Rh7CG341600

Ran-binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0000951
Physical Location & Seq
Reverse (-)
38276194 .. 38277521
1328 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG341600.1

Sequence Viewer

Length: 456 bp
ATGTCTTATTCTACATCTGGTGAGCAACATGATCACTTGGCTACTCCACCTCCACCACCCTTGGTATCGCCGCAATCCTCATCACCGATTTGTTTCCGATTGCCGCGCAGAGTCGCCTCAAAATCCAAAATGGGTTCTATCGATGACATCGCGGTTAATCTCAATAGGGTTCTTGCCCTATCTTGGCTAGACTCGGAGTTTGTGTTTGAGGCTCTGAGGAGAGAATGCCAAGAATTTGCGGAGGAGTTGCAGTGCCGCAAAATTTGCACTTTAATGTCTACGTGTAAAAATGCAACTATTTTGGGAACTCTGCCCAAGGACATCAAGGGTCCTTTATATCCTACCATTGCTGTACACAGCGAAAATGAGGAGTATGTGACATCTTTCTTGAATATTCAGCTGCTGTTCATCTATTTTGACTGGGCTATTGCTTCTGCATTTAACTCTCAGCTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CLTH SPRY

Protein Analysis

151

Amino Acids

16.96

Weight (kDa)

5.57

Isoelectric Point (pI)

67.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 278
AccII CGCG 2 cut(s) 106, 152
AciI CCGC 5 cut(s) 71, 104, 152, 239, 256
AcsI RAATTY 2 cut(s) 233, 261
AfaI GTAC 1 cut(s) 354
AfiI CCNNNNNNNGG 1 cut(s) 183
AflIII ACRYGT 1 cut(s) 281
AgsI TTSAA 1 cut(s) 391
AluBI AGCT 2 cut(s) 400, 451
AluI AGCT 2 cut(s) 400, 451
AlwNI CAGNNNCTG 1 cut(s) 403
ApeKI GCWGC 1 cut(s) 400
ApoI RAATTY 2 cut(s) 233, 261
ArsI GACNNNNNNTTYG 2 cut(s) 182, 214
AspLEI GCGC 1 cut(s) 108
AspS9I GGNCC 1 cut(s) 329
AsuHPI GGTGA 2 cut(s) 32, 75
AvaII GGWCC 1 cut(s) 329
BbvI GCAGC 1 cut(s) 387
BclI TGATCA 1 cut(s) 31
BfaI CTAG 1 cut(s) 188
BisI GCNGC 4 cut(s) 71, 104, 256, 401
BlsI GCNGC 4 cut(s) 72, 105, 257, 402
Bme18I GGWCC 1 cut(s) 329
BmgT120I GGNCC 1 cut(s) 329
BmiI GGNNCC 1 cut(s) 330
BmrI ACTGGG 1 cut(s) 430
BmuI ACTGGG 1 cut(s) 430
Bsa29I ATCGAT 1 cut(s) 141
BsaAI YACGTR 1 cut(s) 282
BsaJI CCNNGG 2 cut(s) 60, 315
BsaXI ACNNNNNCTCC 6 cut(s) 34, 64, 188, 218, 236, 266
Bsc4I CCNNNNNNNGG 1 cut(s) 183
Bse1I ACTGG 1 cut(s) 425
Bse3DI GCAATG 1 cut(s) 345
BseCI ATCGAT 1 cut(s) 141
BseDI CCNNGG 2 cut(s) 60, 315
BseLI CCNNNNNNNGG 1 cut(s) 183
BseMI GCAATG 1 cut(s) 345
BseMII CTCAG 1 cut(s) 206
BseNI ACTGG 1 cut(s) 425
BseRI GAGGAG 3 cut(s) 232, 257, 383
BseXI GCAGC 1 cut(s) 387
Bsh1236I CGCG 2 cut(s) 106, 152
BshVI ATCGAT 1 cut(s) 141
BslI CCNNNNNNNGG 1 cut(s) 183
BsmI GAATGC 1 cut(s) 230
Bsp1407I TGTACA 1 cut(s) 352
Bsp143I GATC 1 cut(s) 31
BspACI CCGC 5 cut(s) 71, 104, 152, 239, 256
BspCNI CTCAG 1 cut(s) 207
BspDI ATCGAT 1 cut(s) 141
BspFNI CGCG 2 cut(s) 106, 152
BspLI GGNNCC 1 cut(s) 330
BsrDI GCAATG 1 cut(s) 345
BsrGI TGTACA 1 cut(s) 352
BsrI ACTGG 1 cut(s) 425
BssECI CCNNGG 2 cut(s) 60, 315
BssMI GATC 1 cut(s) 31
BssT1I CCWWGG 2 cut(s) 60, 315
BstAPI GCANNNNNTGC 1 cut(s) 264
BstAUI TGTACA 1 cut(s) 352
BstBAI YACGTR 1 cut(s) 282
BstDEI CTNAG 2 cut(s) 215, 447
BstFNI CGCG 2 cut(s) 106, 152
BstHHI GCGC 1 cut(s) 108
BstKTI GATC 1 cut(s) 34
BstMBI GATC 1 cut(s) 31
BstMWI GCNNNNNNNGC 1 cut(s) 264
BstUI CGCG 2 cut(s) 106, 152
BstV1I GCAGC 1 cut(s) 387
Bsu15I ATCGAT 1 cut(s) 141
BsuTUI ATCGAT 1 cut(s) 141
BtgZI GCGATG 1 cut(s) 133
BtsI GCAGTG 1 cut(s) 257
BtsIMutI CAGTG 1 cut(s) 257
CaiI CAGNNNCTG 1 cut(s) 403
CfoI GCGC 1 cut(s) 108
Cfr13I GGNCC 1 cut(s) 329
ClaI ATCGAT 1 cut(s) 141
Csp6I GTAC 1 cut(s) 353
CspCI CAANNNNNGTGG 2 cut(s) 42, 77
CviAII CATG 1 cut(s) 29
CviJI RGCY 6 cut(s) 41, 187, 212, 400, 425, 451
CviKI_1 RGCY 6 cut(s) 41, 187, 212, 400, 425, 451
CviQI GTAC 1 cut(s) 353
DdeI CTNAG 2 cut(s) 215, 447
DpnI GATC 1 cut(s) 33
DpnII GATC 1 cut(s) 31
Eco130I CCWWGG 2 cut(s) 60, 315
Eco47I GGWCC 1 cut(s) 329
EcoO109I RGGNCCY 1 cut(s) 329
EcoT14I CCWWGG 2 cut(s) 60, 315
ErhI CCWWGG 2 cut(s) 60, 315
FaeI CATG 1 cut(s) 32
FaiI YATR 3 cut(s) 30, 337, 375
FatI CATG 1 cut(s) 28
FbaI TGATCA 1 cut(s) 31
FblI GTMKAC 1 cut(s) 278
Fnu4HI GCNGC 4 cut(s) 71, 104, 256, 401
Fsp4HI GCNGC 4 cut(s) 71, 104, 256, 401
FspBI CTAG 1 cut(s) 188
GlaI GCGC 1 cut(s) 107
GluI GCNGC 4 cut(s) 71, 104, 256, 401
HhaI GCGC 1 cut(s) 108
Hin1II CATG 1 cut(s) 32
Hin6I GCGC 1 cut(s) 106
HinP1I GCGC 1 cut(s) 106
HinfI GANTC 2 cut(s) 111, 191
HphI GGTGA 2 cut(s) 32, 75
Hpy166II GTNNAC 2 cut(s) 279, 355
Hpy188I TCNGA 3 cut(s) 98, 196, 216
Hpy188III TCNNGA 1 cut(s) 388
Hpy8I GTNNAC 2 cut(s) 279, 355
HpyCH4IV ACGT 1 cut(s) 281
HpyCH4V TGCA 4 cut(s) 250, 267, 293, 437
HpyF10VI GCNNNNNNNGC 1 cut(s) 264
HpyF3I CTNAG 2 cut(s) 215, 447
HpySE526I ACGT 1 cut(s) 281
Hsp92II CATG 1 cut(s) 32
HspAI GCGC 1 cut(s) 106
Ksp22I TGATCA 1 cut(s) 31
Kzo9I GATC 1 cut(s) 31
LpnPI CCDG 2 cut(s) 3, 406
Lsp1109I GCAGC 1 cut(s) 387
MaeI CTAG 1 cut(s) 188
MaeII ACGT 1 cut(s) 281
MaeIII GTNAC 1 cut(s) 376
MalI GATC 1 cut(s) 33
MboI GATC 1 cut(s) 31
MluCI AATT 2 cut(s) 233, 261
MlyI GAGTC 2 cut(s) 120, 185
MnlI CCTC 7 cut(s) 60, 88, 127, 202, 210, 235, 361
MseI TTAA 3 cut(s) 156, 272, 441
MslI CAYNNNNRTG 1 cut(s) 272
MspA1I CMGCKG 1 cut(s) 400
Mva1269I GAATGC 1 cut(s) 230
MvnI CGCG 2 cut(s) 106, 152
MwoI GCNNNNNNNGC 1 cut(s) 264
NdeII GATC 1 cut(s) 31
NlaIII CATG 1 cut(s) 32
NlaIV GGNNCC 1 cut(s) 330
NmuCI GTSAC 1 cut(s) 376
PctI GAATGC 1 cut(s) 230
PkrI GCNGC 4 cut(s) 72, 105, 257, 402
PleI GAGTC 2 cut(s) 119, 185
PpsI GAGTC 2 cut(s) 119, 185
Ppu21I YACGTR 1 cut(s) 282
PpuMI RGGWCCY 1 cut(s) 329
Psp5II RGGWCCY 1 cut(s) 329
PspN4I GGNNCC 1 cut(s) 330
PspPI GGNCC 1 cut(s) 329
PspPPI RGGWCCY 1 cut(s) 329
PstNI CAGNNNCTG 1 cut(s) 403
PvuII CAGCTG 1 cut(s) 400
RsaI GTAC 1 cut(s) 354
RsaNI GTAC 1 cut(s) 353
RseI CAYNNNNRTG 1 cut(s) 272
SaqAI TTAA 3 cut(s) 156, 272, 441
SatI GCNGC 4 cut(s) 71, 104, 256, 401
Sau3AI GATC 1 cut(s) 31
Sau96I GGNCC 1 cut(s) 329
SchI GAGTC 2 cut(s) 120, 185
SetI ASST 4 cut(s) 52, 284, 402, 453
SinI GGWCC 1 cut(s) 329
SmiMI CAYNNNNRTG 1 cut(s) 272
Sse9I AATT 2 cut(s) 233, 261
SsiI CCGC 5 cut(s) 71, 104, 152, 239, 256
SspI AATATT 1 cut(s) 394
SspMI CTAG 1 cut(s) 188
StyI CCWWGG 2 cut(s) 60, 315
TaiI ACGT 1 cut(s) 284
TaqI TCGA 1 cut(s) 141
TasI AATT 2 cut(s) 233, 261
TatI WGTACW 1 cut(s) 352
TauI GCSGC 3 cut(s) 73, 106, 258
Tru1I TTAA 3 cut(s) 156, 272, 441
Tru9I TTAA 3 cut(s) 156, 272, 441
TscAI CASTG 1 cut(s) 257
TseFI GTSAC 1 cut(s) 376
TseI GCWGC 1 cut(s) 400
Tsp45I GTSAC 1 cut(s) 376
TspDTI ATGAA 1 cut(s) 397
TspRI CASTG 1 cut(s) 257
VpaK11BI GGWCC 1 cut(s) 329
XapI RAATTY 2 cut(s) 233, 261
XmiI GTMKAC 1 cut(s) 278
XspI CTAG 1 cut(s) 188
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.