ribonuclease H protein At1g65750
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 816, 1017 |
| AarI | CACCTGC | 2 cut(s) | 784, 3095 |
| Acc36I | ACCTGC | 2 cut(s) | 784, 3095 |
| AccBSI | CCGCTC | 1 cut(s) | 3044 |
| AciI | CCGC | 7 cut(s) | 393, 1469, 2084, 2448, 2719, 2993, 3044 |
| AclWI | GGATC | 3 cut(s) | 2303, 2316, 2928 |
| AcoI | YGGCCR | 1 cut(s) | 2249 |
| AcuI | CTGAAG | 2 cut(s) | 544, 3579 |
| AcyI | GRCGYC | 1 cut(s) | 2461 |
| AdeI | CACNNNGTG | 2 cut(s) | 2527, 2662 |
| AfaI | GTAC | 3 cut(s) | 827, 1323, 2137 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 191, 1634, 2278, 2279, 2679, 2720 |
| AflII | CTTAAG | 1 cut(s) | 515 |
| AflIII | ACRYGT | 2 cut(s) | 735, 2424 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1930 |
| AjnI | CCWGG | 3 cut(s) | 1360, 2523, 2738 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 240, 272, 3485, 3517 |
| Alw21I | GWGCWC | 2 cut(s) | 2124, 2296 |
| Alw26I | GTCTC | 7 cut(s) | 277, 1030, 1445, 1909, 2273, 2765, 3036 |
| AlwI | GGATC | 3 cut(s) | 2303, 2316, 2928 |
| ApeKI | GCWGC | 5 cut(s) | 965, 1286, 1614, 2683, 3581 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 3232, 3264 |
| AseI | ATTAAT | 1 cut(s) | 1976 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 767, 2357, 2862, 3021 |
| AspA2I | CCTAGG | 2 cut(s) | 1883, 3433 |
| AspS9I | GGNCC | 7 cut(s) | 329, 395, 710, 1263, 1364, 2846, 3430 |
| AsuNHI | GCTAGC | 1 cut(s) | 914 |
| AvaII | GGWCC | 4 cut(s) | 329, 395, 1364, 2846 |
| AvrII | CCTAGG | 2 cut(s) | 1883, 3433 |
| BalI | TGGCCA | 1 cut(s) | 2251 |
| BamHI | GGATCC | 1 cut(s) | 2308 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 454, 486 |
| Bbv12I | GWGCWC | 2 cut(s) | 2124, 2296 |
| BbvCI | CCTCAGC | 1 cut(s) | 909 |
| BbvI | GCAGC | 5 cut(s) | 952, 1298, 1626, 2670, 3593 |
| BccI | CCATC | 7 cut(s) | 396, 855, 1067, 1364, 1812, 2691, 2822 |
| BceAI | ACGGC | 1 cut(s) | 1655 |
| BciT130I | CCWGG | 3 cut(s) | 1362, 2525, 2740 |
| BclI | TGATCA | 2 cut(s) | 2004, 3229 |
| BcoDI | GTCTC | 7 cut(s) | 277, 1030, 1445, 1909, 2273, 2765, 3036 |
| BfmI | CTRYAG | 3 cut(s) | 743, 1534, 2684 |
| BfrI | CTTAAG | 1 cut(s) | 515 |
| BfuAI | ACCTGC | 2 cut(s) | 784, 3095 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 3590 |
| BglII | AGATCT | 4 cut(s) | 197, 1006, 2040, 3553 |
| BisI | GCNGC | 6 cut(s) | 966, 1287, 1615, 2684, 2994, 3582 |
| BlnI | CCTAGG | 2 cut(s) | 1883, 3433 |
| BlsI | GCNGC | 6 cut(s) | 967, 1288, 1616, 2685, 2995, 3583 |
| Bme1390I | CCNGG | 3 cut(s) | 1362, 2525, 2740 |
| Bme18I | GGWCC | 4 cut(s) | 329, 395, 1364, 2846 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1930 |
| BmgT120I | GGNCC | 7 cut(s) | 329, 395, 710, 1263, 1364, 2846, 3430 |
| BmiI | GGNNCC | 5 cut(s) | 331, 711, 2310, 2640, 2847 |
| BmrFI | CCNGG | 3 cut(s) | 1362, 2525, 2740 |
| BmsI | GCATC | 5 cut(s) | 895, 1159, 1263, 1657, 3270 |
| BmtI | GCTAGC | 1 cut(s) | 918 |
| BoxI | GACNNNNGTC | 1 cut(s) | 672 |
| BpmI | CTGGAG | 1 cut(s) | 2697 |
| Bpu10I | CCTNAGC | 1 cut(s) | 909 |
| BpuEI | CTTGAG | 5 cut(s) | 174, 1316, 1974, 1987, 3130 |
| Bsa29I | ATCGAT | 1 cut(s) | 1740 |
| BsaHI | GRCGYC | 1 cut(s) | 2461 |
| BsaI | GGTCTC | 3 cut(s) | 1445, 2273, 2765 |
| BsaJI | CCNNGG | 3 cut(s) | 1883, 2738, 3433 |
| BsaWI | WCCGGW | 1 cut(s) | 1454 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1609, 1629, 1639, 1659 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 191, 1634, 2278, 2279, 2679, 2720 |
| Bse1I | ACTGG | 6 cut(s) | 311, 1561, 2312, 2714, 3069, 3541 |
| Bse3DI | GCAATG | 1 cut(s) | 2806 |
| BseBI | CCWGG | 3 cut(s) | 1362, 2525, 2740 |
| BseCI | ATCGAT | 1 cut(s) | 1740 |
| BseDI | CCNNGG | 3 cut(s) | 1883, 2738, 3433 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 191, 1634, 2278, 2279, 2679, 2720 |
| BseMI | GCAATG | 1 cut(s) | 2806 |
| BseMII | CTCAG | 4 cut(s) | 780, 900, 1272, 2205 |
| BseNI | ACTGG | 6 cut(s) | 311, 1561, 2312, 2714, 3069, 3541 |
| BseRI | GAGGAG | 4 cut(s) | 429, 1454, 1733, 2385 |
| BseXI | GCAGC | 5 cut(s) | 952, 1298, 1626, 2670, 3593 |
| BsgI | GTGCAG | 2 cut(s) | 1853, 3298 |
| BshVI | ATCGAT | 1 cut(s) | 1740 |
| BsiHKAI | GWGCWC | 2 cut(s) | 2124, 2296 |
| BsiSI | CCGG | 1 cut(s) | 1455 |
| BslFI | GGGAC | 3 cut(s) | 315, 1195, 2859 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 191, 1634, 2278, 2279, 2679, 2720 |
| BsmAI | GTCTC | 7 cut(s) | 277, 1030, 1445, 1909, 2273, 2765, 3036 |
| BsmFI | GGGAC | 3 cut(s) | 315, 1195, 2859 |
| BsmI | GAATGC | 1 cut(s) | 2707 |
| Bso31I | GGTCTC | 3 cut(s) | 1445, 2273, 2765 |
| Bsp1286I | GDGCHC | 2 cut(s) | 2124, 2296 |
| Bsp1407I | TGTACA | 1 cut(s) | 825 |
| BspACI | CCGC | 7 cut(s) | 393, 1469, 2084, 2448, 2719, 2993, 3044 |
| BspCNI | CTCAG | 4 cut(s) | 781, 901, 1273, 2204 |
| BspDI | ATCGAT | 1 cut(s) | 1740 |
| BspLI | GGNNCC | 5 cut(s) | 331, 711, 2310, 2640, 2847 |
| BspMAI | CTGCAG | 1 cut(s) | 2688 |
| BspMI | ACCTGC | 2 cut(s) | 784, 3095 |
| BspOI | GCTAGC | 1 cut(s) | 918 |
| BspPI | GGATC | 3 cut(s) | 2303, 2316, 2928 |
| BspTI | CTTAAG | 1 cut(s) | 515 |
| BspTNI | GGTCTC | 3 cut(s) | 1445, 2273, 2765 |
| BsrBI | CCGCTC | 1 cut(s) | 3044 |
| BsrDI | GCAATG | 1 cut(s) | 2806 |
| BsrGI | TGTACA | 1 cut(s) | 825 |
| BsrI | ACTGG | 6 cut(s) | 311, 1561, 2312, 2714, 3069, 3541 |
| BssECI | CCNNGG | 3 cut(s) | 1883, 2738, 3433 |
| BssNI | GRCGYC | 1 cut(s) | 2461 |
| BssT1I | CCWWGG | 2 cut(s) | 1883, 3433 |
| Bst2UI | CCWGG | 3 cut(s) | 1362, 2525, 2740 |
| Bst4CI | ACNGT | 5 cut(s) | 386, 1400, 1932, 2140, 3639 |
| BstACI | GRCGYC | 1 cut(s) | 2461 |
| BstAFI | CTTAAG | 1 cut(s) | 515 |
| BstAUI | TGTACA | 1 cut(s) | 825 |
| BstC8I | GCNNGC | 4 cut(s) | 376, 916, 2285, 2411 |
| BstDEI | CTNAG | 7 cut(s) | 789, 909, 1281, 1951, 2191, 2613, 3413 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 189 |
| BstMAI | GTCTC | 7 cut(s) | 277, 1030, 1445, 1909, 2273, 2765, 3036 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 73, 82, 790, 1251, 1300, 2609, 3590 |
| BstNI | CCWGG | 3 cut(s) | 1362, 2525, 2740 |
| BstNSI | RCATGY | 2 cut(s) | 739, 2428 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 672 |
| BstSCI | CCNGG | 3 cut(s) | 1360, 2523, 2738 |
| BstSFI | CTRYAG | 3 cut(s) | 743, 1534, 2684 |
| BstV1I | GCAGC | 5 cut(s) | 952, 1298, 1626, 2670, 3593 |
| BstX2I | RGATCY | 6 cut(s) | 197, 1006, 2040, 2308, 2920, 3553 |
| BstYI | RGATCY | 6 cut(s) | 197, 1006, 2040, 2308, 2920, 3553 |
| Bsu15I | ATCGAT | 1 cut(s) | 1740 |
| BsuTUI | ATCGAT | 1 cut(s) | 1740 |
| BtgZI | GCGATG | 1 cut(s) | 2890 |
| BtsIMutI | CAGTG | 4 cut(s) | 1396, 1928, 2319, 2721 |
| BveI | ACCTGC | 2 cut(s) | 784, 3095 |
| Cac8I | GCNNGC | 4 cut(s) | 376, 916, 2285, 2411 |
| Cfr13I | GGNCC | 7 cut(s) | 329, 395, 710, 1263, 1364, 2846, 3430 |
| ClaI | ATCGAT | 1 cut(s) | 1740 |
| CseI | GACGC | 1 cut(s) | 2469 |
| CsiI | ACCWGGT | 1 cut(s) | 2523 |
| Csp6I | GTAC | 3 cut(s) | 826, 1322, 2136 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 1671, 1706, 2898, 2933, 3332, 3367 |
| CviAII | CATG | 5 cut(s) | 478, 736, 1435, 1898, 2425 |
| CviQI | GTAC | 3 cut(s) | 826, 1322, 2136 |
| DdeI | CTNAG | 7 cut(s) | 789, 909, 1281, 1951, 2191, 2613, 3413 |
| DraI | TTTAAA | 3 cut(s) | 60, 166, 1735 |
| DraIII | CACNNNGTG | 2 cut(s) | 2527, 2662 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1930 |
| EaeI | YGGCCR | 1 cut(s) | 2249 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1930 |
| EciI | GGCGGA | 1 cut(s) | 2099 |
| Eco130I | CCWWGG | 2 cut(s) | 1883, 3433 |
| Eco147I | AGGCCT | 3 cut(s) | 1303, 1540, 1882 |
| Eco31I | GGTCTC | 3 cut(s) | 1445, 2273, 2765 |
| Eco47I | GGWCC | 4 cut(s) | 329, 395, 1364, 2846 |
| Eco57I | CTGAAG | 2 cut(s) | 544, 3579 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 189 |
| EcoO109I | RGGNCCY | 1 cut(s) | 3430 |
| EcoRI | GAATTC | 1 cut(s) | 1406 |
| EcoRII | CCWGG | 3 cut(s) | 1360, 2523, 2738 |
| EcoT14I | CCWWGG | 2 cut(s) | 1883, 3433 |
| ErhI | CCWWGG | 2 cut(s) | 1883, 3433 |
| FaeI | CATG | 5 cut(s) | 481, 739, 1438, 1901, 2428 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 646, 678, 975, 1007, 2345, 2377, 2472, 2504 |
| FaqI | GGGAC | 3 cut(s) | 315, 1195, 2859 |
| FatI | CATG | 5 cut(s) | 477, 735, 1434, 1897, 2424 |
| FauI | CCCGC | 2 cut(s) | 2441, 2712 |
| FbaI | TGATCA | 2 cut(s) | 2004, 3229 |
| Fnu4HI | GCNGC | 6 cut(s) | 966, 1287, 1615, 2684, 2994, 3582 |
| Fsp4HI | GCNGC | 6 cut(s) | 966, 1287, 1615, 2684, 2994, 3582 |
| GluI | GCNGC | 6 cut(s) | 966, 1287, 1615, 2684, 2994, 3582 |
| GsuI | CTGGAG | 1 cut(s) | 2697 |
| HapII | CCGG | 1 cut(s) | 1455 |
| HgaI | GACGC | 1 cut(s) | 2469 |
| Hin1I | GRCGYC | 1 cut(s) | 2461 |
| Hin1II | CATG | 5 cut(s) | 481, 739, 1438, 1901, 2428 |
| HincII | GTYRAC | 2 cut(s) | 1198, 3310 |
| HindII | GTYRAC | 2 cut(s) | 1198, 3310 |
| HindIII | AAGCTT | 2 cut(s) | 2407, 3456 |
| HpaI | GTTAAC | 2 cut(s) | 1198, 3310 |
| HpaII | CCGG | 1 cut(s) | 1455 |
| Hpy166II | GTNNAC | 3 cut(s) | 1198, 3084, 3310 |
| Hpy8I | GTNNAC | 3 cut(s) | 1198, 3084, 3310 |
| HpyCH4III | ACNGT | 5 cut(s) | 386, 1400, 1932, 2140, 3639 |
| HpyCH4IV | ACGT | 2 cut(s) | 426, 2300 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 73, 82, 790, 1251, 1300, 2609, 3590 |
| HpyF3I | CTNAG | 7 cut(s) | 789, 909, 1281, 1951, 2191, 2613, 3413 |
| HpySE526I | ACGT | 2 cut(s) | 426, 2300 |
| Hsp92I | GRCGYC | 1 cut(s) | 2461 |
| Hsp92II | CATG | 5 cut(s) | 481, 739, 1438, 1901, 2428 |
| Ksp22I | TGATCA | 2 cut(s) | 2004, 3229 |
| KspAI | GTTAAC | 2 cut(s) | 1198, 3310 |
| LmnI | GCTCC | 2 cut(s) | 1637, 3505 |
| Lsp1109I | GCAGC | 5 cut(s) | 952, 1298, 1626, 2670, 3593 |
| LweI | GCATC | 5 cut(s) | 895, 1159, 1263, 1657, 3270 |
| MabI | ACCWGGT | 1 cut(s) | 2523 |
| MaeII | ACGT | 2 cut(s) | 426, 2300 |
| MaeIII | GTNAC | 8 cut(s) | 658, 987, 1223, 1471, 1525, 1552, 1932, 3509 |
| MbiI | CCGCTC | 1 cut(s) | 3044 |
| MfeI | CAATTG | 2 cut(s) | 123, 1258 |
| MflI | RGATCY | 6 cut(s) | 197, 1006, 2040, 2308, 2920, 3553 |
| MhlI | GDGCHC | 2 cut(s) | 2124, 2296 |
| MlsI | TGGCCA | 1 cut(s) | 2251 |
| MluNI | TGGCCA | 1 cut(s) | 2251 |
| MmeI | TCCRAC | 8 cut(s) | 238, 282, 560, 706, 927, 1119, 2817, 3483 |
| Mox20I | TGGCCA | 1 cut(s) | 2251 |
| MroXI | GAANNNNTTC | 4 cut(s) | 767, 2357, 2862, 3021 |
| MscI | TGGCCA | 1 cut(s) | 2251 |
| Msp20I | TGGCCA | 1 cut(s) | 2251 |
| MspA1I | CMGCKG | 1 cut(s) | 2002 |
| MspCI | CTTAAG | 1 cut(s) | 515 |
| MspI | CCGG | 1 cut(s) | 1455 |
| MspR9I | CCNGG | 3 cut(s) | 1362, 2525, 2740 |
| MunI | CAATTG | 2 cut(s) | 123, 1258 |
| Mva1269I | GAATGC | 1 cut(s) | 2707 |
| MvaI | CCWGG | 3 cut(s) | 1362, 2525, 2740 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 73, 82, 790, 1251, 1300, 2609, 3590 |
| NheI | GCTAGC | 1 cut(s) | 914 |
| NlaIII | CATG | 5 cut(s) | 481, 739, 1438, 1901, 2428 |
| NlaIV | GGNNCC | 5 cut(s) | 331, 711, 2310, 2640, 2847 |
| NmuCI | GTSAC | 3 cut(s) | 1471, 1525, 1932 |
| NspI | RCATGY | 2 cut(s) | 739, 2428 |
| PaqCI | CACCTGC | 2 cut(s) | 784, 3095 |
| PceI | AGGCCT | 3 cut(s) | 1303, 1540, 1882 |
| PciI | ACATGT | 2 cut(s) | 735, 2424 |
| PctI | GAATGC | 1 cut(s) | 2707 |
| PdmI | GAANNNNTTC | 4 cut(s) | 767, 2357, 2862, 3021 |
| PkrI | GCNGC | 6 cut(s) | 967, 1288, 1616, 2685, 2995, 3583 |
| PscI | ACATGT | 2 cut(s) | 735, 2424 |
| PshAI | GACNNNNGTC | 1 cut(s) | 672 |
| PshBI | ATTAAT | 1 cut(s) | 1976 |
| PsiI | TTATAA | 2 cut(s) | 816, 1017 |
| Psp6I | CCWGG | 3 cut(s) | 1360, 2523, 2738 |
| PspGI | CCWGG | 3 cut(s) | 1360, 2523, 2738 |
| PspN4I | GGNNCC | 5 cut(s) | 331, 711, 2310, 2640, 2847 |
| PspPI | GGNCC | 7 cut(s) | 329, 395, 710, 1263, 1364, 2846, 3430 |
| PstI | CTGCAG | 1 cut(s) | 2688 |
| PsuI | RGATCY | 6 cut(s) | 197, 1006, 2040, 2308, 2920, 3553 |
| PvuII | CAGCTG | 1 cut(s) | 2002 |
| RsaI | GTAC | 3 cut(s) | 827, 1323, 2137 |
| RsaNI | GTAC | 3 cut(s) | 826, 1322, 2136 |
| SatI | GCNGC | 6 cut(s) | 966, 1287, 1615, 2684, 2994, 3582 |
| Sau96I | GGNCC | 7 cut(s) | 329, 395, 710, 1263, 1364, 2846, 3430 |
| ScrFI | CCNGG | 3 cut(s) | 1362, 2525, 2740 |
| SduI | GDGCHC | 2 cut(s) | 2124, 2296 |
| SexAI | ACCWGGT | 1 cut(s) | 2523 |
| SfaNI | GCATC | 5 cut(s) | 895, 1159, 1263, 1657, 3270 |
| SfcI | CTRYAG | 3 cut(s) | 743, 1534, 2684 |
| SinI | GGWCC | 4 cut(s) | 329, 395, 1364, 2846 |
| SmlI | CTYRAG | 6 cut(s) | 189, 515, 1295, 1966, 1989, 3109 |
| SmoI | CTYRAG | 6 cut(s) | 189, 515, 1295, 1966, 1989, 3109 |
| SseBI | AGGCCT | 3 cut(s) | 1303, 1540, 1882 |
| SsiI | CCGC | 7 cut(s) | 393, 1469, 2084, 2448, 2719, 2993, 3044 |
| StuI | AGGCCT | 3 cut(s) | 1303, 1540, 1882 |
| StyD4I | CCNGG | 3 cut(s) | 1360, 2523, 2738 |
| StyI | CCWWGG | 2 cut(s) | 1883, 3433 |
| TaaI | ACNGT | 5 cut(s) | 386, 1400, 1932, 2140, 3639 |
| TaiI | ACGT | 2 cut(s) | 429, 2303 |
| TaqI | TCGA | 5 cut(s) | 1740, 1767, 2731, 2885, 3405 |
| TatI | WGTACW | 3 cut(s) | 825, 1321, 2135 |
| TauI | GCSGC | 1 cut(s) | 2996 |
| TscAI | CASTG | 4 cut(s) | 1403, 1935, 2319, 2721 |
| TseFI | GTSAC | 3 cut(s) | 1471, 1525, 1932 |
| TseI | GCWGC | 5 cut(s) | 965, 1286, 1614, 2683, 3581 |
| Tsp45I | GTSAC | 3 cut(s) | 1471, 1525, 1932 |
| TspDTI | ATGAA | 8 cut(s) | 17, 487, 1494, 1886, 2492, 2613, 3314, 3621 |
| TspGWI | ACGGA | 2 cut(s) | 1544, 1852 |
| TspRI | CASTG | 4 cut(s) | 1403, 1935, 2319, 2721 |
| Vha464I | CTTAAG | 1 cut(s) | 515 |
| VpaK11BI | GGWCC | 4 cut(s) | 329, 395, 1364, 2846 |
| VspI | ATTAAT | 1 cut(s) | 1976 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 189 |
| XceI | RCATGY | 2 cut(s) | 739, 2428 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2649 |
| XmaJI | CCTAGG | 2 cut(s) | 1883, 3433 |
| XmnI | GAANNNNTTC | 4 cut(s) | 767, 2357, 2862, 3021 |