Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0001050

Physical Location & Seq

Genomic Coordinates Reverse (-)

30268218 .. 30280072

Gene Structure 11855 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000023938

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1515 bp

ATGTCAAATATATACTCTGATGCAAATAATCTAGAAGGGGTTTTAAAGGTTCGGGTTATGATGAAGGAGACGCAGCTCAAAAAGGAGCCAGGGTGTAGCTATGTTGAGTGTAAAGGAAGAGTTCAGGTTTTCTTGGCTGGGGATAGAAGCCATTGTCAGACAGAAGATATATACAGCATATTGGAGGAGTTGGAAAATTCAGCCCGGGAACCTGGCGCGTCCAATGAGAATGGAGAAAGAAACAAAGAGCAAATGGCTTTGACGCCATTGAATTTCACTAACCTCCTCAACAATAAATTAGCCTTTAATGACCTCAATGAACCATATTTGACATACGATTTCCCGGCGAGTCAGTATCATCCACCCTATGAAGATTGCACTTATGAAGAGACACCTACTAGTGAAAAAGCACAAAGACAAGCTCAAAGACAAAAGTGGTCTGCTGAACAGAGTGAAAAATCATTAACAAACCGGTGGTCAACAATCAGCAGCACTGTGAGTAAGTTTTGTGGACATTATGCTCAAATTGAACACTTATGGAAAAGTGGTTATACGGAACAAGATAAGATAGTGGAAGCAAAAGAGAATTTCAAGCTAGAGGAAGGTCATGCATTTGTACTTGACCATTGTTGGGTTGTTTTGAGCTTGAAGAGACCAATTGGGAGAAAGGCTGCAAAGGAAGCTATCAAAAAGGCAAAATCCAAAGAACAGGTTGGTGAAAATGAGAATGAATCTTCAAAAACCCGTTCTGAGTTGGAAGAGTTGAGGGCAAGGAGATTAGAAAGTGACCGTATAAAGGCAGAACAATTTAAGTTGCTGCTTGCTACTAAGCAAAAGCAAGTTGCTCTTAGAGTAAAGGAAATTGAAATTCAGACCCGAAGTGAGGATGCAAAAATAATGTCTATGGATACTAGTGTCATGCCTCCATTTCAAGCAGAATATTTTATCAGTCTTCAAAAGGAAATCTTGGCAAAAAGAGCTAGTAGGAATGAAAATCAATGGTCATTTGTGTTGAAACTCGTGCTCGCTCGCTCTGATCGCCACGTGGTGCGCTATGTTCTAGCCGGCCCTGTCAGCGACCAGAAAACACTGCCTGAGATTCGTGCCCTCGAACAAGCTGCTTTGACTGTCATCGATGAACTTGAGGACATGGAAACCGTCGTCGTACAGGCACAGATCCCGATGCTCCAGCGCGAGGCGGTAGTTGACGGAGACGACGGTAGCGGGGAGCTCAAACCCCAAAACACGGACCCTAATCCCCTTCTTATTCTACCCCTTCCACAATCATCTCTATCGCCACCGCCGGCTCCACCGCGGCCTCCGACGACATACGCCATCTCCGTCGGCTCCCTTAACGACCACGCCGGCACCATCACCTCCCTCTACTTCTTCACCCGTCCCAGTCTCTTCGTCCCCCTCACCTTGTCTCCGGCGACGCCGATGGGTCGTTCTGCATCTACGAGGCCAACCCCTTCGTCCTCCTCGAGAATCTCCAGCCGCACCAAAAGGCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAM-associated

Protein Analysis

505

Amino Acids

56.93

Weight (kDa)

6.76

Isoelectric Point (pI)

56.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
E_motif	PF20431	1 - 36	1.2e-07	E motif
NAM-associated	PF14303	216 - 322	2.3e-06	No apical meristem-associated C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001050)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g29014 FvH4_5g31251 FvH4_6g30412 FvH4_7g13271
prunus_persica	Prupe.4G287300_v2.0.a1
pyrus_communis	pycom02g25100
rosa_laevigata	RLG00000014831 RLG00000016178 RLG00000018236 RLG00000023938 RLG00000029894 RLG00000033609
rosa_multiflora	Rmu_sc0000353.1_g000032 Rmu_sc0000453.1_g000001 Rmu_sc0000453.1_g000002 Rmu_sc0006593.1_g000011 Rmu_sc0008708.1_g000004 Rmu_sc0016357.1_g000001 Rmu_sc0020646.1_g000003 Rmu_sc0021515.1_g000001 Rmu_sc0022529.1_g000001 Rmu_ssc0000007.1_g000036
rosa_roxburghii	Rroxscaffold_2G00136660 Rroxscaffold_3G00259610 Rroxscaffold_4G00321120 Rroxscaffold_5G00360960 Rroxscaffold_6G00390120 Rroxscaffold_7G00185660 Rroxscaffold_7G00210600
rosa_rugosa	Rorug01G0079400 Rorug01G0079500 Rorug05G0091700
rosa_samantha	Rh1AG035100 Rh1AG206900 Rh1AG407300 Rh1AG407400 Rh1BG078000 Rh1CG021000 Rh1CG022600 Rh1CG094400 Rh1CG106900 Rh1CG191800 Rh1DG101300 Rh1DG115800 Rh2AG342500 Rh2AG565100 Rh2CG424000 Rh2CG463100 Rh2DG368700 Rh3CG298500 Rh3DG294400 Rh4CG123400 Rh5CG341800 Rh6AG163100 Rh6AG163200 Rh6DG128500 Rh7BG334100 Rh7DG175800 Rh7DG284000
rosa_wichuraiana	Rw5G039650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1367
AccII	CGCG	3 cut(s)	218, 1194, 1315
AciI	CCGC	6 cut(s)	1199, 1224, 1301, 1313, 1315, 1498
AclWI	GGATC	1 cut(s)	1171
AcsI	RAATTY	4 cut(s)	196, 271, 586, 867
AcvI	CACGTG	1 cut(s)	1045
AcyI	GRCGYC	2 cut(s)	263, 1436
AdeI	CACNNNGTG	1 cut(s)	1048
AfaI	GTAC	2 cut(s)	618, 1167
AfiI	CCNNNNNNNGG	5 cut(s)	631, 796, 883, 1195, 1246
AgeI	ACCGGT	1 cut(s)	471
AgsI	TTSAA	9 cut(s)	271, 530, 592, 649, 738, 866, 932, 956, 1015
AhlI	ACTAGT	2 cut(s)	398, 911
AjnI	CCWGG	2 cut(s)	88, 211
AluBI	AGCT	9 cut(s)	76, 99, 422, 595, 645, 683, 980, 1118, 1231
AluI	AGCT	9 cut(s)	76, 99, 422, 595, 645, 683, 980, 1118, 1231
Alw21I	GWGCWC	2 cut(s)	1026, 1233
Alw26I	GTCTC	6 cut(s)	62, 383, 646, 1206, 1409, 1431
AlwI	GGATC	1 cut(s)	1171
Ama87I	CYCGRG	2 cut(s)	204, 1483
AoxI	GGCC	3 cut(s)	1066, 1316, 1463
ApeKI	GCWGC	5 cut(s)	73, 489, 671, 817, 1118
ApoI	RAATTY	4 cut(s)	196, 271, 586, 867
ArsI	GACNNNNNNTTYG	4 cut(s)	461, 493, 884, 916
AsiGI	ACCGGT	1 cut(s)	471
AspLEI	GCGC	3 cut(s)	218, 1053, 1194
AspS9I	GGNCC	2 cut(s)	1067, 1249
AsuC2I	CCSGG	3 cut(s)	205, 206, 344
AsuHPI	GGTGA	4 cut(s)	728, 1366, 1384, 1411
AvaI	CYCGRG	2 cut(s)	204, 1483
AvaII	GGWCC	1 cut(s)	1249
BaeGI	GKGCMC	1 cut(s)	1108
BaeI	ACNNNNGTAYC	2 cut(s)	900, 933
BanI	GGYRCC	1 cut(s)	1367
BanII	GRGCYC	1 cut(s)	1233
BauI	CACGAG	1 cut(s)	1019
BbrPI	CACGTG	1 cut(s)	1045
BbsI	GAAGAC	1 cut(s)	944
Bbv12I	GWGCWC	2 cut(s)	1026, 1233
BbvI	GCAGC	5 cut(s)	85, 501, 658, 804, 1105
BccI	CCATC	3 cut(s)	1343, 1379, 1435
BcgI	CGANNNNNNTGC	2 cut(s)	1100, 1134
BciT130I	CCWGG	2 cut(s)	90, 213
BciVI	GTATCC	1 cut(s)	901
BcnI	CCSGG	3 cut(s)	205, 206, 344
BcoDI	GTCTC	6 cut(s)	62, 383, 646, 1206, 1409, 1431
BcuI	ACTAGT	2 cut(s)	398, 911
BfaI	CTAG	6 cut(s)	32, 399, 596, 912, 981, 1061
BfuI	GTATCC	1 cut(s)	901
BisI	GCNGC	7 cut(s)	74, 490, 672, 818, 1119, 1316, 1498
BlsI	GCNGC	7 cut(s)	75, 491, 673, 819, 1120, 1317, 1499
Bme1390I	CCNGG	5 cut(s)	90, 205, 206, 213, 344
Bme18I	GGWCC	1 cut(s)	1249
BmeT110I	CYCGRG	2 cut(s)	204, 1483
BmgT120I	GGNCC	2 cut(s)	1067, 1249
BmiI	GGNNCC	6 cut(s)	87, 210, 1251, 1308, 1348, 1369
BmrFI	CCNGG	5 cut(s)	90, 205, 206, 213, 344
BmrI	ACTGGG	1 cut(s)	1395
BmsI	GCATC	4 cut(s)	10, 877, 1173, 1463
BmuI	ACTGGG	1 cut(s)	1395
BpiI	GAAGAC	1 cut(s)	944
BpmI	CTGGAG	2 cut(s)	1172, 1477
BpuEI	CTTGAG	1 cut(s)	1163
BpuMI	CCSGG	3 cut(s)	205, 206, 344
Bsa29I	ATCGAT	1 cut(s)	1134
BsaAI	YACGTR	1 cut(s)	1045
BsaHI	GRCGYC	2 cut(s)	263, 1436
BsaI	GGTCTC	1 cut(s)	646
BsaJI	CCNNGG	3 cut(s)	89, 204, 1313
BsaWI	WCCGGW	1 cut(s)	471
BsaXI	ACNNNNNCTCC	6 cut(s)	77, 107, 1322, 1352, 1411, 1441
Bsc4I	CCNNNNNNNGG	5 cut(s)	631, 796, 883, 1195, 1246
Bse118I	RCCGGY	4 cut(s)	471, 1064, 1303, 1364
Bse1I	ACTGG	1 cut(s)	1401
BseBI	CCWGG	2 cut(s)	90, 213
BseCI	ATCGAT	1 cut(s)	1134
BseDI	CCNNGG	3 cut(s)	89, 204, 1313
BseGI	GGATG	2 cut(s)	358, 892
BseLI	CCNNNNNNNGG	5 cut(s)	631, 796, 883, 1195, 1246
BseMII	CTCAG	2 cut(s)	741, 1086
BseNI	ACTGG	1 cut(s)	1401
BseRI	GAGGAG	3 cut(s)	200, 275, 1471
BseSI	GKGCMC	1 cut(s)	1108
BseXI	GCAGC	5 cut(s)	85, 501, 658, 804, 1105
BseYI	CCCAGC	1 cut(s)	137
Bsh1236I	CGCG	3 cut(s)	218, 1194, 1315
BshFI	GGCC	3 cut(s)	1068, 1318, 1465
BshNI	GGYRCC	1 cut(s)	1367
BshTI	ACCGGT	1 cut(s)	471
BshVI	ATCGAT	1 cut(s)	1134
BsiHKAI	GWGCWC	2 cut(s)	1026, 1233
BsiHKCI	CYCGRG	2 cut(s)	204, 1483
BsiSI	CCGG	7 cut(s)	205, 344, 472, 1065, 1304, 1365, 1430
BslFI	GGGAC	2 cut(s)	1383, 1397
BslI	CCNNNNNNNGG	5 cut(s)	631, 796, 883, 1195, 1246
BsmAI	GTCTC	6 cut(s)	62, 383, 646, 1206, 1409, 1431
BsmBI	CGTCTC	2 cut(s)	62, 1206
BsmFI	GGGAC	2 cut(s)	1383, 1397
BsnI	GGCC	3 cut(s)	1068, 1318, 1465
Bso31I	GGTCTC	1 cut(s)	646
BsoBI	CYCGRG	2 cut(s)	204, 1483
Bsp1286I	GDGCHC	3 cut(s)	1026, 1108, 1233
Bsp143I	GATC	2 cut(s)	1036, 1176
BspACI	CCGC	6 cut(s)	1199, 1224, 1301, 1313, 1315, 1498
BspANI	GGCC	3 cut(s)	1068, 1318, 1465
BspCNI	CTCAG	2 cut(s)	742, 1087
BspDI	ATCGAT	1 cut(s)	1134
BspFNI	CGCG	3 cut(s)	218, 1194, 1315
BspLI	GGNNCC	6 cut(s)	87, 210, 1251, 1308, 1348, 1369
BspPI	GGATC	1 cut(s)	1171
BspT107I	GGYRCC	1 cut(s)	1367
BspTNI	GGTCTC	1 cut(s)	646
BsrFI	RCCGGY	4 cut(s)	471, 1064, 1303, 1364
BsrI	ACTGG	1 cut(s)	1401
BssAI	RCCGGY	4 cut(s)	471, 1064, 1303, 1364
BssECI	CCNNGG	3 cut(s)	89, 204, 1313
BssMI	GATC	2 cut(s)	1036, 1176
BssNI	GRCGYC	2 cut(s)	263, 1436
BssSI	CACGAG	1 cut(s)	1019
Bst2BI	CACGAG	1 cut(s)	1019
Bst2UI	CCWGG	2 cut(s)	90, 213
Bst4CI	ACNGT	5 cut(s)	496, 791, 1129, 1159, 1220
Bst6I	CTCTTC	5 cut(s)	112, 381, 644, 753, 1412
BstACI	GRCGYC	2 cut(s)	263, 1436
BstBAI	YACGTR	1 cut(s)	1045
BstC8I	GCNNGC	6 cut(s)	822, 1026, 1030, 1066, 1305, 1366
BstDEI	CTNAG	4 cut(s)	750, 828, 848, 1095
BstDSI	CCRYGG	1 cut(s)	1313
BstF5I	GGATG	2 cut(s)	358, 892
BstFNI	CGCG	3 cut(s)	218, 1194, 1315
BstHHI	GCGC	3 cut(s)	218, 1053, 1194
BstKTI	GATC	2 cut(s)	1039, 1179
BstMAI	GTCTC	6 cut(s)	62, 383, 646, 1206, 1409, 1431
BstMBI	GATC	2 cut(s)	1036, 1176
BstMWI	GCNNNNNNNGC	4 cut(s)	680, 977, 1038, 1074
BstNI	CCWGG	2 cut(s)	90, 213
BstSCI	CCNGG	5 cut(s)	88, 203, 204, 211, 342
BstSLI	GKGCMC	1 cut(s)	1108
BstUI	CGCG	3 cut(s)	218, 1194, 1315
BstV1I	GCAGC	5 cut(s)	85, 501, 658, 804, 1105
BstV2I	GAAGAC	1 cut(s)	944
BstX2I	RGATCY	1 cut(s)	1176
BstYI	RGATCY	1 cut(s)	1176
Bsu15I	ATCGAT	1 cut(s)	1134
BsuI	GTATCC	1 cut(s)	901
BsuRI	GGCC	3 cut(s)	1068, 1318, 1465
BsuTUI	ATCGAT	1 cut(s)	1134
BtgI	CCRYGG	1 cut(s)	1313
BtsCI	GGATG	2 cut(s)	358, 892
BtsI	GCAGTG	1 cut(s)	1088
BtsIMutI	CAGTG	2 cut(s)	492, 1088
Cac8I	GCNNGC	6 cut(s)	822, 1026, 1030, 1066, 1305, 1366
CfoI	GCGC	3 cut(s)	218, 1053, 1194
Cfr10I	RCCGGY	4 cut(s)	471, 1064, 1303, 1364
Cfr13I	GGNCC	2 cut(s)	1067, 1249
Cfr42I	CCGCGG	1 cut(s)	1316
Cfr9I	CCCGGG	1 cut(s)	204
ClaI	ATCGAT	1 cut(s)	1134
CseI	GACGC	4 cut(s)	79, 207, 271, 1444
Csp6I	GTAC	2 cut(s)	617, 1166
CspAI	ACCGGT	1 cut(s)	471
CviAII	CATG	3 cut(s)	608, 919, 1150
CviQI	GTAC	2 cut(s)	617, 1166
DdeI	CTNAG	4 cut(s)	750, 828, 848, 1095
DpnI	GATC	2 cut(s)	1038, 1178
DpnII	GATC	2 cut(s)	1036, 1176
DraI	TTTAAA	1 cut(s)	45
DraIII	CACNNNGTG	1 cut(s)	1048
Eam1104I	CTCTTC	5 cut(s)	112, 381, 644, 753, 1412
EarI	CTCTTC	5 cut(s)	112, 381, 644, 753, 1412
Ecl136II	GAGCTC	1 cut(s)	1231
Eco24I	GRGCYC	1 cut(s)	1233
Eco31I	GGTCTC	1 cut(s)	646
Eco47I	GGWCC	1 cut(s)	1249
Eco53kI	GAGCTC	1 cut(s)	1231
Eco72I	CACGTG	1 cut(s)	1045
Eco88I	CYCGRG	2 cut(s)	204, 1483
EcoICRI	GAGCTC	1 cut(s)	1231
EcoRII	CCWGG	2 cut(s)	88, 211
EcoT22I	ATGCAT	1 cut(s)	613
EcoT38I	GRGCYC	1 cut(s)	1233
Esp3I	CGTCTC	2 cut(s)	62, 1206
FaeI	CATG	3 cut(s)	611, 922, 1153
FalI	AAGNNNNNCTT	4 cut(s)	831, 863, 950, 982
FaqI	GGGAC	2 cut(s)	1383, 1397
FatI	CATG	3 cut(s)	607, 918, 1149
FauI	CCCGC	1 cut(s)	1217
Fnu4HI	GCNGC	7 cut(s)	74, 490, 672, 818, 1119, 1316, 1498
FokI	GGATG	2 cut(s)	345, 899
FriOI	GRGCYC	1 cut(s)	1233
Fsp4HI	GCNGC	7 cut(s)	74, 490, 672, 818, 1119, 1316, 1498
FspBI	CTAG	6 cut(s)	32, 399, 596, 912, 981, 1061
GlaI	GCGC	3 cut(s)	217, 1052, 1193
GluI	GCNGC	7 cut(s)	74, 490, 672, 818, 1119, 1316, 1498
GsaI	CCCAGC	1 cut(s)	141
GsuI	CTGGAG	2 cut(s)	1172, 1477
HaeIII	GGCC	3 cut(s)	1068, 1318, 1465
HapII	CCGG	7 cut(s)	205, 344, 472, 1065, 1304, 1365, 1430
HgaI	GACGC	4 cut(s)	79, 207, 271, 1444
HhaI	GCGC	3 cut(s)	218, 1053, 1194
Hin1I	GRCGYC	2 cut(s)	263, 1436
Hin1II	CATG	3 cut(s)	611, 922, 1153
Hin6I	GCGC	3 cut(s)	216, 1051, 1192
HinP1I	GCGC	3 cut(s)	216, 1051, 1192
HincII	GTYRAC	2 cut(s)	480, 1207
HindII	GTYRAC	2 cut(s)	480, 1207
HinfI	GANTC	4 cut(s)	349, 731, 1099, 1488
HpaII	CCGG	7 cut(s)	205, 344, 472, 1065, 1304, 1365, 1430
HphI	GGTGA	4 cut(s)	728, 1366, 1384, 1411
Hpy166II	GTNNAC	3 cut(s)	480, 512, 1207
Hpy188I	TCNGA	6 cut(s)	19, 159, 751, 873, 1036, 1323
Hpy188III	TCNNGA	3 cut(s)	32, 1180, 1485
Hpy8I	GTNNAC	3 cut(s)	480, 512, 1207
Hpy99I	CGWCG	6 cut(s)	1163, 1166, 1220, 1327, 1346, 1438
HpyAV	CCTTC	6 cut(s)	29, 58, 596, 1271, 1286, 1482
HpyCH4III	ACNGT	5 cut(s)	496, 791, 1129, 1159, 1220
HpyCH4IV	ACGT	1 cut(s)	1044
HpyCH4V	TGCA	6 cut(s)	23, 378, 611, 674, 890, 1454
HpyF10VI	GCNNNNNNNGC	4 cut(s)	680, 977, 1038, 1074
HpyF3I	CTNAG	4 cut(s)	750, 828, 848, 1095
HpySE526I	ACGT	1 cut(s)	1044
Hsp92I	GRCGYC	2 cut(s)	263, 1436
Hsp92II	CATG	3 cut(s)	611, 922, 1153
HspAI	GCGC	3 cut(s)	216, 1051, 1192
KroI	GCCGGC	3 cut(s)	1064, 1303, 1364
KroNI	GCCGGC	3 cut(s)	1066, 1305, 1366
KspI	CCGCGG	1 cut(s)	1316
Kzo9I	GATC	2 cut(s)	1036, 1176
LmnI	GCTCC	5 cut(s)	85, 1191, 1228, 1312, 1352
Lsp1109I	GCAGC	5 cut(s)	85, 501, 658, 804, 1105
LweI	GCATC	4 cut(s)	10, 877, 1173, 1463
MaeI	CTAG	6 cut(s)	32, 399, 596, 912, 981, 1061
MaeII	ACGT	1 cut(s)	1044
MaeIII	GTNAC	1 cut(s)	785
MalI	GATC	2 cut(s)	1038, 1178
MboI	GATC	2 cut(s)	1036, 1176
MfeI	CAATTG	1 cut(s)	657
MflI	RGATCY	1 cut(s)	1176
MhlI	GDGCHC	3 cut(s)	1026, 1108, 1233
MluCI	AATT	9 cut(s)	196, 271, 296, 525, 586, 657, 806, 861, 867
MlyI	GAGTC	1 cut(s)	358
MmeI	TCCRAC	3 cut(s)	171, 735, 1346
Mph1103I	ATGCAT	1 cut(s)	613
MroNI	GCCGGC	3 cut(s)	1064, 1303, 1364
MseI	TTAA	5 cut(s)	44, 306, 464, 810, 1353
MspA1I	CMGCKG	1 cut(s)	1315
MspI	CCGG	7 cut(s)	205, 344, 472, 1065, 1304, 1365, 1430
MspR9I	CCNGG	5 cut(s)	90, 205, 206, 213, 344
MunI	CAATTG	1 cut(s)	657
MvaI	CCWGG	2 cut(s)	90, 213
MvnI	CGCG	3 cut(s)	218, 1194, 1315
MwoI	GCNNNNNNNGC	4 cut(s)	680, 977, 1038, 1074
NaeI	GCCGGC	3 cut(s)	1066, 1305, 1366
NciI	CCSGG	3 cut(s)	205, 206, 344
NdeII	GATC	2 cut(s)	1036, 1176
NgoMIV	GCCGGC	3 cut(s)	1064, 1303, 1364
NlaIII	CATG	3 cut(s)	611, 922, 1153
NlaIV	GGNNCC	6 cut(s)	87, 210, 1251, 1308, 1348, 1369
NmuCI	GTSAC	1 cut(s)	785
NsiI	ATGCAT	1 cut(s)	613
PaeR7I	CTCGAG	1 cut(s)	1483
PcsI	WCGNNNNNNNCGW	2 cut(s)	1338, 1481
PdiI	GCCGGC	3 cut(s)	1066, 1305, 1366
PfeI	GAWTC	3 cut(s)	731, 1099, 1488
PinAI	ACCGGT	1 cut(s)	471
PkrI	GCNGC	7 cut(s)	75, 491, 673, 819, 1120, 1317, 1499
PleI	GAGTC	1 cut(s)	357
PmaCI	CACGTG	1 cut(s)	1045
PmlI	CACGTG	1 cut(s)	1045
PpsI	GAGTC	1 cut(s)	357
Ppu21I	YACGTR	1 cut(s)	1045
Psp124BI	GAGCTC	1 cut(s)	1233
Psp6I	CCWGG	2 cut(s)	88, 211
PspCI	CACGTG	1 cut(s)	1045
PspFI	CCCAGC	1 cut(s)	137
PspGI	CCWGG	2 cut(s)	88, 211
PspN4I	GGNNCC	6 cut(s)	87, 210, 1251, 1308, 1348, 1369
PspPI	GGNCC	2 cut(s)	1067, 1249
PsuI	RGATCY	1 cut(s)	1176
RsaI	GTAC	2 cut(s)	618, 1167
RsaNI	GTAC	2 cut(s)	617, 1166
SacI	GAGCTC	1 cut(s)	1233
SacII	CCGCGG	1 cut(s)	1316
SaqAI	TTAA	5 cut(s)	44, 306, 464, 810, 1353
SatI	GCNGC	7 cut(s)	74, 490, 672, 818, 1119, 1316, 1498
Sau3AI	GATC	2 cut(s)	1036, 1176
Sau96I	GGNCC	2 cut(s)	1067, 1249
SchI	GAGTC	1 cut(s)	358
ScrFI	CCNGG	5 cut(s)	90, 205, 206, 213, 344
SduI	GDGCHC	3 cut(s)	1026, 1108, 1233
SfaNI	GCATC	4 cut(s)	10, 877, 1173, 1463
Sfr274I	CTCGAG	1 cut(s)	1483
Sfr303I	CCGCGG	1 cut(s)	1316
SgrBI	CCGCGG	1 cut(s)	1316
SinI	GGWCC	1 cut(s)	1249
SlaI	CTCGAG	1 cut(s)	1483
SmaI	CCCGGG	1 cut(s)	206
SmlI	CTYRAG	2 cut(s)	1142, 1483
SmoI	CTYRAG	2 cut(s)	1142, 1483
SpeI	ACTAGT	2 cut(s)	398, 911
Sse9I	AATT	9 cut(s)	196, 271, 296, 525, 586, 657, 806, 861, 867
SsiI	CCGC	6 cut(s)	1199, 1224, 1301, 1313, 1315, 1498
SspI	AATATT	1 cut(s)	941
SspMI	CTAG	6 cut(s)	32, 399, 596, 912, 981, 1061
SstI	GAGCTC	1 cut(s)	1233
StyD4I	CCNGG	5 cut(s)	88, 203, 204, 211, 342
TaaI	ACNGT	5 cut(s)	496, 791, 1129, 1159, 1220
TaiI	ACGT	1 cut(s)	1047
TaqI	TCGA	3 cut(s)	1110, 1134, 1484
TasI	AATT	9 cut(s)	196, 271, 296, 525, 586, 657, 806, 861, 867
TatI	WGTACW	1 cut(s)	616
TauI	GCSGC	2 cut(s)	1318, 1500
TfiI	GAWTC	3 cut(s)	731, 1099, 1488
Tru1I	TTAA	5 cut(s)	44, 306, 464, 810, 1353
Tru9I	TTAA	5 cut(s)	44, 306, 464, 810, 1353
TscAI	CASTG	2 cut(s)	499, 1095
TseFI	GTSAC	1 cut(s)	785
TseI	GCWGC	5 cut(s)	73, 489, 671, 817, 1118
Tsp45I	GTSAC	1 cut(s)	785
TspDTI	ATGAA	7 cut(s)	77, 333, 384, 399, 744, 1005, 1152
TspGWI	ACGGA	4 cut(s)	569, 1224, 1262, 1330
TspMI	CCCGGG	1 cut(s)	204
TspRI	CASTG	2 cut(s)	499, 1095
VpaK11BI	GGWCC	1 cut(s)	1249
XapI	RAATTY	4 cut(s)	196, 271, 586, 867
XbaI	TCTAGA	1 cut(s)	31
XhoI	CTCGAG	1 cut(s)	1483
XmaI	CCCGGG	1 cut(s)	204
XspI	CTAG	6 cut(s)	32, 399, 596, 912, 981, 1061
Zsp2I	ATGCAT	1 cut(s)	613

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.