RchiOBHm_Chr4g0443471

Endoglucanase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000663
Physical Location & Seq
Reverse (-)
64581618 .. 64585662
4045 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ41117

Sequence Viewer

Length: 1518 bp
ATGGCGCGAAATGGCCTTTGCTTCCCGGGAAATGTTCCCGCATTTCGCGCAGCACTAGTCCTCTCGCTGCTCCTCCTGCTTCTCCACCCAACCAGCGCCGGCCACGACTATCACGACGCCCTCCGCAAGAGCATCCTCTTCTTCGAAGGCCAGCGCTCCGGCAAGCTCCCACCCGATCAGCGCCTCAAATGGCGCCACGACTCCGCATTGCACGACGGCTCCACCGCCGGCGTAGACTTATCCGGCGGGTACTACGACGCCGGCGACAACGTCAAGTTCGGCTTTCCAATGGCGTTCACGACGACTTTGCTGGCGTGGAGCATCATAGACTTCGGGAGGATCATGGGGTCGGAGCAGAGGAACGCCGTCAAGTCCTTACGTTGGGGAACCGACTACCTCCTGAAGGCGACAGCGGTTCCCGGCGTTGTCTTCGTCCAGGTCGGCGACCCCTACTCCGACCACAACTGCTGGGAGAGGCCGGAAGACATGGACACTCGTCGCACGGTGTACAAAATCGACCGGAACAACCCGGGATCCGACGTGGCAGGCGAAACCGCCGCTGCGCTCGCCGCTGCCTCCATCGTGTTCAGGTCACGTGACCCCGCTTACTCGAGACTGCTTCTCAATCGAGCCGTTAGGGTTTTCGAGTTCGCTGACACCCATCGTGGTGCGTACAGCTCCAGCCTCAGAAACGCCGTGTGCCCTTTTTACTGCGACGTGAACGGCTTCCAGGATGAGTTACTGTGGGGAGCAGCGTGGTTGCACAAGGCATCAAGAAGGCGCCATTACAGAGAATACATAGTGAGAAACGAGGTGGTGTTGAGAGCTGGAGATACCATTAACGAGTTTGGTTGGGATAACAAGCATGCTGGGATTAATGTCCTCATTTCTAAGGAAGTGCTTATGGGAAAAGCAGATTATTTCGAATCTTTCAAGCAGAATGCAGATGGATTTATATGCTCCGTTTTGCCTGGACTTACCCATACCCAAGTCCAATATTCTCCAGGTGGTTTGATCTTCAAGCCTGGAGGGAGTAACATGCAGCATGTAACTTCGCTTTCGTTCCTACTTTTGACTTATTCGAACTATCTAAGCCATGCCAATAAGAACGTGCCATGTGGCATGTCCTCCGCCTCCGCTGCCTTCCTCAAACAATTGGCTAAACGCCAGGTGGACTACATTTTGGGTGACAATCCATTGAGGATGTCTTACATGGTTGGATATGGGCCGCGTTACCCACAAAGGATACACCACCGGGGCAGCTCACTTCCGTCTGTTCAGGCCCATCCTGCTCGCATCGGATGCAAAGCCGGTTCTCGCTATTTTCTGAGTCCAAATCCGAACCCGAACCTGCTGGTTGGGGCGGTCGTGGGGGACCCAATAGCTCGGATGCATTTCCAGACTCAAGGCCTTACTTTCAAGAATCTGAGCCCACGACGTACATCAATGCGCCGCTTGTGGGCCTACTTTCATATTTTGCAGCCCACTATTGATTCAACAAGTGTAAACAGTGAATGA

Protein Analysis

505

Amino Acids

56.24

Weight (kDa)

9.46

Isoelectric Point (pI)

42.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_9 PF00759 37 - 464 8.6e-144 Glycosyl hydrolase family 9
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000663)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G23210 AT1G70710
fragaria_vesca FvH4_4g33940 FvH4_6g41450 FvH4_7g27772 FvH4_7g27773 FvH4_7g27774 FvH4_7g27775
malus_domestica MD00G1036700.v1.1 MD07G1097500.v1.1 MD11G1195000.v1.1 MD16G1021500.v1.1
prunus_persica Prupe.1G331000_v2.0.a1 Prupe.1G331000_v2.0.a1 Prupe.2G121700_v2.0.a1 Prupe.2G278700_v2.0.a1 Prupe.2G278800_v2.0.a1
pyrus_communis pycom01g19480 pycom03g11560 pycom06g08760 pycom16g01920
rosa_chinensis RchiOBHm_Chr1g0374571 RchiOBHm_Chr1g0374581 RchiOBHm_Chr1g0374591 RchiOBHm_Chr1g0374601 RchiOBHm_Chr1g0374611 RchiOBHm_Chr2g0157011 RchiOBHm_Chr4g0443471
rosa_laevigata RLG00000005926 RLG00000026724 RLG00000026725 RLG00000026726 RLG00000026727
rosa_multiflora Rmu_co8114132.1_g000001 Rmu_sc0004947.1_g000005 Rmu_sc0004947.1_g000006 Rmu_sc0004947.1_g000007 Rmu_sc0004947.1_g000008 Rmu_sc0009670.1_g000003 Rmu_sc0034696.1_g000001 Rmu_sc0037664.1_g000001 Rmu_ssc0000408.1_g000014
rosa_roxburghii Rroxscaffold_4G00283360 Rroxscaffold_4G00283370 Rroxscaffold_4G00283380 Rroxscaffold_5G00384020
rosa_rugosa Rorug01G0059600 Rorug01G0384100 Rorug01G0384200 Rorug01G0384200 Rorug02G0457500 Rorug04G0346500 Rorug04G0346500 Rorug07G0215300
rosa_samantha Rh1AG395000 Rh1AG395100 Rh1AG395200 Rh1AG395400 Rh1CG372800 Rh1CG372900 Rh1CG373000 Rh1CG373100 Rh1DG390300 Rh1DG390400 Rh1DG390500 Rh1DG390600 Rh2BG536600 Rh2DG545500 Rh4AG402000 Rh4CG429100 Rh4DG409100
rosa_wichuraiana Rw1G035030 Rw1G035040 Rw1G035050 Rw1G035060 Rw4G034660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1359
AccB1I GGYRCC 2 cut(s) 192, 780
AccI GTMKAC 1 cut(s) 234
AccII CGCG 3 cut(s) 7, 48, 1231
AclWI GGATC 3 cut(s) 347, 528, 541
AcoI YGGCCR 1 cut(s) 100
AcuI CTGAAG 1 cut(s) 422
AcvI CACGTG 1 cut(s) 596
AcyI GRCGYC 4 cut(s) 117, 193, 258, 781
AfaI GTAC 4 cut(s) 251, 509, 674, 1441
AfeI AGCGCT 1 cut(s) 155
AfiI CCNNNNNNNGG 3 cut(s) 381, 403, 1459
AgsI TTSAA 4 cut(s) 934, 1021, 1420, 1497
AhlI ACTAGT 1 cut(s) 55
AjiI CACGTC 2 cut(s) 541, 718
AjnI CCWGG 6 cut(s) 435, 729, 970, 1003, 1024, 1167
AluBI AGCT 5 cut(s) 166, 678, 827, 1263, 1385
AluI AGCT 5 cut(s) 166, 678, 827, 1263, 1385
Alw26I GTCTC 1 cut(s) 607
AlwI GGATC 3 cut(s) 347, 528, 541
Ama87I CYCGRG 3 cut(s) 25, 529, 610
Aor51HI AGCGCT 1 cut(s) 155
AoxI GGCC 8 cut(s) 13, 100, 148, 476, 1226, 1281, 1408, 1461
ApeKI GCWGC 9 cut(s) 50, 67, 560, 572, 752, 1042, 1139, 1260, 1480
AseI ATTAAT 1 cut(s) 876
Asp700I GAANNNNTTC 1 cut(s) 725
AspLEI GCGC 9 cut(s) 7, 50, 98, 156, 183, 195, 565, 783, 1452
AspS9I GGNCC 4 cut(s) 1226, 1282, 1375, 1461
AsuC2I CCSGG 6 cut(s) 26, 27, 420, 530, 531, 1256
AsuHPI GGTGA 1 cut(s) 1199
AsuII TTCGAA 3 cut(s) 144, 924, 1082
AvaI CYCGRG 3 cut(s) 25, 529, 610
AvaII GGWCC 1 cut(s) 1375
BaeGI GKGCMC 1 cut(s) 704
BamHI GGATCC 1 cut(s) 533
BanI GGYRCC 2 cut(s) 192, 780
BanII GRGCYC 1 cut(s) 1433
BbrPI CACGTG 1 cut(s) 596
BbsI GAAGAC 2 cut(s) 421, 489
BbvI GCAGC 9 cut(s) 54, 62, 547, 559, 764, 1054, 1126, 1272, 1492
BccI CCATC 4 cut(s) 587, 669, 941, 1293
BceAI ACGGC 5 cut(s) 232, 350, 617, 680, 739
BcgI CGANNNNNNTGC 2 cut(s) 289, 323
BciT130I CCWGG 6 cut(s) 437, 731, 972, 1005, 1026, 1169
BciVI GTATCC 1 cut(s) 1239
BcnI CCSGG 6 cut(s) 26, 27, 420, 530, 531, 1256
BcoDI GTCTC 1 cut(s) 607
BcuI ACTAGT 1 cut(s) 55
BfaI CTAG 1 cut(s) 56
BfoI RGCGCY 5 cut(s) 99, 157, 184, 196, 784
BfuAI ACCTGC 1 cut(s) 1359
BfuI GTATCC 1 cut(s) 1239
Bme18I GGWCC 1 cut(s) 1375
BmeT110I CYCGRG 3 cut(s) 25, 529, 610
BmgBI CACGTC 2 cut(s) 541, 718
BmgT120I GGNCC 4 cut(s) 1226, 1282, 1375, 1461
BmiI GGNNCC 8 cut(s) 194, 220, 388, 417, 535, 782, 1376, 1377
BmsI GCATC 6 cut(s) 141, 330, 779, 1292, 1305, 1380
BoxI GACNNNNGTC 1 cut(s) 495
BpiI GAAGAC 2 cut(s) 421, 489
BpmI CTGGAG 4 cut(s) 664, 849, 987, 1047
Bpu14I TTCGAA 3 cut(s) 144, 924, 1082
BpuEI CTTGAG 1 cut(s) 1389
BpuMI CCSGG 6 cut(s) 26, 27, 420, 530, 531, 1256
BsaAI YACGTR 1 cut(s) 596
BsaHI GRCGYC 4 cut(s) 117, 193, 258, 781
BsaJI CCNNGG 3 cut(s) 25, 529, 1255
BsaWI WCCGGW 1 cut(s) 519
BsaXI ACNNNNNCTCC 4 cut(s) 203, 233, 437, 467
Bsc4I CCNNNNNNNGG 3 cut(s) 381, 403, 1459
Bse118I RCCGGY 4 cut(s) 98, 227, 260, 1310
Bse3DI GCAATG 1 cut(s) 206
BseBI CCWGG 6 cut(s) 437, 731, 972, 1005, 1026, 1169
BseDI CCNNGG 3 cut(s) 25, 529, 1255
BseGI GGATG 6 cut(s) 132, 739, 1209, 1285, 1307, 1395
BseLI CCNNNNNNNGG 3 cut(s) 381, 403, 1459
BseMI GCAATG 1 cut(s) 206
BseMII CTCAG 3 cut(s) 700, 1319, 1418
BseRI GAGGAG 1 cut(s) 62
BseSI GKGCMC 1 cut(s) 704
BseXI GCAGC 9 cut(s) 54, 62, 547, 559, 764, 1054, 1126, 1272, 1492
BseYI CCCAGC 2 cut(s) 468, 869
Bsh1236I CGCG 3 cut(s) 7, 48, 1231
Bsh1285I CGRYCG 2 cut(s) 520, 1368
BshFI GGCC 8 cut(s) 15, 102, 150, 478, 1228, 1283, 1410, 1463
BshNI GGYRCC 2 cut(s) 192, 780
BsiEI CGRYCG 2 cut(s) 520, 1368
BsiHKCI CYCGRG 3 cut(s) 25, 529, 610
BslFI GGGAC 1 cut(s) 1388
BslI CCNNNNNNNGG 3 cut(s) 381, 403, 1459
BsmAI GTCTC 1 cut(s) 607
BsmFI GGGAC 1 cut(s) 1388
BsmI GAATGC 1 cut(s) 946
BsnI GGCC 8 cut(s) 15, 102, 150, 478, 1228, 1283, 1410, 1463
BsoBI CYCGRG 3 cut(s) 25, 529, 610
Bsp119I TTCGAA 3 cut(s) 144, 924, 1082
Bsp1286I GDGCHC 2 cut(s) 704, 1433
Bsp1407I TGTACA 1 cut(s) 507
Bsp143I GATC 4 cut(s) 175, 339, 533, 1014
BspANI GGCC 8 cut(s) 15, 102, 150, 478, 1228, 1283, 1410, 1463
BspCNI CTCAG 3 cut(s) 699, 1320, 1419
BspFNI CGCG 3 cut(s) 7, 48, 1231
BspLI GGNNCC 8 cut(s) 194, 220, 388, 417, 535, 782, 1376, 1377
BspMI ACCTGC 1 cut(s) 1359
BspPI GGATC 3 cut(s) 347, 528, 541
BspT104I TTCGAA 3 cut(s) 144, 924, 1082
BspT107I GGYRCC 2 cut(s) 192, 780
BsrDI GCAATG 1 cut(s) 206
BsrFI RCCGGY 4 cut(s) 98, 227, 260, 1310
BsrGI TGTACA 1 cut(s) 507
BssAI RCCGGY 4 cut(s) 98, 227, 260, 1310
BssECI CCNNGG 3 cut(s) 25, 529, 1255
BssMI GATC 4 cut(s) 175, 339, 533, 1014
BssNI GRCGYC 4 cut(s) 117, 193, 258, 781
Bst2UI CCWGG 6 cut(s) 437, 731, 972, 1005, 1026, 1169
Bst4CI ACNGT 3 cut(s) 505, 744, 1511
Bst6I CTCTTC 1 cut(s) 143
BstACI GRCGYC 4 cut(s) 117, 193, 258, 781
BstAPI GCANNNNNTGC 1 cut(s) 1302
BstAUI TGTACA 1 cut(s) 507
BstBAI YACGTR 1 cut(s) 596
BstBI TTCGAA 3 cut(s) 144, 924, 1082
BstDEI CTNAG 5 cut(s) 686, 891, 1091, 1328, 1427
BstENI CCTNNNNNAGG 1 cut(s) 401
BstF5I GGATG 6 cut(s) 132, 739, 1209, 1285, 1307, 1395
BstFNI CGCG 3 cut(s) 7, 48, 1231
BstH2I RGCGCY 5 cut(s) 99, 157, 184, 196, 784
BstHHI GCGC 9 cut(s) 7, 50, 98, 156, 183, 195, 565, 783, 1452
BstKTI GATC 4 cut(s) 178, 342, 536, 1017
BstMAI GTCTC 1 cut(s) 607
BstMBI GATC 4 cut(s) 175, 339, 533, 1014
BstMCI CGRYCG 2 cut(s) 520, 1368
BstMWI GCNNNNNNNGC 7 cut(s) 47, 76, 566, 569, 1139, 1289, 1302
BstNI CCWGG 6 cut(s) 437, 731, 972, 1005, 1026, 1169
BstNSI RCATGY 4 cut(s) 869, 1042, 1049, 1126
BstPAI GACNNNNGTC 1 cut(s) 495
BstSLI GKGCMC 1 cut(s) 704
BstUI CGCG 3 cut(s) 7, 48, 1231
BstV1I GCAGC 9 cut(s) 54, 62, 547, 559, 764, 1054, 1126, 1272, 1492
BstV2I GAAGAC 2 cut(s) 421, 489
BstX2I RGATCY 1 cut(s) 533
BstYI RGATCY 1 cut(s) 533
BsuI GTATCC 1 cut(s) 1239
BsuRI GGCC 8 cut(s) 15, 102, 150, 478, 1228, 1283, 1410, 1463
BtrI CACGTC 2 cut(s) 541, 718
BtsCI GGATG 6 cut(s) 132, 739, 1209, 1285, 1307, 1395
BtsIMutI CAGTG 1 cut(s) 1516
BveI ACCTGC 1 cut(s) 1359
CfoI GCGC 9 cut(s) 7, 50, 98, 156, 183, 195, 565, 783, 1452
Cfr10I RCCGGY 4 cut(s) 98, 227, 260, 1310
Cfr13I GGNCC 4 cut(s) 1226, 1282, 1375, 1461
Cfr9I CCCGGG 2 cut(s) 25, 529
CseI GACGC 2 cut(s) 125, 266
Csp6I GTAC 4 cut(s) 250, 508, 673, 1440
CviAII CATG 9 cut(s) 343, 487, 866, 1039, 1046, 1097, 1116, 1123, 1213
CviQI GTAC 4 cut(s) 250, 508, 673, 1440
DdeI CTNAG 5 cut(s) 686, 891, 1091, 1328, 1427
DinI GGCGCC 2 cut(s) 194, 782
DpnI GATC 4 cut(s) 177, 341, 535, 1016
DpnII GATC 4 cut(s) 175, 339, 533, 1014
EaeI YGGCCR 1 cut(s) 100
Eam1104I CTCTTC 1 cut(s) 143
EarI CTCTTC 1 cut(s) 143
EciI GGCGGA 1 cut(s) 1120
Eco147I AGGCCT 1 cut(s) 1410
Eco24I GRGCYC 1 cut(s) 1433
Eco47I GGWCC 1 cut(s) 1375
Eco47III AGCGCT 1 cut(s) 155
Eco57I CTGAAG 1 cut(s) 422
Eco72I CACGTG 1 cut(s) 596
Eco88I CYCGRG 3 cut(s) 25, 529, 610
EcoNI CCTNNNNNAGG 1 cut(s) 401
EcoO109I RGGNCCY 1 cut(s) 1375
EcoRII CCWGG 6 cut(s) 435, 729, 970, 1003, 1024, 1167
EcoT22I ATGCAT 1 cut(s) 1395
EcoT38I GRGCYC 1 cut(s) 1433
EgeI GGCGCC 2 cut(s) 194, 782
EheI GGCGCC 2 cut(s) 194, 782
FaeI CATG 9 cut(s) 346, 490, 869, 1042, 1049, 1100, 1119, 1126, 1216
FalI AAGNNNNNCTT 2 cut(s) 266, 298
FaqI GGGAC 1 cut(s) 1388
FatI CATG 9 cut(s) 342, 486, 865, 1038, 1045, 1096, 1115, 1122, 1212
FauI CCCGC 3 cut(s) 46, 239, 610
FblI GTMKAC 1 cut(s) 234
FokI GGATG 6 cut(s) 119, 746, 1216, 1272, 1314, 1402
FriOI GRGCYC 1 cut(s) 1433
FspBI CTAG 1 cut(s) 56
GlaI GCGC 9 cut(s) 6, 49, 97, 155, 182, 194, 564, 782, 1451
GsaI CCCAGC 2 cut(s) 472, 873
GsuI CTGGAG 4 cut(s) 664, 849, 987, 1047
HaeII RGCGCY 5 cut(s) 99, 157, 184, 196, 784
HaeIII GGCC 8 cut(s) 15, 102, 150, 478, 1228, 1283, 1410, 1463
HgaI GACGC 2 cut(s) 125, 266
HhaI GCGC 9 cut(s) 7, 50, 98, 156, 183, 195, 565, 783, 1452
Hin1I GRCGYC 4 cut(s) 117, 193, 258, 781
Hin1II CATG 9 cut(s) 346, 490, 869, 1042, 1049, 1100, 1119, 1126, 1216
Hin6I GCGC 9 cut(s) 5, 48, 96, 154, 181, 193, 563, 781, 1450
HinP1I GCGC 9 cut(s) 5, 48, 96, 154, 181, 193, 563, 781, 1450
HinfI GANTC 6 cut(s) 200, 926, 1330, 1402, 1423, 1493
HphI GGTGA 1 cut(s) 1199
Hpy166II GTNNAC 6 cut(s) 235, 297, 508, 721, 1174, 1507
Hpy188I TCNGA 9 cut(s) 352, 457, 538, 689, 1301, 1329, 1341, 1389, 1428
Hpy188III TCNNGA 8 cut(s) 113, 298, 334, 400, 612, 774, 1399, 1420
Hpy8I GTNNAC 6 cut(s) 235, 297, 508, 721, 1174, 1507
Hpy99I CGWCG 8 cut(s) 119, 218, 260, 304, 501, 542, 719, 1440
HpyAV CCTTC 4 cut(s) 140, 397, 771, 1153
HpyCH4III ACNGT 3 cut(s) 505, 744, 1511
HpyCH4IV ACGT 7 cut(s) 270, 379, 540, 595, 717, 1110, 1438
HpyCH4V TGCA 7 cut(s) 211, 763, 944, 1042, 1305, 1393, 1480
HpyF10VI GCNNNNNNNGC 7 cut(s) 47, 76, 566, 569, 1139, 1289, 1302
HpyF3I CTNAG 5 cut(s) 686, 891, 1091, 1328, 1427
HpySE526I ACGT 7 cut(s) 270, 379, 540, 595, 717, 1110, 1438
Hsp92I GRCGYC 4 cut(s) 117, 193, 258, 781
Hsp92II CATG 9 cut(s) 346, 490, 869, 1042, 1049, 1100, 1119, 1126, 1216
HspAI GCGC 9 cut(s) 5, 48, 96, 154, 181, 193, 563, 781, 1450
KasI GGCGCC 2 cut(s) 192, 780
KflI GGGWCCC 1 cut(s) 1375
KroI GCCGGC 3 cut(s) 98, 227, 260
KroNI GCCGGC 3 cut(s) 100, 229, 262
Kzo9I GATC 4 cut(s) 175, 339, 533, 1014
LmnI GCTCC 9 cut(s) 75, 161, 171, 224, 318, 352, 683, 749, 965
Lsp1109I GCAGC 9 cut(s) 54, 62, 547, 559, 764, 1054, 1126, 1272, 1492
LweI GCATC 6 cut(s) 141, 330, 779, 1292, 1305, 1380
MaeI CTAG 1 cut(s) 56
MaeII ACGT 7 cut(s) 270, 379, 540, 595, 717, 1110, 1438
MaeIII GTNAC 7 cut(s) 591, 596, 738, 1034, 1048, 1187, 1232
MalI GATC 4 cut(s) 177, 341, 535, 1016
MboI GATC 4 cut(s) 175, 339, 533, 1014
MboII GAAGA 5 cut(s) 130, 133, 421, 494, 1009
MfeI CAATTG 1 cut(s) 1154
MflI RGATCY 1 cut(s) 533
MhlI GDGCHC 2 cut(s) 704, 1433
MluCI AATT 1 cut(s) 1154
Mly113I GGCGCC 2 cut(s) 193, 781
MlyI GAGTC 3 cut(s) 194, 1339, 1396
MmeI TCCRAC 4 cut(s) 330, 480, 561, 1198
Mph1103I ATGCAT 1 cut(s) 1395
MreI CGCCGGCG 2 cut(s) 227, 260
MroNI GCCGGC 3 cut(s) 98, 227, 260
MroXI GAANNNNTTC 1 cut(s) 725
MseI TTAA 2 cut(s) 840, 876
MslI CAYNNNNRTG 1 cut(s) 666
MspA1I CMGCKG 4 cut(s) 413, 560, 572, 1139
MunI CAATTG 1 cut(s) 1154
Mva1269I GAATGC 1 cut(s) 946
MvaI CCWGG 6 cut(s) 437, 731, 972, 1005, 1026, 1169
MvnI CGCG 3 cut(s) 7, 48, 1231
MwoI GCNNNNNNNGC 7 cut(s) 47, 76, 566, 569, 1139, 1289, 1302
NaeI GCCGGC 3 cut(s) 100, 229, 262
NarI GGCGCC 2 cut(s) 193, 781
NciI CCSGG 6 cut(s) 26, 27, 420, 530, 531, 1256
NdeII GATC 4 cut(s) 175, 339, 533, 1014
NgoMIV GCCGGC 3 cut(s) 98, 227, 260
NlaIII CATG 9 cut(s) 346, 490, 869, 1042, 1049, 1100, 1119, 1126, 1216
NlaIV GGNNCC 8 cut(s) 194, 220, 388, 417, 535, 782, 1376, 1377
NmuCI GTSAC 3 cut(s) 591, 596, 1187
NsiI ATGCAT 1 cut(s) 1395
NspI RCATGY 4 cut(s) 869, 1042, 1049, 1126
NspV TTCGAA 3 cut(s) 144, 924, 1082
PaeI GCATGC 1 cut(s) 869
PaeR7I CTCGAG 1 cut(s) 610
PceI AGGCCT 1 cut(s) 1410
PcsI WCGNNNNNNNCGW 3 cut(s) 111, 261, 546
PctI GAATGC 1 cut(s) 946
PdiI GCCGGC 3 cut(s) 100, 229, 262
PdmI GAANNNNTTC 1 cut(s) 725
PfeI GAWTC 3 cut(s) 926, 1423, 1493
PflFI GACNNNGTC 1 cut(s) 269
PfoI TCCNGGA 1 cut(s) 729
PleI GAGTC 3 cut(s) 194, 1338, 1396
PluTI GGCGCC 2 cut(s) 196, 784
PmaCI CACGTG 1 cut(s) 596
PmlI CACGTG 1 cut(s) 596
PpsI GAGTC 3 cut(s) 194, 1338, 1396
Ppu21I YACGTR 1 cut(s) 596
PpuMI RGGWCCY 1 cut(s) 1375
PshAI GACNNNNGTC 1 cut(s) 495
PshBI ATTAAT 1 cut(s) 876
Psp5II RGGWCCY 1 cut(s) 1375
Psp6I CCWGG 6 cut(s) 435, 729, 970, 1003, 1024, 1167
PspCI CACGTG 1 cut(s) 596
PspFI CCCAGC 2 cut(s) 468, 869
PspGI CCWGG 6 cut(s) 435, 729, 970, 1003, 1024, 1167
PspN4I GGNNCC 8 cut(s) 194, 220, 388, 417, 535, 782, 1376, 1377
PspPI GGNCC 4 cut(s) 1226, 1282, 1375, 1461
PspPPI RGGWCCY 1 cut(s) 1375
PsuI RGATCY 1 cut(s) 533
PsyI GACNNNGTC 1 cut(s) 269
RsaI GTAC 4 cut(s) 251, 509, 674, 1441
RsaNI GTAC 4 cut(s) 250, 508, 673, 1440
RseI CAYNNNNRTG 1 cut(s) 666
SaqAI TTAA 2 cut(s) 840, 876
Sau3AI GATC 4 cut(s) 175, 339, 533, 1014
Sau96I GGNCC 4 cut(s) 1226, 1282, 1375, 1461
SchI GAGTC 3 cut(s) 194, 1339, 1396
SduI GDGCHC 2 cut(s) 704, 1433
SfaNI GCATC 6 cut(s) 141, 330, 779, 1292, 1305, 1380
SfoI GGCGCC 2 cut(s) 194, 782
Sfr274I CTCGAG 1 cut(s) 610
SfuI TTCGAA 3 cut(s) 144, 924, 1082
SgrAI CRCCGGYG 2 cut(s) 227, 260
SinI GGWCC 1 cut(s) 1375
SlaI CTCGAG 1 cut(s) 610
SmaI CCCGGG 2 cut(s) 27, 531
SmiMI CAYNNNNRTG 1 cut(s) 666
SmlI CTYRAG 2 cut(s) 610, 1404
SmoI CTYRAG 2 cut(s) 610, 1404
SpeI ACTAGT 1 cut(s) 55
SphI GCATGC 1 cut(s) 869
Sse9I AATT 1 cut(s) 1154
SseBI AGGCCT 1 cut(s) 1410
SspDI GGCGCC 2 cut(s) 192, 780
SspI AATATT 1 cut(s) 998
SspMI CTAG 1 cut(s) 56
StuI AGGCCT 1 cut(s) 1410
TaaI ACNGT 3 cut(s) 505, 744, 1511
TaiI ACGT 7 cut(s) 273, 382, 543, 598, 720, 1113, 1441
TaqI TCGA 7 cut(s) 144, 516, 611, 628, 645, 924, 1082
TasI AATT 1 cut(s) 1154
TatI WGTACW 1 cut(s) 507
TauI GCSGC 4 cut(s) 560, 572, 1231, 1455
TfiI GAWTC 3 cut(s) 926, 1423, 1493
Tru1I TTAA 2 cut(s) 840, 876
Tru9I TTAA 2 cut(s) 840, 876
TscAI CASTG 1 cut(s) 1516
TseFI GTSAC 3 cut(s) 591, 596, 1187
TseI GCWGC 9 cut(s) 50, 67, 560, 572, 752, 1042, 1139, 1260, 1480
Tsp45I GTSAC 3 cut(s) 591, 596, 1187
TspDTI ATGAA 1 cut(s) 1460
TspGWI ACGGA 2 cut(s) 952, 1260
TspMI CCCGGG 2 cut(s) 25, 529
TspRI CASTG 1 cut(s) 1516
Tth111I GACNNNGTC 1 cut(s) 269
VpaK11BI GGWCC 1 cut(s) 1375
VspI ATTAAT 1 cut(s) 876
XagI CCTNNNNNAGG 1 cut(s) 401
XceI RCATGY 4 cut(s) 869, 1042, 1049, 1126
XhoI CTCGAG 1 cut(s) 610
XmaI CCCGGG 2 cut(s) 25, 529
XmiI GTMKAC 1 cut(s) 234
XmnI GAANNNNTTC 1 cut(s) 725
XspI CTAG 1 cut(s) 56
Zsp2I ATGCAT 1 cut(s) 1395
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.