pycom03g05610

oxidoreductase activity

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Forward (+)
4470749 .. 4470937
189 bp
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UTR
Exon/CDS
Intron
pycom03g05610.1

Sequence Viewer

Length: 189 bp
ATGAAAACAAGATATTCGGTGTCATTATTCTCATATAAAAATGGTATTGTGCAAGTACCTGAAGAGCTCGTTGATAACAAACACCCCTTACGATATAAGCCATTTGATCACTTTGATTTCCTTCGTTTCTATCTAACTGAGGAGGGACAGAAAGCTAAGCATGCTATCAAAGCCTACTGTGGTATTTGA

Protein Analysis

63

Amino Acids

7.37

Weight (kDa)

9.13

Isoelectric Point (pI)

33.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 81
AfaI GTAC 1 cut(s) 57
AluBI AGCT 2 cut(s) 67, 155
AluI AGCT 2 cut(s) 67, 155
Alw21I GWGCWC 1 cut(s) 69
BanII GRGCYC 1 cut(s) 69
Bbv12I GWGCWC 1 cut(s) 69
BclI TGATCA 1 cut(s) 106
BlpI GCTNAGC 1 cut(s) 156
Bpu1102I GCTNAGC 1 cut(s) 156
BseMII CTCAG 1 cut(s) 129
BseRI GAGGAG 1 cut(s) 155
BsiHKAI GWGCWC 1 cut(s) 69
BslFI GGGAC 1 cut(s) 159
BsmFI GGGAC 1 cut(s) 159
Bsp1286I GDGCHC 1 cut(s) 69
Bsp143I GATC 1 cut(s) 106
Bsp1720I GCTNAGC 1 cut(s) 156
BspCNI CTCAG 1 cut(s) 130
BspQI GCTCTTC 1 cut(s) 57
BssMI GATC 1 cut(s) 106
Bst4CI ACNGT 1 cut(s) 179
Bst6I CTCTTC 1 cut(s) 57
BstC8I GCNNGC 1 cut(s) 162
BstDEI CTNAG 2 cut(s) 138, 156
BstKTI GATC 1 cut(s) 109
BstMBI GATC 1 cut(s) 106
BstMWI GCNNNNNNNGC 2 cut(s) 161, 170
BstNSI RCATGY 1 cut(s) 164
Cac8I GCNNGC 1 cut(s) 162
Csp6I GTAC 1 cut(s) 56
CviAII CATG 1 cut(s) 161
CviJI RGCY 4 cut(s) 67, 100, 155, 173
CviKI_1 RGCY 4 cut(s) 67, 100, 155, 173
CviQI GTAC 1 cut(s) 56
DdeI CTNAG 2 cut(s) 138, 156
DpnI GATC 1 cut(s) 108
DpnII GATC 1 cut(s) 106
Eam1104I CTCTTC 1 cut(s) 57
EarI CTCTTC 1 cut(s) 57
Ecl136II GAGCTC 1 cut(s) 67
Eco24I GRGCYC 1 cut(s) 69
Eco53kI GAGCTC 1 cut(s) 67
Eco57I CTGAAG 1 cut(s) 81
EcoICRI GAGCTC 1 cut(s) 67
EcoT38I GRGCYC 1 cut(s) 69
FaeI CATG 1 cut(s) 164
FaiI YATR 4 cut(s) 34, 36, 96, 162
FaqI GGGAC 1 cut(s) 159
FatI CATG 1 cut(s) 160
FbaI TGATCA 1 cut(s) 106
FriOI GRGCYC 1 cut(s) 69
Hin1II CATG 1 cut(s) 164
HpyAV CCTTC 1 cut(s) 131
HpyCH4III ACNGT 1 cut(s) 179
HpyCH4V TGCA 1 cut(s) 52
HpyF10VI GCNNNNNNNGC 2 cut(s) 161, 170
HpyF3I CTNAG 2 cut(s) 138, 156
Hsp92II CATG 1 cut(s) 164
Ksp22I TGATCA 1 cut(s) 106
Kzo9I GATC 1 cut(s) 106
LguI GCTCTTC 1 cut(s) 57
LpnPI CCDG 1 cut(s) 72
MalI GATC 1 cut(s) 108
MboI GATC 1 cut(s) 106
MboII GAAGA 1 cut(s) 74
MhlI GDGCHC 1 cut(s) 69
MnlI CCTC 2 cut(s) 133, 136
MwoI GCNNNNNNNGC 2 cut(s) 161, 170
NdeII GATC 1 cut(s) 106
NlaIII CATG 1 cut(s) 164
NspI RCATGY 1 cut(s) 164
PaeI GCATGC 1 cut(s) 164
PciSI GCTCTTC 1 cut(s) 57
Psp124BI GAGCTC 1 cut(s) 69
RsaI GTAC 1 cut(s) 57
RsaNI GTAC 1 cut(s) 56
SacI GAGCTC 1 cut(s) 69
SapI GCTCTTC 1 cut(s) 57
Sau3AI GATC 1 cut(s) 106
SduI GDGCHC 1 cut(s) 69
SetI ASST 3 cut(s) 61, 69, 157
SgeI CNNG 5 cut(s) 21, 65, 71, 80, 173
SphI GCATGC 1 cut(s) 164
SstI GAGCTC 1 cut(s) 69
TaaI ACNGT 1 cut(s) 179
TspDTI ATGAA 1 cut(s) 17
XceI RCATGY 1 cut(s) 164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.