Rorug04G0356200

oxidoreductase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000834
Physical Location & Seq
Forward (+)
52864745 .. 52869251
4507 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0356200.1

Sequence Viewer

Length: 2016 bp
ATGGCTTCTTCTTCAATTCACTACGATATTCGCTGCGCCCTTCTTCTTCACTTGGCCACGTCATCTTCATCATCGCCGTCGTCGTCGTCGCTATCCACGATTAGGACTCTCGGTCCCCACCGCATCACCTCGCGCGCCTCCGCGGTGCGTCGGGTGCTGTCGTCGTTCTCCTCATCGCCGCGGACGACGTCGTTCCGCGTCAGAGCTTTCTCCAATGACGAGTCGAAAGAGGCCGTGGAGCTTCCGGAGAAGCCGTCGATATGCACCGCCGACGAGCTCCACTACGTCTCCGTGCCCGACTCCGATTGGAGGCTCGCCCTCTGGCGCTACCGCCCTTGCCCCAAGGCCCCTCAGAGGAATCACCCATTGCTGCTATTGTCTGGGGTGGGGACCAATGCAATTGGATATGATCTCTCTCCTGAGTCGTCATTTGCACGTTACATGTCTGGGCAAGGATTTGAGACATGGGTTCTCGAAGTTCGTGGTGCTGGATTGAGTGTTCATGAAGCAAATAGGAAACAAATCCAGGAGTCTGCCCATGCAAAATCTGAACAAATGGAATCTGTGTCTAAGGGTGCAACAAATGGAGCTTTTTCTGCAGAAAAACAGTCAAATAGCTTCTCTGGTGCCCGTGCAAAATCTGAACAGATGGAAGCTGTTTCTCAGAGGGCAACTGATGGAGCTATTTCTACAGAAAAGCAGTCAAATAGTTTTCCTGGTGCTCGTGCAAAATCTGAACAGATGGAAGCTGTTTCTCAGAGTGCAACTGATGGAGCTATTTCTACAGAAAAGCAGTCAAATAGTTTTCCTGGTGCCTCAGCATTTGAAACTCCTGTTCACAAAATAAATGATCAGATTTCAGCTGCCAAAGGAGACCTTACAAGTATACCAACTGTAGGGGGCGAATCAAAATCCGTGACAAGTTTGACTGAAACTTTTACGCAGATGTCAGAACGATTGTCTGGCTTTCTTGGTGAAGGTCAATCCAGTATCATCTCTGCTAATTTACTTGATCAAATTTCAAAACTTTTTGCTGATTCTACCTTATCTGAGCGTTTCAATGATATAAGCAATAAGCTTTCAAGCCTCTTAGAGACAAGACAAAACTCTGCTATTGCTAGCCAAATCAGAGACCTCAGTCAAAGGCTTGTGAATATAATTGAAGAAGGTCAGCGGTCTGTTTCTCCATCACTGTTTGACTTGCAAGAGCGTCTTTCTTCCACACTAGAAGATTTTCAGAAGCAACTTGACTTGATGGTGAAGTATGACTGGGACTTTGATCACTACCTTGAAGAGGATATACCTGCTGTGATGGAGTATATATTGGCAGAAAGTAAGCCGAAAGATGGGAAGTTGTTAGCTATTGGGCACTCAATGGGTGGGATCTTGCTTTATGCAATGCTTTCACGATGTGGTTCTGAAGGAAGAACGTGCAACCTAGCAGCTGTTGTAACGCTGGCCTCATCACTTGATTACACATCTTCGAAATCAACTCTCAAATTGCTTATACCACTTGCAGACCCCGCCCAGGCTCTCAATGTCCCTGTTGTTCCTTTGGGGACATTATTGGCAGCGGCTTATCCTCTCTCATCCCGCTCTCCTTATGTCTTATCTTGGCTCAATGATCTGATTTCAGCAGAGGGCATGATGCATCCAGAATTATTGAAAAAGCTGGTTTTGAATAACTTTTGCACAATACCAGCAAAACTTCTGTTGCAGCTAACAACAGCTTTTAAGGAGGGTGGATTACGTGACAGGAGTGGCACCTACTTGTATAAGGATCATATACATAAAAGCAATGTCCCTATTTTGGCTCTTGCTGGAGATAAGGATCTAATATGCCCTCCTGAAGCTGTTGAAGAAACTGTTAAGGTAATACCAGAGCACCTGGTTACATATAAAGTTTTTGGAGAATCTGGAGGTGCACACTATGCTCATTATGATTTGGTAGGAGGCCGAATGGCAGCAGAGCAAGTCTATCCCTGTATAATTGAATTTCTTAGTCAGCATGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

671

Amino Acids

72.97

Weight (kDa)

5.85

Isoelectric Point (pI)

54.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 191
Acc36I ACCTGC 1 cut(s) 1312
AccB1I GGYRCC 3 cut(s) 626, 812, 1763
AccBSI CCGCTC 1 cut(s) 1596
AccI GTMKAC 1 cut(s) 886
AccII CGCG 5 cut(s) 133, 135, 143, 181, 198
AccIII TCCGGA 1 cut(s) 244
AclWI GGATC 3 cut(s) 1391, 1788, 1839
AcoI YGGCCR 1 cut(s) 54
AcsI RAATTY 2 cut(s) 1017, 1994
AcuI CTGAAG 2 cut(s) 1440, 1869
AcyI GRCGYC 1 cut(s) 188
AdeI CACNNNGTG 1 cut(s) 1412
AfiI CCNNNNNNNGG 8 cut(s) 102, 309, 354, 896, 1294, 1346, 1528, 1810
AflIII ACRYGT 1 cut(s) 441
AhdI GACNNNNNGTC 1 cut(s) 111
AjiI CACGTC 1 cut(s) 60
AjnI CCWGG 5 cut(s) 525, 715, 808, 1527, 1887
AloI GAACNNNNNNTCC 2 cut(s) 483, 515
Alw21I GWGCWC 4 cut(s) 279, 724, 1887, 1927
Alw26I GTCTC 5 cut(s) 292, 455, 867, 1088, 1125
Alw44I GTGCAC 1 cut(s) 1923
AlwI GGATC 3 cut(s) 1391, 1788, 1839
Aor13HI TCCGGA 1 cut(s) 244
AoxI GGCC 5 cut(s) 54, 231, 345, 1458, 1954
ApaLI GTGCAC 1 cut(s) 1923
ApeKI GCWGC 7 cut(s) 33, 370, 863, 1442, 1571, 1717, 1964
ApoI RAATTY 2 cut(s) 1017, 1994
ArsI GACNNNNNNTTYG 2 cut(s) 1259, 1291
Asp700I GAANNNNTTC 1 cut(s) 1233
AspLEI GCGC 4 cut(s) 38, 135, 137, 327
AspS9I GGNCC 3 cut(s) 113, 346, 390
AsuHPI GGTGA 4 cut(s) 118, 353, 986, 1270
AsuII TTCGAA 1 cut(s) 1484
AsuNHI GCTAGC 1 cut(s) 1118
AvaII GGWCC 2 cut(s) 113, 390
BaeGI GKGCMC 4 cut(s) 297, 631, 1371, 1927
BalI TGGCCA 1 cut(s) 56
BanI GGYRCC 3 cut(s) 626, 812, 1763
BanII GRGCYC 1 cut(s) 279
BarI GAAGNNNNNNTAC 2 cut(s) 1284, 1316
BauI CACGAG 1 cut(s) 723
Bbv12I GWGCWC 4 cut(s) 279, 724, 1887, 1927
BbvCI CCTCAGC 1 cut(s) 817
BbvI GCAGC 7 cut(s) 20, 357, 850, 1454, 1583, 1729, 1976
BccI CCATC 8 cut(s) 643, 671, 736, 764, 1195, 1249, 1306, 1340
BceAI ACGGC 3 cut(s) 61, 218, 238
BciT130I CCWGG 5 cut(s) 527, 717, 810, 1529, 1889
BclI TGATCA 3 cut(s) 850, 1012, 1279
BcoDI GTCTC 5 cut(s) 292, 455, 867, 1088, 1125
BfaI CTAG 3 cut(s) 1119, 1226, 1439
BfmI CTRYAG 4 cut(s) 597, 690, 783, 894
BfoI RGCGCY 1 cut(s) 328
BfuAI ACCTGC 1 cut(s) 1312
BisI GCNGC 9 cut(s) 34, 179, 371, 864, 1443, 1572, 1575, 1718, 1965
BlsI GCNGC 9 cut(s) 35, 180, 372, 865, 1444, 1573, 1576, 1719, 1966
Bme1390I CCNGG 5 cut(s) 527, 717, 810, 1529, 1889
Bme18I GGWCC 2 cut(s) 113, 390
BmeRI GACNNNNNGTC 1 cut(s) 111
BmgBI CACGTC 1 cut(s) 60
BmgT120I GGNCC 3 cut(s) 113, 346, 390
BmiI GGNNCC 6 cut(s) 115, 348, 391, 628, 814, 1765
BmrFI CCNGG 5 cut(s) 527, 717, 810, 1529, 1889
BmrI ACTGGG 1 cut(s) 1279
BmsI GCATC 3 cut(s) 132, 1638, 1660
BmtI GCTAGC 1 cut(s) 1122
BmuI ACTGGG 1 cut(s) 1279
BoxI GACNNNNGTC 1 cut(s) 1137
BpmI CTGGAG 2 cut(s) 1842, 1938
Bpu10I CCTNAGC 1 cut(s) 817
Bpu14I TTCGAA 1 cut(s) 1484
BsaAI YACGTR 1 cut(s) 1751
BsaBI GATNNNNATC 1 cut(s) 1830
BsaHI GRCGYC 1 cut(s) 188
BsaI GGTCTC 2 cut(s) 867, 1125
BsaJI CCNNGG 5 cut(s) 141, 179, 234, 342, 1527
BsaWI WCCGGW 1 cut(s) 244
BsaXI ACNNNNNCTCC 4 cut(s) 239, 269, 272, 302
Bsc4I CCNNNNNNNGG 8 cut(s) 102, 309, 354, 896, 1294, 1346, 1528, 1810
Bse1I ACTGG 2 cut(s) 987, 1274
Bse3DI GCAATG 3 cut(s) 365, 1404, 1804
Bse8I GATNNNNATC 1 cut(s) 1830
BseAI TCCGGA 1 cut(s) 244
BseBI CCWGG 5 cut(s) 527, 717, 810, 1529, 1889
BseDI CCNNGG 5 cut(s) 141, 179, 234, 342, 1527
BseGI GGATG 2 cut(s) 1589, 1651
BseJI GATNNNNATC 1 cut(s) 1830
BseLI CCNNNNNNNGG 8 cut(s) 102, 309, 354, 896, 1294, 1346, 1528, 1810
BseMI GCAATG 3 cut(s) 365, 1404, 1804
BseMII CTCAG 7 cut(s) 365, 411, 677, 770, 831, 1041, 1150
BseNI ACTGG 2 cut(s) 987, 1274
BsePI GCGCGC 1 cut(s) 133
BseRI GAGGAG 1 cut(s) 160
BseSI GKGCMC 4 cut(s) 297, 631, 1371, 1927
BseXI GCAGC 7 cut(s) 20, 357, 850, 1454, 1583, 1729, 1976
Bsh1236I CGCG 5 cut(s) 133, 135, 143, 181, 198
BshFI GGCC 5 cut(s) 56, 233, 347, 1460, 1956
BshNI GGYRCC 3 cut(s) 626, 812, 1763
BsiHKAI GWGCWC 4 cut(s) 279, 724, 1887, 1927
BsiSI CCGG 1 cut(s) 245
BslFI GGGAC 6 cut(s) 99, 403, 1286, 1526, 1573, 1787
BslI CCNNNNNNNGG 8 cut(s) 102, 309, 354, 896, 1294, 1346, 1528, 1810
BsmAI GTCTC 5 cut(s) 292, 455, 867, 1088, 1125
BsmBI CGTCTC 1 cut(s) 292
BsmFI GGGAC 6 cut(s) 99, 403, 1286, 1526, 1573, 1787
BsnI GGCC 5 cut(s) 56, 233, 347, 1460, 1956
Bso31I GGTCTC 2 cut(s) 867, 1125
Bsp119I TTCGAA 1 cut(s) 1484
Bsp1286I GDGCHC 7 cut(s) 279, 297, 631, 724, 1371, 1887, 1927
Bsp13I TCCGGA 1 cut(s) 244
Bsp143I GATC 8 cut(s) 409, 850, 1012, 1279, 1383, 1624, 1780, 1831
BspANI GGCC 5 cut(s) 56, 233, 347, 1460, 1956
BspCNI CTCAG 7 cut(s) 364, 412, 676, 769, 830, 1042, 1149
BspEI TCCGGA 1 cut(s) 244
BspFNI CGCG 5 cut(s) 133, 135, 143, 181, 198
BspHI TCATGA 1 cut(s) 502
BspLI GGNNCC 6 cut(s) 115, 348, 391, 628, 814, 1765
BspMAI CTGCAG 1 cut(s) 601
BspMI ACCTGC 1 cut(s) 1312
BspOI GCTAGC 1 cut(s) 1122
BspPI GGATC 3 cut(s) 1391, 1788, 1839
BspT104I TTCGAA 1 cut(s) 1484
BspT107I GGYRCC 3 cut(s) 626, 812, 1763
BspTNI GGTCTC 2 cut(s) 867, 1125
BsrBI CCGCTC 1 cut(s) 1596
BsrDI GCAATG 3 cut(s) 365, 1404, 1804
BsrI ACTGG 2 cut(s) 987, 1274
BssECI CCNNGG 5 cut(s) 141, 179, 234, 342, 1527
BssHII GCGCGC 1 cut(s) 133
BssMI GATC 8 cut(s) 409, 850, 1012, 1279, 1383, 1624, 1780, 1831
BssNAI GTATAC 1 cut(s) 887
BssNI GRCGYC 1 cut(s) 188
BssSI CACGAG 1 cut(s) 723
BssT1I CCWWGG 1 cut(s) 342
Bst1107I GTATAC 1 cut(s) 887
Bst2BI CACGAG 1 cut(s) 723
Bst2UI CCWGG 5 cut(s) 527, 717, 810, 1529, 1889
Bst4CI ACNGT 4 cut(s) 609, 895, 1194, 1867
Bst6I CTCTTC 1 cut(s) 1287
BstACI GRCGYC 1 cut(s) 188
BstAPI GCANNNNNTGC 1 cut(s) 1931
BstBAI YACGTR 1 cut(s) 1751
BstBI TTCGAA 1 cut(s) 1484
BstC8I GCNNGC 4 cut(s) 135, 315, 1120, 1458
BstDSI CCRYGG 3 cut(s) 141, 179, 234
BstENI CCTNNNNNAGG 1 cut(s) 1292
BstF5I GGATG 2 cut(s) 1589, 1651
BstFNI CGCG 5 cut(s) 133, 135, 143, 181, 198
BstH2I RGCGCY 1 cut(s) 328
BstHHI GCGC 4 cut(s) 38, 135, 137, 327
BstKTI GATC 8 cut(s) 412, 853, 1015, 1282, 1386, 1627, 1783, 1834
BstMAI GTCTC 5 cut(s) 292, 455, 867, 1088, 1125
BstMBI GATC 8 cut(s) 409, 850, 1012, 1279, 1383, 1624, 1780, 1831
BstMWI GCNNNNNNNGC 4 cut(s) 154, 596, 1523, 1931
BstNI CCWGG 5 cut(s) 527, 717, 810, 1529, 1889
BstNSI RCATGY 1 cut(s) 445
BstPAI GACNNNNGTC 1 cut(s) 1137
BstSCI CCNGG 5 cut(s) 525, 715, 808, 1527, 1887
BstSFI CTRYAG 4 cut(s) 597, 690, 783, 894
BstSLI GKGCMC 4 cut(s) 297, 631, 1371, 1927
BstUI CGCG 5 cut(s) 133, 135, 143, 181, 198
BstV1I GCAGC 7 cut(s) 20, 357, 850, 1454, 1583, 1729, 1976
BstX2I RGATCY 2 cut(s) 1383, 1831
BstYI RGATCY 2 cut(s) 1383, 1831
BstZ17I GTATAC 1 cut(s) 887
BsuRI GGCC 5 cut(s) 56, 233, 347, 1460, 1956
BtgI CCRYGG 3 cut(s) 141, 179, 234
BtgZI GCGATG 2 cut(s) 57, 159
BtrI CACGTC 1 cut(s) 60
BtsCI GGATG 2 cut(s) 1589, 1651
BtsIMutI CAGTG 1 cut(s) 1190
BveI ACCTGC 1 cut(s) 1312
Cac8I GCNNGC 4 cut(s) 135, 315, 1120, 1458
CciI TCATGA 1 cut(s) 502
CfoI GCGC 4 cut(s) 38, 135, 137, 327
Cfr13I GGNCC 3 cut(s) 113, 346, 390
Cfr42I CCGCGG 2 cut(s) 144, 182
CseI GACGC 3 cut(s) 137, 187, 1199
CsiI ACCWGGT 1 cut(s) 1887
CviAII CATG 6 cut(s) 442, 465, 503, 539, 1645, 2009
DpnI GATC 8 cut(s) 411, 852, 1014, 1281, 1385, 1626, 1782, 1833
DpnII GATC 8 cut(s) 409, 850, 1012, 1279, 1383, 1624, 1780, 1831
DraIII CACNNNGTG 1 cut(s) 1412
DriI GACNNNNNGTC 1 cut(s) 111
EaeI YGGCCR 1 cut(s) 54
Eam1104I CTCTTC 1 cut(s) 1287
Eam1105I GACNNNNNGTC 1 cut(s) 111
EarI CTCTTC 1 cut(s) 1287
Ecl136II GAGCTC 1 cut(s) 277
Eco130I CCWWGG 1 cut(s) 342
Eco24I GRGCYC 1 cut(s) 279
Eco31I GGTCTC 2 cut(s) 867, 1125
Eco47I GGWCC 2 cut(s) 113, 390
Eco53kI GAGCTC 1 cut(s) 277
Eco57I CTGAAG 2 cut(s) 1440, 1869
EcoICRI GAGCTC 1 cut(s) 277
EcoNI CCTNNNNNAGG 1 cut(s) 1292
EcoO109I RGGNCCY 1 cut(s) 346
EcoRII CCWGG 5 cut(s) 525, 715, 808, 1527, 1887
EcoT14I CCWWGG 1 cut(s) 342
EcoT22I ATGCAT 1 cut(s) 1653
EcoT38I GRGCYC 1 cut(s) 279
ErhI CCWWGG 1 cut(s) 342
Esp3I CGTCTC 1 cut(s) 292
FaeI CATG 6 cut(s) 445, 468, 506, 542, 1648, 2012
FalI AAGNNNNNCTT 4 cut(s) 861, 893, 1197, 1229
FaqI GGGAC 6 cut(s) 99, 403, 1286, 1526, 1573, 1787
FatI CATG 6 cut(s) 441, 464, 502, 538, 1644, 2008
FauI CCCGC 2 cut(s) 1531, 1601
FbaI TGATCA 3 cut(s) 850, 1012, 1279
FblI GTMKAC 1 cut(s) 886
Fnu4HI GCNGC 9 cut(s) 34, 179, 371, 864, 1443, 1572, 1575, 1718, 1965
FokI GGATG 2 cut(s) 1576, 1638
FriOI GRGCYC 1 cut(s) 279
Fsp4HI GCNGC 9 cut(s) 34, 179, 371, 864, 1443, 1572, 1575, 1718, 1965
FspBI CTAG 3 cut(s) 1119, 1226, 1439
GlaI GCGC 4 cut(s) 37, 134, 136, 326
GluI GCNGC 9 cut(s) 34, 179, 371, 864, 1443, 1572, 1575, 1718, 1965
GsuI CTGGAG 2 cut(s) 1842, 1938
HaeII RGCGCY 1 cut(s) 328
HaeIII GGCC 5 cut(s) 56, 233, 347, 1460, 1956
HapII CCGG 1 cut(s) 245
HgaI GACGC 3 cut(s) 137, 187, 1199
HhaI GCGC 4 cut(s) 38, 135, 137, 327
Hin1I GRCGYC 1 cut(s) 188
Hin1II CATG 6 cut(s) 445, 468, 506, 542, 1648, 2012
Hin6I GCGC 4 cut(s) 36, 133, 135, 325
HinP1I GCGC 4 cut(s) 36, 133, 135, 325
HindIII AAGCTT 1 cut(s) 1076
HpaII CCGG 1 cut(s) 245
HphI GGTGA 4 cut(s) 118, 353, 986, 1270
Hpy166II GTNNAC 3 cut(s) 838, 887, 1925
Hpy188III TCNNGA 8 cut(s) 245, 419, 473, 503, 1407, 1655, 1847, 1917
Hpy8I GTNNAC 3 cut(s) 838, 887, 1925
HpyAV CCTTC 4 cut(s) 50, 971, 1160, 1415
HpyCH4III ACNGT 4 cut(s) 609, 895, 1194, 1867
HpyCH4IV ACGT 6 cut(s) 59, 188, 285, 436, 1430, 1750
HpyF10VI GCNNNNNNNGC 4 cut(s) 154, 596, 1523, 1931
HpySE526I ACGT 6 cut(s) 59, 188, 285, 436, 1430, 1750
Hsp92I GRCGYC 1 cut(s) 188
Hsp92II CATG 6 cut(s) 445, 468, 506, 542, 1648, 2012
HspAI GCGC 4 cut(s) 36, 133, 135, 325
Kpn2I TCCGGA 1 cut(s) 244
Ksp22I TGATCA 3 cut(s) 850, 1012, 1279
KspI CCGCGG 2 cut(s) 144, 182
Kzo9I GATC 8 cut(s) 409, 850, 1012, 1279, 1383, 1624, 1780, 1831
LmnI GCTCC 5 cut(s) 238, 282, 587, 680, 773
Lsp1109I GCAGC 7 cut(s) 20, 357, 850, 1454, 1583, 1729, 1976
LweI GCATC 3 cut(s) 132, 1638, 1660
MabI ACCWGGT 1 cut(s) 1887
MaeI CTAG 3 cut(s) 1119, 1226, 1439
MaeII ACGT 6 cut(s) 59, 188, 285, 436, 1430, 1750
MaeIII GTNAC 5 cut(s) 437, 916, 1450, 1751, 1891
MalI GATC 8 cut(s) 411, 852, 1014, 1281, 1385, 1626, 1782, 1833
MbiI CCGCTC 1 cut(s) 1596
MboI GATC 8 cut(s) 409, 850, 1012, 1279, 1383, 1624, 1780, 1831
MfeI CAATTG 1 cut(s) 399
MflI RGATCY 2 cut(s) 1383, 1831
MhlI GDGCHC 7 cut(s) 279, 297, 631, 724, 1371, 1887, 1927
MlsI TGGCCA 1 cut(s) 56
MluCI AATT 9 cut(s) 15, 399, 1003, 1017, 1158, 1499, 1658, 1989, 1994
MluNI TGGCCA 1 cut(s) 56
MlyI GAGTC 5 cut(s) 100, 230, 293, 431, 539
Mox20I TGGCCA 1 cut(s) 56
Mph1103I ATGCAT 1 cut(s) 1653
MroI TCCGGA 1 cut(s) 244
MroXI GAANNNNTTC 1 cut(s) 1233
MscI TGGCCA 1 cut(s) 56
MseI TTAA 2 cut(s) 1734, 1869
Msp20I TGGCCA 1 cut(s) 56
MspA1I CMGCKG 6 cut(s) 143, 181, 863, 1174, 1445, 1574
MspI CCGG 1 cut(s) 245
MspR9I CCNGG 5 cut(s) 527, 717, 810, 1529, 1889
MunI CAATTG 1 cut(s) 399
MvaI CCWGG 5 cut(s) 527, 717, 810, 1529, 1889
MvnI CGCG 5 cut(s) 133, 135, 143, 181, 198
MwoI GCNNNNNNNGC 4 cut(s) 154, 596, 1523, 1931
NdeII GATC 8 cut(s) 409, 850, 1012, 1279, 1383, 1624, 1780, 1831
NheI GCTAGC 1 cut(s) 1118
NlaIII CATG 6 cut(s) 445, 468, 506, 542, 1648, 2012
NlaIV GGNNCC 6 cut(s) 115, 348, 391, 628, 814, 1765
NmuCI GTSAC 2 cut(s) 916, 1751
NsiI ATGCAT 1 cut(s) 1653
NspI RCATGY 1 cut(s) 445
NspV TTCGAA 1 cut(s) 1484
PagI TCATGA 1 cut(s) 502
PauI GCGCGC 1 cut(s) 133
PciI ACATGT 1 cut(s) 441
PcsI WCGNNNNNNNCGW 3 cut(s) 80, 95, 182
PdmI GAANNNNTTC 1 cut(s) 1233
PfeI GAWTC 5 cut(s) 358, 560, 905, 1037, 1913
PflFI GACNNNGTC 1 cut(s) 187
PfoI TCCNGGA 1 cut(s) 525
PkrI GCNGC 9 cut(s) 35, 180, 372, 865, 1444, 1573, 1576, 1719, 1966
PleI GAGTC 5 cut(s) 100, 229, 293, 430, 538
PpsI GAGTC 5 cut(s) 100, 229, 293, 430, 538
Ppu21I YACGTR 1 cut(s) 1751
PscI ACATGT 1 cut(s) 441
PshAI GACNNNNGTC 1 cut(s) 1137
Psp124BI GAGCTC 1 cut(s) 279
Psp6I CCWGG 5 cut(s) 525, 715, 808, 1527, 1887
PspGI CCWGG 5 cut(s) 525, 715, 808, 1527, 1887
PspN4I GGNNCC 6 cut(s) 115, 348, 391, 628, 814, 1765
PspPI GGNCC 3 cut(s) 113, 346, 390
PstI CTGCAG 1 cut(s) 601
PsuI RGATCY 2 cut(s) 1383, 1831
PsyI GACNNNGTC 1 cut(s) 187
PteI GCGCGC 1 cut(s) 133
PvuII CAGCTG 2 cut(s) 863, 1445
SacI GAGCTC 1 cut(s) 279
SacII CCGCGG 2 cut(s) 144, 182
SaqAI TTAA 2 cut(s) 1734, 1869
SatI GCNGC 9 cut(s) 34, 179, 371, 864, 1443, 1572, 1575, 1718, 1965
Sau3AI GATC 8 cut(s) 409, 850, 1012, 1279, 1383, 1624, 1780, 1831
Sau96I GGNCC 3 cut(s) 113, 346, 390
SchI GAGTC 5 cut(s) 100, 230, 293, 431, 539
ScrFI CCNGG 5 cut(s) 527, 717, 810, 1529, 1889
SduI GDGCHC 7 cut(s) 279, 297, 631, 724, 1371, 1887, 1927
SexAI ACCWGGT 1 cut(s) 1887
SfaNI GCATC 3 cut(s) 132, 1638, 1660
SfcI CTRYAG 4 cut(s) 597, 690, 783, 894
Sfr303I CCGCGG 2 cut(s) 144, 182
SfuI TTCGAA 1 cut(s) 1484
SgrBI CCGCGG 2 cut(s) 144, 182
SinI GGWCC 2 cut(s) 113, 390
Sse9I AATT 9 cut(s) 15, 399, 1003, 1017, 1158, 1499, 1658, 1989, 1994
SspMI CTAG 3 cut(s) 1119, 1226, 1439
SstI GAGCTC 1 cut(s) 279
StyD4I CCNGG 5 cut(s) 525, 715, 808, 1527, 1887
StyI CCWWGG 1 cut(s) 342
TaaI ACNGT 4 cut(s) 609, 895, 1194, 1867
TaiI ACGT 6 cut(s) 62, 191, 288, 439, 1433, 1753
TaqI TCGA 4 cut(s) 224, 257, 474, 1484
TaqII GACCGA 1 cut(s) 101
TasI AATT 9 cut(s) 15, 399, 1003, 1017, 1158, 1499, 1658, 1989, 1994
TauI GCSGC 2 cut(s) 181, 1577
TfiI GAWTC 5 cut(s) 358, 560, 905, 1037, 1913
Tru1I TTAA 2 cut(s) 1734, 1869
Tru9I TTAA 2 cut(s) 1734, 1869
TscAI CASTG 1 cut(s) 1197
TseFI GTSAC 2 cut(s) 916, 1751
TseI GCWGC 7 cut(s) 33, 370, 863, 1442, 1571, 1717, 1964
Tsp45I GTSAC 2 cut(s) 916, 1751
TspDTI ATGAA 3 cut(s) 57, 491, 519
TspGWI ACGGA 2 cut(s) 280, 904
TspRI CASTG 1 cut(s) 1197
Tth111I GACNNNGTC 1 cut(s) 187
VneI GTGCAC 1 cut(s) 1923
VpaK11BI GGWCC 2 cut(s) 113, 390
XagI CCTNNNNNAGG 1 cut(s) 1292
XapI RAATTY 2 cut(s) 1017, 1994
XceI RCATGY 1 cut(s) 445
XmiI GTMKAC 1 cut(s) 886
XmnI GAANNNNTTC 1 cut(s) 1233
XspI CTAG 3 cut(s) 1119, 1226, 1439
ZraI GACGTC 1 cut(s) 189
Zsp2I ATGCAT 1 cut(s) 1653
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.