Rorug07G0105200

Type I inositol 1,4,5-trisphosphate 5-phosphatase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
8257580 .. 8262746
5167 bp
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UTR
Exon/CDS
Intron
Rorug07G0105200.1

Sequence Viewer

Length: 1584 bp
ATGGAGAAGAGGATCCAGGGTGCTAGCCTATTATTAGATGCCAGCCTGGGACATTGTTTTGTAGATGGACTGGAACATCGAGATGCAAATGCAATTTACAATTGCTTAAGGGCATATGCTGCCATTGATAATACTAGGAGTGCAGAAGAACTTTTCCGAACAACCATTGTGGCCCCATTAATACAAAAAGTTATTCCGCATGGTACATCATGGGCGGATGGAAAGCCATCTGGAGATGAACTTGAGAATGATTATCAGCAAATTAAGCAATGCATTCAGAAAGACTGCAAATTTTTGTTGGAAATTTCTTTTGAAGAAAATTCTGGTTTGCACGTGTTCGACTTCTTGGCAAACTCAATTCTCAAAGAGGTTCTTTCAGCAATCCAAAAGGGAAAACCTGGTGCTTTTTCTCCTGGACGACCAACAGAATTTTTGAAAAATTATAAATCAAGCCTAGAGTTCTTGGCTCATCTAGAAGGCTACTTTCCGTCCAGAGCAGCTGTTAGTAAATTTCGAGCAGAAGCCGTTTATAATGAGTTCATGAAGCAATGGAACCTTGGGGTTTATTTCTCTTTGAGGTTTCAGGAGATTGCGGGTGCTCTAGATTCTGTACTTGCGGCGACTAGTCTTGTCCCTGTTCATAATATACCTTCTGGTCAAGGAGATTCTCCAGACTTGACATTAAAACAAAGTGCTACTTTGTTAGAGTGCTTGGAATCCTGTTGGAGAGAAGACGTTGTTGTTCTTTCTTATTCTGACAAGTTTCTTCGCTTATCCTTGCAGCTTCTTTCAAGATACTCAAGTTGGTTGTCATCTGGACTAGCTGCTCGGAAGAGGGGTAATACCAGCTCCAATCCTGGCTGTGAATGGGCTATTTCAACTGTACCAGATGAATTTATTTATATTATTCATGACATCAATTGTCTTCACACAAGGGTTTGTGGTGACTTTCTCGAACATGTACTTGAGCTTCTTTCATCATGTTCTGGCGATATACTTGATCATGTAAAACAGAGCATTTTACACGGAGGAAAAGCATTGGATGCATTAGTACCTGCCATTATCAACACTATTGTGGAGACTCTGGTTGAGAAGTCTGTCGAGGACTTGAGGCAGCTAAAGGGAATAACAGCAACGTACAGGATGACTAATAAACCTCTTCCTGTCAGACACTCACCATATGTGTCGGGAGTATTACGTCCCCTGAAGGTCTTTTTGGATGGGGAGCGAGCTTCAAGGTACCTGAAAGAAGATGCTAAGAATGAACTTGTGCTTAGTGCTGCGACTGAGATTACTGGTCGTTATTATGAGTTAGCTGCTGATCTCGTCAGTGTGGCTAGGAGAACAGAGACTTCACTCCAGAGAATAAGGCAAGGTGCACAAAGAAGAGGTGGAGCAAACGCAGATGTCTTGGATCACAATGTGTCCGACACTGACAAGATTTGCATGCAATTATTCCTAGACATTCAGGAGTACGGCCGTAACCTGGCAGTCCTTGGTGTAGATGCTGCCAATATCAAATCGTACCGCTCATTGTGGGAATGTGTTGCTCCTGCAGACAGGCGAAGTGTGATTAATTTCTAG

Protein Analysis

527

Amino Acids

58.67

Weight (kDa)

6.05

Isoelectric Point (pI)

41.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
COG2_C PF12022 182 - 489 3.2e-99 COG complex component, COG2, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000652)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 444, 531
Acc36I ACCTGC 1 cut(s) 1063
Acc65I GGTACC 1 cut(s) 1239
AccB1I GGYRCC 1 cut(s) 1239
AccBSI CCGCTC 1 cut(s) 1530
AciI CCGC 5 cut(s) 197, 215, 593, 617, 1528
AclWI GGATC 3 cut(s) 7, 20, 1422
AcoI YGGCCR 1 cut(s) 1477
AcsI RAATTY 6 cut(s) 290, 303, 319, 428, 509, 893
AcuI CTGAAG 1 cut(s) 1226
AcvI CACGTG 1 cut(s) 334
AdeI CACNNNGTG 1 cut(s) 1423
AfaI GTAC 9 cut(s) 205, 612, 885, 963, 1053, 1139, 1241, 1475, 1526
AfiI CCNNNNNNNGG 1 cut(s) 1486
AflII CTTAAG 1 cut(s) 106
AflIII ACRYGT 2 cut(s) 333, 958
AgsI TTSAA 5 cut(s) 314, 436, 792, 879, 1236
AhlI ACTAGT 1 cut(s) 623
AjnI CCWGG 6 cut(s) 15, 45, 397, 412, 856, 1485
AjuI GAANNNNNNNTTGG 2 cut(s) 1199, 1231
AleI CACNNNNGTG 1 cut(s) 1073
AluBI AGCT 8 cut(s) 500, 784, 824, 849, 970, 1117, 1232, 1316
AluI AGCT 8 cut(s) 500, 784, 824, 849, 970, 1117, 1232, 1316
Alw21I GWGCWC 2 cut(s) 601, 1381
Alw26I GTCTC 2 cut(s) 1073, 1343
Alw44I GTGCAC 1 cut(s) 1377
AlwI GGATC 3 cut(s) 7, 20, 1422
AoxI GGCC 2 cut(s) 171, 1477
ApaLI GTGCAC 1 cut(s) 1377
ApeKI GCWGC 8 cut(s) 119, 497, 781, 824, 1114, 1280, 1316, 1508
ApoI RAATTY 6 cut(s) 290, 303, 319, 428, 509, 893
AseI ATTAAT 2 cut(s) 179, 1575
Asp718I GGTACC 1 cut(s) 1239
AspS9I GGNCC 1 cut(s) 172
AsuHPI GGTGA 2 cut(s) 956, 1167
AsuNHI GCTAGC 1 cut(s) 23
BaeGI GKGCMC 1 cut(s) 1381
BaeI ACNNNNGTAYC 2 cut(s) 787, 820
BamHI GGATCC 1 cut(s) 12
BanI GGYRCC 1 cut(s) 1239
BarI GAAGNNNNNNTAC 2 cut(s) 954, 986
BbrPI CACGTG 1 cut(s) 334
BbsI GAAGAC 2 cut(s) 738, 917
Bbv12I GWGCWC 2 cut(s) 601, 1381
BbvI GCAGC 8 cut(s) 106, 509, 793, 811, 1126, 1267, 1303, 1495
BccI CCATC 4 cut(s) 59, 212, 235, 1214
BceAI ACGGC 3 cut(s) 509, 1464, 1492
BciT130I CCWGG 6 cut(s) 17, 47, 399, 414, 858, 1487
BclI TGATCA 1 cut(s) 1000
BcoDI GTCTC 2 cut(s) 1073, 1343
BcuI ACTAGT 1 cut(s) 623
BfmI CTRYAG 1 cut(s) 1554
BfrI CTTAAG 1 cut(s) 106
BfuAI ACCTGC 1 cut(s) 1063
BisI GCNGC 9 cut(s) 120, 498, 618, 782, 825, 1115, 1281, 1317, 1509
BlsI GCNGC 9 cut(s) 121, 499, 619, 783, 826, 1116, 1282, 1318, 1510
Bme1390I CCNGG 6 cut(s) 17, 47, 399, 414, 858, 1487
BmgT120I GGNCC 1 cut(s) 172
BmiI GGNNCC 4 cut(s) 14, 174, 554, 1241
BmrFI CCNGG 6 cut(s) 17, 47, 399, 414, 858, 1487
BmsI GCATC 5 cut(s) 28, 73, 1033, 1243, 1495
BmtI GCTAGC 1 cut(s) 27
BpiI GAAGAC 2 cut(s) 738, 917
BpmI CTGGAG 3 cut(s) 252, 654, 1343
BpuEI CTTGAG 4 cut(s) 263, 784, 986, 1129
BsaAI YACGTR 1 cut(s) 334
BsaJI CCNNGG 4 cut(s) 16, 46, 556, 1495
Bsc4I CCNNNNNNNGG 1 cut(s) 1486
Bse1I ACTGG 2 cut(s) 75, 1300
Bse3DI GCAATG 2 cut(s) 275, 554
BseBI CCWGG 6 cut(s) 17, 47, 399, 414, 858, 1487
BseDI CCNNGG 4 cut(s) 16, 46, 556, 1495
BseGI GGATG 4 cut(s) 223, 1048, 1149, 1225
BseLI CCNNNNNNNGG 1 cut(s) 1486
BseMI GCAATG 2 cut(s) 275, 554
BseMII CTCAG 1 cut(s) 1278
BseNI ACTGG 2 cut(s) 75, 1300
BseSI GKGCMC 1 cut(s) 1381
BseX3I CGGCCG 1 cut(s) 1477
BseXI GCAGC 8 cut(s) 106, 509, 793, 811, 1126, 1267, 1303, 1495
BsgI GTGCAG 1 cut(s) 162
Bsh1285I CGRYCG 1 cut(s) 1480
BshFI GGCC 2 cut(s) 173, 1479
BshNI GGYRCC 1 cut(s) 1239
BsiEI CGRYCG 1 cut(s) 1480
BsiHKAI GWGCWC 2 cut(s) 601, 1381
BslFI GGGAC 3 cut(s) 63, 617, 1185
BslI CCNNNNNNNGG 1 cut(s) 1486
BsmAI GTCTC 2 cut(s) 1073, 1343
BsmFI GGGAC 3 cut(s) 63, 617, 1185
BsmI GAATGC 1 cut(s) 273
BsnI GGCC 2 cut(s) 173, 1479
Bsp1286I GDGCHC 2 cut(s) 601, 1381
Bsp143I GATC 4 cut(s) 12, 1000, 1321, 1414
BspACI CCGC 5 cut(s) 197, 215, 593, 617, 1528
BspANI GGCC 2 cut(s) 173, 1479
BspCNI CTCAG 1 cut(s) 1279
BspHI TCATGA 2 cut(s) 540, 910
BspLI GGNNCC 4 cut(s) 14, 174, 554, 1241
BspMAI CTGCAG 1 cut(s) 1558
BspMI ACCTGC 1 cut(s) 1063
BspOI GCTAGC 1 cut(s) 27
BspPI GGATC 3 cut(s) 7, 20, 1422
BspT107I GGYRCC 1 cut(s) 1239
BspTI CTTAAG 1 cut(s) 106
BsrBI CCGCTC 1 cut(s) 1530
BsrDI GCAATG 2 cut(s) 275, 554
BsrI ACTGG 2 cut(s) 75, 1300
BssECI CCNNGG 4 cut(s) 16, 46, 556, 1495
BssMI GATC 4 cut(s) 12, 1000, 1321, 1414
BssT1I CCWWGG 2 cut(s) 556, 1495
Bst2UI CCWGG 6 cut(s) 17, 47, 399, 414, 858, 1487
Bst4CI ACNGT 1 cut(s) 883
Bst6I CTCTTC 4 cut(s) 2, 827, 1164, 1381
BstAFI CTTAAG 1 cut(s) 106
BstAPI GCANNNNNTGC 2 cut(s) 119, 1043
BstBAI YACGTR 1 cut(s) 334
BstC8I GCNNGC 4 cut(s) 25, 43, 1230, 1448
BstDEI CTNAG 3 cut(s) 1257, 1274, 1287
BstF5I GGATG 4 cut(s) 223, 1048, 1149, 1225
BstKTI GATC 4 cut(s) 15, 1003, 1324, 1417
BstMAI GTCTC 2 cut(s) 1073, 1343
BstMBI GATC 4 cut(s) 12, 1000, 1321, 1414
BstMCI CGRYCG 1 cut(s) 1480
BstMWI GCNNNNNNNGC 3 cut(s) 119, 265, 1043
BstNI CCWGG 6 cut(s) 17, 47, 399, 414, 858, 1487
BstNSI RCATGY 2 cut(s) 962, 1450
BstSCI CCNGG 6 cut(s) 15, 45, 397, 412, 856, 1485
BstSFI CTRYAG 1 cut(s) 1554
BstSLI GKGCMC 1 cut(s) 1381
BstV1I GCAGC 8 cut(s) 106, 509, 793, 811, 1126, 1267, 1303, 1495
BstV2I GAAGAC 2 cut(s) 738, 917
BstX2I RGATCY 1 cut(s) 12
BstYI RGATCY 1 cut(s) 12
BstZI CGGCCG 1 cut(s) 1477
BsuRI GGCC 2 cut(s) 173, 1479
BtsCI GGATG 4 cut(s) 223, 1048, 1149, 1225
BtsIMutI CAGTG 2 cut(s) 1336, 1431
BveI ACCTGC 1 cut(s) 1063
Cac8I GCNNGC 4 cut(s) 25, 43, 1230, 1448
CciI TCATGA 2 cut(s) 540, 910
Cfr13I GGNCC 1 cut(s) 172
CsiI ACCWGGT 1 cut(s) 397
Csp6I GTAC 9 cut(s) 204, 611, 884, 962, 1052, 1138, 1240, 1474, 1525
CspCI CAANNNNNGTGG 2 cut(s) 150, 185
CviAII CATG 8 cut(s) 200, 210, 541, 911, 959, 981, 1004, 1447
CviQI GTAC 9 cut(s) 204, 611, 884, 962, 1052, 1138, 1240, 1474, 1525
DdeI CTNAG 3 cut(s) 1257, 1274, 1287
DpnI GATC 4 cut(s) 14, 1002, 1323, 1416
DpnII GATC 4 cut(s) 12, 1000, 1321, 1414
DraIII CACNNNGTG 1 cut(s) 1423
EaeI YGGCCR 1 cut(s) 1477
EagI CGGCCG 1 cut(s) 1477
Eam1104I CTCTTC 4 cut(s) 2, 827, 1164, 1381
EarI CTCTTC 4 cut(s) 2, 827, 1164, 1381
EciI GGCGGA 1 cut(s) 230
EclXI CGGCCG 1 cut(s) 1477
Eco130I CCWWGG 2 cut(s) 556, 1495
Eco52I CGGCCG 1 cut(s) 1477
Eco57I CTGAAG 1 cut(s) 1226
Eco72I CACGTG 1 cut(s) 334
EcoRII CCWGG 6 cut(s) 15, 45, 397, 412, 856, 1485
EcoT14I CCWWGG 2 cut(s) 556, 1495
EcoT22I ATGCAT 2 cut(s) 275, 1048
ErhI CCWWGG 2 cut(s) 556, 1495
FaeI CATG 8 cut(s) 203, 213, 544, 914, 962, 984, 1007, 1450
FalI AAGNNNNNCTT 4 cut(s) 357, 389, 682, 714
FaqI GGGAC 3 cut(s) 63, 617, 1185
FatI CATG 8 cut(s) 199, 209, 540, 910, 958, 980, 1003, 1446
FauI CCCGC 1 cut(s) 586
FauNDI CATATG 2 cut(s) 115, 1180
FbaI TGATCA 1 cut(s) 1000
Fnu4HI GCNGC 9 cut(s) 120, 498, 618, 782, 825, 1115, 1281, 1317, 1509
FokI GGATG 4 cut(s) 230, 1055, 1156, 1232
Fsp4HI GCNGC 9 cut(s) 120, 498, 618, 782, 825, 1115, 1281, 1317, 1509
GluI GCNGC 9 cut(s) 120, 498, 618, 782, 825, 1115, 1281, 1317, 1509
GsuI CTGGAG 3 cut(s) 252, 654, 1343
HaeIII GGCC 2 cut(s) 173, 1479
Hin1II CATG 8 cut(s) 203, 213, 544, 914, 962, 984, 1007, 1450
HinfI GANTC 4 cut(s) 605, 665, 716, 1081
HphI GGTGA 2 cut(s) 956, 1167
Hpy166II GTNNAC 1 cut(s) 1379
Hpy188I TCNGA 6 cut(s) 158, 279, 757, 831, 1169, 1429
Hpy8I GTNNAC 1 cut(s) 1379
HpyAV CCTTC 3 cut(s) 470, 660, 1201
HpyCH4III ACNGT 1 cut(s) 883
HpyCH4IV ACGT 4 cut(s) 333, 735, 1136, 1198
HpyF10VI GCNNNNNNNGC 3 cut(s) 119, 265, 1043
HpyF3I CTNAG 3 cut(s) 1257, 1274, 1287
HpySE526I ACGT 4 cut(s) 333, 735, 1136, 1198
Hsp92II CATG 8 cut(s) 203, 213, 544, 914, 962, 984, 1007, 1450
KpnI GGTACC 1 cut(s) 1243
Ksp22I TGATCA 1 cut(s) 1000
Kzo9I GATC 4 cut(s) 12, 1000, 1321, 1414
LmnI GCTCC 4 cut(s) 854, 1225, 1394, 1555
Lsp1109I GCAGC 8 cut(s) 106, 509, 793, 811, 1126, 1267, 1303, 1495
LweI GCATC 5 cut(s) 28, 73, 1033, 1243, 1495
MabI ACCWGGT 1 cut(s) 397
MaeII ACGT 4 cut(s) 333, 735, 1136, 1198
MaeIII GTNAC 2 cut(s) 944, 1481
MalI GATC 4 cut(s) 14, 1002, 1323, 1416
MbiI CCGCTC 1 cut(s) 1530
MboI GATC 4 cut(s) 12, 1000, 1321, 1414
MfeI CAATTG 2 cut(s) 100, 919
MflI RGATCY 1 cut(s) 12
MhlI GDGCHC 2 cut(s) 601, 1381
MlyI GAGTC 1 cut(s) 1075
MmeI TCCRAC 3 cut(s) 279, 704, 1452
MnlI CCTC 9 cut(s) 3, 361, 570, 828, 1022, 1096, 1104, 1167, 1382
Mph1103I ATGCAT 2 cut(s) 275, 1048
MseI TTAA 5 cut(s) 107, 179, 264, 683, 1575
MslI CAYNNNNRTG 2 cut(s) 81, 1073
MspA1I CMGCKG 1 cut(s) 500
MspCI CTTAAG 1 cut(s) 106
MspR9I CCNGG 6 cut(s) 17, 47, 399, 414, 858, 1487
MunI CAATTG 2 cut(s) 100, 919
Mva1269I GAATGC 1 cut(s) 273
MvaI CCWGG 6 cut(s) 17, 47, 399, 414, 858, 1487
MwoI GCNNNNNNNGC 3 cut(s) 119, 265, 1043
NdeI CATATG 2 cut(s) 115, 1180
NdeII GATC 4 cut(s) 12, 1000, 1321, 1414
NheI GCTAGC 1 cut(s) 23
NlaIII CATG 8 cut(s) 203, 213, 544, 914, 962, 984, 1007, 1450
NlaIV GGNNCC 4 cut(s) 14, 174, 554, 1241
NmuCI GTSAC 1 cut(s) 944
NsiI ATGCAT 2 cut(s) 275, 1048
NspI RCATGY 2 cut(s) 962, 1450
OliI CACNNNNGTG 1 cut(s) 1073
PaeI GCATGC 1 cut(s) 1450
PagI TCATGA 2 cut(s) 540, 910
PciI ACATGT 1 cut(s) 958
PctI GAATGC 1 cut(s) 273
PfeI GAWTC 3 cut(s) 605, 665, 716
PfoI TCCNGGA 1 cut(s) 412
PkrI GCNGC 9 cut(s) 121, 499, 619, 783, 826, 1116, 1282, 1318, 1510
PleI GAGTC 1 cut(s) 1075
PmaCI CACGTG 1 cut(s) 334
PmlI CACGTG 1 cut(s) 334
PpsI GAGTC 1 cut(s) 1075
Ppu21I YACGTR 1 cut(s) 334
PscI ACATGT 1 cut(s) 958
PshBI ATTAAT 2 cut(s) 179, 1575
PsiI TTATAA 2 cut(s) 444, 531
Psp6I CCWGG 6 cut(s) 15, 45, 397, 412, 856, 1485
PspCI CACGTG 1 cut(s) 334
PspGI CCWGG 6 cut(s) 15, 45, 397, 412, 856, 1485
PspN4I GGNNCC 4 cut(s) 14, 174, 554, 1241
PspPI GGNCC 1 cut(s) 172
PstI CTGCAG 1 cut(s) 1558
PsuI RGATCY 1 cut(s) 12
PvuII CAGCTG 1 cut(s) 500
RsaI GTAC 9 cut(s) 205, 612, 885, 963, 1053, 1139, 1241, 1475, 1526
RsaNI GTAC 9 cut(s) 204, 611, 884, 962, 1052, 1138, 1240, 1474, 1525
RseI CAYNNNNRTG 2 cut(s) 81, 1073
SaqAI TTAA 5 cut(s) 107, 179, 264, 683, 1575
SatI GCNGC 9 cut(s) 120, 498, 618, 782, 825, 1115, 1281, 1317, 1509
Sau3AI GATC 4 cut(s) 12, 1000, 1321, 1414
Sau96I GGNCC 1 cut(s) 172
SchI GAGTC 1 cut(s) 1075
ScrFI CCNGG 6 cut(s) 17, 47, 399, 414, 858, 1487
SduI GDGCHC 2 cut(s) 601, 1381
SexAI ACCWGGT 1 cut(s) 397
SfaNI GCATC 5 cut(s) 28, 73, 1033, 1243, 1495
SfcI CTRYAG 1 cut(s) 1554
SmiMI CAYNNNNRTG 2 cut(s) 81, 1073
SmlI CTYRAG 5 cut(s) 106, 242, 799, 965, 1108
SmoI CTYRAG 5 cut(s) 106, 242, 799, 965, 1108
SpeI ACTAGT 1 cut(s) 623
SphI GCATGC 1 cut(s) 1450
SsiI CCGC 5 cut(s) 197, 215, 593, 617, 1528
StyD4I CCNGG 6 cut(s) 15, 45, 397, 412, 856, 1485
StyI CCWWGG 2 cut(s) 556, 1495
TaaI ACNGT 1 cut(s) 883
TaiI ACGT 4 cut(s) 336, 738, 1139, 1201
TaqI TCGA 5 cut(s) 79, 339, 514, 954, 1101
TatI WGTACW 2 cut(s) 610, 961
TauI GCSGC 1 cut(s) 620
TfiI GAWTC 3 cut(s) 605, 665, 716
Tru1I TTAA 5 cut(s) 107, 179, 264, 683, 1575
Tru9I TTAA 5 cut(s) 107, 179, 264, 683, 1575
TscAI CASTG 2 cut(s) 1336, 1438
TseFI GTSAC 1 cut(s) 944
TseI GCWGC 8 cut(s) 119, 497, 781, 824, 1114, 1280, 1316, 1508
Tsp45I GTSAC 1 cut(s) 944
TspDTI ATGAA 8 cut(s) 252, 529, 557, 629, 899, 906, 966, 1278
TspGWI ACGGA 2 cut(s) 477, 1041
TspRI CASTG 2 cut(s) 1336, 1438
Vha464I CTTAAG 1 cut(s) 106
VneI GTGCAC 1 cut(s) 1377
VspI ATTAAT 2 cut(s) 179, 1575
XapI RAATTY 6 cut(s) 290, 303, 319, 428, 509, 893
XbaI TCTAGA 2 cut(s) 472, 601
XceI RCATGY 2 cut(s) 962, 1450
Zsp2I ATGCAT 2 cut(s) 275, 1048
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.