ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 538 |
| AciI | CCGC | 1 cut(s) | 529 |
| AcsI | RAATTY | 5 cut(s) | 64, 84, 147, 237, 361 |
| AfaI | GTAC | 2 cut(s) | 113, 456 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 348 |
| AgsI | TTSAA | 1 cut(s) | 311 |
| AluBI | AGCT | 1 cut(s) | 286 |
| AluI | AGCT | 1 cut(s) | 286 |
| Alw26I | GTCTC | 1 cut(s) | 504 |
| AoxI | GGCC | 1 cut(s) | 294 |
| ApoI | RAATTY | 5 cut(s) | 64, 84, 147, 237, 361 |
| AsuHPI | GGTGA | 1 cut(s) | 16 |
| BanII | GRGCYC | 1 cut(s) | 52 |
| BbsI | GAAGAC | 1 cut(s) | 262 |
| BccI | CCATC | 1 cut(s) | 128 |
| BclI | TGATCA | 1 cut(s) | 195 |
| BcoDI | GTCTC | 1 cut(s) | 504 |
| BmiI | GGNNCC | 1 cut(s) | 93 |
| BpiI | GAAGAC | 1 cut(s) | 262 |
| BpuEI | CTTGAG | 3 cut(s) | 189, 266, 388 |
| Bsa29I | ATCGAT | 1 cut(s) | 101 |
| BsaI | GGTCTC | 1 cut(s) | 504 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 503, 533 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 348 |
| BseCI | ATCGAT | 1 cut(s) | 101 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 348 |
| BseYI | CCCAGC | 1 cut(s) | 405 |
| BshFI | GGCC | 1 cut(s) | 296 |
| BshVI | ATCGAT | 1 cut(s) | 101 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 348 |
| BsmAI | GTCTC | 1 cut(s) | 504 |
| BsnI | GGCC | 1 cut(s) | 296 |
| Bso31I | GGTCTC | 1 cut(s) | 504 |
| Bsp1286I | GDGCHC | 1 cut(s) | 52 |
| Bsp143I | GATC | 2 cut(s) | 102, 195 |
| BspACI | CCGC | 1 cut(s) | 529 |
| BspANI | GGCC | 1 cut(s) | 296 |
| BspDI | ATCGAT | 1 cut(s) | 101 |
| BspHI | TCATGA | 2 cut(s) | 241, 420 |
| BspLI | GGNNCC | 1 cut(s) | 93 |
| BspTNI | GGTCTC | 1 cut(s) | 504 |
| BssMI | GATC | 2 cut(s) | 102, 195 |
| Bst4CI | ACNGT | 1 cut(s) | 439 |
| BstDEI | CTNAG | 1 cut(s) | 287 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 346 |
| BstKTI | GATC | 2 cut(s) | 105, 198 |
| BstMAI | GTCTC | 1 cut(s) | 504 |
| BstMBI | GATC | 2 cut(s) | 102, 195 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 215, 224 |
| BstV2I | GAAGAC | 1 cut(s) | 262 |
| Bsu15I | ATCGAT | 1 cut(s) | 101 |
| BsuRI | GGCC | 1 cut(s) | 296 |
| BsuTUI | ATCGAT | 1 cut(s) | 101 |
| CciI | TCATGA | 2 cut(s) | 241, 420 |
| ClaI | ATCGAT | 1 cut(s) | 101 |
| Csp6I | GTAC | 2 cut(s) | 112, 455 |
| CviAII | CATG | 3 cut(s) | 242, 331, 421 |
| CviJI | RGCY | 8 cut(s) | 50, 167, 181, 209, 260, 286, 296, 341 |
| CviKI_1 | RGCY | 8 cut(s) | 50, 167, 181, 209, 260, 286, 296, 341 |
| CviQI | GTAC | 2 cut(s) | 112, 455 |
| DdeI | CTNAG | 1 cut(s) | 287 |
| DpnI | GATC | 2 cut(s) | 104, 197 |
| DpnII | GATC | 2 cut(s) | 102, 195 |
| Eco24I | GRGCYC | 1 cut(s) | 52 |
| Eco31I | GGTCTC | 1 cut(s) | 504 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 346 |
| EcoT38I | GRGCYC | 1 cut(s) | 52 |
| FaeI | CATG | 3 cut(s) | 245, 334, 424 |
| FatI | CATG | 3 cut(s) | 241, 330, 420 |
| FbaI | TGATCA | 1 cut(s) | 195 |
| FriOI | GRGCYC | 1 cut(s) | 52 |
| GsaI | CCCAGC | 1 cut(s) | 409 |
| HaeIII | GGCC | 1 cut(s) | 296 |
| Hin1II | CATG | 3 cut(s) | 245, 334, 424 |
| HindIII | AAGCTT | 1 cut(s) | 284 |
| HinfI | GANTC | 1 cut(s) | 498 |
| HphI | GGTGA | 1 cut(s) | 16 |
| Hpy188I | TCNGA | 1 cut(s) | 109 |
| Hpy188III | TCNNGA | 5 cut(s) | 89, 242, 367, 421, 492 |
| HpyAV | CCTTC | 3 cut(s) | 229, 454, 526 |
| HpyCH4III | ACNGT | 1 cut(s) | 439 |
| HpyCH4V | TGCA | 2 cut(s) | 10, 132 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 215, 224 |
| HpyF3I | CTNAG | 1 cut(s) | 287 |
| Hsp92II | CATG | 3 cut(s) | 245, 334, 424 |
| Ksp22I | TGATCA | 1 cut(s) | 195 |
| Kzo9I | GATC | 2 cut(s) | 102, 195 |
| LpnPI | CCDG | 3 cut(s) | 74, 334, 391 |
| MaeIII | GTNAC | 1 cut(s) | 439 |
| MalI | GATC | 2 cut(s) | 104, 197 |
| MboI | GATC | 2 cut(s) | 102, 195 |
| MboII | GAAGA | 1 cut(s) | 262 |
| MhlI | GDGCHC | 1 cut(s) | 52 |
| MluCI | AATT | 8 cut(s) | 15, 32, 64, 84, 147, 174, 237, 361 |
| MnlI | CCTC | 5 cut(s) | 105, 290, 363, 367, 488 |
| MseI | TTAA | 3 cut(s) | 177, 254, 459 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 215, 224 |
| NdeII | GATC | 2 cut(s) | 102, 195 |
| NlaIII | CATG | 3 cut(s) | 245, 334, 424 |
| NlaIV | GGNNCC | 1 cut(s) | 93 |
| PagI | TCATGA | 2 cut(s) | 241, 420 |
| PfeI | GAWTC | 1 cut(s) | 498 |
| PsiI | TTATAA | 1 cut(s) | 538 |
| PspFI | CCCAGC | 1 cut(s) | 405 |
| PspN4I | GGNNCC | 1 cut(s) | 93 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 326, 358 |
| RsaI | GTAC | 2 cut(s) | 113, 456 |
| RsaNI | GTAC | 2 cut(s) | 112, 455 |
| SaqAI | TTAA | 3 cut(s) | 177, 254, 459 |
| Sau3AI | GATC | 2 cut(s) | 102, 195 |
| SduI | GDGCHC | 1 cut(s) | 52 |
| SetI | ASST | 4 cut(s) | 97, 288, 378, 446 |
| SmlI | CTYRAG | 3 cut(s) | 204, 281, 367 |
| SmoI | CTYRAG | 3 cut(s) | 204, 281, 367 |
| Sse9I | AATT | 8 cut(s) | 15, 32, 64, 84, 147, 174, 237, 361 |
| SsiI | CCGC | 1 cut(s) | 529 |
| TaaI | ACNGT | 1 cut(s) | 439 |
| TaqI | TCGA | 1 cut(s) | 101 |
| TasI | AATT | 8 cut(s) | 15, 32, 64, 84, 147, 174, 237, 361 |
| TfiI | GAWTC | 1 cut(s) | 498 |
| Tru1I | TTAA | 3 cut(s) | 177, 254, 459 |
| Tru9I | TTAA | 3 cut(s) | 177, 254, 459 |
| TspDTI | ATGAA | 4 cut(s) | 230, 279, 347, 401 |
| TspGWI | ACGGA | 4 cut(s) | 36, 53, 386, 491 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 346 |
| XapI | RAATTY | 5 cut(s) | 64, 84, 147, 237, 361 |