pycom02g25100

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
23124440 .. 23125039
600 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g25100.1

Sequence Viewer

Length: 459 bp
ATGTCCCAAAATACTGAATCTGGGAACACACAGAGGAAGAATGTCCCAAATACTGAATTTGGGAAAGAGGAGAGACTGCCAATAAAGAAGGATGCTCCATATACTGATTCTGGGAACATGGAGAGACTACCTATTGGGAATGATGTCCGGAATAGGGATTTTCGGAACACGGAGACACCGTCGAAGAGAACGAACATCTCAATTACTGGGAACACGGAGACACCGTCGAAGAGGACGAACATCTCAATTACTGGAAAATTTGCAATCGACCCTACTCGACCCAGCACGCACACTCACTGCCGTCTCTACAGCATATACCACCGAAGCTCACGCATTCAACTCGACTTACAACCACTGAAGCCCTGCCAATCAACACTACTGCAACGCCAGAACGCAAGCAATTTGAAGTTGAGTTCGTATAAATACAACCGAAATGGCGAAAAGAAGACTGATTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

153

Amino Acids

17.43

Weight (kDa)

9.96

Isoelectric Point (pI)

46.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 147
AcsI RAATTY 2 cut(s) 56, 257
AcuI CTGAAG 1 cut(s) 377
AfiI CCNNNNNNNGG 1 cut(s) 154
AgsI TTSAA 2 cut(s) 338, 406
AluBI AGCT 1 cut(s) 327
AluI AGCT 1 cut(s) 327
Alw26I GTCTC 5 cut(s) 67, 118, 167, 212, 308
Aor13HI TCCGGA 1 cut(s) 147
ApoI RAATTY 2 cut(s) 56, 257
BbsI GAAGAC 1 cut(s) 452
BceAI ACGGC 1 cut(s) 285
BcgI CGANNNNNNTGC 2 cut(s) 322, 356
BcoDI GTCTC 5 cut(s) 67, 118, 167, 212, 308
BfaI CTAG 1 cut(s) 457
BfmI CTRYAG 1 cut(s) 307
BmrI ACTGGG 1 cut(s) 216
BmsI GCATC 1 cut(s) 82
BmuI ACTGGG 1 cut(s) 216
BpiI GAAGAC 1 cut(s) 452
BsaWI WCCGGW 1 cut(s) 147
BsaXI ACNNNNNCTCC 4 cut(s) 164, 194, 209, 239
Bsc4I CCNNNNNNNGG 1 cut(s) 154
Bse1I ACTGG 2 cut(s) 211, 256
BseAI TCCGGA 1 cut(s) 147
BseGI GGATG 1 cut(s) 97
BseLI CCNNNNNNNGG 1 cut(s) 154
BseNI ACTGG 2 cut(s) 211, 256
BseRI GAGGAG 1 cut(s) 83
BseYI CCCAGC 1 cut(s) 281
BsiSI CCGG 1 cut(s) 148
BslFI GGGAC 1 cut(s) 29
BslI CCNNNNNNNGG 1 cut(s) 154
BsmAI GTCTC 5 cut(s) 67, 118, 167, 212, 308
BsmBI CGTCTC 1 cut(s) 308
BsmFI GGGAC 1 cut(s) 29
BsmI GAATGC 1 cut(s) 333
Bsp13I TCCGGA 1 cut(s) 147
BspEI TCCGGA 1 cut(s) 147
BsrI ACTGG 2 cut(s) 211, 256
Bst4CI ACNGT 2 cut(s) 180, 225
Bst6I CTCTTC 2 cut(s) 179, 224
BstC8I GCNNGC 2 cut(s) 287, 397
BstF5I GGATG 1 cut(s) 97
BstMAI GTCTC 5 cut(s) 67, 118, 167, 212, 308
BstSFI CTRYAG 1 cut(s) 307
BstV2I GAAGAC 1 cut(s) 452
BtsCI GGATG 1 cut(s) 97
BtsI GCAGTG 1 cut(s) 295
BtsIMutI CAGTG 2 cut(s) 295, 353
Cac8I GCNNGC 2 cut(s) 287, 397
CviAII CATG 1 cut(s) 118
CviJI RGCY 2 cut(s) 327, 361
CviKI_1 RGCY 2 cut(s) 327, 361
Eam1104I CTCTTC 2 cut(s) 179, 224
EarI CTCTTC 2 cut(s) 179, 224
Eco57I CTGAAG 1 cut(s) 377
Esp3I CGTCTC 1 cut(s) 308
FaeI CATG 1 cut(s) 121
FaiI YATR 6 cut(s) 100, 102, 119, 314, 316, 420
FaqI GGGAC 1 cut(s) 29
FatI CATG 1 cut(s) 117
FokI GGATG 1 cut(s) 104
FspBI CTAG 1 cut(s) 457
GsaI CCCAGC 1 cut(s) 285
HapII CCGG 1 cut(s) 148
Hin1II CATG 1 cut(s) 121
HinfI GANTC 2 cut(s) 17, 107
HpaII CCGG 1 cut(s) 148
Hpy188I TCNGA 1 cut(s) 165
Hpy188III TCNNGA 1 cut(s) 148
Hpy99I CGWCG 2 cut(s) 184, 229
HpyAV CCTTC 1 cut(s) 82
HpyCH4III ACNGT 2 cut(s) 180, 225
HpyCH4V TGCA 2 cut(s) 263, 382
Hsp92II CATG 1 cut(s) 121
Kpn2I TCCGGA 1 cut(s) 147
LmnI GCTCC 1 cut(s) 100
LpnPI CCDG 8 cut(s) 6, 96, 161, 192, 237, 295, 376, 401
LweI GCATC 1 cut(s) 82
MaeI CTAG 1 cut(s) 457
MboII GAAGA 4 cut(s) 49, 196, 241, 457
MluCI AATT 5 cut(s) 56, 201, 246, 257, 400
MnlI CCTC 3 cut(s) 27, 61, 225
MroI TCCGGA 1 cut(s) 147
MspI CCGG 1 cut(s) 148
Mva1269I GAATGC 1 cut(s) 333
NlaIII CATG 1 cut(s) 121
PcsI WCGNNNNNNNCGW 4 cut(s) 176, 188, 221, 233
PctI GAATGC 1 cut(s) 333
PfeI GAWTC 2 cut(s) 17, 107
PflFI GACNNNGTC 2 cut(s) 178, 223
PspFI CCCAGC 1 cut(s) 281
PsyI GACNNNGTC 2 cut(s) 178, 223
SetI ASST 2 cut(s) 133, 329
SfaNI GCATC 1 cut(s) 82
SfcI CTRYAG 1 cut(s) 307
Sse9I AATT 5 cut(s) 56, 201, 246, 257, 400
SspMI CTAG 1 cut(s) 457
TaaI ACNGT 2 cut(s) 180, 225
TaqI TCGA 5 cut(s) 182, 227, 267, 277, 342
TasI AATT 5 cut(s) 56, 201, 246, 257, 400
TfiI GAWTC 2 cut(s) 17, 107
TscAI CASTG 2 cut(s) 302, 360
TspGWI ACGGA 2 cut(s) 185, 230
TspRI CASTG 2 cut(s) 302, 360
Tth111I GACNNNGTC 2 cut(s) 178, 223
XapI RAATTY 2 cut(s) 56, 257
XspI CTAG 1 cut(s) 457
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.