Prupe.2G121700_v2.0.a1

Endoglucanase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
17892111 .. 17894939
2829 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G121700.1

Sequence Viewer

Length: 1524 bp
ATGAGTAAAATCATGTGTACTAGTTACCTTTCAGGGGTGTTAATATTAGCTTGGATGTTGACAATGGCCGCAGCACAAAACTCTGGTTCGCATAACTACGCTGACGCTTTGTCAAAGTGCCTTATGTTTTTTGAAGGCCAAAGGTCAGGCAAGTTACCACCTTCACAACGAATTACTTGGAGGAAAGATTCTGGTCTAAAGGATGGCTCTGATGTTGGTATGGATCTTGTAGGAGGTTACTATGATGCGGGGGACAATGTGAAGTTCAACTTTCCCATGGCATTCACAACAACAATGTTGTCATGGAGTGTTCTAGAATTCGGACAATTGATGGGCTCGGAACTTCCACATGCTCTAGAAGCCATCAGATGGGGGTCTGATTATTTGCTTAAATCCACAAGTGTTCCTGATTCTGTTGTTGGTGTGGTTGGTGACCCCAATGGCGACCACACTTGTTGGGAAAGGCCTGAAGACATGACCACCCCTCGAACCACTTATGTTGTGAACAAAGAAAAGCCAGGATCAGAGGTTGCAGCTGAGACTGCAGCTGCACTTGCAGCTTCTTCCATGGTGTTTAAAGATTCAGACAAATTCTACTCAGCTTCGCTGCTTAATCGATCTATCCAGGTGTTTGAATTCGCAGATAAGTATAGGGGGTCTTATAATGACAGTATTGGTGAGGGAGCTTGCCCTTTTTACTGTGATTTCAGTGGCTACAAGGATGAACTGATTTGGGGAGCTGCGTGGTTATACAAGGCTACTAAGATACCACAATATTGGGACTATGTCAAAAACAACATACAGTTTTTGGGACCCACAGTAGTAAGAAATATAAATGGCATTCTTGTTGCGTCCTTAACTGGTGATGTCACTGAATTTGGATGGGATTCAAAACATGCCGGCATCAACATACTTGTTTCTCAGTGGGTAATGACTGATCCCAACAATGCTAATCCCTTTATTCCCAAGGCGGACCAGCTTGTCTGCTCTATTTTGCCTCAATCACCTGCTCAAAAATCAGTCACCTATTCACCAGGTGGACTCTTGTTCAAGCCTGGAGGAAGTAACCTGCAACATTCAACATCCCTATCATTTCTTCTTATGGCTTATGCTGGCTACATGAAAGCTTCCAACAAAGTGATCGATTGTGGCAATAATTTCGTTGTCACTCCAGCTAGCCTAGTGAATTTCACCAAAGGACAGGTTGATTATATACTAGGAAGCAACCCACTAGGGATGTCATATATGGTGGGATATGGGCAAAAGTTTCCTCAGAAAATACATCACCGTGGCTCAGTCAATCCTTCCATGGAAAACAACCTACAACAAATGCAGTGCCATGAAGGAGACTTGTATTTCAAAAGCAACGATCCAAACCCTAACATATTAGTAGGTGCAATTGTGGGAGGGCCTGCCGAGGATGATACATTTGAAGATTCTCGATCCAATGTTCAACAATCGGAGCCAACCACATATATCAATGCACCTTTTGTGGGTGTATTGGCTAACTTTTTGAAAGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

508

Amino Acids

55.48

Weight (kDa)

5.34

Isoelectric Point (pI)

40.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000663)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 663
AarI CACCTGC 1 cut(s) 1015
AasI GACNNNNNNGTC 1 cut(s) 980
Acc36I ACCTGC 2 cut(s) 1015, 1077
AccB7I CCANNNNNTGG 1 cut(s) 369
AciI CCGC 3 cut(s) 69, 248, 971
AclWI GGATC 5 cut(s) 231, 529, 932, 1364, 1437
AcoI YGGCCR 1 cut(s) 66
AcsI RAATTY 5 cut(s) 317, 590, 635, 875, 1186
AcuI CTGAAG 1 cut(s) 489
AdeI CACNNNGTG 1 cut(s) 1037
AfaI GTAC 1 cut(s) 19
AfiI CCNNNNNNNGG 3 cut(s) 34, 369, 1493
AhdI GACNNNNNGTC 1 cut(s) 109
AhlI ACTAGT 1 cut(s) 20
AjnI CCWGG 4 cut(s) 517, 624, 1033, 1054
Alw26I GTCTC 2 cut(s) 533, 1341
AlwI GGATC 5 cut(s) 231, 529, 932, 1364, 1437
AoxI GGCC 4 cut(s) 66, 136, 464, 1409
ApeKI GCWGC 7 cut(s) 71, 533, 545, 548, 557, 607, 740
ApoI RAATTY 5 cut(s) 317, 590, 635, 875, 1186
AspS9I GGNCC 3 cut(s) 812, 973, 1409
AsuHPI GGTGA 8 cut(s) 443, 689, 875, 996, 1015, 1023, 1183, 1277
AsuNHI GCTAGC 1 cut(s) 1175
AvaII GGWCC 2 cut(s) 812, 973
BanII GRGCYC 1 cut(s) 338
BbsI GAAGAC 1 cut(s) 477
BbvI GCAGC 7 cut(s) 83, 535, 545, 557, 569, 594, 727
BccI CCATC 5 cut(s) 197, 325, 363, 371, 876
BcgI CGANNNNNNTGC 2 cut(s) 1141, 1175
BciT130I CCWGG 4 cut(s) 519, 626, 1035, 1056
BcoDI GTCTC 2 cut(s) 533, 1341
BcuI ACTAGT 1 cut(s) 20
BfaI CTAG 7 cut(s) 21, 314, 356, 1176, 1181, 1217, 1232
BfmI CTRYAG 1 cut(s) 543
BfuAI ACCTGC 2 cut(s) 1015, 1077
BisI GCNGC 8 cut(s) 69, 72, 534, 546, 549, 558, 608, 741
BlsI GCNGC 8 cut(s) 70, 73, 535, 547, 550, 559, 609, 742
Bme1390I CCNGG 4 cut(s) 519, 626, 1035, 1056
Bme18I GGWCC 2 cut(s) 812, 973
BmeRI GACNNNNNGTC 1 cut(s) 109
BmgT120I GGNCC 3 cut(s) 812, 973, 1409
BmiI GGNNCC 3 cut(s) 813, 814, 1464
BmrFI CCNGG 4 cut(s) 519, 626, 1035, 1056
BmsI GCATC 2 cut(s) 235, 912
BmtI GCTAGC 1 cut(s) 1179
BpiI GAAGAC 1 cut(s) 477
BpmI CTGGAG 2 cut(s) 1077, 1155
Bsa29I ATCGAT 2 cut(s) 616, 1143
BsaJI CCNNGG 6 cut(s) 276, 567, 966, 1288, 1308, 1416
Bsc4I CCNNNNNNNGG 3 cut(s) 34, 369, 1493
Bse118I RCCGGY 1 cut(s) 899
Bse1I ACTGG 1 cut(s) 865
BseBI CCWGG 4 cut(s) 519, 626, 1035, 1056
BseCI ATCGAT 2 cut(s) 616, 1143
BseDI CCNNGG 6 cut(s) 276, 567, 966, 1288, 1308, 1416
BseGI GGATG 7 cut(s) 60, 208, 727, 887, 1082, 1242, 1426
BseLI CCNNNNNNNGG 3 cut(s) 34, 369, 1493
BseMII CTCAG 5 cut(s) 528, 612, 935, 1286, 1308
BseNI ACTGG 1 cut(s) 865
BseXI GCAGC 7 cut(s) 83, 535, 545, 557, 569, 594, 727
BsgI GTGCAG 1 cut(s) 534
BshFI GGCC 4 cut(s) 68, 138, 466, 1411
BshVI ATCGAT 2 cut(s) 616, 1143
BsiSI CCGG 1 cut(s) 900
BslFI GGGAC 3 cut(s) 266, 794, 825
BslI CCNNNNNNNGG 3 cut(s) 34, 369, 1493
BsmAI GTCTC 2 cut(s) 533, 1341
BsmFI GGGAC 3 cut(s) 266, 794, 825
BsmI GAATGC 2 cut(s) 281, 840
BsnI GGCC 4 cut(s) 68, 138, 466, 1411
Bsp1286I GDGCHC 1 cut(s) 338
Bsp143I GATC 7 cut(s) 223, 521, 617, 937, 1140, 1369, 1442
Bsp19I CCATGG 3 cut(s) 276, 567, 1308
BspACI CCGC 3 cut(s) 69, 248, 971
BspANI GGCC 4 cut(s) 68, 138, 466, 1411
BspCNI CTCAG 5 cut(s) 529, 611, 934, 1285, 1307
BspDI ATCGAT 2 cut(s) 616, 1143
BspLI GGNNCC 3 cut(s) 813, 814, 1464
BspMAI CTGCAG 1 cut(s) 547
BspMI ACCTGC 2 cut(s) 1015, 1077
BspOI GCTAGC 1 cut(s) 1179
BspPI GGATC 5 cut(s) 231, 529, 932, 1364, 1437
BsrFI RCCGGY 1 cut(s) 899
BsrI ACTGG 1 cut(s) 865
BssAI RCCGGY 1 cut(s) 899
BssECI CCNNGG 6 cut(s) 276, 567, 966, 1288, 1308, 1416
BssMI GATC 7 cut(s) 223, 521, 617, 937, 1140, 1369, 1442
BssT1I CCWWGG 4 cut(s) 276, 567, 966, 1308
Bst2UI CCWGG 4 cut(s) 519, 626, 1035, 1056
Bst4CI ACNGT 5 cut(s) 671, 701, 804, 820, 1289
BstC8I GCNNGC 5 cut(s) 688, 901, 1114, 1177, 1413
BstDEI CTNAG 6 cut(s) 537, 598, 762, 921, 1272, 1294
BstDSI CCRYGG 4 cut(s) 276, 567, 1288, 1308
BstEII GGTNACC 1 cut(s) 431
BstF5I GGATG 7 cut(s) 60, 208, 727, 887, 1082, 1242, 1426
BstKTI GATC 7 cut(s) 226, 524, 620, 940, 1143, 1372, 1445
BstMAI GTCTC 2 cut(s) 533, 1341
BstMBI GATC 7 cut(s) 223, 521, 617, 937, 1140, 1369, 1442
BstMWI GCNNNNNNNGC 4 cut(s) 359, 542, 554, 557
BstNI CCWGG 4 cut(s) 519, 626, 1035, 1056
BstNSI RCATGY 2 cut(s) 353, 899
BstPI GGTNACC 1 cut(s) 431
BstSCI CCNGG 4 cut(s) 517, 624, 1033, 1054
BstSFI CTRYAG 1 cut(s) 543
BstV1I GCAGC 7 cut(s) 83, 535, 545, 557, 569, 594, 727
BstV2I GAAGAC 1 cut(s) 477
BstX2I RGATCY 1 cut(s) 223
BstXI CCANNNNNNTGG 1 cut(s) 777
BstYI RGATCY 1 cut(s) 223
Bsu15I ATCGAT 2 cut(s) 616, 1143
BsuRI GGCC 4 cut(s) 68, 138, 466, 1411
BsuTUI ATCGAT 2 cut(s) 616, 1143
BtgI CCRYGG 4 cut(s) 276, 567, 1288, 1308
BtsCI GGATG 7 cut(s) 60, 208, 727, 887, 1082, 1242, 1426
BtsI GCAGTG 1 cut(s) 1340
BtsIMutI CAGTG 4 cut(s) 715, 870, 929, 1340
BveI ACCTGC 2 cut(s) 1015, 1077
Cac8I GCNNGC 5 cut(s) 688, 901, 1114, 1177, 1413
Cfr10I RCCGGY 1 cut(s) 899
Cfr13I GGNCC 3 cut(s) 812, 973, 1409
ClaI ATCGAT 2 cut(s) 616, 1143
CseI GACGC 2 cut(s) 113, 840
CsiI ACCWGGT 1 cut(s) 1033
Csp6I GTAC 1 cut(s) 18
CspCI CAANNNNNGTGG 4 cut(s) 437, 472, 481, 516
CviQI GTAC 1 cut(s) 18
DdeI CTNAG 6 cut(s) 537, 598, 762, 921, 1272, 1294
DpnI GATC 7 cut(s) 225, 523, 619, 939, 1142, 1371, 1444
DpnII GATC 7 cut(s) 223, 521, 617, 937, 1140, 1369, 1442
DraI TTTAAA 1 cut(s) 577
DraIII CACNNNGTG 1 cut(s) 1037
DrdI GACNNNNNNGTC 1 cut(s) 980
DriI GACNNNNNGTC 1 cut(s) 109
DseDI GACNNNNNNGTC 1 cut(s) 980
EaeI YGGCCR 1 cut(s) 66
Eam1105I GACNNNNNGTC 1 cut(s) 109
EciI GGCGGA 1 cut(s) 986
Eco130I CCWWGG 4 cut(s) 276, 567, 966, 1308
Eco147I AGGCCT 1 cut(s) 466
Eco24I GRGCYC 1 cut(s) 338
Eco47I GGWCC 2 cut(s) 812, 973
Eco57I CTGAAG 1 cut(s) 489
Eco91I GGTNACC 1 cut(s) 431
EcoO109I RGGNCCY 2 cut(s) 812, 1409
EcoO65I GGTNACC 1 cut(s) 431
EcoRI GAATTC 2 cut(s) 317, 635
EcoRII CCWGG 4 cut(s) 517, 624, 1033, 1054
EcoT14I CCWWGG 4 cut(s) 276, 567, 966, 1308
EcoT38I GRGCYC 1 cut(s) 338
ErhI CCWWGG 4 cut(s) 276, 567, 966, 1308
FalI AAGNNNNNCTT 2 cut(s) 254, 286
FaqI GGGAC 3 cut(s) 266, 794, 825
FauI CCCGC 1 cut(s) 241
Fnu4HI GCNGC 8 cut(s) 69, 72, 534, 546, 549, 558, 608, 741
FokI GGATG 7 cut(s) 67, 215, 734, 894, 1069, 1249, 1433
FriOI GRGCYC 1 cut(s) 338
Fsp4HI GCNGC 8 cut(s) 69, 72, 534, 546, 549, 558, 608, 741
FspBI CTAG 7 cut(s) 21, 314, 356, 1176, 1181, 1217, 1232
GluI GCNGC 8 cut(s) 69, 72, 534, 546, 549, 558, 608, 741
GsuI CTGGAG 2 cut(s) 1077, 1155
HaeIII GGCC 4 cut(s) 68, 138, 466, 1411
HapII CCGG 1 cut(s) 900
HgaI GACGC 2 cut(s) 113, 840
HincII GTYRAC 1 cut(s) 60
HindII GTYRAC 1 cut(s) 60
HindIII AAGCTT 1 cut(s) 1125
HinfI GANTC 6 cut(s) 188, 410, 581, 887, 1041, 1436
HpaII CCGG 1 cut(s) 900
HphI GGTGA 8 cut(s) 443, 689, 875, 996, 1015, 1023, 1183, 1277
Hpy166II GTNNAC 4 cut(s) 18, 60, 505, 1040
Hpy188I TCNGA 9 cut(s) 211, 323, 340, 368, 379, 526, 586, 1275, 1462
Hpy188III TCNNGA 4 cut(s) 314, 356, 407, 1440
Hpy8I GTNNAC 4 cut(s) 18, 60, 505, 1040
HpyAV CCTTC 4 cut(s) 128, 171, 1314, 1337
HpyCH4III ACNGT 5 cut(s) 671, 701, 804, 820, 1289
HpyCH4V TGCA 8 cut(s) 533, 545, 551, 557, 1072, 1333, 1397, 1484
HpyF10VI GCNNNNNNNGC 4 cut(s) 359, 542, 554, 557
HpyF3I CTNAG 6 cut(s) 537, 598, 762, 921, 1272, 1294
KflI GGGWCCC 1 cut(s) 812
KroI GCCGGC 1 cut(s) 899
KroNI GCCGGC 1 cut(s) 901
Kzo9I GATC 7 cut(s) 223, 521, 617, 937, 1140, 1369, 1442
LmnI GCTCC 3 cut(s) 683, 737, 1462
Lsp1109I GCAGC 7 cut(s) 83, 535, 545, 557, 569, 594, 727
LweI GCATC 2 cut(s) 235, 912
MabI ACCWGGT 1 cut(s) 1033
MaeI CTAG 7 cut(s) 21, 314, 356, 1176, 1181, 1217, 1232
MaeIII GTNAC 8 cut(s) 23, 153, 236, 431, 868, 1021, 1064, 1165
MalI GATC 7 cut(s) 225, 523, 619, 939, 1142, 1371, 1444
MboI GATC 7 cut(s) 223, 521, 617, 937, 1140, 1369, 1442
MboII GAAGA 4 cut(s) 482, 555, 1088, 1445
MfeI CAATTG 2 cut(s) 326, 1398
MflI RGATCY 1 cut(s) 223
MhlI GDGCHC 1 cut(s) 338
MluCI AATT 9 cut(s) 171, 317, 326, 590, 635, 875, 1156, 1186, 1398
MlyI GAGTC 1 cut(s) 1035
MmeI TCCRAC 1 cut(s) 1155
MroNI GCCGGC 1 cut(s) 899
MseI TTAA 6 cut(s) 41, 390, 576, 612, 857, 1522
MslI CAYNNNNRTG 1 cut(s) 1287
MspA1I CMGCKG 2 cut(s) 536, 548
MspI CCGG 1 cut(s) 900
MspR9I CCNGG 4 cut(s) 519, 626, 1035, 1056
MunI CAATTG 2 cut(s) 326, 1398
Mva1269I GAATGC 2 cut(s) 281, 840
MvaI CCWGG 4 cut(s) 519, 626, 1035, 1056
MwoI GCNNNNNNNGC 4 cut(s) 359, 542, 554, 557
NaeI GCCGGC 1 cut(s) 901
NcoI CCATGG 3 cut(s) 276, 567, 1308
NdeII GATC 7 cut(s) 223, 521, 617, 937, 1140, 1369, 1442
NgoMIV GCCGGC 1 cut(s) 899
NheI GCTAGC 1 cut(s) 1175
NlaIV GGNNCC 3 cut(s) 813, 814, 1464
NmeAIII GCCGAG 1 cut(s) 1441
NmuCI GTSAC 4 cut(s) 431, 868, 1021, 1165
NspI RCATGY 2 cut(s) 353, 899
PaqCI CACCTGC 1 cut(s) 1015
PceI AGGCCT 1 cut(s) 466
PctI GAATGC 2 cut(s) 281, 840
PdiI GCCGGC 1 cut(s) 901
PfeI GAWTC 5 cut(s) 188, 410, 581, 887, 1436
PflFI GACNNNGTC 1 cut(s) 785
PflMI CCANNNNNTGG 1 cut(s) 369
PkrI GCNGC 8 cut(s) 70, 73, 535, 547, 550, 559, 609, 742
PleI GAGTC 1 cut(s) 1035
PpsI GAGTC 1 cut(s) 1035
PpuMI RGGWCCY 1 cut(s) 812
PsiI TTATAA 1 cut(s) 663
Psp5II RGGWCCY 1 cut(s) 812
Psp6I CCWGG 4 cut(s) 517, 624, 1033, 1054
PspEI GGTNACC 1 cut(s) 431
PspGI CCWGG 4 cut(s) 517, 624, 1033, 1054
PspN4I GGNNCC 3 cut(s) 813, 814, 1464
PspPI GGNCC 3 cut(s) 812, 973, 1409
PspPPI RGGWCCY 1 cut(s) 812
PstI CTGCAG 1 cut(s) 547
PsuI RGATCY 1 cut(s) 223
PsyI GACNNNGTC 1 cut(s) 785
PvuII CAGCTG 2 cut(s) 536, 548
RsaI GTAC 1 cut(s) 19
RsaNI GTAC 1 cut(s) 18
RseI CAYNNNNRTG 1 cut(s) 1287
SaqAI TTAA 6 cut(s) 41, 390, 576, 612, 857, 1522
SatI GCNGC 8 cut(s) 69, 72, 534, 546, 549, 558, 608, 741
Sau3AI GATC 7 cut(s) 223, 521, 617, 937, 1140, 1369, 1442
Sau96I GGNCC 3 cut(s) 812, 973, 1409
SchI GAGTC 1 cut(s) 1035
ScrFI CCNGG 4 cut(s) 519, 626, 1035, 1056
SduI GDGCHC 1 cut(s) 338
SexAI ACCWGGT 1 cut(s) 1033
SfaNI GCATC 2 cut(s) 235, 912
SfcI CTRYAG 1 cut(s) 543
SinI GGWCC 2 cut(s) 812, 973
SmiMI CAYNNNNRTG 1 cut(s) 1287
SpeI ACTAGT 1 cut(s) 20
Sse9I AATT 9 cut(s) 171, 317, 326, 590, 635, 875, 1156, 1186, 1398
SseBI AGGCCT 1 cut(s) 466
SsiI CCGC 3 cut(s) 69, 248, 971
SspI AATATT 2 cut(s) 45, 776
SspMI CTAG 7 cut(s) 21, 314, 356, 1176, 1181, 1217, 1232
StuI AGGCCT 1 cut(s) 466
StyD4I CCNGG 4 cut(s) 517, 624, 1033, 1054
StyI CCWWGG 4 cut(s) 276, 567, 966, 1308
TaaI ACNGT 5 cut(s) 671, 701, 804, 820, 1289
TaqI TCGA 4 cut(s) 487, 616, 1143, 1441
TasI AATT 9 cut(s) 171, 317, 326, 590, 635, 875, 1156, 1186, 1398
TatI WGTACW 1 cut(s) 17
TauI GCSGC 1 cut(s) 71
TfiI GAWTC 5 cut(s) 188, 410, 581, 887, 1436
Tru1I TTAA 6 cut(s) 41, 390, 576, 612, 857, 1522
Tru9I TTAA 6 cut(s) 41, 390, 576, 612, 857, 1522
TscAI CASTG 4 cut(s) 715, 877, 929, 1340
TseFI GTSAC 4 cut(s) 431, 868, 1021, 1165
TseI GCWGC 7 cut(s) 71, 533, 545, 548, 557, 607, 740
Tsp45I GTSAC 4 cut(s) 431, 868, 1021, 1165
TspDTI ATGAA 3 cut(s) 738, 1136, 1356
TspRI CASTG 4 cut(s) 715, 877, 929, 1340
Tth111I GACNNNGTC 1 cut(s) 785
Van91I CCANNNNNTGG 1 cut(s) 369
VpaK11BI GGWCC 2 cut(s) 812, 973
XapI RAATTY 5 cut(s) 317, 590, 635, 875, 1186
XbaI TCTAGA 2 cut(s) 313, 355
XceI RCATGY 2 cut(s) 353, 899
XspI CTAG 7 cut(s) 21, 314, 356, 1176, 1181, 1217, 1232
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.