Prupe.2G278800_v2.0.a1

Endoglucanase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
27905933 .. 27908470
2538 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G278800.1

Sequence Viewer

Length: 1485 bp
ATGGCAACAGCCGGTGCAACCGCTGCTTCTTCACGTTTTGACTACGCCGATGCCTTGTCCAAGAGCATCTTGTTCTTTGAAGGGCAGAGGTCGGGAAGATTACCACCTTCCCAACGTATGACTTGGAGGAAAAGTTCTGCCCTACGTGATGGCTTTGATGTTCATAGGGATCTGGTAGGGGGATATTACGACGCAGGTGACAATGTGAAGTTCAACTTTCCTATGGCCTTCACAACAACAATGCTGTCGTGGAGCGTTATCGAGTTCGGGCAATTAATGGGGCCGGAGCTTCAACATGCTCTGGAAGCCATAAGATGGGGGACTGATTATTTGCTTAAAGCCACCAGAGTTCCTGATTCTGTTGTTGGTGCAGTTGGTGACCCAAATGCCGATCACGGTTGTTGGCAAAGGCCTGAAGACATGGACACCCCTCGCACATCTTATGTAGTCAATAAACAAAAGCCCGGTTCAGAAGTTTCGGCCGAAATTGCAGCTGCACTTGCAGCTTCTTCCATGGTGTTTAGACACTCAGACAGGGCATACGCTGCTGTACTTCTAAGAAGAGCTATGCAGGTGTTCGAATTTGCAGATAAGTACAGGGGATCTTACAATGATAGTATTGCGGCAGGAGTCTGCCCTTTCTATTGTGATTTCAACGGATACATGGATGAATTGATTTGGGGAGCTTCATGGTTATACAAGGCAACTAAGGCCCCTAATTACTGGAACTACGTCAAAAACAACATAAACTATTTGGAGTCCAATAATATTGTTGTAAGAAATGTGAATGGGAACCCTGTTCCATCATCTCAAGGTGGTAGTATCTCTGAATTTGGATGGGATGCAAAGCATGCCGGTATTAACATACTTGTTTCCCAATGGGTAATGAAAGATCCCTACAATTCTAATCCCTTCATTCCCAAAGCCGATCAATTCATATGCTCCATTTTGCCTGAATCACCTGCTCCCAAATCGGTCTCATACTCAAGAGGTGGGCTGTTGTTTAAACCTGGAGGAAGTAACTTGCAACATGCAACGTCCATATCATTTCTTCTTCTAGTTTATGGTCGCTACATGAAACTTGCCAACAAGGTTGTCGATTGTGGCAACAATGTTCATGTCACTCCAGCTAGGCTAGTGAGTTTCACCAGAGGACAGGTTGATTATATACTAGGAAGCAACCCATTGGGCATGTCGTACATGGTGGGATTTGGGCAGAAGTTTCCTCAGAACGTACATCATCGTGGTTCCGTGTTGCCTAGCGTGGCTAAGCACCCACAGCACATCGACTGCCACGTGGGATACTCCTACTTCAACGGCCACGATCCTAACCAGAACGTGCTCACTGGCGCTATCGTGGGAGGGCCTGCTGAGGATGATACCTTCAAAGACTCTCGATTTGATGCTCCCCAATCAGAGCCGACCACGTACATCAATGCGCCTTTTGTTGGTGTATTGGCTTTCTTCAAAGCTCTACATCACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

495

Amino Acids

54.48

Weight (kDa)

7.68

Isoelectric Point (pI)

42.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000663)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 3 cut(s) 185, 562, 970
Acc36I ACCTGC 3 cut(s) 185, 562, 970
AccB7I CCANNNNNTGG 1 cut(s) 315
AciI CCGC 2 cut(s) 21, 623
AclWI GGATC 4 cut(s) 177, 610, 887, 1319
AcoI YGGCCR 2 cut(s) 480, 1318
AcsI RAATTY 2 cut(s) 581, 830
AcuI CTGAAG 1 cut(s) 435
AcvI CACGTG 1 cut(s) 1297
AfaI GTAC 5 cut(s) 552, 596, 1199, 1236, 1430
AfiI CCNNNNNNNGG 2 cut(s) 315, 1448
AgsI TTSAA 7 cut(s) 80, 214, 293, 655, 1315, 1387, 1468
AjnI CCWGG 1 cut(s) 1009
AloI GAACNNNNNNTCC 2 cut(s) 118, 150
AluBI AGCT 7 cut(s) 289, 494, 506, 566, 686, 1130, 1472
AluI AGCT 7 cut(s) 289, 494, 506, 566, 686, 1130, 1472
Alw21I GWGCWC 1 cut(s) 1344
Alw26I GTCTC 1 cut(s) 982
AlwI GGATC 4 cut(s) 177, 610, 887, 1319
AoxI GGCC 7 cut(s) 225, 281, 410, 480, 711, 1318, 1364
ApeKI GCWGC 5 cut(s) 23, 491, 494, 503, 545
ApoI RAATTY 2 cut(s) 581, 830
ArsI GACNNNNNNTTYG 4 cut(s) 313, 345, 1382, 1414
AseI ATTAAT 1 cut(s) 275
AspLEI GCGC 2 cut(s) 1352, 1441
AspS9I GGNCC 3 cut(s) 281, 712, 1364
AsuC2I CCSGG 1 cut(s) 465
AsuHPI GGTGA 4 cut(s) 209, 389, 951, 1138
AsuII TTCGAA 1 cut(s) 579
BbrPI CACGTG 1 cut(s) 1297
BbsI GAAGAC 1 cut(s) 423
Bbv12I GWGCWC 1 cut(s) 1344
BbvCI CCTCAGC 1 cut(s) 1371
BbvI GCAGC 5 cut(s) 10, 481, 503, 515, 532
BccI CCATC 4 cut(s) 143, 309, 811, 831
BceAI ACGGC 1 cut(s) 1333
BciT130I CCWGG 1 cut(s) 1011
BciVI GTATCC 2 cut(s) 653, 1295
BcnI CCSGG 1 cut(s) 465
BcoDI GTCTC 1 cut(s) 982
BfaI CTAG 5 cut(s) 1058, 1131, 1136, 1172, 1260
BfoI RGCGCY 1 cut(s) 1353
BfuAI ACCTGC 3 cut(s) 185, 562, 970
BfuI GTATCC 2 cut(s) 653, 1295
BisI GCNGC 6 cut(s) 24, 492, 495, 504, 546, 624
BlpI GCTNAGC 1 cut(s) 1269
BlsI GCNGC 6 cut(s) 25, 493, 496, 505, 547, 625
Bme1390I CCNGG 2 cut(s) 465, 1011
BmgT120I GGNCC 3 cut(s) 281, 712, 1364
BmiI GGNNCC 4 cut(s) 282, 714, 794, 1249
BmrFI CCNGG 2 cut(s) 465, 1011
BmsI GCATC 4 cut(s) 40, 75, 832, 1393
BpiI GAAGAC 1 cut(s) 423
BpmI CTGGAG 2 cut(s) 1032, 1110
Bpu10I CCTNAGC 1 cut(s) 1371
Bpu1102I GCTNAGC 1 cut(s) 1269
Bpu14I TTCGAA 1 cut(s) 579
BpuEI CTTGAG 2 cut(s) 795, 970
BpuMI CCSGG 1 cut(s) 465
BsaAI YACGTR 3 cut(s) 146, 1297, 1428
BsaI GGTCTC 1 cut(s) 982
BsaJI CCNNGG 1 cut(s) 513
BsaXI ACNNNNNCTCC 2 cut(s) 118, 148
Bsc4I CCNNNNNNNGG 2 cut(s) 315, 1448
Bse118I RCCGGY 2 cut(s) 11, 854
Bse1I ACTGG 2 cut(s) 728, 1351
BseBI CCWGG 1 cut(s) 1011
BseDI CCNNGG 1 cut(s) 513
BseGI GGATG 4 cut(s) 673, 842, 847, 1381
BseLI CCNNNNNNNGG 2 cut(s) 315, 1448
BseMII CTCAG 3 cut(s) 543, 1241, 1362
BseNI ACTGG 2 cut(s) 728, 1351
BseX3I CGGCCG 1 cut(s) 480
BseXI GCAGC 5 cut(s) 10, 481, 503, 515, 532
BsgI GTGCAG 2 cut(s) 390, 480
Bsh1285I CGRYCG 1 cut(s) 483
BshFI GGCC 7 cut(s) 227, 283, 412, 482, 713, 1320, 1366
BsiEI CGRYCG 1 cut(s) 483
BsiHKAI GWGCWC 1 cut(s) 1344
BsiSI CCGG 4 cut(s) 12, 284, 465, 855
BslFI GGGAC 1 cut(s) 334
BslI CCNNNNNNNGG 2 cut(s) 315, 1448
BsmAI GTCTC 1 cut(s) 982
BsmFI GGGAC 1 cut(s) 334
BsnI GGCC 7 cut(s) 227, 283, 412, 482, 713, 1320, 1366
Bso31I GGTCTC 1 cut(s) 982
Bsp119I TTCGAA 1 cut(s) 579
Bsp1286I GDGCHC 1 cut(s) 1344
Bsp143I GATC 6 cut(s) 169, 391, 602, 892, 928, 1324
Bsp1720I GCTNAGC 1 cut(s) 1269
Bsp19I CCATGG 1 cut(s) 513
BspACI CCGC 2 cut(s) 21, 623
BspANI GGCC 7 cut(s) 227, 283, 412, 482, 713, 1320, 1366
BspCNI CTCAG 3 cut(s) 542, 1240, 1363
BspLI GGNNCC 4 cut(s) 282, 714, 794, 1249
BspMI ACCTGC 3 cut(s) 185, 562, 970
BspPI GGATC 4 cut(s) 177, 610, 887, 1319
BspQI GCTCTTC 1 cut(s) 556
BspT104I TTCGAA 1 cut(s) 579
BspTNI GGTCTC 1 cut(s) 982
BsrFI RCCGGY 2 cut(s) 11, 854
BsrI ACTGG 2 cut(s) 728, 1351
BssAI RCCGGY 2 cut(s) 11, 854
BssECI CCNNGG 1 cut(s) 513
BssMI GATC 6 cut(s) 169, 391, 602, 892, 928, 1324
BssT1I CCWWGG 1 cut(s) 513
Bst2UI CCWGG 1 cut(s) 1011
Bst4CI ACNGT 1 cut(s) 398
Bst6I CTCTTC 1 cut(s) 556
BstAPI GCANNNNNTGC 3 cut(s) 23, 545, 851
BstBAI YACGTR 3 cut(s) 146, 1297, 1428
BstBI TTCGAA 1 cut(s) 579
BstC8I GCNNGC 2 cut(s) 852, 1368
BstDEI CTNAG 6 cut(s) 529, 557, 708, 1227, 1269, 1371
BstDSI CCRYGG 1 cut(s) 513
BstEII GGTNACC 1 cut(s) 377
BstF5I GGATG 4 cut(s) 673, 842, 847, 1381
BstH2I RGCGCY 1 cut(s) 1353
BstHHI GCGC 2 cut(s) 1352, 1441
BstKTI GATC 6 cut(s) 172, 394, 605, 895, 931, 1327
BstMAI GTCTC 1 cut(s) 982
BstMBI GATC 6 cut(s) 169, 391, 602, 892, 928, 1324
BstMCI CGRYCG 1 cut(s) 483
BstMWI GCNNNNNNNGC 9 cut(s) 23, 305, 488, 500, 503, 545, 710, 851, 1279
BstNI CCWGG 1 cut(s) 1011
BstNSI RCATGY 4 cut(s) 299, 854, 1034, 1195
BstPI GGTNACC 1 cut(s) 377
BstSCI CCNGG 2 cut(s) 463, 1009
BstV1I GCAGC 5 cut(s) 10, 481, 503, 515, 532
BstV2I GAAGAC 1 cut(s) 423
BstX2I RGATCY 3 cut(s) 169, 602, 892
BstYI RGATCY 3 cut(s) 169, 602, 892
BstZI CGGCCG 1 cut(s) 480
BsuI GTATCC 2 cut(s) 653, 1295
BsuRI GGCC 7 cut(s) 227, 283, 412, 482, 713, 1320, 1366
BtgI CCRYGG 1 cut(s) 513
BtsCI GGATG 4 cut(s) 673, 842, 847, 1381
BtsIMutI CAGTG 1 cut(s) 1344
BveI ACCTGC 3 cut(s) 185, 562, 970
Cac8I GCNNGC 2 cut(s) 852, 1368
CfoI GCGC 2 cut(s) 1352, 1441
Cfr10I RCCGGY 2 cut(s) 11, 854
Cfr13I GGNCC 3 cut(s) 281, 712, 1364
CseI GACGC 1 cut(s) 200
Csp6I GTAC 5 cut(s) 551, 595, 1198, 1235, 1429
CviQI GTAC 5 cut(s) 551, 595, 1198, 1235, 1429
DdeI CTNAG 6 cut(s) 529, 557, 708, 1227, 1269, 1371
DpnI GATC 6 cut(s) 171, 393, 604, 894, 930, 1326
DpnII GATC 6 cut(s) 169, 391, 602, 892, 928, 1324
DraI TTTAAA 1 cut(s) 1006
EaeI YGGCCR 2 cut(s) 480, 1318
EagI CGGCCG 1 cut(s) 480
Eam1104I CTCTTC 1 cut(s) 556
EarI CTCTTC 1 cut(s) 556
EclXI CGGCCG 1 cut(s) 480
Eco130I CCWWGG 1 cut(s) 513
Eco147I AGGCCT 1 cut(s) 412
Eco31I GGTCTC 1 cut(s) 982
Eco52I CGGCCG 1 cut(s) 480
Eco57I CTGAAG 1 cut(s) 435
Eco72I CACGTG 1 cut(s) 1297
Eco91I GGTNACC 1 cut(s) 377
EcoO109I RGGNCCY 2 cut(s) 712, 1364
EcoO65I GGTNACC 1 cut(s) 377
EcoRII CCWGG 1 cut(s) 1009
EcoT14I CCWWGG 1 cut(s) 513
ErhI CCWWGG 1 cut(s) 513
FalI AAGNNNNNCTT 4 cut(s) 53, 85, 200, 232
FaqI GGGAC 1 cut(s) 334
FauNDI CATATG 1 cut(s) 938
Fnu4HI GCNGC 6 cut(s) 24, 492, 495, 504, 546, 624
FokI GGATG 4 cut(s) 680, 849, 854, 1388
Fsp4HI GCNGC 6 cut(s) 24, 492, 495, 504, 546, 624
FspBI CTAG 5 cut(s) 1058, 1131, 1136, 1172, 1260
GlaI GCGC 2 cut(s) 1351, 1440
GluI GCNGC 6 cut(s) 24, 492, 495, 504, 546, 624
GsuI CTGGAG 2 cut(s) 1032, 1110
HaeII RGCGCY 1 cut(s) 1353
HaeIII GGCC 7 cut(s) 227, 283, 412, 482, 713, 1320, 1366
HapII CCGG 4 cut(s) 12, 284, 465, 855
HgaI GACGC 1 cut(s) 200
HhaI GCGC 2 cut(s) 1352, 1441
Hin6I GCGC 2 cut(s) 1350, 1439
HinP1I GCGC 2 cut(s) 1350, 1439
HinfI GANTC 5 cut(s) 356, 630, 758, 956, 1391
HpaII CCGG 4 cut(s) 12, 284, 465, 855
HphI GGTGA 4 cut(s) 209, 389, 951, 1138
Hpy188I TCNGA 5 cut(s) 472, 532, 829, 1230, 1417
Hpy188III TCNNGA 5 cut(s) 93, 302, 353, 987, 1395
Hpy99I CGWCG 1 cut(s) 194
HpyAV CCTTC 5 cut(s) 74, 117, 238, 922, 1393
HpyCH4III ACNGT 1 cut(s) 398
HpyCH4IV ACGT 9 cut(s) 34, 115, 145, 732, 1037, 1233, 1296, 1338, 1427
HpyF10VI GCNNNNNNNGC 9 cut(s) 23, 305, 488, 500, 503, 545, 710, 851, 1279
HpyF3I CTNAG 6 cut(s) 529, 557, 708, 1227, 1269, 1371
HpySE526I ACGT 9 cut(s) 34, 115, 145, 732, 1037, 1233, 1296, 1338, 1427
HspAI GCGC 2 cut(s) 1350, 1439
Kzo9I GATC 6 cut(s) 169, 391, 602, 892, 928, 1324
LguI GCTCTTC 1 cut(s) 556
LmnI GCTCC 6 cut(s) 252, 286, 683, 947, 970, 1411
Lsp1109I GCAGC 5 cut(s) 10, 481, 503, 515, 532
LweI GCATC 4 cut(s) 40, 75, 832, 1393
MaeI CTAG 5 cut(s) 1058, 1131, 1136, 1172, 1260
MaeII ACGT 9 cut(s) 34, 115, 145, 732, 1037, 1233, 1296, 1338, 1427
MaeIII GTNAC 4 cut(s) 197, 377, 1019, 1120
MalI GATC 6 cut(s) 171, 393, 604, 894, 930, 1326
MboI GATC 6 cut(s) 169, 391, 602, 892, 928, 1324
MboII GAAGA 8 cut(s) 21, 108, 428, 501, 573, 1043, 1046, 1456
MflI RGATCY 3 cut(s) 169, 602, 892
MhlI GDGCHC 1 cut(s) 1344
MluCI AATT 8 cut(s) 272, 486, 581, 671, 718, 830, 901, 932
MlyI GAGTC 3 cut(s) 639, 767, 1385
MnlI CCTC 9 cut(s) 81, 120, 441, 983, 1007, 1145, 1236, 1355, 1366
MseI TTAA 4 cut(s) 275, 336, 861, 1005
MslI CAYNNNNRTG 1 cut(s) 1242
MspA1I CMGCKG 2 cut(s) 23, 494
MspI CCGG 4 cut(s) 12, 284, 465, 855
MspR9I CCNGG 2 cut(s) 465, 1011
MssI GTTTAAAC 1 cut(s) 1006
MvaI CCWGG 1 cut(s) 1011
MwoI GCNNNNNNNGC 9 cut(s) 23, 305, 488, 500, 503, 545, 710, 851, 1279
NciI CCSGG 1 cut(s) 465
NcoI CCATGG 1 cut(s) 513
NdeI CATATG 1 cut(s) 938
NdeII GATC 6 cut(s) 169, 391, 602, 892, 928, 1324
NlaIV GGNNCC 4 cut(s) 282, 714, 794, 1249
NmuCI GTSAC 3 cut(s) 197, 377, 1120
NspI RCATGY 4 cut(s) 299, 854, 1034, 1195
NspV TTCGAA 1 cut(s) 579
PaeI GCATGC 1 cut(s) 854
PaqCI CACCTGC 3 cut(s) 185, 562, 970
PceI AGGCCT 1 cut(s) 412
PciSI GCTCTTC 1 cut(s) 556
PcsI WCGNNNNNNNCGW 1 cut(s) 1293
PfeI GAWTC 2 cut(s) 356, 956
PflMI CCANNNNNTGG 1 cut(s) 315
PkrI GCNGC 6 cut(s) 25, 493, 496, 505, 547, 625
PleI GAGTC 3 cut(s) 638, 766, 1385
PmaCI CACGTG 1 cut(s) 1297
PmeI GTTTAAAC 1 cut(s) 1006
PmlI CACGTG 1 cut(s) 1297
PpsI GAGTC 3 cut(s) 638, 766, 1385
Ppu21I YACGTR 3 cut(s) 146, 1297, 1428
PshBI ATTAAT 1 cut(s) 275
Psp6I CCWGG 1 cut(s) 1009
PspCI CACGTG 1 cut(s) 1297
PspEI GGTNACC 1 cut(s) 377
PspGI CCWGG 1 cut(s) 1009
PspN4I GGNNCC 4 cut(s) 282, 714, 794, 1249
PspPI GGNCC 3 cut(s) 281, 712, 1364
PsuI RGATCY 3 cut(s) 169, 602, 892
PvuII CAGCTG 1 cut(s) 494
RsaI GTAC 5 cut(s) 552, 596, 1199, 1236, 1430
RsaNI GTAC 5 cut(s) 551, 595, 1198, 1235, 1429
RseI CAYNNNNRTG 1 cut(s) 1242
SapI GCTCTTC 1 cut(s) 556
SaqAI TTAA 4 cut(s) 275, 336, 861, 1005
SatI GCNGC 6 cut(s) 24, 492, 495, 504, 546, 624
Sau3AI GATC 6 cut(s) 169, 391, 602, 892, 928, 1324
Sau96I GGNCC 3 cut(s) 281, 712, 1364
SchI GAGTC 3 cut(s) 639, 767, 1385
ScrFI CCNGG 2 cut(s) 465, 1011
SduI GDGCHC 1 cut(s) 1344
SfaNI GCATC 4 cut(s) 40, 75, 832, 1393
SfuI TTCGAA 1 cut(s) 579
SmiMI CAYNNNNRTG 1 cut(s) 1242
SmlI CTYRAG 2 cut(s) 810, 985
SmoI CTYRAG 2 cut(s) 810, 985
SphI GCATGC 1 cut(s) 854
Sse9I AATT 8 cut(s) 272, 486, 581, 671, 718, 830, 901, 932
SseBI AGGCCT 1 cut(s) 412
SsiI CCGC 2 cut(s) 21, 623
SspI AATATT 1 cut(s) 769
SspMI CTAG 5 cut(s) 1058, 1131, 1136, 1172, 1260
StuI AGGCCT 1 cut(s) 412
StyD4I CCNGG 2 cut(s) 463, 1009
StyI CCWWGG 1 cut(s) 513
TaaI ACNGT 1 cut(s) 398
TaiI ACGT 9 cut(s) 37, 118, 148, 735, 1040, 1236, 1299, 1341, 1430
TaqI TCGA 5 cut(s) 261, 579, 1098, 1287, 1396
TaqII GACCGA 1 cut(s) 964
TasI AATT 8 cut(s) 272, 486, 581, 671, 718, 830, 901, 932
TatI WGTACW 2 cut(s) 550, 594
TauI GCSGC 1 cut(s) 626
TfiI GAWTC 2 cut(s) 356, 956
Tru1I TTAA 4 cut(s) 275, 336, 861, 1005
Tru9I TTAA 4 cut(s) 275, 336, 861, 1005
TscAI CASTG 1 cut(s) 1351
TseFI GTSAC 3 cut(s) 197, 377, 1120
TseI GCWGC 5 cut(s) 23, 491, 494, 503, 545
Tsp45I GTSAC 3 cut(s) 197, 377, 1120
TspDTI ATGAA 8 cut(s) 152, 678, 684, 902, 904, 925, 1091, 1106
TspGWI ACGGA 2 cut(s) 672, 1240
TspRI CASTG 1 cut(s) 1351
Van91I CCANNNNNTGG 1 cut(s) 315
VspI ATTAAT 1 cut(s) 275
XapI RAATTY 2 cut(s) 581, 830
XceI RCATGY 4 cut(s) 299, 854, 1034, 1195
XspI CTAG 5 cut(s) 1058, 1131, 1136, 1172, 1260
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.