Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 131 |
| Acc36I | ACCTGC | 2 cut(s) | 131, 171 |
| AciI | CCGC | 2 cut(s) | 244, 304 |
| AclWI | GGATC | 1 cut(s) | 295 |
| AcoI | YGGCCR | 1 cut(s) | 42 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 313 |
| AluBI | AGCT | 3 cut(s) | 88, 220, 276 |
| AluI | AGCT | 3 cut(s) | 88, 220, 276 |
| AlwI | GGATC | 1 cut(s) | 295 |
| AoxI | GGCC | 1 cut(s) | 42 |
| ApeKI | GCWGC | 2 cut(s) | 164, 267 |
| BbsI | GAAGAC | 1 cut(s) | 239 |
| BbvI | GCAGC | 2 cut(s) | 151, 279 |
| BccI | CCATC | 1 cut(s) | 39 |
| BfaI | CTAG | 1 cut(s) | 35 |
| BfuAI | ACCTGC | 2 cut(s) | 131, 171 |
| BisI | GCNGC | 2 cut(s) | 165, 268 |
| BlsI | GCNGC | 2 cut(s) | 166, 269 |
| BmiI | GGNNCC | 1 cut(s) | 29 |
| BmsI | GCATC | 4 cut(s) | 122, 182, 279, 289 |
| BpiI | GAAGAC | 1 cut(s) | 239 |
| BsaJI | CCNNGG | 1 cut(s) | 23 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 102, 129, 132, 159 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 313 |
| BseDI | CCNNGG | 1 cut(s) | 23 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 313 |
| BseXI | GCAGC | 2 cut(s) | 151, 279 |
| BshFI | GGCC | 1 cut(s) | 44 |
| BslFI | GGGAC | 1 cut(s) | 86 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 313 |
| BsmFI | GGGAC | 1 cut(s) | 86 |
| BsnI | GGCC | 1 cut(s) | 44 |
| Bsp143I | GATC | 1 cut(s) | 300 |
| BspACI | CCGC | 2 cut(s) | 244, 304 |
| BspANI | GGCC | 1 cut(s) | 44 |
| BspLI | GGNNCC | 1 cut(s) | 29 |
| BspMI | ACCTGC | 2 cut(s) | 131, 171 |
| BspPI | GGATC | 1 cut(s) | 295 |
| BssECI | CCNNGG | 1 cut(s) | 23 |
| BssMI | GATC | 1 cut(s) | 300 |
| BssT1I | CCWWGG | 1 cut(s) | 23 |
| Bst4CI | ACNGT | 1 cut(s) | 238 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 119 |
| BstC8I | GCNNGC | 3 cut(s) | 244, 248, 278 |
| BstDEI | CTNAG | 1 cut(s) | 297 |
| BstKTI | GATC | 1 cut(s) | 303 |
| BstMBI | GATC | 1 cut(s) | 300 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 85, 119, 273 |
| BstV1I | GCAGC | 2 cut(s) | 151, 279 |
| BstV2I | GAAGAC | 1 cut(s) | 239 |
| BstX2I | RGATCY | 1 cut(s) | 300 |
| BstYI | RGATCY | 1 cut(s) | 300 |
| BsuRI | GGCC | 1 cut(s) | 44 |
| BveI | ACCTGC | 2 cut(s) | 131, 171 |
| Cac8I | GCNNGC | 3 cut(s) | 244, 248, 278 |
| CviAII | CATG | 1 cut(s) | 284 |
| CviJI | RGCY | 7 cut(s) | 28, 44, 88, 164, 220, 276, 317 |
| CviKI_1 | RGCY | 7 cut(s) | 28, 44, 88, 164, 220, 276, 317 |
| DdeI | CTNAG | 1 cut(s) | 297 |
| DpnI | GATC | 1 cut(s) | 302 |
| DpnII | GATC | 1 cut(s) | 300 |
| EaeI | YGGCCR | 1 cut(s) | 42 |
| EciI | GGCGGA | 1 cut(s) | 293 |
| Eco130I | CCWWGG | 1 cut(s) | 23 |
| EcoT14I | CCWWGG | 1 cut(s) | 23 |
| EcoT22I | ATGCAT | 1 cut(s) | 197 |
| ErhI | CCWWGG | 1 cut(s) | 23 |
| FaeI | CATG | 1 cut(s) | 287 |
| FaiI | YATR | 4 cut(s) | 99, 132, 257, 285 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 209, 241 |
| FaqI | GGGAC | 1 cut(s) | 86 |
| FatI | CATG | 1 cut(s) | 283 |
| FauI | CCCGC | 1 cut(s) | 251 |
| Fnu4HI | GCNGC | 2 cut(s) | 165, 268 |
| Fsp4HI | GCNGC | 2 cut(s) | 165, 268 |
| FspBI | CTAG | 1 cut(s) | 35 |
| GluI | GCNGC | 2 cut(s) | 165, 268 |
| HaeIII | GGCC | 1 cut(s) | 44 |
| Hin1II | CATG | 1 cut(s) | 287 |
| HinfI | GANTC | 1 cut(s) | 212 |
| Hpy188I | TCNGA | 2 cut(s) | 83, 152 |
| HpyAV | CCTTC | 1 cut(s) | 317 |
| HpyCH4III | ACNGT | 1 cut(s) | 238 |
| HpyCH4V | TGCA | 4 cut(s) | 134, 180, 195, 287 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 85, 119, 273 |
| HpyF3I | CTNAG | 1 cut(s) | 297 |
| Hsp92II | CATG | 1 cut(s) | 287 |
| Kzo9I | GATC | 1 cut(s) | 300 |
| LmnI | GCTCC | 4 cut(s) | 33, 84, 110, 137 |
| LpnPI | CCDG | 6 cut(s) | 89, 120, 126, 166, 260, 262 |
| Lsp1109I | GCAGC | 2 cut(s) | 151, 279 |
| LweI | GCATC | 4 cut(s) | 122, 182, 279, 289 |
| MaeI | CTAG | 1 cut(s) | 35 |
| MalI | GATC | 1 cut(s) | 302 |
| MboI | GATC | 1 cut(s) | 300 |
| MboII | GAAGA | 1 cut(s) | 244 |
| MflI | RGATCY | 1 cut(s) | 300 |
| MluCI | AATT | 2 cut(s) | 11, 50 |
| MnlI | CCTC | 1 cut(s) | 114 |
| Mph1103I | ATGCAT | 1 cut(s) | 197 |
| MseI | TTAA | 3 cut(s) | 53, 204, 325 |
| MspA1I | CMGCKG | 1 cut(s) | 276 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 85, 119, 273 |
| NdeII | GATC | 1 cut(s) | 300 |
| NlaIII | CATG | 1 cut(s) | 287 |
| NlaIV | GGNNCC | 1 cut(s) | 29 |
| NsiI | ATGCAT | 1 cut(s) | 197 |
| PaqCI | CACCTGC | 1 cut(s) | 131 |
| PfeI | GAWTC | 1 cut(s) | 212 |
| PkrI | GCNGC | 2 cut(s) | 166, 269 |
| PspN4I | GGNNCC | 1 cut(s) | 29 |
| PsuI | RGATCY | 1 cut(s) | 300 |
| PvuII | CAGCTG | 1 cut(s) | 276 |
| SaqAI | TTAA | 3 cut(s) | 53, 204, 325 |
| SatI | GCNGC | 2 cut(s) | 165, 268 |
| Sau3AI | GATC | 1 cut(s) | 300 |
| SetI | ASST | 6 cut(s) | 90, 98, 145, 185, 222, 278 |
| SfaNI | GCATC | 4 cut(s) | 122, 182, 279, 289 |
| Sse9I | AATT | 2 cut(s) | 11, 50 |
| SsiI | CCGC | 2 cut(s) | 244, 304 |
| SspMI | CTAG | 1 cut(s) | 35 |
| StyI | CCWWGG | 1 cut(s) | 23 |
| TaaI | ACNGT | 1 cut(s) | 238 |
| TasI | AATT | 2 cut(s) | 11, 50 |
| TfiI | GAWTC | 1 cut(s) | 212 |
| Tru1I | TTAA | 3 cut(s) | 53, 204, 325 |
| Tru9I | TTAA | 3 cut(s) | 53, 204, 325 |
| TseI | GCWGC | 2 cut(s) | 164, 267 |
| XspI | CTAG | 1 cut(s) | 35 |
| Zsp2I | ATGCAT | 1 cut(s) | 197 |