ribonuclease H protein At1g65750
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 785 |
| AciI | CCGC | 4 cut(s) | 190, 460, 719, 785 |
| AclWI | GGATC | 2 cut(s) | 55, 669 |
| AcsI | RAATTY | 7 cut(s) | 181, 322, 385, 688, 706, 975, 1260 |
| AcuI | CTGAAG | 1 cut(s) | 1320 |
| AdeI | CACNNNGTG | 2 cut(s) | 268, 403 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 461 |
| AflIII | ACRYGT | 1 cut(s) | 166 |
| AgsI | TTSAA | 8 cut(s) | 84, 135, 179, 468, 595, 712, 980, 1085 |
| AjnI | CCWGG | 2 cut(s) | 264, 479 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1226, 1258 |
| AluBI | AGCT | 8 cut(s) | 151, 684, 737, 958, 1034, 1150, 1193, 1199 |
| AluI | AGCT | 8 cut(s) | 151, 684, 737, 958, 1034, 1150, 1193, 1199 |
| Alw21I | GWGCWC | 1 cut(s) | 35 |
| Alw26I | GTCTC | 2 cut(s) | 506, 777 |
| AlwI | GGATC | 2 cut(s) | 55, 669 |
| AoxI | GGCC | 2 cut(s) | 24, 97 |
| ApeKI | GCWGC | 3 cut(s) | 424, 734, 1322 |
| ApoI | RAATTY | 7 cut(s) | 181, 322, 385, 688, 706, 975, 1260 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 973, 1005 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 99, 762 |
| AspS9I | GGNCC | 1 cut(s) | 587 |
| AsuHPI | GGTGA | 4 cut(s) | 206, 280, 415, 565 |
| AsuII | TTCGAA | 1 cut(s) | 1343 |
| AvaII | GGWCC | 1 cut(s) | 587 |
| Bbv12I | GWGCWC | 1 cut(s) | 35 |
| BbvI | GCAGC | 3 cut(s) | 411, 746, 1334 |
| BccI | CCATC | 1 cut(s) | 563 |
| BciT130I | CCWGG | 2 cut(s) | 266, 481 |
| BclI | TGATCA | 1 cut(s) | 970 |
| BcoDI | GTCTC | 2 cut(s) | 506, 777 |
| BfaI | CTAG | 5 cut(s) | 206, 609, 738, 941, 1175 |
| BfmI | CTRYAG | 1 cut(s) | 425 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1331 |
| BglII | AGATCT | 1 cut(s) | 1294 |
| BisI | GCNGC | 3 cut(s) | 425, 735, 1323 |
| BlsI | GCNGC | 3 cut(s) | 426, 736, 1324 |
| Bme1390I | CCNGG | 2 cut(s) | 266, 481 |
| Bme18I | GGWCC | 1 cut(s) | 587 |
| BmgT120I | GGNCC | 1 cut(s) | 587 |
| BmiI | GGNNCC | 3 cut(s) | 203, 381, 588 |
| BmrFI | CCNGG | 2 cut(s) | 266, 481 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1035 |
| Bpu14I | TTCGAA | 1 cut(s) | 1343 |
| BpuEI | CTTGAG | 1 cut(s) | 871 |
| Bsa29I | ATCGAT | 1 cut(s) | 50 |
| BsaI | GGTCTC | 1 cut(s) | 506 |
| BsaJI | CCNNGG | 1 cut(s) | 479 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 461 |
| Bse1I | ACTGG | 2 cut(s) | 810, 1282 |
| Bse3DI | GCAATG | 1 cut(s) | 455 |
| BseBI | CCWGG | 2 cut(s) | 266, 481 |
| BseCI | ATCGAT | 1 cut(s) | 50 |
| BseDI | CCNNGG | 1 cut(s) | 479 |
| BseGI | GGATG | 2 cut(s) | 574, 793 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 461 |
| BseMI | GCAATG | 1 cut(s) | 455 |
| BseMII | CTCAG | 1 cut(s) | 905 |
| BseNI | ACTGG | 2 cut(s) | 810, 1282 |
| BseRI | GAGGAG | 2 cut(s) | 127, 1055 |
| BseXI | GCAGC | 3 cut(s) | 411, 746, 1334 |
| BsgI | GTGCAG | 1 cut(s) | 1039 |
| BshFI | GGCC | 2 cut(s) | 26, 99 |
| BshVI | ATCGAT | 1 cut(s) | 50 |
| BsiHKAI | GWGCWC | 1 cut(s) | 35 |
| BslFI | GGGAC | 1 cut(s) | 600 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 461 |
| BsmAI | GTCTC | 2 cut(s) | 506, 777 |
| BsmFI | GGGAC | 1 cut(s) | 600 |
| BsnI | GGCC | 2 cut(s) | 26, 99 |
| Bso31I | GGTCTC | 1 cut(s) | 506 |
| Bsp119I | TTCGAA | 1 cut(s) | 1343 |
| Bsp1286I | GDGCHC | 1 cut(s) | 35 |
| Bsp143I | GATC | 5 cut(s) | 47, 51, 661, 970, 1294 |
| BspACI | CCGC | 4 cut(s) | 190, 460, 719, 785 |
| BspANI | GGCC | 2 cut(s) | 26, 99 |
| BspCNI | CTCAG | 1 cut(s) | 904 |
| BspDI | ATCGAT | 1 cut(s) | 50 |
| BspLI | GGNNCC | 3 cut(s) | 203, 381, 588 |
| BspMAI | CTGCAG | 1 cut(s) | 429 |
| BspPI | GGATC | 2 cut(s) | 55, 669 |
| BspT104I | TTCGAA | 1 cut(s) | 1343 |
| BspTNI | GGTCTC | 1 cut(s) | 506 |
| BsrBI | CCGCTC | 1 cut(s) | 785 |
| BsrDI | GCAATG | 1 cut(s) | 455 |
| BsrI | ACTGG | 2 cut(s) | 810, 1282 |
| BssECI | CCNNGG | 1 cut(s) | 479 |
| BssMI | GATC | 5 cut(s) | 47, 51, 661, 970, 1294 |
| Bst2UI | CCWGG | 2 cut(s) | 266, 481 |
| Bst4CI | ACNGT | 2 cut(s) | 1089, 1380 |
| Bst6I | CTCTTC | 3 cut(s) | 723, 892, 1300 |
| BstBI | TTCGAA | 1 cut(s) | 1343 |
| BstC8I | GCNNGC | 1 cut(s) | 153 |
| BstDEI | CTNAG | 4 cut(s) | 354, 891, 1035, 1154 |
| BstF5I | GGATG | 2 cut(s) | 574, 793 |
| BstKTI | GATC | 5 cut(s) | 50, 54, 664, 973, 1297 |
| BstMAI | GTCTC | 2 cut(s) | 506, 777 |
| BstMBI | GATC | 5 cut(s) | 47, 51, 661, 970, 1294 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 350, 1331 |
| BstNI | CCWGG | 2 cut(s) | 266, 481 |
| BstNSI | RCATGY | 1 cut(s) | 170 |
| BstSCI | CCNGG | 2 cut(s) | 264, 479 |
| BstSFI | CTRYAG | 1 cut(s) | 425 |
| BstV1I | GCAGC | 3 cut(s) | 411, 746, 1334 |
| BstX2I | RGATCY | 2 cut(s) | 661, 1294 |
| BstYI | RGATCY | 2 cut(s) | 661, 1294 |
| Bsu15I | ATCGAT | 1 cut(s) | 50 |
| BsuRI | GGCC | 2 cut(s) | 26, 99 |
| BsuTUI | ATCGAT | 1 cut(s) | 50 |
| BtgZI | GCGATG | 1 cut(s) | 631 |
| BtsCI | GGATG | 2 cut(s) | 574, 793 |
| BtsIMutI | CAGTG | 1 cut(s) | 61 |
| Cac8I | GCNNGC | 1 cut(s) | 153 |
| Cfr13I | GGNCC | 1 cut(s) | 587 |
| ClaI | ATCGAT | 1 cut(s) | 50 |
| CsiI | ACCWGGT | 1 cut(s) | 264 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1073, 1108 |
| CviAII | CATG | 1 cut(s) | 167 |
| DdeI | CTNAG | 4 cut(s) | 354, 891, 1035, 1154 |
| DpnI | GATC | 5 cut(s) | 49, 53, 663, 972, 1296 |
| DpnII | GATC | 5 cut(s) | 47, 51, 661, 970, 1294 |
| DraIII | CACNNNGTG | 2 cut(s) | 268, 403 |
| Eam1104I | CTCTTC | 3 cut(s) | 723, 892, 1300 |
| EarI | CTCTTC | 3 cut(s) | 723, 892, 1300 |
| EciI | GGCGGA | 1 cut(s) | 734 |
| Eco147I | AGGCCT | 1 cut(s) | 99 |
| Eco31I | GGTCTC | 1 cut(s) | 506 |
| Eco47I | GGWCC | 1 cut(s) | 587 |
| Eco57I | CTGAAG | 1 cut(s) | 1320 |
| EcoRII | CCWGG | 2 cut(s) | 264, 479 |
| FaeI | CATG | 1 cut(s) | 170 |
| FaiI | YATR | 7 cut(s) | 39, 168, 420, 1275, 1300, 1376, 1388 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 84, 116, 87, 119, 213, 245 |
| FaqI | GGGAC | 1 cut(s) | 600 |
| FatI | CATG | 1 cut(s) | 166 |
| FauI | CCCGC | 2 cut(s) | 183, 453 |
| FbaI | TGATCA | 1 cut(s) | 970 |
| Fnu4HI | GCNGC | 3 cut(s) | 425, 735, 1323 |
| FokI | GGATG | 2 cut(s) | 581, 800 |
| Fsp4HI | GCNGC | 3 cut(s) | 425, 735, 1323 |
| FspBI | CTAG | 5 cut(s) | 206, 609, 738, 941, 1175 |
| GluI | GCNGC | 3 cut(s) | 425, 735, 1323 |
| HaeIII | GGCC | 2 cut(s) | 26, 99 |
| Hin1II | CATG | 1 cut(s) | 170 |
| HincII | GTYRAC | 1 cut(s) | 1051 |
| HindII | GTYRAC | 1 cut(s) | 1051 |
| HindIII | AAGCTT | 2 cut(s) | 149, 1197 |
| HinfI | GANTC | 4 cut(s) | 8, 131, 331, 369 |
| HpaI | GTTAAC | 1 cut(s) | 1051 |
| HphI | GGTGA | 4 cut(s) | 206, 280, 415, 565 |
| Hpy166II | GTNNAC | 2 cut(s) | 825, 1051 |
| Hpy188I | TCNGA | 3 cut(s) | 336, 894, 918 |
| Hpy188III | TCNNGA | 7 cut(s) | 109, 627, 700, 780, 816, 850, 1106 |
| Hpy8I | GTNNAC | 2 cut(s) | 825, 1051 |
| HpyAV | CCTTC | 8 cut(s) | 89, 110, 242, 296, 575, 789, 913, 1073 |
| HpyCH4III | ACNGT | 2 cut(s) | 1089, 1380 |
| HpyCH4V | TGCA | 6 cut(s) | 427, 446, 525, 831, 871, 1020 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 350, 1331 |
| HpyF3I | CTNAG | 4 cut(s) | 354, 891, 1035, 1154 |
| Hsp92II | CATG | 1 cut(s) | 170 |
| Ksp22I | TGATCA | 1 cut(s) | 970 |
| KspAI | GTTAAC | 1 cut(s) | 1051 |
| Kzo9I | GATC | 5 cut(s) | 47, 51, 661, 970, 1294 |
| LmnI | GCTCC | 1 cut(s) | 1246 |
| Lsp1109I | GCAGC | 3 cut(s) | 411, 746, 1334 |
| MabI | ACCWGGT | 1 cut(s) | 264 |
| MaeI | CTAG | 5 cut(s) | 206, 609, 738, 941, 1175 |
| MaeIII | GTNAC | 1 cut(s) | 1250 |
| MalI | GATC | 5 cut(s) | 49, 53, 663, 972, 1296 |
| MbiI | CCGCTC | 1 cut(s) | 785 |
| MboI | GATC | 5 cut(s) | 47, 51, 661, 970, 1294 |
| MboII | GAAGA | 4 cut(s) | 104, 740, 879, 1317 |
| MflI | RGATCY | 2 cut(s) | 661, 1294 |
| MhlI | GDGCHC | 1 cut(s) | 35 |
| MmeI | TCCRAC | 3 cut(s) | 69, 558, 1224 |
| MroXI | GAANNNNTTC | 2 cut(s) | 99, 762 |
| MseI | TTAA | 4 cut(s) | 123, 288, 1050, 1353 |
| MspR9I | CCNGG | 2 cut(s) | 266, 481 |
| MvaI | CCWGG | 2 cut(s) | 266, 481 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 350, 1331 |
| NdeII | GATC | 5 cut(s) | 47, 51, 661, 970, 1294 |
| NlaIII | CATG | 1 cut(s) | 170 |
| NlaIV | GGNNCC | 3 cut(s) | 203, 381, 588 |
| NspI | RCATGY | 1 cut(s) | 170 |
| NspV | TTCGAA | 1 cut(s) | 1343 |
| PceI | AGGCCT | 1 cut(s) | 99 |
| PciI | ACATGT | 1 cut(s) | 166 |
| PdmI | GAANNNNTTC | 2 cut(s) | 99, 762 |
| PfeI | GAWTC | 4 cut(s) | 8, 131, 331, 369 |
| PkrI | GCNGC | 3 cut(s) | 426, 736, 1324 |
| PscI | ACATGT | 1 cut(s) | 166 |
| Psp6I | CCWGG | 2 cut(s) | 264, 479 |
| PspGI | CCWGG | 2 cut(s) | 264, 479 |
| PspN4I | GGNNCC | 3 cut(s) | 203, 381, 588 |
| PspPI | GGNCC | 1 cut(s) | 587 |
| PstI | CTGCAG | 1 cut(s) | 429 |
| PsuI | RGATCY | 2 cut(s) | 661, 1294 |
| SaqAI | TTAA | 4 cut(s) | 123, 288, 1050, 1353 |
| SatI | GCNGC | 3 cut(s) | 425, 735, 1323 |
| Sau3AI | GATC | 5 cut(s) | 47, 51, 661, 970, 1294 |
| Sau96I | GGNCC | 1 cut(s) | 587 |
| ScrFI | CCNGG | 2 cut(s) | 266, 481 |
| SduI | GDGCHC | 1 cut(s) | 35 |
| SexAI | ACCWGGT | 1 cut(s) | 264 |
| SfcI | CTRYAG | 1 cut(s) | 425 |
| SfuI | TTCGAA | 1 cut(s) | 1343 |
| SinI | GGWCC | 1 cut(s) | 587 |
| SmlI | CTYRAG | 1 cut(s) | 850 |
| SmoI | CTYRAG | 1 cut(s) | 850 |
| SseBI | AGGCCT | 1 cut(s) | 99 |
| SsiI | CCGC | 4 cut(s) | 190, 460, 719, 785 |
| SspMI | CTAG | 5 cut(s) | 206, 609, 738, 941, 1175 |
| StuI | AGGCCT | 1 cut(s) | 99 |
| StyD4I | CCNGG | 2 cut(s) | 264, 479 |
| TaaI | ACNGT | 2 cut(s) | 1089, 1380 |
| TaqI | TCGA | 5 cut(s) | 50, 472, 626, 1146, 1343 |
| TfiI | GAWTC | 4 cut(s) | 8, 131, 331, 369 |
| Tru1I | TTAA | 4 cut(s) | 123, 288, 1050, 1353 |
| Tru9I | TTAA | 4 cut(s) | 123, 288, 1050, 1353 |
| TscAI | CASTG | 1 cut(s) | 61 |
| TseI | GCWGC | 3 cut(s) | 424, 734, 1322 |
| TspDTI | ATGAA | 3 cut(s) | 233, 354, 1055 |
| TspRI | CASTG | 1 cut(s) | 61 |
| VpaK11BI | GGWCC | 1 cut(s) | 587 |
| XapI | RAATTY | 7 cut(s) | 181, 322, 385, 688, 706, 975, 1260 |
| XceI | RCATGY | 1 cut(s) | 170 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 390 |
| XmnI | GAANNNNTTC | 2 cut(s) | 99, 762 |
| XspI | CTAG | 5 cut(s) | 206, 609, 738, 941, 1175 |