RchiOBHm_Chr2g0129591

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
45236459 .. 45236986
528 bp
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UTR
Exon/CDS
Intron
PRQ50122

Sequence Viewer

Length: 189 bp
ATGACCTTTGAAGCTGGGAAGTATTTTTCCAAGAAGGCCTTCCTCATTGTTTCCCATGAAGTAATACGTCCAGCAGGAATCTCATATAGCCAATCTTTGGCTCTGTCAGCTAAGGAGAATGGAAATGCCTTCATCTTCAGAATGTTTTCATCAGCTCCTTGTGGTTGCATGTTTGCACACACAGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

62

Amino Acids

6.81

Weight (kDa)

8.74

Isoelectric Point (pI)

27.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 97
AcuI CTGAAG 1 cut(s) 121
AfiI CCNNNNNNNGG 1 cut(s) 97
AgsI TTSAA 1 cut(s) 11
AjuI GAANNNNNNNTTGG 2 cut(s) 23, 55
AluBI AGCT 3 cut(s) 14, 110, 155
AluI AGCT 3 cut(s) 14, 110, 155
AoxI GGCC 1 cut(s) 36
Asp700I GAANNNNTTC 2 cut(s) 38, 145
Bpu10I CCTNAGC 1 cut(s) 111
Bsc4I CCNNNNNNNGG 1 cut(s) 97
BseLI CCNNNNNNNGG 1 cut(s) 97
BseYI CCCAGC 1 cut(s) 14
BshFI GGCC 1 cut(s) 38
BslI CCNNNNNNNGG 1 cut(s) 97
BsnI GGCC 1 cut(s) 38
BspANI GGCC 1 cut(s) 38
BstDEI CTNAG 1 cut(s) 111
BstMWI GCNNNNNNNGC 1 cut(s) 107
BstNSI RCATGY 1 cut(s) 172
BsuRI GGCC 1 cut(s) 38
CviAII CATG 2 cut(s) 56, 169
CviJI RGCY 6 cut(s) 14, 38, 90, 101, 110, 155
CviKI_1 RGCY 6 cut(s) 14, 38, 90, 101, 110, 155
DdeI CTNAG 1 cut(s) 111
Eco147I AGGCCT 1 cut(s) 38
Eco57I CTGAAG 1 cut(s) 121
FaeI CATG 2 cut(s) 59, 172
FaiI YATR 4 cut(s) 57, 85, 87, 170
FalI AAGNNNNNCTT 2 cut(s) 23, 55
FatI CATG 2 cut(s) 55, 168
GsaI CCCAGC 1 cut(s) 18
HaeIII GGCC 1 cut(s) 38
Hin1II CATG 2 cut(s) 59, 172
HinfI GANTC 1 cut(s) 78
Hpy188I TCNGA 1 cut(s) 140
HpyAV CCTTC 3 cut(s) 28, 49, 139
HpyCH4IV ACGT 1 cut(s) 67
HpyCH4V TGCA 2 cut(s) 168, 176
HpyF10VI GCNNNNNNNGC 1 cut(s) 107
HpyF3I CTNAG 1 cut(s) 111
HpySE526I ACGT 1 cut(s) 67
Hsp92II CATG 2 cut(s) 59, 172
LmnI GCTCC 1 cut(s) 160
LpnPI CCDG 2 cut(s) 60, 84
MaeII ACGT 1 cut(s) 67
MboII GAAGA 1 cut(s) 127
MnlI CCTC 1 cut(s) 53
MroXI GAANNNNTTC 2 cut(s) 38, 145
MwoI GCNNNNNNNGC 1 cut(s) 107
NlaIII CATG 2 cut(s) 59, 172
NspI RCATGY 1 cut(s) 172
PceI AGGCCT 1 cut(s) 38
PdmI GAANNNNTTC 2 cut(s) 38, 145
PfeI GAWTC 1 cut(s) 78
PflMI CCANNNNNTGG 1 cut(s) 97
PspFI CCCAGC 1 cut(s) 14
SetI ASST 5 cut(s) 8, 16, 70, 112, 157
SgeI CNNG 7 cut(s) 27, 43, 68, 83, 87, 171, 181
SseBI AGGCCT 1 cut(s) 38
StuI AGGCCT 1 cut(s) 38
TaiI ACGT 1 cut(s) 70
TfiI GAWTC 1 cut(s) 78
TspDTI ATGAA 3 cut(s) 72, 121, 138
Van91I CCANNNNNTGG 1 cut(s) 97
XceI RCATGY 1 cut(s) 172
XmnI GAANNNNTTC 2 cut(s) 38, 145
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.