Prupe.5G070700_v2.0.a1

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0000842
Physical Location & Seq
Forward (+)
8509074 .. 8512347
3274 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G070700.1

Sequence Viewer

Length: 2346 bp
ATGAGAAGTTTTGTTTTACCAAATGATCGAAGATGTTTTAACAAGACTGGTGTTTCAGAACTCAGAAGAAACTGTTCAAGCCAACTACACATATTGGTATTTCTCTCTCCTACAGAATCAACAAGAAAAGAAGCTGTACTATGGACAAATTGCAGAGGTGTAAAACTCATCAGTGAGTTTACAGAACCAAGGAAAAACTCATTAGGGAACTTACCATGGCAGGAGTCATGGCCAAATACTTTCATTAGTCACCACCCAGCAATCGGTTCGGATCACAATTCACTGGTCTTGGAGACAACCATGTATCATAAAAATCATAGAAGGCAGTTCAAGTTTGAAGCTTATTGGGCCAATGAGGTAGAGGCTAAACAGATTATTGAAAAAGGTTGGGAAAAGCAAGTTCATGGTTCGTGGATACATAAATGGAAAGCAAAGCTTCAACTTTGCACTACCCTCCTTAAAAAATGGAGCAGAGAAAAGTTCTCAAACAATAAGAAGAGAATGGAGGCCCTTCACGTTAAGCTCAATGAAAAACAATTAAGAATTAAGGGCGATGATGGGCATTGGCATGTGGGTGAGCCAGCCGTCAGGAGGGTGTTTGAAGAGCATTTCAAGAAATTGTTCACTTCTGAGGCTCAATCCATTAATGGTGATATTCTTGATTGTGTTGACAGTGTGATCTCCCAAACTACCAATGACAACTTATTGCAGGCAATTACTATGGAAGAGATAAAGGAGGCTGCAATGCAGATGGGAGGTTTAAAGGCTCCAGGTCCTGATGGATATCAAGGAATTTTCTTTCACAAATATTGGGACACTATTTATGATGAAGTTAGAGGCATCACAGAGGATTTCTTCCTAAAAAATCAGAGTCTTGGTGCTTTGAATATTACAAACCTGGTTTTAATTCCCAAAATTCCAAACCCTGAGGGAGTTTCTCATTTTCGCCTAATTAGCCTATGTAATTTCTCTTTCAAGATTGTATCTAAAGTTATGGCAAATAGATTGAAGGTTTTTTTGCCTCAAATCATCTCTCCGGCTCAAAATGCTTTTGCTTATGATAGGGTGGAGTGGCATTTCTTGGAATCGGTCATGATCAAGATGGGTTTTTATGTTCGTTGGGTCAACTTGGTGATGAATTTGGTTCATACTGTGCCATTCTCGCTGGTCTTGAATGGGGTGCAAGGTAACACTTTTACACCAACGAGGGGCATCCGACAAGGCGATCCACTATCACCGTACTTGTTTTTGATTGTGAGTGAGGTCCTCTCCCTCATGATTAAAAAAGCATGTGAGGCTAATCACTTGCAAGGCCTAAAGTTTGGAAGAAGTGGACCTACTCTCTCTCACCTTCTTTTTGCCGATGATGCCCTCTTTTTTATCAGGGCTAATACTCAGAACTGTCGTAATATGCGATTGTTGCTTGACGGCTACTGTCGTGCGTCTGGTCAGCAAATCAATTTCGGGAAATCAAGCCTTTTCTTTAGTCCCAATACACCTGCAAGTATCCGCACGCAGTTGGGTGCCATTCTTGGTATGACTATGGTAGATGACCCAGGTAAATACTTGGGACTTCCTACAATGTGGGGGAGGTCTAAGAAGGAGGCGCTGCAGTTTGTGAAGGAGAAGTTGTTGCGTAAGTTAAGCAGATGGAAACAATCCCTTCTCTCACAAGCCGGTAGGGAGGTCCTTATCAAAGCCATTGTTCAAGCTGTCCCGAATTACCCTATGAGAGTTTTCTTATTCCCTAAAACGTTCTGTTTAATGCGGCCTCTATTATCGACTGAAGAGGCTTTTGCCATTCAACGGATCCCTATAGGAAGCAGCTCAGAGGTGGATTGCCTGGTGTGGCCGGATGAGAAAAATGGAAAATACTCGGTAAAATCTGGTTATCACAACATTCATACTCATCATCATCGCAGCTCCGTGCGTAGACCTTCTTCCTCTATGTCCAAAGACCAAAGGGCCTGGAAGTTGATTTGGCACGCAGATGTCACACCAAAAATTTGCCATTTCTTTTGGAGAGCTTTAAATGGCCACGTGGCTGTCTCATCTGTTCTTTATAAGAAGAAGCTGCGGAACTCTCCCTTATGTCCAATTTTCAATGATCACGAGGAGACAATTGAGCACATGTTATTGCTTTGCCCTTGGGTTGAACCTGTCTGGTTCGAAGGCCTAACCTATAGAGTTGATAGGCAGCAAATTTCTTCTCTACATACATGGAGGAGAGAAGCCGAATGTCAGATTGCATACACTTGCTGGAATATATGGAAGACTAGAAATATGGTGGTGTTTGACAATTTCACACCTCAACCCCAGCAAACCCTCAAGGCCATTTTCGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

782

Amino Acids

90.21

Weight (kDa)

9.52

Isoelectric Point (pI)

44.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000842)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g15420 FvH4_2g00771 FvH4_3g29363
malus_domestica MD02G1293300.v1.1 MD06G1023000.v1.1 MD09G1232900.v1.1
prunus_persica Prupe.1G181500_v2.0.a1 Prupe.1G572100_v2.0.a1 Prupe.2G095500_v2.0.a1 Prupe.3G150400_v2.0.a1 Prupe.3G156200_v2.0.a1 Prupe.4G274400_v2.0.a1 Prupe.5G070700_v2.0.a1 Prupe.7G038000_v2.0.a1 Prupe.7G164000_v2.0.a1 Prupe.8G056500_v2.0.a1
pyrus_communis pycom04g02040 pycom05g04600 pycom07g05610 pycom08g16130 pycom11g16470 pycom12g07830 pycom15g38190 pycom215g00040
rosa_chinensis RchiOBHm_Chr1g0348881 RchiOBHm_Chr5g0032951 RchiOBHm_Chr6g0273271 RchiOBHm_Chr7g0218191 RchiOBHm_Chr7g0223721
rosa_multiflora Rmu_co8286615.1_g000001 Rmu_sc0001354.1_g000002 Rmu_sc0001925.1_g000003 Rmu_sc0001925.1_g000005 Rmu_sc0002221.1_g000004 Rmu_sc0002316.1_g000096 Rmu_sc0003291.1_g000005 Rmu_sc0003413.1_g000005 Rmu_sc0003542.1_g000011 Rmu_sc0004035.1_g000003 Rmu_sc0004035.1_g000004 Rmu_sc0004145.1_g000016 Rmu_sc0004660.1_g000004 Rmu_sc0005999.1_g000006 Rmu_sc0006123.1_g000002 Rmu_sc0006586.1_g000006 Rmu_sc0006889.1_g000029 Rmu_sc0008035.1_g000014 Rmu_sc0011962.1_g000002 Rmu_sc0029950.1_g000001 Rmu_sc0042409.1_g000001 Rmu_ssc0000238.1_g000013
rosa_roxburghii Rroxscaffold_2G00137410 Rroxscaffold_4G00312010 Rroxscaffold_4G00320800 Rroxscaffold_5G00341720 Rroxscaffold_5G00353530 Rroxscaffold_5G00360290 Rroxscaffold_7G00214170 Rroxscaffold_7G00215920
rosa_rugosa Rorug02G0157000
rosa_samantha Rh4BG196500 Rh6CG346400 Rh7BG241100 Rh7DG316300
rosa_wichuraiana Rw1G003610 Rw7G012170 Rw7G030150

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2064
AarI CACCTGC 1 cut(s) 1507
Acc36I ACCTGC 1 cut(s) 1507
AccB1I GGYRCC 1 cut(s) 1523
AccI GTMKAC 1 cut(s) 1933
AciI CCGC 3 cut(s) 1510, 1768, 2077
AclI AACGTT 1 cut(s) 1754
AclWI GGATC 4 cut(s) 279, 1220, 1804, 1817
AcoI YGGCCR 3 cut(s) 230, 1850, 2035
AcsI RAATTY 5 cut(s) 792, 915, 1138, 2004, 2202
AcuI CTGAAG 1 cut(s) 1806
AcvI CACGTG 1 cut(s) 2041
AfaI GTAC 2 cut(s) 138, 1241
AfiI CCNNNNNNNGG 4 cut(s) 263, 591, 1208, 1806
AflIII ACRYGT 1 cut(s) 2130
AjnI CCWGG 5 cut(s) 769, 897, 1555, 1842, 1967
AluBI AGCT 9 cut(s) 134, 341, 436, 523, 1712, 1827, 1923, 2027, 2074
AluI AGCT 9 cut(s) 134, 341, 436, 523, 1712, 1827, 1923, 2027, 2074
Alw21I GWGCWC 1 cut(s) 2130
Alw26I GTCTC 3 cut(s) 287, 2053, 2111
AlwI GGATC 4 cut(s) 279, 1220, 1804, 1817
AlwNI CAGNNNCTG 1 cut(s) 776
ApeKI GCWGC 6 cut(s) 740, 1609, 1824, 1920, 2074, 2197
ApoI RAATTY 5 cut(s) 792, 915, 1138, 2004, 2202
AseI ATTAAT 1 cut(s) 645
Asp700I GAANNNNTTC 2 cut(s) 73, 620
AspLEI GCGC 1 cut(s) 1609
AspS9I GGNCC 7 cut(s) 348, 508, 773, 1264, 1334, 1687, 1965
AsuHPI GGTGA 6 cut(s) 242, 587, 662, 1144, 1227, 1340
AsuII TTCGAA 1 cut(s) 2169
AvaII GGWCC 4 cut(s) 773, 1264, 1334, 1687
AxyI CCTNAGG 1 cut(s) 927
BalI TGGCCA 2 cut(s) 232, 2037
BamHI GGATCC 1 cut(s) 1809
BanI GGYRCC 1 cut(s) 1523
BarI GAAGNNNNNNTAC 4 cut(s) 1321, 1353, 1924, 1956
BauI CACGAG 1 cut(s) 2111
BbrPI CACGTG 1 cut(s) 2041
BbsI GAAGAC 1 cut(s) 2279
Bbv12I GWGCWC 1 cut(s) 2130
BbvI GCAGC 6 cut(s) 727, 1596, 1836, 1932, 2061, 2209
BccI CCATC 5 cut(s) 551, 745, 773, 1096, 1644
BceAI ACGGC 2 cut(s) 569, 1444
BcgI CGANNNNNNTGC 2 cut(s) 249, 283
BciT130I CCWGG 5 cut(s) 771, 899, 1557, 1844, 1969
BciVI GTATCC 2 cut(s) 408, 1517
BclI TGATCA 2 cut(s) 1095, 2107
BcoDI GTCTC 3 cut(s) 287, 2053, 2111
BfaI CTAG 2 cut(s) 2277, 2344
BfmI CTRYAG 4 cut(s) 111, 1610, 1815, 2182
BfoI RGCGCY 1 cut(s) 1610
BfuAI ACCTGC 1 cut(s) 1507
BfuI GTATCC 2 cut(s) 408, 1517
BisI GCNGC 7 cut(s) 741, 1610, 1769, 1825, 1921, 2075, 2198
BlsI GCNGC 7 cut(s) 742, 1611, 1770, 1826, 1922, 2076, 2199
Bme1390I CCNGG 5 cut(s) 771, 899, 1557, 1844, 1969
Bme18I GGWCC 4 cut(s) 773, 1264, 1334, 1687
BmgT120I GGNCC 7 cut(s) 348, 508, 773, 1264, 1334, 1687, 1965
BmiI GGNNCC 3 cut(s) 768, 1525, 1811
BmrFI CCNGG 5 cut(s) 771, 899, 1557, 1844, 1969
BmsI GCATC 3 cut(s) 849, 1221, 1357
BpiI GAAGAC 1 cut(s) 2279
BplI GAGNNNNNCTC 2 cut(s) 1253, 1285
BpmI CTGGAG 1 cut(s) 753
Bpu14I TTCGAA 1 cut(s) 2169
BpuEI CTTGAG 1 cut(s) 2312
BsaAI YACGTR 1 cut(s) 2041
BsaBI GATNNNNATC 1 cut(s) 783
BsaJI CCNNGG 4 cut(s) 188, 215, 1555, 2147
BsaXI ACNNNNNCTCC 2 cut(s) 1616, 1646
Bsc4I CCNNNNNNNGG 4 cut(s) 263, 591, 1208, 1806
Bse118I RCCGGY 1 cut(s) 1676
Bse1I ACTGG 2 cut(s) 52, 288
Bse21I CCTNAGG 1 cut(s) 927
Bse3DI GCAATG 1 cut(s) 750
Bse8I GATNNNNATC 1 cut(s) 783
BseBI CCWGG 5 cut(s) 771, 899, 1557, 1844, 1969
BseDI CCNNGG 4 cut(s) 188, 215, 1555, 2147
BseGI GGATG 2 cut(s) 1212, 1861
BseJI GATNNNNATC 1 cut(s) 783
BseLI CCNNNNNNNGG 4 cut(s) 263, 591, 1208, 1806
BseMI GCAATG 1 cut(s) 750
BseMII CTCAG 5 cut(s) 76, 621, 918, 1409, 1842
BseNI ACTGG 2 cut(s) 52, 288
BseRI GAGGAG 2 cut(s) 2129, 2239
BseXI GCAGC 6 cut(s) 727, 1596, 1836, 1932, 2061, 2209
BseYI CCCAGC 2 cut(s) 256, 2316
BshNI GGYRCC 1 cut(s) 1523
BsiHKAI GWGCWC 1 cut(s) 2130
BsiSI CCGG 3 cut(s) 1037, 1677, 1853
BslFI GGGAC 4 cut(s) 827, 1473, 1584, 1700
BslI CCNNNNNNNGG 4 cut(s) 263, 591, 1208, 1806
BsmAI GTCTC 3 cut(s) 287, 2053, 2111
BsmFI GGGAC 4 cut(s) 827, 1473, 1584, 1700
Bsp119I TTCGAA 1 cut(s) 2169
Bsp1286I GDGCHC 1 cut(s) 2130
Bsp143I GATC 7 cut(s) 25, 271, 678, 1095, 1225, 1809, 2107
Bsp19I CCATGG 1 cut(s) 215
BspACI CCGC 3 cut(s) 1510, 1768, 2077
BspCNI CTCAG 5 cut(s) 75, 622, 919, 1408, 1841
BspHI TCATGA 2 cut(s) 1092, 1275
BspLI GGNNCC 3 cut(s) 768, 1525, 1811
BspMAI CTGCAG 1 cut(s) 1614
BspMI ACCTGC 1 cut(s) 1507
BspPI GGATC 4 cut(s) 279, 1220, 1804, 1817
BspQI GCTCTTC 1 cut(s) 597
BspT104I TTCGAA 1 cut(s) 2169
BspT107I GGYRCC 1 cut(s) 1523
BsrDI GCAATG 1 cut(s) 750
BsrFI RCCGGY 1 cut(s) 1676
BsrI ACTGG 2 cut(s) 52, 288
BssAI RCCGGY 1 cut(s) 1676
BssECI CCNNGG 4 cut(s) 188, 215, 1555, 2147
BssMI GATC 7 cut(s) 25, 271, 678, 1095, 1225, 1809, 2107
BssSI CACGAG 1 cut(s) 2111
BssT1I CCWWGG 3 cut(s) 188, 215, 2147
Bst2BI CACGAG 1 cut(s) 2111
Bst2UI CCWGG 5 cut(s) 771, 899, 1557, 1844, 1969
Bst4CI ACNGT 6 cut(s) 74, 674, 1153, 1239, 1403, 1436
Bst6I CTCTTC 4 cut(s) 491, 597, 720, 1782
BstBAI YACGTR 1 cut(s) 2041
BstBI TTCGAA 1 cut(s) 2169
BstC8I GCNNGC 4 cut(s) 582, 711, 1514, 1986
BstDEI CTNAG 6 cut(s) 62, 630, 927, 1395, 1596, 1828
BstDSI CCRYGG 1 cut(s) 215
BstF5I GGATG 2 cut(s) 1212, 1861
BstH2I RGCGCY 1 cut(s) 1610
BstHHI GCGC 1 cut(s) 1609
BstKTI GATC 7 cut(s) 28, 274, 681, 1098, 1228, 1812, 2110
BstMAI GTCTC 3 cut(s) 287, 2053, 2111
BstMBI GATC 7 cut(s) 25, 271, 678, 1095, 1225, 1809, 2107
BstMWI GCNNNNNNNGC 7 cut(s) 347, 954, 1046, 1162, 1295, 1367, 1420
BstNI CCWGG 5 cut(s) 771, 899, 1557, 1844, 1969
BstNSI RCATGY 3 cut(s) 572, 1293, 2134
BstSCI CCNGG 5 cut(s) 769, 897, 1555, 1842, 1967
BstSFI CTRYAG 4 cut(s) 111, 1610, 1815, 2182
BstV1I GCAGC 6 cut(s) 727, 1596, 1836, 1932, 2061, 2209
BstV2I GAAGAC 1 cut(s) 2279
BstX2I RGATCY 1 cut(s) 1809
BstYI RGATCY 1 cut(s) 1809
Bsu36I CCTNAGG 1 cut(s) 927
BsuI GTATCC 2 cut(s) 408, 1517
BtgI CCRYGG 1 cut(s) 215
BtgZI GCGATG 2 cut(s) 567, 1901
BtsCI GGATG 2 cut(s) 1212, 1861
BtsIMutI CAGTG 3 cut(s) 178, 281, 679
BveI ACCTGC 1 cut(s) 1507
Cac8I GCNNGC 4 cut(s) 582, 711, 1514, 1986
CaiI CAGNNNCTG 1 cut(s) 776
CciI TCATGA 2 cut(s) 1092, 1275
CfoI GCGC 1 cut(s) 1609
Cfr10I RCCGGY 1 cut(s) 1676
Cfr13I GGNCC 7 cut(s) 348, 508, 773, 1264, 1334, 1687, 1965
CseI GACGC 1 cut(s) 1431
CsiI ACCWGGT 1 cut(s) 897
Csp6I GTAC 2 cut(s) 137, 1240
CviQI GTAC 2 cut(s) 137, 1240
DdeI CTNAG 6 cut(s) 62, 630, 927, 1395, 1596, 1828
DpnI GATC 7 cut(s) 27, 273, 680, 1097, 1227, 1811, 2109
DpnII GATC 7 cut(s) 25, 271, 678, 1095, 1225, 1809, 2107
DraI TTTAAA 2 cut(s) 762, 2031
EaeI YGGCCR 3 cut(s) 230, 1850, 2035
Eam1104I CTCTTC 4 cut(s) 491, 597, 720, 1782
EarI CTCTTC 4 cut(s) 491, 597, 720, 1782
Eco130I CCWWGG 3 cut(s) 188, 215, 2147
Eco147I AGGCCT 2 cut(s) 1314, 2175
Eco32I GATATC 1 cut(s) 785
Eco47I GGWCC 4 cut(s) 773, 1264, 1334, 1687
Eco57I CTGAAG 1 cut(s) 1806
Eco72I CACGTG 1 cut(s) 2041
Eco81I CCTNAGG 1 cut(s) 927
EcoO109I RGGNCCY 5 cut(s) 508, 773, 1264, 1687, 1965
EcoRII CCWGG 5 cut(s) 769, 897, 1555, 1842, 1967
EcoRV GATATC 1 cut(s) 785
EcoT14I CCWWGG 3 cut(s) 188, 215, 2147
ErhI CCWWGG 3 cut(s) 188, 215, 2147
FalI AAGNNNNNCTT 2 cut(s) 420, 452
FaqI GGGAC 4 cut(s) 827, 1473, 1584, 1700
FbaI TGATCA 2 cut(s) 1095, 2107
FblI GTMKAC 1 cut(s) 1933
Fnu4HI GCNGC 7 cut(s) 741, 1610, 1769, 1825, 1921, 2075, 2198
FokI GGATG 2 cut(s) 1199, 1868
Fsp4HI GCNGC 7 cut(s) 741, 1610, 1769, 1825, 1921, 2075, 2198
FspBI CTAG 2 cut(s) 2277, 2344
GlaI GCGC 1 cut(s) 1608
GluI GCNGC 7 cut(s) 741, 1610, 1769, 1825, 1921, 2075, 2198
GsaI CCCAGC 2 cut(s) 260, 2320
GsuI CTGGAG 1 cut(s) 753
HaeII RGCGCY 1 cut(s) 1610
HapII CCGG 3 cut(s) 1037, 1677, 1853
HgaI GACGC 1 cut(s) 1431
HhaI GCGC 1 cut(s) 1609
Hin6I GCGC 1 cut(s) 1607
HinP1I GCGC 1 cut(s) 1607
HincII GTYRAC 2 cut(s) 670, 1126
HindII GTYRAC 2 cut(s) 670, 1126
HindIII AAGCTT 2 cut(s) 339, 434
HinfI GANTC 4 cut(s) 116, 224, 871, 1085
HpaII CCGG 3 cut(s) 1037, 1677, 1853
HphI GGTGA 6 cut(s) 242, 587, 662, 1144, 1227, 1340
Hpy166II GTNNAC 6 cut(s) 180, 624, 670, 1126, 1334, 1934
Hpy188I TCNGA 9 cut(s) 58, 65, 271, 631, 870, 1217, 1398, 1831, 2244
Hpy8I GTNNAC 6 cut(s) 180, 624, 670, 1126, 1334, 1934
HpyAV CCTTC 9 cut(s) 315, 521, 1003, 1361, 1594, 1615, 1673, 1947, 2165
HpyCH4III ACNGT 6 cut(s) 74, 674, 1153, 1239, 1403, 1436
HpyCH4IV ACGT 3 cut(s) 516, 1754, 2040
HpyF10VI GCNNNNNNNGC 7 cut(s) 347, 954, 1046, 1162, 1295, 1367, 1420
HpyF3I CTNAG 6 cut(s) 62, 630, 927, 1395, 1596, 1828
HpySE526I ACGT 3 cut(s) 516, 1754, 2040
HspAI GCGC 1 cut(s) 1607
Ksp22I TGATCA 2 cut(s) 1095, 2107
Kzo9I GATC 7 cut(s) 25, 271, 678, 1095, 1225, 1809, 2107
LguI GCTCTTC 1 cut(s) 597
LmnI GCTCC 3 cut(s) 468, 772, 1928
Lsp1109I GCAGC 6 cut(s) 727, 1596, 1836, 1932, 2061, 2209
LweI GCATC 3 cut(s) 849, 1221, 1357
MabI ACCWGGT 1 cut(s) 897
MaeI CTAG 2 cut(s) 2277, 2344
MaeII ACGT 3 cut(s) 516, 1754, 2040
MaeIII GTNAC 3 cut(s) 248, 1187, 1993
MalI GATC 7 cut(s) 27, 273, 680, 1097, 1227, 1811, 2109
MboI GATC 7 cut(s) 25, 271, 678, 1095, 1225, 1809, 2107
MfeI CAATTG 1 cut(s) 2121
MflI RGATCY 1 cut(s) 1809
MhlI GDGCHC 1 cut(s) 2130
MlsI TGGCCA 2 cut(s) 232, 2037
MluNI TGGCCA 2 cut(s) 232, 2037
MlyI GAGTC 2 cut(s) 233, 880
MmeI TCCRAC 1 cut(s) 1240
Mox20I TGGCCA 2 cut(s) 232, 2037
MroXI GAANNNNTTC 2 cut(s) 73, 620
MscI TGGCCA 2 cut(s) 232, 2037
MslI CAYNNNNRTG 3 cut(s) 567, 573, 1989
Msp20I TGGCCA 2 cut(s) 232, 2037
MspI CCGG 3 cut(s) 1037, 1677, 1853
MspR9I CCNGG 5 cut(s) 771, 899, 1557, 1844, 1969
MunI CAATTG 1 cut(s) 2121
MvaI CCWGG 5 cut(s) 771, 899, 1557, 1844, 1969
MwoI GCNNNNNNNGC 7 cut(s) 347, 954, 1046, 1162, 1295, 1367, 1420
NcoI CCATGG 1 cut(s) 215
NdeII GATC 7 cut(s) 25, 271, 678, 1095, 1225, 1809, 2107
NlaIV GGNNCC 3 cut(s) 768, 1525, 1811
NmuCI GTSAC 2 cut(s) 248, 1993
NspI RCATGY 3 cut(s) 572, 1293, 2134
NspV TTCGAA 1 cut(s) 2169
PagI TCATGA 2 cut(s) 1092, 1275
PaqCI CACCTGC 1 cut(s) 1507
PceI AGGCCT 2 cut(s) 1314, 2175
PciI ACATGT 1 cut(s) 2130
PciSI GCTCTTC 1 cut(s) 597
PcsI WCGNNNNNNNCGW 1 cut(s) 1411
PdmI GAANNNNTTC 2 cut(s) 73, 620
PfeI GAWTC 2 cut(s) 116, 1085
PkrI GCNGC 7 cut(s) 742, 1611, 1770, 1826, 1922, 2076, 2199
PleI GAGTC 2 cut(s) 232, 879
PmaCI CACGTG 1 cut(s) 2041
PmlI CACGTG 1 cut(s) 2041
PpsI GAGTC 2 cut(s) 232, 879
Ppu21I YACGTR 1 cut(s) 2041
PpuMI RGGWCCY 3 cut(s) 773, 1264, 1687
PscI ACATGT 1 cut(s) 2130
PshBI ATTAAT 1 cut(s) 645
PsiI TTATAA 1 cut(s) 2064
Psp1406I AACGTT 1 cut(s) 1754
Psp5II RGGWCCY 3 cut(s) 773, 1264, 1687
Psp6I CCWGG 5 cut(s) 769, 897, 1555, 1842, 1967
PspCI CACGTG 1 cut(s) 2041
PspFI CCCAGC 2 cut(s) 256, 2316
PspGI CCWGG 5 cut(s) 769, 897, 1555, 1842, 1967
PspN4I GGNNCC 3 cut(s) 768, 1525, 1811
PspPI GGNCC 7 cut(s) 348, 508, 773, 1264, 1334, 1687, 1965
PspPPI RGGWCCY 3 cut(s) 773, 1264, 1687
PstI CTGCAG 1 cut(s) 1614
PstNI CAGNNNCTG 1 cut(s) 776
PsuI RGATCY 1 cut(s) 1809
RsaI GTAC 2 cut(s) 138, 1241
RsaNI GTAC 2 cut(s) 137, 1240
RseI CAYNNNNRTG 3 cut(s) 567, 573, 1989
SapI GCTCTTC 1 cut(s) 597
SatI GCNGC 7 cut(s) 741, 1610, 1769, 1825, 1921, 2075, 2198
Sau3AI GATC 7 cut(s) 25, 271, 678, 1095, 1225, 1809, 2107
Sau96I GGNCC 7 cut(s) 348, 508, 773, 1264, 1334, 1687, 1965
SchI GAGTC 2 cut(s) 233, 880
ScrFI CCNGG 5 cut(s) 771, 899, 1557, 1844, 1969
SduI GDGCHC 1 cut(s) 2130
SexAI ACCWGGT 1 cut(s) 897
SfaNI GCATC 3 cut(s) 849, 1221, 1357
SfcI CTRYAG 4 cut(s) 111, 1610, 1815, 2182
SfuI TTCGAA 1 cut(s) 2169
SinI GGWCC 4 cut(s) 773, 1264, 1334, 1687
SmiMI CAYNNNNRTG 3 cut(s) 567, 573, 1989
SmlI CTYRAG 1 cut(s) 2327
SmoI CTYRAG 1 cut(s) 2327
SseBI AGGCCT 2 cut(s) 1314, 2175
SsiI CCGC 3 cut(s) 1510, 1768, 2077
SspI AATATT 2 cut(s) 809, 889
SspMI CTAG 2 cut(s) 2277, 2344
StuI AGGCCT 2 cut(s) 1314, 2175
StyD4I CCNGG 5 cut(s) 769, 897, 1555, 1842, 1967
StyI CCWWGG 3 cut(s) 188, 215, 2147
TaaI ACNGT 6 cut(s) 74, 674, 1153, 1239, 1403, 1436
TaiI ACGT 3 cut(s) 519, 1757, 2043
TaqI TCGA 4 cut(s) 28, 1781, 2169, 2340
TaqII GACCGA 1 cut(s) 1078
TatI WGTACW 1 cut(s) 136
TauI GCSGC 1 cut(s) 1771
TfiI GAWTC 2 cut(s) 116, 1085
TscAI CASTG 3 cut(s) 178, 288, 679
TseFI GTSAC 2 cut(s) 248, 1993
TseI GCWGC 6 cut(s) 740, 1609, 1824, 1920, 2074, 2197
Tsp45I GTSAC 2 cut(s) 248, 1993
TspDTI ATGAA 7 cut(s) 232, 392, 543, 843, 1136, 1151, 1892
TspGWI ACGGA 2 cut(s) 1822, 1915
TspRI CASTG 3 cut(s) 178, 288, 679
VpaK11BI GGWCC 4 cut(s) 773, 1264, 1334, 1687
VspI ATTAAT 1 cut(s) 645
XapI RAATTY 5 cut(s) 792, 915, 1138, 2004, 2202
XceI RCATGY 3 cut(s) 572, 1293, 2134
XmiI GTMKAC 1 cut(s) 1933
XmnI GAANNNNTTC 2 cut(s) 73, 620
XspI CTAG 2 cut(s) 2277, 2344
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.