RchiOBHm_Chr5g0027221

Type I inositol 1,4,5-trisphosphate 5-phosphatase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
21234291 .. 21234571
281 bp
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UTR
Exon/CDS
Intron
PRQ30677

Sequence Viewer

Length: 204 bp
ATGATATTTATTGGTTCAGATCCGCCTTCTTTTGGCTATCAGTTAAGACATAGGAGAGGAAAATCAGAAACTACTCGTGCTCAGTACATAAACACAAAGGATGTGAGGTTTGTCTATGTTTTTCTACCTCTTGCAATGCTAGGCCTAGAAGTAGCACCAGTTTGGTTCTTAATGGAATTTCCTGGGGCACATTGTTTCAGGTAG

Protein Analysis

67

Amino Acids

7.81

Weight (kDa)

9.51

Isoelectric Point (pI)

34.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000652)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 23
AclWI GGATC 1 cut(s) 14
AcsI RAATTY 1 cut(s) 176
AfaI GTAC 1 cut(s) 86
AfiI CCNNNNNNNGG 1 cut(s) 32
AjnI CCWGG 1 cut(s) 181
Alw21I GWGCWC 1 cut(s) 82
AlwI GGATC 1 cut(s) 14
AoxI GGCC 1 cut(s) 142
ApoI RAATTY 1 cut(s) 176
BaeGI GKGCMC 1 cut(s) 190
BauI CACGAG 1 cut(s) 75
Bbv12I GWGCWC 1 cut(s) 82
BciT130I CCWGG 1 cut(s) 183
BfaI CTAG 2 cut(s) 140, 146
Bme1390I CCNGG 1 cut(s) 183
BmrFI CCNGG 1 cut(s) 183
BsaJI CCNNGG 1 cut(s) 182
Bsc4I CCNNNNNNNGG 1 cut(s) 32
Bse1I ACTGG 1 cut(s) 158
Bse3DI GCAATG 1 cut(s) 141
BseBI CCWGG 1 cut(s) 183
BseDI CCNNGG 1 cut(s) 182
BseGI GGATG 1 cut(s) 106
BseLI CCNNNNNNNGG 1 cut(s) 32
BseMI GCAATG 1 cut(s) 141
BseMII CTCAG 1 cut(s) 95
BseNI ACTGG 1 cut(s) 158
BseSI GKGCMC 1 cut(s) 190
BshFI GGCC 1 cut(s) 144
BsiHKAI GWGCWC 1 cut(s) 82
BslI CCNNNNNNNGG 1 cut(s) 32
BsnI GGCC 1 cut(s) 144
Bsp1286I GDGCHC 2 cut(s) 82, 190
Bsp143I GATC 1 cut(s) 19
BspACI CCGC 1 cut(s) 23
BspANI GGCC 1 cut(s) 144
BspCNI CTCAG 1 cut(s) 94
BspPI GGATC 1 cut(s) 14
BsrDI GCAATG 1 cut(s) 141
BsrI ACTGG 1 cut(s) 158
BssECI CCNNGG 1 cut(s) 182
BssMI GATC 1 cut(s) 19
BssSI CACGAG 1 cut(s) 75
Bst2BI CACGAG 1 cut(s) 75
Bst2UI CCWGG 1 cut(s) 183
BstDEI CTNAG 1 cut(s) 81
BstF5I GGATG 1 cut(s) 106
BstKTI GATC 1 cut(s) 22
BstMBI GATC 1 cut(s) 19
BstNI CCWGG 1 cut(s) 183
BstSCI CCNGG 1 cut(s) 181
BstSLI GKGCMC 1 cut(s) 190
BstX2I RGATCY 1 cut(s) 19
BstYI RGATCY 1 cut(s) 19
BsuRI GGCC 1 cut(s) 144
BtsCI GGATG 1 cut(s) 106
Csp6I GTAC 1 cut(s) 85
CviJI RGCY 2 cut(s) 36, 144
CviKI_1 RGCY 2 cut(s) 36, 144
CviQI GTAC 1 cut(s) 85
DdeI CTNAG 1 cut(s) 81
DpnI GATC 1 cut(s) 21
DpnII GATC 1 cut(s) 19
EciI GGCGGA 1 cut(s) 12
Eco147I AGGCCT 1 cut(s) 144
EcoRII CCWGG 1 cut(s) 181
FaiI YATR 3 cut(s) 51, 89, 117
FokI GGATG 1 cut(s) 113
FspBI CTAG 2 cut(s) 140, 146
HaeIII GGCC 1 cut(s) 144
Hpy188I TCNGA 2 cut(s) 19, 67
HpyAV CCTTC 1 cut(s) 36
HpyCH4V TGCA 1 cut(s) 134
HpyF3I CTNAG 1 cut(s) 81
Kzo9I GATC 1 cut(s) 19
LpnPI CCDG 4 cut(s) 168, 171, 184, 195
MaeI CTAG 2 cut(s) 140, 146
MalI GATC 1 cut(s) 21
MboI GATC 1 cut(s) 19
MflI RGATCY 1 cut(s) 19
MhlI GDGCHC 2 cut(s) 82, 190
MluCI AATT 1 cut(s) 176
MnlI CCTC 3 cut(s) 50, 99, 138
MseI TTAA 2 cut(s) 44, 170
MspR9I CCNGG 1 cut(s) 183
MvaI CCWGG 1 cut(s) 183
NdeII GATC 1 cut(s) 19
PceI AGGCCT 1 cut(s) 144
Psp6I CCWGG 1 cut(s) 181
PspGI CCWGG 1 cut(s) 181
PsuI RGATCY 1 cut(s) 19
RsaI GTAC 1 cut(s) 86
RsaNI GTAC 1 cut(s) 85
SaqAI TTAA 2 cut(s) 44, 170
Sau3AI GATC 1 cut(s) 19
ScrFI CCNGG 1 cut(s) 183
SduI GDGCHC 2 cut(s) 82, 190
SetI ASST 3 cut(s) 110, 130, 203
SgeI CNNG 8 cut(s) 87, 89, 143, 152, 158, 170, 194, 195
Sse9I AATT 1 cut(s) 176
SseBI AGGCCT 1 cut(s) 144
SsiI CCGC 1 cut(s) 23
SspMI CTAG 2 cut(s) 140, 146
StuI AGGCCT 1 cut(s) 144
StyD4I CCNGG 1 cut(s) 181
TasI AATT 1 cut(s) 176
TatI WGTACW 1 cut(s) 84
Tru1I TTAA 2 cut(s) 44, 170
Tru9I TTAA 2 cut(s) 44, 170
XapI RAATTY 1 cut(s) 176
XspI CTAG 2 cut(s) 140, 146
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.