Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0000951

Physical Location & Seq

Genomic Coordinates Reverse (-)

32678476 .. 32683520

Gene Structure 5045 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000002356

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1296 bp

ATGAGACGTGTGTTCTCATGCACTAGCATTATGGGGAGACGTCATGGCGCCAACAAGATCTGCCAGTCATGCCTCAAGAACAGGTACACGATAACAGATGAGGTGGCGGCTTCAAATGATTGGAAGTGCCCCAGATGCTGTGGGAATTGCAACCGCAGTGTGTGCTTGAAGCGACAGGGCAAAGAACCTCGTAGTCGTAGTATGCTTGAACCCGAGAAGCCTTCAGACCAGAAGACGTTAAGGGCAAGCGGAAGTCCAAGGCTCCTAGAGCCCCGTAGAGTGAAAGCAAAGGAGGAAGTACTTAGGGTTGAACTGTCTCTACCTTTGGGGGTGCCCTTAACAACCGTTGCGGGCATTGCACTAGATCCTCAGGATGTTGGACATGCCCTACAATTTATAGAGTTCTGTGACGCCTTCCAAGAGGTTCTTGAGTTCAGCACAGCAGAAGCTGAATCTCTTCTTCGAGACCTGATGCGTCAAGAATACTCCTCAGTAGTTCTATTTCAAGCCAAACTCCTGTCTTTGATACATAAAAAGAAGATCGGAGAAGAGCATTCGGACGAAAATTCATGGTTAGAAGTTTTGAAAAACTACTTCTCCAAGTCTCAATTCCGACTAAGGGTATTGCCCACAGATGTGTTTAGTAGAGAAGTTGACGGATACGACTCTTTGCACTTCCCCTTGAAGCTTAGAGTGCCGGTTCAAAACAAAATATTCAATTTCTCCTCAAAAAAAAAAAAAAAAAACAAAATATCCAATTTTTCTAAAAAGAAAACAGAATATCCAGTTGATGACGGGTCGTCTCCAATCGGGTCGGAGTCTTATCGGACTCCGTCTCCGTTTAATCGGAGCAATTCGTCGATTTGCTTCCGACCGCGCAGAGCTGCTGCCCCTGCCCTAAAATCCCAACCCGGATTTCTCGATGACGTGGCCGTCAATCTCAGTAGGGTTCTTAAAGATGGTTGGTTAAATGGAGCAGCTGTACTTGGGGTTCCAGTAAAAGCGACCATCAAAGAGGCAAACTATGAGTCTTTTGTAGTCCGAACTCTGGACAGGAGAACACTTTGGGAAATGCAGACACCACAGGTCATCAAACCTGACTTGCTCAAAAAGGGCTTTGAACTTGTTAACAGAGAAGGCCTTGAAGTTACTGATGACGTGTCTATTGTTGAGCACCTTCCACATCCTGTGTACATCACTGAAGGATCTTACACCAACATCAAGGTCACAACGCCAGATGATTTATTACTCGCAGAAAGAATATTGAGTATGGACACTAAAAAATCTTCAGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006081 GO:0006082 GO:0006090 GO:0006629 GO:0006644 GO:0006720 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0008654 GO:0009058 GO:0009240 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0016740 GO:0016772 GO:0016779 GO:0019288 GO:0019637 GO:0019682 GO:0019752 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046490 GO:0050518 GO:0070567 GO:0071704 GO:0090407 GO:1901135 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00900 ko01100 ko01110 ko01130 map00900 map01100 map01110 map01130

Pfam Domains

Protein Families

IspD

Protein Analysis

432

Amino Acids

48.71

Weight (kDa)

9.29

Isoelectric Point (pI)

48.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-4CXXC_R1	PF10497	17 - 65	3.1e-10	Zinc-finger domain of monoamine-oxidase A repressor R1
IspD	PF01128	324 - 423	3.5e-27	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000951)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g33461 FvH4_6g41810 FvH4_6g41910 FvH4_6g41910
malus_domestica	MD08G1211400.v1.1
rosa_laevigata	RLG00000001363 RLG00000002321 RLG00000002324 RLG00000002337 RLG00000002348 RLG00000002351 RLG00000002356 RLG00000015133 RLG00000015138 RLG00000021019 RLG00000023283
rosa_multiflora	Rmu_sc0001301.1_g000012 Rmu_sc0001539.1_g000006 Rmu_sc0039105.1_g000001
rosa_roxburghii	Rroxscaffold_3G00240210 Rroxscaffold_3G00240480 Rroxscaffold_4G00310990
rosa_rugosa	Rorug02G0463400 Rorug07G0177300 Rorug07G0290300 Rorug07G0290400 Rorug07G0290500 Rorug07G0290600
rosa_samantha	Rh1BG149400 Rh1DG181200 Rh2AG528900 Rh2BG283600 Rh2BG542800 Rh2BG542900 Rh2CG513200 Rh2DG280000 Rh2DG551800 Rh7AG275500 Rh7AG317300 Rh7AG320700 Rh7AG321400 Rh7AG324200 Rh7AG324800 Rh7AG325400 Rh7AG326300 Rh7AG326400 Rh7BG312800 Rh7BG316000 Rh7BG316100 Rh7BG316200 Rh7BG316800 Rh7BG342200 Rh7CG294300 Rh7CG334100 Rh7CG337500 Rh7CG337900 Rh7CG341600 Rh7CG342500 Rh7CG343300 Rh7CG343500 Rh7CG358900 Rh7DG282400
rosa_wichuraiana	Rw2G043730 Rw7G028380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	932
AatII	GACGTC	1 cut(s)	43
AccB1I	GGYRCC	2 cut(s)	47, 331
AccII	CGCG	1 cut(s)	877
AciI	CCGC	5 cut(s)	107, 154, 249, 350, 875
AclWI	GGATC	2 cut(s)	359, 1213
AcoI	YGGCCR	1 cut(s)	930
AcsI	RAATTY	1 cut(s)	565
AcuI	CTGAAG	3 cut(s)	207, 1221, 1272
AcyI	GRCGYC	3 cut(s)	40, 48, 411
AfaI	GTAC	4 cut(s)	86, 300, 984, 1193
AfiI	CCNNNNNNNGG	2 cut(s)	619, 1048
AflIII	ACRYGT	2 cut(s)	7, 1158
AhdI	GACNNNNNGTC	1 cut(s)	799
AjiI	CACGTC	3 cut(s)	8, 928, 1159
AjuI	GAANNNNNNNTTGG	4 cut(s)	593, 625, 900, 932
AleI	CACNNNNGTG	1 cut(s)	635
AluBI	AGCT	4 cut(s)	449, 688, 884, 980
AluI	AGCT	4 cut(s)	449, 688, 884, 980
Alw21I	GWGCWC	1 cut(s)	1176
Alw26I	GTCTC	6 cut(s)	31, 321, 459, 609, 807, 840
AlwI	GGATC	2 cut(s)	359, 1213
AlwNI	CAGNNNCTG	2 cut(s)	138, 449
Ama87I	CYCGRG	1 cut(s)	212
AoxI	GGCC	2 cut(s)	930, 1138
ApeKI	GCWGC	3 cut(s)	884, 887, 977
ApoI	RAATTY	1 cut(s)	565
ArsI	GACNNNNNNTTYG	2 cut(s)	1013, 1045
Asp700I	GAANNNNTTC	1 cut(s)	456
AspLEI	GCGC	2 cut(s)	50, 879
AsuC2I	CCSGG	1 cut(s)	912
AvaI	CYCGRG	1 cut(s)	212
AxyI	CCTNAGG	1 cut(s)	369
BaeGI	GKGCMC	2 cut(s)	131, 336
BanI	GGYRCC	2 cut(s)	47, 331
BanII	GRGCYC	1 cut(s)	273
BbsI	GAAGAC	1 cut(s)	239
Bbv12I	GWGCWC	1 cut(s)	1176
BbvI	GCAGC	3 cut(s)	871, 874, 989
BccI	CCATC	2 cut(s)	953, 1016
BceAI	ACGGC	1 cut(s)	917
BciVI	GTATCC	1 cut(s)	653
BcnI	CCSGG	1 cut(s)	912
BcoDI	GTCTC	6 cut(s)	31, 321, 459, 609, 807, 840
BfaI	CTAG	3 cut(s)	24, 266, 362
BfoI	RGCGCY	1 cut(s)	51
BfuI	GTATCC	1 cut(s)	653
BglII	AGATCT	1 cut(s)	57
BisI	GCNGC	4 cut(s)	108, 885, 888, 978
BlsI	GCNGC	4 cut(s)	109, 886, 889, 979
BmcAI	AGTACT	1 cut(s)	300
Bme1390I	CCNGG	1 cut(s)	912
BmeRI	GACNNNNNGTC	1 cut(s)	799
BmeT110I	CYCGRG	1 cut(s)	212
BmgBI	CACGTC	3 cut(s)	8, 928, 1159
BmiI	GGNNCC	4 cut(s)	49, 263, 333, 993
BmrFI	CCNGG	1 cut(s)	912
BmsI	GCATC	2 cut(s)	125, 462
BpiI	GAAGAC	1 cut(s)	239
BpuEI	CTTGAG	2 cut(s)	59, 449
BpuMI	CCSGG	1 cut(s)	912
BsaHI	GRCGYC	3 cut(s)	40, 48, 411
BsaI	GGTCTC	1 cut(s)	459
BsaJI	CCNNGG	1 cut(s)	257
BsaXI	ACNNNNNCTCC	6 cut(s)	581, 611, 820, 850, 966, 996
Bsc4I	CCNNNNNNNGG	2 cut(s)	619, 1048
Bse118I	RCCGGY	1 cut(s)	697
Bse1I	ACTGG	3 cut(s)	64, 785, 995
Bse21I	CCTNAGG	1 cut(s)	369
Bse3DI	GCAATG	1 cut(s)	354
BseDI	CCNNGG	1 cut(s)	257
BseGI	GGATG	2 cut(s)	379, 1183
BseLI	CCNNNNNNNGG	2 cut(s)	619, 1048
BseMI	GCAATG	1 cut(s)	354
BseMII	CTCAG	3 cut(s)	383, 504, 955
BseNI	ACTGG	3 cut(s)	64, 785, 995
BseRI	GAGGAG	2 cut(s)	478, 715
BseSI	GKGCMC	2 cut(s)	131, 336
BseXI	GCAGC	3 cut(s)	871, 874, 989
Bsh1236I	CGCG	1 cut(s)	877
Bsh1285I	CGRYCG	1 cut(s)	875
BshFI	GGCC	2 cut(s)	932, 1140
BshNI	GGYRCC	2 cut(s)	47, 331
BsiEI	CGRYCG	1 cut(s)	875
BsiHKAI	GWGCWC	1 cut(s)	1176
BsiHKCI	CYCGRG	1 cut(s)	212
BsiSI	CCGG	2 cut(s)	698, 912
BslI	CCNNNNNNNGG	2 cut(s)	619, 1048
BsmAI	GTCTC	6 cut(s)	31, 321, 459, 609, 807, 840
BsmBI	CGTCTC	3 cut(s)	31, 807, 840
BsmI	GAATGC	1 cut(s)	553
BsnI	GGCC	2 cut(s)	932, 1140
Bso31I	GGTCTC	1 cut(s)	459
BsoBI	CYCGRG	1 cut(s)	212
Bsp1286I	GDGCHC	4 cut(s)	131, 273, 336, 1176
Bsp1407I	TGTACA	1 cut(s)	1191
Bsp143I	GATC	4 cut(s)	57, 364, 540, 1205
BspACI	CCGC	5 cut(s)	107, 154, 249, 350, 875
BspANI	GGCC	2 cut(s)	932, 1140
BspCNI	CTCAG	3 cut(s)	382, 503, 954
BspFNI	CGCG	1 cut(s)	877
BspLI	GGNNCC	4 cut(s)	49, 263, 333, 993
BspPI	GGATC	2 cut(s)	359, 1213
BspQI	GCTCTTC	1 cut(s)	543
BspT107I	GGYRCC	2 cut(s)	47, 331
BspTNI	GGTCTC	1 cut(s)	459
BsrDI	GCAATG	1 cut(s)	354
BsrFI	RCCGGY	1 cut(s)	697
BsrGI	TGTACA	1 cut(s)	1191
BsrI	ACTGG	3 cut(s)	64, 785, 995
BssAI	RCCGGY	1 cut(s)	697
BssECI	CCNNGG	1 cut(s)	257
BssMI	GATC	4 cut(s)	57, 364, 540, 1205
BssNI	GRCGYC	3 cut(s)	40, 48, 411
BssT1I	CCWWGG	1 cut(s)	257
Bst4CI	ACNGT	2 cut(s)	315, 346
Bst6I	CTCTTC	2 cut(s)	462, 543
BstACI	GRCGYC	3 cut(s)	40, 48, 411
BstAPI	GCANNNNNTGC	1 cut(s)	162
BstAUI	TGTACA	1 cut(s)	1191
BstC8I	GCNNGC	2 cut(s)	247, 352
BstDEI	CTNAG	6 cut(s)	302, 369, 490, 617, 689, 941
BstF5I	GGATG	2 cut(s)	379, 1183
BstFNI	CGCG	1 cut(s)	877
BstH2I	RGCGCY	1 cut(s)	51
BstHHI	GCGC	2 cut(s)	50, 879
BstKTI	GATC	4 cut(s)	60, 367, 543, 1208
BstMAI	GTCTC	6 cut(s)	31, 321, 459, 609, 807, 840
BstMBI	GATC	4 cut(s)	57, 364, 540, 1205
BstMCI	CGRYCG	1 cut(s)	875
BstMWI	GCNNNNNNNGC	7 cut(s)	69, 135, 162, 268, 356, 694, 893
BstNSI	RCATGY	1 cut(s)	386
BstSCI	CCNGG	1 cut(s)	910
BstSLI	GKGCMC	2 cut(s)	131, 336
BstUI	CGCG	1 cut(s)	877
BstV1I	GCAGC	3 cut(s)	871, 874, 989
BstV2I	GAAGAC	1 cut(s)	239
BstX2I	RGATCY	3 cut(s)	57, 364, 1205
BstYI	RGATCY	3 cut(s)	57, 364, 1205
Bsu36I	CCTNAGG	1 cut(s)	369
BsuI	GTATCC	1 cut(s)	653
BsuRI	GGCC	2 cut(s)	932, 1140
BtrI	CACGTC	3 cut(s)	8, 928, 1159
BtsCI	GGATG	2 cut(s)	379, 1183
BtsI	GCAGTG	1 cut(s)	163
BtsIMutI	CAGTG	2 cut(s)	163, 1197
Cac8I	GCNNGC	2 cut(s)	247, 352
CaiI	CAGNNNCTG	2 cut(s)	138, 449
CfoI	GCGC	2 cut(s)	50, 879
Cfr10I	RCCGGY	1 cut(s)	697
CseI	GACGC	2 cut(s)	419, 464
Csp6I	GTAC	4 cut(s)	85, 299, 983, 1192
CviAII	CATG	5 cut(s)	18, 44, 69, 383, 570
CviQI	GTAC	4 cut(s)	85, 299, 983, 1192
DdeI	CTNAG	6 cut(s)	302, 369, 490, 617, 689, 941
DinI	GGCGCC	1 cut(s)	49
DpnI	GATC	4 cut(s)	59, 366, 542, 1207
DpnII	GATC	4 cut(s)	57, 364, 540, 1205
DrdI	GACNNNNNNGTC	1 cut(s)	932
DriI	GACNNNNNGTC	1 cut(s)	799
DseDI	GACNNNNNNGTC	1 cut(s)	932
EaeI	YGGCCR	1 cut(s)	930
Eam1104I	CTCTTC	2 cut(s)	462, 543
Eam1105I	GACNNNNNGTC	1 cut(s)	799
EarI	CTCTTC	2 cut(s)	462, 543
Eco130I	CCWWGG	1 cut(s)	257
Eco147I	AGGCCT	1 cut(s)	1140
Eco24I	GRGCYC	1 cut(s)	273
Eco31I	GGTCTC	1 cut(s)	459
Eco57I	CTGAAG	3 cut(s)	207, 1221, 1272
Eco81I	CCTNAGG	1 cut(s)	369
Eco88I	CYCGRG	1 cut(s)	212
EcoT14I	CCWWGG	1 cut(s)	257
EcoT38I	GRGCYC	1 cut(s)	273
EgeI	GGCGCC	1 cut(s)	49
EheI	GGCGCC	1 cut(s)	49
ErhI	CCWWGG	1 cut(s)	257
Esp3I	CGTCTC	3 cut(s)	31, 807, 840
FaeI	CATG	5 cut(s)	21, 47, 72, 386, 573
FalI	AAGNNNNNCTT	2 cut(s)	411, 443
FatI	CATG	5 cut(s)	17, 43, 68, 382, 569
FauI	CCCGC	1 cut(s)	343
Fnu4HI	GCNGC	4 cut(s)	108, 885, 888, 978
FokI	GGATG	2 cut(s)	386, 1170
FriOI	GRGCYC	1 cut(s)	273
Fsp4HI	GCNGC	4 cut(s)	108, 885, 888, 978
FspBI	CTAG	3 cut(s)	24, 266, 362
GlaI	GCGC	2 cut(s)	49, 878
GluI	GCNGC	4 cut(s)	108, 885, 888, 978
HaeII	RGCGCY	1 cut(s)	51
HaeIII	GGCC	2 cut(s)	932, 1140
HapII	CCGG	2 cut(s)	698, 912
HgaI	GACGC	2 cut(s)	419, 464
HhaI	GCGC	2 cut(s)	50, 879
Hin1I	GRCGYC	3 cut(s)	40, 48, 411
Hin1II	CATG	5 cut(s)	21, 47, 72, 386, 573
Hin6I	GCGC	2 cut(s)	48, 877
HinP1I	GCGC	2 cut(s)	48, 877
HincII	GTYRAC	2 cut(s)	655, 1129
HindII	GTYRAC	2 cut(s)	655, 1129
HindIII	AAGCTT	1 cut(s)	686
HinfI	GANTC	5 cut(s)	452, 665, 818, 829, 1028
HpaI	GTTAAC	1 cut(s)	1129
HpaII	CCGG	2 cut(s)	698, 912
Hpy166II	GTNNAC	4 cut(s)	87, 655, 1129, 1192
Hpy188I	TCNGA	9 cut(s)	226, 545, 559, 614, 817, 828, 849, 872, 1043
Hpy188III	TCNNGA	8 cut(s)	76, 371, 428, 464, 479, 920, 1049, 1290
Hpy8I	GTNNAC	4 cut(s)	87, 655, 1129, 1192
Hpy99I	CGWCG	1 cut(s)	862
HpyAV	CCTTC	5 cut(s)	231, 424, 1130, 1187, 1196
HpyCH4III	ACNGT	2 cut(s)	315, 346
HpyCH4IV	ACGT	5 cut(s)	7, 40, 236, 927, 1158
HpyCH4V	TGCA	5 cut(s)	21, 150, 359, 673, 1075
HpyF10VI	GCNNNNNNNGC	7 cut(s)	69, 135, 162, 268, 356, 694, 893
HpyF3I	CTNAG	6 cut(s)	302, 369, 490, 617, 689, 941
HpySE526I	ACGT	5 cut(s)	7, 40, 236, 927, 1158
Hsp92I	GRCGYC	3 cut(s)	40, 48, 411
Hsp92II	CATG	5 cut(s)	21, 47, 72, 386, 573
HspAI	GCGC	2 cut(s)	48, 877
KasI	GGCGCC	1 cut(s)	47
KspAI	GTTAAC	1 cut(s)	1129
Kzo9I	GATC	4 cut(s)	57, 364, 540, 1205
LguI	GCTCTTC	1 cut(s)	543
LmnI	GCTCC	3 cut(s)	267, 849, 974
Lsp1109I	GCAGC	3 cut(s)	871, 874, 989
LweI	GCATC	2 cut(s)	125, 462
MaeI	CTAG	3 cut(s)	24, 266, 362
MaeII	ACGT	5 cut(s)	7, 40, 236, 927, 1158
MaeIII	GTNAC	3 cut(s)	407, 1147, 1225
MalI	GATC	4 cut(s)	59, 366, 542, 1207
MboI	GATC	4 cut(s)	57, 364, 540, 1205
MboII	GAAGA	6 cut(s)	244, 449, 452, 550, 560, 1278
MflI	RGATCY	3 cut(s)	57, 364, 1205
MhlI	GDGCHC	4 cut(s)	131, 273, 336, 1176
MluCI	AATT	7 cut(s)	145, 392, 565, 608, 718, 757, 853
Mly113I	GGCGCC	1 cut(s)	48
MlyI	GAGTC	4 cut(s)	659, 823, 827, 1037
MmeI	TCCRAC	4 cut(s)	358, 637, 795, 895
MnlI	CCTC	9 cut(s)	83, 94, 198, 286, 378, 415, 499, 736, 1009
MroXI	GAANNNNTTC	1 cut(s)	456
MseI	TTAA	6 cut(s)	239, 338, 843, 954, 968, 1128
MslI	CAYNNNNRTG	1 cut(s)	635
MspA1I	CMGCKG	1 cut(s)	980
MspI	CCGG	2 cut(s)	698, 912
MspR9I	CCNGG	1 cut(s)	912
Mva1269I	GAATGC	1 cut(s)	553
MvnI	CGCG	1 cut(s)	877
MwoI	GCNNNNNNNGC	7 cut(s)	69, 135, 162, 268, 356, 694, 893
NarI	GGCGCC	1 cut(s)	48
NciI	CCSGG	1 cut(s)	912
NdeII	GATC	4 cut(s)	57, 364, 540, 1205
NlaIII	CATG	5 cut(s)	21, 47, 72, 386, 573
NlaIV	GGNNCC	4 cut(s)	49, 263, 333, 993
NmuCI	GTSAC	2 cut(s)	407, 1225
NspI	RCATGY	1 cut(s)	386
OliI	CACNNNNGTG	1 cut(s)	635
PceI	AGGCCT	1 cut(s)	1140
PciSI	GCTCTTC	1 cut(s)	543
PctI	GAATGC	1 cut(s)	553
PdmI	GAANNNNTTC	1 cut(s)	456
PfeI	GAWTC	1 cut(s)	452
PflFI	GACNNNGTC	1 cut(s)	832
PkrI	GCNGC	4 cut(s)	109, 886, 889, 979
PleI	GAGTC	4 cut(s)	659, 823, 826, 1036
PluTI	GGCGCC	1 cut(s)	51
PpsI	GAGTC	4 cut(s)	659, 823, 826, 1036
PspN4I	GGNNCC	4 cut(s)	49, 263, 333, 993
PsrI	GAACNNNNNNTAC	4 cut(s)	303, 335, 975, 1007
PstNI	CAGNNNCTG	2 cut(s)	138, 449
PsuI	RGATCY	3 cut(s)	57, 364, 1205
PsyI	GACNNNGTC	1 cut(s)	832
PvuII	CAGCTG	1 cut(s)	980
RsaI	GTAC	4 cut(s)	86, 300, 984, 1193
RsaNI	GTAC	4 cut(s)	85, 299, 983, 1192
RseI	CAYNNNNRTG	1 cut(s)	635
SapI	GCTCTTC	1 cut(s)	543
SaqAI	TTAA	6 cut(s)	239, 338, 843, 954, 968, 1128
SatI	GCNGC	4 cut(s)	108, 885, 888, 978
Sau3AI	GATC	4 cut(s)	57, 364, 540, 1205
ScaI	AGTACT	1 cut(s)	300
SchI	GAGTC	4 cut(s)	659, 823, 827, 1037
ScrFI	CCNGG	1 cut(s)	912
SduI	GDGCHC	4 cut(s)	131, 273, 336, 1176
SfaNI	GCATC	2 cut(s)	125, 462
SfoI	GGCGCC	1 cut(s)	49
SmiMI	CAYNNNNRTG	1 cut(s)	635
SmlI	CTYRAG	2 cut(s)	74, 428
SmoI	CTYRAG	2 cut(s)	74, 428
Sse9I	AATT	7 cut(s)	145, 392, 565, 608, 718, 757, 853
SseBI	AGGCCT	1 cut(s)	1140
SsiI	CCGC	5 cut(s)	107, 154, 249, 350, 875
SspDI	GGCGCC	1 cut(s)	47
SspI	AATATT	2 cut(s)	714, 1263
SspMI	CTAG	3 cut(s)	24, 266, 362
StuI	AGGCCT	1 cut(s)	1140
StyD4I	CCNGG	1 cut(s)	910
StyI	CCWWGG	1 cut(s)	257
TaaI	ACNGT	2 cut(s)	315, 346
TaiI	ACGT	5 cut(s)	10, 43, 239, 930, 1161
TaqI	TCGA	3 cut(s)	463, 860, 921
TasI	AATT	7 cut(s)	145, 392, 565, 608, 718, 757, 853
TatI	WGTACW	3 cut(s)	298, 982, 1191
TauI	GCSGC	1 cut(s)	110
TfiI	GAWTC	1 cut(s)	452
Tru1I	TTAA	6 cut(s)	239, 338, 843, 954, 968, 1128
Tru9I	TTAA	6 cut(s)	239, 338, 843, 954, 968, 1128
TscAI	CASTG	2 cut(s)	163, 1204
TseFI	GTSAC	2 cut(s)	407, 1225
TseI	GCWGC	3 cut(s)	884, 887, 977
Tsp45I	GTSAC	2 cut(s)	407, 1225
TspDTI	ATGAA	1 cut(s)	558
TspGWI	ACGGA	3 cut(s)	672, 822, 828
TspRI	CASTG	2 cut(s)	163, 1204
Tth111I	GACNNNGTC	1 cut(s)	832
XapI	RAATTY	1 cut(s)	565
XceI	RCATGY	1 cut(s)	386
XmnI	GAANNNNTTC	1 cut(s)	456
XspI	CTAG	3 cut(s)	24, 266, 362
ZraI	GACGTC	1 cut(s)	41
ZrmI	AGTACT	1 cut(s)	300

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.