGYC 1 cut(s) 207
Hsp92II CATG 5 cut(s) 496, 827, 928, 985, 1222
HspAI GCGC 1 cut(s) 972
Ksp22I TGATCA 2 cut(s) 94, 978
Kzo9I GATC 5 cut(s) 21, 94, 877, 978, 1008
LmnI GCTCC 3 cut(s) 109, 373, 937
Lsp1109I GCAGC 3 cut(s) 91, 499, 578
LweI GCATC 3 cut(s) 595, 627, 805
MabI ACCWGGT 1 cut(s) 1206
MaeI CTAG 3 cut(s) 230, 377, 404
MaeII ACGT 1 cut(s) 207
MaeIII GTNAC 1 cut(s) 634
MalI GATC 5 cut(s) 23, 96, 879, 980, 1010
MboI GATC 5 cut(s) 21, 94, 877, 978, 1008
MboII GAAGA 5 cut(s) 16, 59, 235, 565, 968
MhlI GDGCHC 3 cut(s) 314, 1053, 1184
MlsI TGGCCA 1 cut(s) 800
MluCI AATT 7 cut(s) 98, 140, 339, 907, 964, 1242, 1283
MluNI TGGCCA 1 cut(s) 800
MlyI GAGTC 3 cut(s) 249, 682, 796
MmeI TCCRAC 1 cut(s) 77
Mox20I TGGCCA 1 cut(s) 800
MscI TGGCCA 1 cut(s) 800
MseI TTAA 3 cut(s) 212, 714, 944
MslI CAYNNNNRTG 2 cut(s) 986, 1056
Msp20I TGGCCA 1 cut(s) 800
MspI CCGG 1 cut(s) 234
MspR9I CCNGG 2 cut(s) 524, 1208
Mva1269I GAATGC 2 cut(s) 434, 965
MvaI CCWGG 2 cut(s) 524, 1208
MwoI GCNNNNNNNGC 4 cut(s) 518, 773, 929, 969
NdeI CATATG 1 cut(s) 782
NdeII GATC 5 cut(s) 21, 94, 877, 978, 1008
NheI GCTAGC 1 cut(s) 229
NlaIII CATG 5 cut(s) 496, 827, 928, 985, 1222
NlaIV GGNNCC 2 cut(s) 751, 922
OliI CACNNNNGTG 1 cut(s) 1056
PaeR7I CTCGAG 1 cut(s) 720
PagI TCATGA 1 cut(s) 981
PasI CCCWGGG 1 cut(s) 523
PceI AGGCCT 1 cut(s) 767
PctI GAATGC 2 cut(s) 434, 965
PfeI GAWTC 1 cut(s) 656
PkrI GCNGC 4 cut(s) 81, 514, 568, 1188
PleI GAGTC 3 cut(s) 248, 681, 795
PpsI GAGTC 3 cut(s) 248, 681, 795
PpuMI RGGWCCY 1 cut(s) 749
Psp124BI GAGCTC 1 cut(s) 1184
Psp5II RGGWCCY 1 cut(s) 749
Psp6I CCWGG 2 cut(s) 522, 1206
PspGI CCWGG 2 cut(s) 522, 1206
PspN4I GGNNCC 2 cut(s) 751, 922
PspPI GGNCC 2 cut(s) 749, 1167
PspPPI RGGWCCY 1 cut(s) 749
RseI CAYNNNNRTG 2 cut(s) 986, 1056
SacI GAGCTC 1 cut(s) 1184
SaqAI TTAA 3 cut(s) 212, 714, 944
SatI GCNGC 4 cut(s) 80, 513, 567, 1187
Sau3AI GATC 5 cut(s) 21, 94, 877, 978, 1008
Sau96I GGNCC 2 cut(s) 749, 1167
SchI GAGTC 3 cut(s) 249, 682, 796
ScrFI CCNGG 2 cut(s) 524, 1208
SduI GDGCHC 3 cut(s) 314, 1053, 1184
SexAI ACCWGGT 1 cut(s) 1206
SfaNI GCATC 3 cut(s) 595, 627, 805
Sfr274I CTCGAG 1 cut(s) 720
SinI GGWCC 1 cut(s) 749
SlaI CTCGAG 1 cut(s) 720
SmiMI CAYNNNNRTG 2 cut(s) 986, 1056
SmlI CTYRAG 3 cut(s) 353, 720, 1054
SmoI CTYRAG 3 cut(s) 353, 720, 1054
Sse9I AATT 7 cut(s) 98, 140, 339, 907, 964, 1242, 1283
SseBI AGGCCT 1 cut(s) 767
SsiI CCGC 3 cut(s) 227, 432, 1187
SspI AATATT 1 cut(s) 595
SspMI CTAG 3 cut(s) 230, 377, 404
SstI GAGCTC 1 cut(s) 1184
StuI AGGCCT 1 cut(s) 767
StyD4I CCNGG 2 cut(s) 522, 1206
StyI CCWWGG 2 cut(s) 27, 198
TaaI ACNGT 2 cut(s) 704, 917
TaiI ACGT 1 cut(s) 210
TaqI TCGA 3 cut(s) 238, 721, 790
TaqII GACCGA 1 cut(s) 883
TasI AATT 7 cut(s) 98, 140, 339, 907, 964, 1242, 1283
TauI GCSGC 1 cut(s) 1189
TfiI GAWTC 1 cut(s) 656
Tru1I TTAA 3 cut(s) 212, 714, 944
Tru9I TTAA 3 cut(s) 212, 714, 944
TscAI CASTG 3 cut(s) 175, 891, 981
TseI GCWGC 3 cut(s) 79, 512, 566
TspRI CASTG 3 cut(s) 175, 891, 981
VpaK11BI GGWCC 1 cut(s) 749
XapI RAATTY 3 cut(s) 140, 907, 1283
XhoI CTCGAG 1 cut(s) 720
XspI CTAG 3 cut(s) 230, 377, 404
ZraI GACGTC 1 cut(s) 208
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.