Rorug05G0306800

Type I inositol 1,4,5-trisphosphate 5-phosphatase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
35885621 .. 35889088
3468 bp
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UTR
Exon/CDS
Intron
Rorug05G0306800.1

Sequence Viewer

Length: 459 bp
ATGAAGCAGATGGTAGCTGATCAGTTCTATTACATTCTACATAAGCACTGCAGAAAAGTAGAAGTTAAACTTGTAAAATGCATTGTTCAAAGTATGATTGTAGATATATCCTTCAATCAGTTAGGAGGACTTTGTACACTACGCTTTCTTGAACAGGTTGATCACTATATTGGCAAAGATCATATTTTCAAACGCAGCATTATTTTGATAAAAGTGTTGTGCTACTATGAGAGTCGTATTCTTGGTGCTCATCATGGTTTATTTTCAACATATGCTTTGGGAACATTAGTCCTATATATATTCCATCTTTTTCATTCTTCTCTAGATGGGCCTTTAACGGTCCTCTACAGATTTTTGGATTACTTCAGCAAATTTGATTGGGAGAAATATTCTCTGAAGTACCAGATAATGGAGGGGATGATGTACTGCGAAGTGAAGAGTTTATTAGAAACTGTGTAG

Protein Analysis

152

Amino Acids

18.01

Weight (kDa)

8.53

Isoelectric Point (pI)

33.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAP-OAS1 PF26180 57 - 133 9.7e-43 PAP/OAS1 substrate-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000652)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 409
AcsI RAATTY 1 cut(s) 371
AcuI CTGAAG 2 cut(s) 349, 416
AfaI GTAC 3 cut(s) 136, 401, 425
AfiI CCNNNNNNNGG 1 cut(s) 409
AgsI TTSAA 5 cut(s) 89, 115, 152, 190, 267
AluBI AGCT 1 cut(s) 17
AluI AGCT 1 cut(s) 17
Alw21I GWGCWC 1 cut(s) 250
AoxI GGCC 1 cut(s) 329
ApeKI GCWGC 1 cut(s) 195
ApoI RAATTY 1 cut(s) 371
AspS9I GGNCC 2 cut(s) 329, 340
AvaII GGWCC 1 cut(s) 340
Bbv12I GWGCWC 1 cut(s) 250
BbvI GCAGC 1 cut(s) 207
BccI CCATC 3 cut(s) 4, 312, 320
BclI TGATCA 2 cut(s) 19, 160
BfaI CTAG 1 cut(s) 323
BfmI CTRYAG 2 cut(s) 49, 346
BisI GCNGC 1 cut(s) 196
BlsI GCNGC 1 cut(s) 197
Bme18I GGWCC 1 cut(s) 340
BmgT120I GGNCC 2 cut(s) 329, 340
Bsc4I CCNNNNNNNGG 1 cut(s) 409
BseGI GGATG 1 cut(s) 423
BseLI CCNNNNNNNGG 1 cut(s) 409
BseXI GCAGC 1 cut(s) 207
BshFI GGCC 1 cut(s) 331
BsiHKAI GWGCWC 1 cut(s) 250
BslI CCNNNNNNNGG 1 cut(s) 409
BsnI GGCC 1 cut(s) 331
Bsp1286I GDGCHC 1 cut(s) 250
Bsp1407I TGTACA 1 cut(s) 134
Bsp143I GATC 3 cut(s) 19, 160, 178
BspANI GGCC 1 cut(s) 331
BspMAI CTGCAG 1 cut(s) 53
BsrGI TGTACA 1 cut(s) 134
BssMI GATC 3 cut(s) 19, 160, 178
Bst4CI ACNGT 2 cut(s) 340, 454
Bst6I CTCTTC 1 cut(s) 431
BstAUI TGTACA 1 cut(s) 134
BstF5I GGATG 1 cut(s) 423
BstKTI GATC 3 cut(s) 22, 163, 181
BstMBI GATC 3 cut(s) 19, 160, 178
BstSFI CTRYAG 2 cut(s) 49, 346
BstV1I GCAGC 1 cut(s) 207
BsuRI GGCC 1 cut(s) 331
BtsCI GGATG 1 cut(s) 423
BtsI GCAGTG 1 cut(s) 46
BtsIMutI CAGTG 1 cut(s) 46
Cfr13I GGNCC 2 cut(s) 329, 340
Csp6I GTAC 3 cut(s) 135, 400, 424
CviAII CATG 1 cut(s) 254
CviJI RGCY 2 cut(s) 17, 331
CviKI_1 RGCY 2 cut(s) 17, 331
CviQI GTAC 3 cut(s) 135, 400, 424
DpnI GATC 3 cut(s) 21, 162, 180
DpnII GATC 3 cut(s) 19, 160, 178
Eam1104I CTCTTC 1 cut(s) 431
EarI CTCTTC 1 cut(s) 431
Eco47I GGWCC 1 cut(s) 340
Eco57I CTGAAG 2 cut(s) 349, 416
EcoT22I ATGCAT 1 cut(s) 83
FaeI CATG 1 cut(s) 257
FalI AAGNNNNNCTT 2 cut(s) 54, 86
FatI CATG 1 cut(s) 253
FauNDI CATATG 1 cut(s) 271
FbaI TGATCA 2 cut(s) 19, 160
Fnu4HI GCNGC 1 cut(s) 196
FokI GGATG 1 cut(s) 430
Fsp4HI GCNGC 1 cut(s) 196
FspBI CTAG 1 cut(s) 323
GluI GCNGC 1 cut(s) 196
HaeIII GGCC 1 cut(s) 331
Hin1II CATG 1 cut(s) 257
HinfI GANTC 1 cut(s) 232
Hpy166II GTNNAC 1 cut(s) 137
Hpy188I TCNGA 1 cut(s) 396
Hpy188III TCNNGA 2 cut(s) 149, 323
Hpy8I GTNNAC 1 cut(s) 137
HpyAV CCTTC 1 cut(s) 121
HpyCH4III ACNGT 2 cut(s) 340, 454
HpyCH4V TGCA 2 cut(s) 51, 81
Hsp92II CATG 1 cut(s) 257
Ksp22I TGATCA 2 cut(s) 19, 160
Kzo9I GATC 3 cut(s) 19, 160, 178
LpnPI CCDG 2 cut(s) 140, 416
Lsp1109I GCAGC 1 cut(s) 207
MaeI CTAG 1 cut(s) 323
MalI GATC 3 cut(s) 21, 162, 180
MboI GATC 3 cut(s) 19, 160, 178
MboII GAAGA 2 cut(s) 309, 448
MhlI GDGCHC 1 cut(s) 250
MluCI AATT 1 cut(s) 371
MlyI GAGTC 1 cut(s) 241
MnlI CCTC 3 cut(s) 119, 353, 406
Mph1103I ATGCAT 1 cut(s) 83
MseI TTAA 2 cut(s) 66, 335
NdeI CATATG 1 cut(s) 271
NdeII GATC 3 cut(s) 19, 160, 178
NlaIII CATG 1 cut(s) 257
NsiI ATGCAT 1 cut(s) 83
PflMI CCANNNNNTGG 1 cut(s) 409
PkrI GCNGC 1 cut(s) 197
PleI GAGTC 1 cut(s) 240
PpsI GAGTC 1 cut(s) 240
PspPI GGNCC 2 cut(s) 329, 340
PstI CTGCAG 1 cut(s) 53
RsaI GTAC 3 cut(s) 136, 401, 425
RsaNI GTAC 3 cut(s) 135, 400, 424
SaqAI TTAA 2 cut(s) 66, 335
SatI GCNGC 1 cut(s) 196
Sau3AI GATC 3 cut(s) 19, 160, 178
Sau96I GGNCC 2 cut(s) 329, 340
SchI GAGTC 1 cut(s) 241
SduI GDGCHC 1 cut(s) 250
SetI ASST 2 cut(s) 19, 159
SfcI CTRYAG 2 cut(s) 49, 346
SgeI CNNG 7 cut(s) 83, 161, 167, 254, 266, 335, 415
SinI GGWCC 1 cut(s) 340
Sse9I AATT 1 cut(s) 371
SspI AATATT 1 cut(s) 389
SspMI CTAG 1 cut(s) 323
TaaI ACNGT 2 cut(s) 340, 454
TasI AATT 1 cut(s) 371
TatI WGTACW 2 cut(s) 134, 423
Tru1I TTAA 2 cut(s) 66, 335
Tru9I TTAA 2 cut(s) 66, 335
TscAI CASTG 1 cut(s) 53
TseI GCWGC 1 cut(s) 195
TspDTI ATGAA 2 cut(s) 17, 302
TspRI CASTG 1 cut(s) 53
Van91I CCANNNNNTGG 1 cut(s) 409
VpaK11BI GGWCC 1 cut(s) 340
XapI RAATTY 1 cut(s) 371
XbaI TCTAGA 1 cut(s) 322
XspI CTAG 1 cut(s) 323
Zsp2I ATGCAT 1 cut(s) 83
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.