Rmu_sc0009670.1_g000003

Endoglucanase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009670.1
OG0000663
Physical Location & Seq
Reverse (-)
7658 .. 11756
4099 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009670.1_g000003.1.cds

Sequence Viewer

Length: 1854 bp
atgcccccgcctcaatcccattcccttattcccatttacaccagtagtcaacctatctctgaccctccaaaaagcattccttcccttcttccatataatccattggaaatcggaatgctctcatgtgactctttctgggccccaaccccctcacatcttccacgtgtagcccatcaacccgtgaatggaccatccccacctccctcccaattccctatagcctcattccaatccaccgtcgatcataaattcaacggtgatcattatgataccaaacacattccaacaccgtttttctccaagcccggcccagaaagaccgcgttggaacccgagcaccatactccagtcacatcgaaaaatggcgcgaaatggccttttcttccctggaaatgttcccgcatttcgcgcagcactagtcctctcgctgctcctcctgcttctccacccaaccagcgccggccacgactatcacgacgccctccgcaagagcatcctcttcttcgaaggccagcgctccggcaagctcccacccgatcagcgcctcaaatggcgccgcgactccgcattgcacgacgggtccaccgccggcgttgacttatccggcgggtactacgacgccggcgacaacgtcaagttcggctttccaatggcgttcacgacgactttgctggcgtggagcatcatagacttcgggaggatcatggggtcggagcagaggaacgccgtcaagtccttacgttggggaaccgactacctcctgaaggcgacggcggttcccggcgttgtcttcgtccaggtcggcgacccctactccgaccacaactgctgggagaggccggaagacatggacactcgtcgcacggtgtacaaaatcgaccggaacaacccgggatccgacgtggcaggcgaaaccgccgctgcgctcgccgctgcctccatcgtgttcaggtcacgtgaccccgcttactcgagactgcttctcaatcgagccgttagggttttcgagttcgctgacacccatcgtggtgcgtacagctccagcctcagaaacgccgtgtgccctttttactgcgacgtgaacggcttccaggatgagttactgtggggagcagcgtggttgcacaaagcatcaagaaggcgccattacagagaatacatagtgagaaacgaggtggtgttgagagctggagataccattaacgagtttggttgggataacaagcatgctgggattaatgtcctcatttctaaggaagtgcttatgggaaaagcagattatttcgaatctttcaagcagaatgcagatggatttatatgctccgttttgcctggacttacccatacccaagtccaatattctccaggtggtttgatcttcaagcctggagggagtaacatgcagcatgtaacttcgctttcgttcctacttttgacttattcgaactatctaagccattccaataagaacgtgccatgtggcatgtcctccgcctcccctgccttcctcaaacaattggctaaacgccaggtggactacattttgggggacaatccattgaggatgtcttacatggttggatatgggccgcgttacccacagaggatacaccaccggggcagctcacttccgtcagttcaggcccatcctgctcgtatcggatgcaaagcaggttctcgctattatctgagtccaaatccgaacccgaacctgctggttggggcggtcgtggggggacccaatagctcggatgcatttccagactcaaggccttactttcaagaatctgagcccacgacgtacatcaatgccccgctcgtgggcctactttcatattttgcagcccactattga

Protein Analysis

617

Amino Acids

68.48

Weight (kDa)

9.19

Isoelectric Point (pI)

51.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000663)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G23210 AT1G70710
fragaria_vesca FvH4_4g33940 FvH4_6g41450 FvH4_7g27772 FvH4_7g27773 FvH4_7g27774 FvH4_7g27775
malus_domestica MD00G1036700.v1.1 MD07G1097500.v1.1 MD11G1195000.v1.1 MD16G1021500.v1.1
prunus_persica Prupe.1G331000_v2.0.a1 Prupe.1G331000_v2.0.a1 Prupe.2G121700_v2.0.a1 Prupe.2G278700_v2.0.a1 Prupe.2G278800_v2.0.a1
pyrus_communis pycom01g19480 pycom03g11560 pycom06g08760 pycom16g01920
rosa_chinensis RchiOBHm_Chr1g0374571 RchiOBHm_Chr1g0374581 RchiOBHm_Chr1g0374591 RchiOBHm_Chr1g0374601 RchiOBHm_Chr1g0374611 RchiOBHm_Chr2g0157011 RchiOBHm_Chr4g0443471
rosa_laevigata RLG00000005926 RLG00000026724 RLG00000026725 RLG00000026726 RLG00000026727
rosa_multiflora Rmu_co8114132.1_g000001 Rmu_sc0004947.1_g000005 Rmu_sc0004947.1_g000006 Rmu_sc0004947.1_g000007 Rmu_sc0004947.1_g000008 Rmu_sc0009670.1_g000003 Rmu_sc0034696.1_g000001 Rmu_sc0037664.1_g000001 Rmu_ssc0000408.1_g000014
rosa_roxburghii Rroxscaffold_4G00283360 Rroxscaffold_4G00283370 Rroxscaffold_4G00283380 Rroxscaffold_5G00384020
rosa_rugosa Rorug01G0059600 Rorug01G0384100 Rorug01G0384200 Rorug01G0384200 Rorug02G0457500 Rorug04G0346500 Rorug04G0346500 Rorug07G0215300
rosa_samantha Rh1AG395000 Rh1AG395100 Rh1AG395200 Rh1AG395400 Rh1CG372800 Rh1CG372900 Rh1CG373000 Rh1CG373100 Rh1DG390300 Rh1DG390400 Rh1DG390500 Rh1DG390600 Rh2BG536600 Rh2DG545500 Rh4AG402000 Rh4CG429100 Rh4DG409100
rosa_wichuraiana Rw1G035030 Rw1G035040 Rw1G035050 Rw1G035060 Rw4G034660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1661, 1719
AccB1I GGYRCC 2 cut(s) 552, 1140
AccBSI CCGCTC 1 cut(s) 1816
AccII CGCG 5 cut(s) 322, 367, 408, 558, 1591
AclWI GGATC 3 cut(s) 707, 888, 901
AcoI YGGCCR 1 cut(s) 460
AcsI RAATTY 1 cut(s) 248
AcuI CTGAAG 1 cut(s) 782
AcvI CACGTG 2 cut(s) 164, 956
AcyI GRCGYC 4 cut(s) 477, 553, 618, 1141
AfaI GTAC 4 cut(s) 611, 869, 1034, 1802
AfeI AGCGCT 1 cut(s) 515
AfiI CCNNNNNNNGG 5 cut(s) 185, 741, 763, 1819, 1820
AflIII ACRYGT 1 cut(s) 163
AgsI TTSAA 4 cut(s) 253, 1294, 1381, 1781
AhlI ACTAGT 1 cut(s) 415
AjiI CACGTC 2 cut(s) 901, 1078
AjnI CCWGG 7 cut(s) 385, 795, 1089, 1330, 1363, 1384, 1527
AluBI AGCT 5 cut(s) 526, 1038, 1187, 1623, 1746
AluI AGCT 5 cut(s) 526, 1038, 1187, 1623, 1746
Alw21I GWGCWC 1 cut(s) 338
Alw26I GTCTC 1 cut(s) 967
AlwI GGATC 3 cut(s) 707, 888, 901
Ama87I CYCGRG 3 cut(s) 331, 889, 970
Aor51HI AGCGCT 1 cut(s) 515
ApaI GGGCCC 1 cut(s) 142
ApeKI GCWGC 8 cut(s) 410, 427, 920, 932, 1112, 1402, 1620, 1841
ApoI RAATTY 1 cut(s) 248
AseI ATTAAT 1 cut(s) 1236
Asp700I GAANNNNTTC 1 cut(s) 1085
AspLEI GCGC 8 cut(s) 367, 410, 458, 516, 543, 555, 925, 1143
AspS9I GGNCC 9 cut(s) 138, 139, 188, 308, 579, 1586, 1642, 1736, 1822
AsuC2I CCSGG 5 cut(s) 306, 780, 890, 891, 1616
AsuHPI GGTGA 1 cut(s) 269
AsuII TTCGAA 3 cut(s) 504, 1284, 1442
AvaI CYCGRG 3 cut(s) 331, 889, 970
AvaII GGWCC 3 cut(s) 188, 579, 1736
BaeGI GKGCMC 2 cut(s) 142, 1064
BamHI GGATCC 1 cut(s) 893
BanI GGYRCC 2 cut(s) 552, 1140
BanII GRGCYC 2 cut(s) 142, 1794
BauI CACGAG 1 cut(s) 1817
BbrPI CACGTG 2 cut(s) 164, 956
BbsI GAAGAC 2 cut(s) 781, 849
Bbv12I GWGCWC 1 cut(s) 338
BbvI GCAGC 7 cut(s) 414, 422, 907, 919, 1124, 1414, 1632
BccI CCATC 6 cut(s) 180, 199, 947, 1029, 1301, 1653
BceAI ACGGC 5 cut(s) 710, 786, 977, 1040, 1099
BcgI CGANNNNNNTGC 2 cut(s) 649, 683
BciT130I CCWGG 7 cut(s) 387, 797, 1091, 1332, 1365, 1386, 1529
BciVI GTATCC 1 cut(s) 1599
BclI TGATCA 1 cut(s) 259
BcnI CCSGG 5 cut(s) 306, 780, 890, 891, 1616
BcoDI GTCTC 1 cut(s) 967
BcuI ACTAGT 1 cut(s) 415
BfaI CTAG 1 cut(s) 416
BfmI CTRYAG 1 cut(s) 216
BfoI RGCGCY 5 cut(s) 459, 517, 544, 556, 1144
BfuAI ACCTGC 2 cut(s) 1661, 1719
BfuI GTATCC 1 cut(s) 1599
Bme18I GGWCC 3 cut(s) 188, 579, 1736
BmeT110I CYCGRG 3 cut(s) 331, 889, 970
BmgBI CACGTC 2 cut(s) 901, 1078
BmgT120I GGNCC 9 cut(s) 138, 139, 188, 308, 579, 1586, 1642, 1736, 1822
BmsI GCATC 5 cut(s) 501, 690, 1139, 1652, 1741
BoxI GACNNNNGTC 1 cut(s) 855
BpiI GAAGAC 2 cut(s) 781, 849
BpmI CTGGAG 5 cut(s) 329, 1024, 1209, 1347, 1407
Bpu14I TTCGAA 3 cut(s) 504, 1284, 1442
BpuEI CTTGAG 1 cut(s) 1750
BpuMI CCSGG 5 cut(s) 306, 780, 890, 891, 1616
BsaAI YACGTR 2 cut(s) 164, 956
BsaHI GRCGYC 4 cut(s) 477, 553, 618, 1141
BsaJI CCNNGG 3 cut(s) 385, 889, 1615
BsaWI WCCGGW 1 cut(s) 879
BsaXI ACNNNNNCTCC 2 cut(s) 797, 827
Bsc4I CCNNNNNNNGG 5 cut(s) 185, 741, 763, 1819, 1820
Bse118I RCCGGY 3 cut(s) 458, 587, 620
Bse1I ACTGG 2 cut(s) 42, 346
Bse3DI GCAATG 1 cut(s) 566
BseBI CCWGG 7 cut(s) 387, 797, 1091, 1332, 1365, 1386, 1529
BseDI CCNNGG 3 cut(s) 385, 889, 1615
BseGI GGATG 7 cut(s) 191, 492, 1099, 1569, 1645, 1667, 1756
BseLI CCNNNNNNNGG 5 cut(s) 185, 741, 763, 1819, 1820
BseMI GCAATG 1 cut(s) 566
BseMII CTCAG 3 cut(s) 1060, 1679, 1779
BseNI ACTGG 2 cut(s) 42, 346
BseRI GAGGAG 1 cut(s) 422
BseSI GKGCMC 2 cut(s) 142, 1064
BseXI GCAGC 7 cut(s) 414, 422, 907, 919, 1124, 1414, 1632
BseYI CCCAGC 2 cut(s) 828, 1229
Bsh1236I CGCG 5 cut(s) 322, 367, 408, 558, 1591
Bsh1285I CGRYCG 2 cut(s) 880, 1728
BshNI GGYRCC 2 cut(s) 552, 1140
BsiEI CGRYCG 2 cut(s) 880, 1728
BsiHKAI GWGCWC 1 cut(s) 338
BsiHKCI CYCGRG 3 cut(s) 331, 889, 970
BslFI GGGAC 2 cut(s) 1562, 1749
BslI CCNNNNNNNGG 5 cut(s) 185, 741, 763, 1819, 1820
BsmAI GTCTC 1 cut(s) 967
BsmFI GGGAC 2 cut(s) 1562, 1749
BsmI GAATGC 3 cut(s) 75, 120, 1306
BsoBI CYCGRG 3 cut(s) 331, 889, 970
Bsp119I TTCGAA 3 cut(s) 504, 1284, 1442
Bsp120I GGGCCC 1 cut(s) 138
Bsp1286I GDGCHC 4 cut(s) 142, 338, 1064, 1794
Bsp1407I TGTACA 1 cut(s) 867
Bsp143I GATC 6 cut(s) 241, 259, 535, 699, 893, 1374
BspCNI CTCAG 3 cut(s) 1059, 1680, 1780
BspFNI CGCG 5 cut(s) 322, 367, 408, 558, 1591
BspMI ACCTGC 2 cut(s) 1661, 1719
BspPI GGATC 3 cut(s) 707, 888, 901
BspT104I TTCGAA 3 cut(s) 504, 1284, 1442
BspT107I GGYRCC 2 cut(s) 552, 1140
BsrBI CCGCTC 1 cut(s) 1816
BsrDI GCAATG 1 cut(s) 566
BsrFI RCCGGY 3 cut(s) 458, 587, 620
BsrGI TGTACA 1 cut(s) 867
BsrI ACTGG 2 cut(s) 42, 346
BssAI RCCGGY 3 cut(s) 458, 587, 620
BssECI CCNNGG 3 cut(s) 385, 889, 1615
BssMI GATC 6 cut(s) 241, 259, 535, 699, 893, 1374
BssNI GRCGYC 4 cut(s) 477, 553, 618, 1141
BssSI CACGAG 1 cut(s) 1817
Bst2BI CACGAG 1 cut(s) 1817
Bst2UI CCWGG 7 cut(s) 387, 797, 1091, 1332, 1365, 1386, 1529
Bst4CI ACNGT 5 cut(s) 238, 257, 291, 865, 1104
Bst6I CTCTTC 1 cut(s) 503
BstACI GRCGYC 4 cut(s) 477, 553, 618, 1141
BstAUI TGTACA 1 cut(s) 867
BstBAI YACGTR 2 cut(s) 164, 956
BstBI TTCGAA 3 cut(s) 504, 1284, 1442
BstC8I GCNNGC 9 cut(s) 460, 512, 524, 589, 622, 672, 907, 927, 1227
BstDEI CTNAG 5 cut(s) 1046, 1251, 1451, 1688, 1788
BstENI CCTNNNNNAGG 1 cut(s) 761
BstF5I GGATG 7 cut(s) 191, 492, 1099, 1569, 1645, 1667, 1756
BstFNI CGCG 5 cut(s) 322, 367, 408, 558, 1591
BstH2I RGCGCY 5 cut(s) 459, 517, 544, 556, 1144
BstHHI GCGC 8 cut(s) 367, 410, 458, 516, 543, 555, 925, 1143
BstKTI GATC 6 cut(s) 244, 262, 538, 702, 896, 1377
BstMAI GTCTC 1 cut(s) 967
BstMBI GATC 6 cut(s) 241, 259, 535, 699, 893, 1374
BstMCI CGRYCG 2 cut(s) 880, 1728
BstMWI GCNNNNNNNGC 6 cut(s) 407, 436, 926, 929, 1499, 1649
BstNI CCWGG 7 cut(s) 387, 797, 1091, 1332, 1365, 1386, 1529
BstNSI RCATGY 4 cut(s) 1229, 1402, 1409, 1486
BstPAI GACNNNNGTC 1 cut(s) 855
BstSFI CTRYAG 1 cut(s) 216
BstSLI GKGCMC 2 cut(s) 142, 1064
BstUI CGCG 5 cut(s) 322, 367, 408, 558, 1591
BstV1I GCAGC 7 cut(s) 414, 422, 907, 919, 1124, 1414, 1632
BstV2I GAAGAC 2 cut(s) 781, 849
BstX2I RGATCY 1 cut(s) 893
BstYI RGATCY 1 cut(s) 893
BsuI GTATCC 1 cut(s) 1599
BtrI CACGTC 2 cut(s) 901, 1078
BtsCI GGATG 7 cut(s) 191, 492, 1099, 1569, 1645, 1667, 1756
BveI ACCTGC 2 cut(s) 1661, 1719
Cac8I GCNNGC 9 cut(s) 460, 512, 524, 589, 622, 672, 907, 927, 1227
CfoI GCGC 8 cut(s) 367, 410, 458, 516, 543, 555, 925, 1143
Cfr10I RCCGGY 3 cut(s) 458, 587, 620
Cfr13I GGNCC 9 cut(s) 138, 139, 188, 308, 579, 1586, 1642, 1736, 1822
Cfr9I CCCGGG 1 cut(s) 889
CseI GACGC 2 cut(s) 485, 626
Csp6I GTAC 4 cut(s) 610, 868, 1033, 1801
CviAII CATG 9 cut(s) 123, 703, 847, 1226, 1399, 1406, 1476, 1483, 1573
CviQI GTAC 4 cut(s) 610, 868, 1033, 1801
DdeI CTNAG 5 cut(s) 1046, 1251, 1451, 1688, 1788
DinI GGCGCC 2 cut(s) 554, 1142
DpnI GATC 6 cut(s) 243, 261, 537, 701, 895, 1376
DpnII GATC 6 cut(s) 241, 259, 535, 699, 893, 1374
EaeI YGGCCR 1 cut(s) 460
Eam1104I CTCTTC 1 cut(s) 503
EarI CTCTTC 1 cut(s) 503
EciI GGCGGA 1 cut(s) 1480
Eco147I AGGCCT 1 cut(s) 1771
Eco24I GRGCYC 2 cut(s) 142, 1794
Eco47I GGWCC 3 cut(s) 188, 579, 1736
Eco47III AGCGCT 1 cut(s) 515
Eco57I CTGAAG 1 cut(s) 782
Eco72I CACGTG 2 cut(s) 164, 956
Eco88I CYCGRG 3 cut(s) 331, 889, 970
EcoNI CCTNNNNNAGG 1 cut(s) 761
EcoO109I RGGNCCY 2 cut(s) 139, 1736
EcoRII CCWGG 7 cut(s) 385, 795, 1089, 1330, 1363, 1384, 1527
EcoT22I ATGCAT 1 cut(s) 1756
EcoT38I GRGCYC 2 cut(s) 142, 1794
EgeI GGCGCC 2 cut(s) 554, 1142
EheI GGCGCC 2 cut(s) 554, 1142
FaeI CATG 9 cut(s) 126, 706, 850, 1229, 1402, 1409, 1479, 1486, 1576
FalI AAGNNNNNCTT 4 cut(s) 64, 96, 626, 658
FaqI GGGAC 2 cut(s) 1562, 1749
FatI CATG 9 cut(s) 122, 702, 846, 1225, 1398, 1405, 1475, 1482, 1572
FauI CCCGC 5 cut(s) 15, 406, 599, 970, 1821
FbaI TGATCA 1 cut(s) 259
FokI GGATG 7 cut(s) 178, 479, 1106, 1576, 1632, 1674, 1763
FriOI GRGCYC 2 cut(s) 142, 1794
FspBI CTAG 1 cut(s) 416
GlaI GCGC 8 cut(s) 366, 409, 457, 515, 542, 554, 924, 1142
GsaI CCCAGC 2 cut(s) 832, 1233
GsuI CTGGAG 5 cut(s) 329, 1024, 1209, 1347, 1407
HaeII RGCGCY 5 cut(s) 459, 517, 544, 556, 1144
HgaI GACGC 2 cut(s) 485, 626
HhaI GCGC 8 cut(s) 367, 410, 458, 516, 543, 555, 925, 1143
Hin1I GRCGYC 4 cut(s) 477, 553, 618, 1141
Hin1II CATG 9 cut(s) 126, 706, 850, 1229, 1402, 1409, 1479, 1486, 1576
Hin6I GCGC 8 cut(s) 365, 408, 456, 514, 541, 553, 923, 1141
HinP1I GCGC 8 cut(s) 365, 408, 456, 514, 541, 553, 923, 1141
HincII GTYRAC 2 cut(s) 50, 595
HindII GTYRAC 2 cut(s) 50, 595
HinfI GANTC 6 cut(s) 128, 560, 1286, 1690, 1763, 1784
HphI GGTGA 1 cut(s) 269
Hpy166II GTNNAC 7 cut(s) 50, 582, 595, 657, 868, 1081, 1534
Hpy188III TCNNGA 8 cut(s) 473, 658, 694, 760, 972, 1134, 1760, 1781
Hpy8I GTNNAC 7 cut(s) 50, 582, 595, 657, 868, 1081, 1534
HpyAV CCTTC 6 cut(s) 90, 95, 500, 757, 1131, 1513
HpyCH4III ACNGT 5 cut(s) 238, 257, 291, 865, 1104
HpyCH4IV ACGT 8 cut(s) 163, 630, 739, 900, 955, 1077, 1470, 1799
HpyCH4V TGCA 7 cut(s) 571, 1123, 1304, 1402, 1665, 1754, 1841
HpyF10VI GCNNNNNNNGC 6 cut(s) 407, 436, 926, 929, 1499, 1649
HpyF3I CTNAG 5 cut(s) 1046, 1251, 1451, 1688, 1788
HpySE526I ACGT 8 cut(s) 163, 630, 739, 900, 955, 1077, 1470, 1799
Hsp92I GRCGYC 4 cut(s) 477, 553, 618, 1141
Hsp92II CATG 9 cut(s) 126, 706, 850, 1229, 1402, 1409, 1479, 1486, 1576
HspAI GCGC 8 cut(s) 365, 408, 456, 514, 541, 553, 923, 1141
KasI GGCGCC 2 cut(s) 552, 1140
KflI GGGWCCC 1 cut(s) 1736
KroI GCCGGC 3 cut(s) 458, 587, 620
KroNI GCCGGC 3 cut(s) 460, 589, 622
Ksp22I TGATCA 1 cut(s) 259
Kzo9I GATC 6 cut(s) 241, 259, 535, 699, 893, 1374
LmnI GCTCC 8 cut(s) 435, 521, 531, 678, 712, 1043, 1109, 1325
Lsp1109I GCAGC 7 cut(s) 414, 422, 907, 919, 1124, 1414, 1632
LweI GCATC 5 cut(s) 501, 690, 1139, 1652, 1741
MaeI CTAG 1 cut(s) 416
MaeII ACGT 8 cut(s) 163, 630, 739, 900, 955, 1077, 1470, 1799
MaeIII GTNAC 8 cut(s) 125, 348, 951, 956, 1098, 1394, 1408, 1592
MalI GATC 6 cut(s) 243, 261, 537, 701, 895, 1376
MbiI CCGCTC 1 cut(s) 1816
MboI GATC 6 cut(s) 241, 259, 535, 699, 893, 1374
MboII GAAGA 8 cut(s) 80, 149, 373, 490, 493, 781, 854, 1369
MfeI CAATTG 1 cut(s) 1514
MflI RGATCY 1 cut(s) 893
MhlI GDGCHC 4 cut(s) 142, 338, 1064, 1794
MluCI AATT 3 cut(s) 209, 248, 1514
Mly113I GGCGCC 2 cut(s) 553, 1141
MlyI GAGTC 4 cut(s) 122, 554, 1699, 1757
MmeI TCCRAC 6 cut(s) 305, 308, 690, 840, 921, 1558
Mph1103I ATGCAT 1 cut(s) 1756
MreI CGCCGGCG 2 cut(s) 587, 620
MroNI GCCGGC 3 cut(s) 458, 587, 620
MroXI GAANNNNTTC 1 cut(s) 1085
MseI TTAA 2 cut(s) 1200, 1236
MslI CAYNNNNRTG 1 cut(s) 1026
MspA1I CMGCKG 2 cut(s) 920, 932
MunI CAATTG 1 cut(s) 1514
Mva1269I GAATGC 3 cut(s) 75, 120, 1306
MvaI CCWGG 7 cut(s) 387, 797, 1091, 1332, 1365, 1386, 1529
MvnI CGCG 5 cut(s) 322, 367, 408, 558, 1591
MwoI GCNNNNNNNGC 6 cut(s) 407, 436, 926, 929, 1499, 1649
NaeI GCCGGC 3 cut(s) 460, 589, 622
NarI GGCGCC 2 cut(s) 553, 1141
NciI CCSGG 5 cut(s) 306, 780, 890, 891, 1616
NdeII GATC 6 cut(s) 241, 259, 535, 699, 893, 1374
NgoMIV GCCGGC 3 cut(s) 458, 587, 620
NlaIII CATG 9 cut(s) 126, 706, 850, 1229, 1402, 1409, 1479, 1486, 1576
NmuCI GTSAC 4 cut(s) 125, 348, 951, 956
NsiI ATGCAT 1 cut(s) 1756
NspI RCATGY 4 cut(s) 1229, 1402, 1409, 1486
NspV TTCGAA 3 cut(s) 504, 1284, 1442
PaeI GCATGC 1 cut(s) 1229
PaeR7I CTCGAG 1 cut(s) 970
PceI AGGCCT 1 cut(s) 1771
PcsI WCGNNNNNNNCGW 3 cut(s) 471, 621, 906
PctI GAATGC 3 cut(s) 75, 120, 1306
PdiI GCCGGC 3 cut(s) 460, 589, 622
PdmI GAANNNNTTC 1 cut(s) 1085
PfeI GAWTC 2 cut(s) 1286, 1784
PflFI GACNNNGTC 1 cut(s) 629
PfoI TCCNGGA 1 cut(s) 1089
PleI GAGTC 4 cut(s) 122, 554, 1698, 1757
PluTI GGCGCC 2 cut(s) 556, 1144
PmaCI CACGTG 2 cut(s) 164, 956
PmlI CACGTG 2 cut(s) 164, 956
PpsI GAGTC 4 cut(s) 122, 554, 1698, 1757
Ppu21I YACGTR 2 cut(s) 164, 956
PpuMI RGGWCCY 1 cut(s) 1736
PshAI GACNNNNGTC 1 cut(s) 855
PshBI ATTAAT 1 cut(s) 1236
Psp5II RGGWCCY 1 cut(s) 1736
Psp6I CCWGG 7 cut(s) 385, 795, 1089, 1330, 1363, 1384, 1527
PspCI CACGTG 2 cut(s) 164, 956
PspFI CCCAGC 2 cut(s) 828, 1229
PspGI CCWGG 7 cut(s) 385, 795, 1089, 1330, 1363, 1384, 1527
PspOMI GGGCCC 1 cut(s) 138
PspPI GGNCC 9 cut(s) 138, 139, 188, 308, 579, 1586, 1642, 1736, 1822
PspPPI RGGWCCY 1 cut(s) 1736
PsuI RGATCY 1 cut(s) 893
PsyI GACNNNGTC 1 cut(s) 629
RsaI GTAC 4 cut(s) 611, 869, 1034, 1802
RsaNI GTAC 4 cut(s) 610, 868, 1033, 1801
RseI CAYNNNNRTG 1 cut(s) 1026
SaqAI TTAA 2 cut(s) 1200, 1236
Sau3AI GATC 6 cut(s) 241, 259, 535, 699, 893, 1374
Sau96I GGNCC 9 cut(s) 138, 139, 188, 308, 579, 1586, 1642, 1736, 1822
SchI GAGTC 4 cut(s) 122, 554, 1699, 1757
SduI GDGCHC 4 cut(s) 142, 338, 1064, 1794
SfaNI GCATC 5 cut(s) 501, 690, 1139, 1652, 1741
SfcI CTRYAG 1 cut(s) 216
SfoI GGCGCC 2 cut(s) 554, 1142
Sfr274I CTCGAG 1 cut(s) 970
SfuI TTCGAA 3 cut(s) 504, 1284, 1442
SgrAI CRCCGGYG 2 cut(s) 587, 620
SinI GGWCC 3 cut(s) 188, 579, 1736
SlaI CTCGAG 1 cut(s) 970
SmaI CCCGGG 1 cut(s) 891
SmiMI CAYNNNNRTG 1 cut(s) 1026
SmlI CTYRAG 2 cut(s) 970, 1765
SmoI CTYRAG 2 cut(s) 970, 1765
SpeI ACTAGT 1 cut(s) 415
SphI GCATGC 1 cut(s) 1229
Sse9I AATT 3 cut(s) 209, 248, 1514
SseBI AGGCCT 1 cut(s) 1771
SspDI GGCGCC 2 cut(s) 552, 1140
SspI AATATT 1 cut(s) 1358
SspMI CTAG 1 cut(s) 416
StuI AGGCCT 1 cut(s) 1771
TaaI ACNGT 5 cut(s) 238, 257, 291, 865, 1104
TaiI ACGT 8 cut(s) 166, 633, 742, 903, 958, 1080, 1473, 1802
TaqI TCGA 9 cut(s) 240, 355, 504, 876, 971, 988, 1005, 1284, 1442
TasI AATT 3 cut(s) 209, 248, 1514
TatI WGTACW 1 cut(s) 867
TauI GCSGC 4 cut(s) 558, 920, 932, 1591
TfiI GAWTC 2 cut(s) 1286, 1784
Tru1I TTAA 2 cut(s) 1200, 1236
Tru9I TTAA 2 cut(s) 1200, 1236
TseFI GTSAC 4 cut(s) 125, 348, 951, 956
TseI GCWGC 8 cut(s) 410, 427, 920, 932, 1112, 1402, 1620, 1841
Tsp45I GTSAC 4 cut(s) 125, 348, 951, 956
TspDTI ATGAA 1 cut(s) 1821
TspGWI ACGGA 2 cut(s) 1312, 1620
TspMI CCCGGG 1 cut(s) 889
Tth111I GACNNNGTC 1 cut(s) 629
VpaK11BI GGWCC 3 cut(s) 188, 579, 1736
VspI ATTAAT 1 cut(s) 1236
XagI CCTNNNNNAGG 1 cut(s) 761
XapI RAATTY 1 cut(s) 248
XceI RCATGY 4 cut(s) 1229, 1402, 1409, 1486
XhoI CTCGAG 1 cut(s) 970
XmaI CCCGGG 1 cut(s) 889
XmnI GAANNNNTTC 1 cut(s) 1085
XspI CTAG 1 cut(s) 416
Zsp2I ATGCAT 1 cut(s) 1756
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.