Rh7CG337500

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Reverse (-)
37695683 .. 37697910
2228 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG337500.1

Sequence Viewer

Length: 378 bp
ATGTCTCAACACGATCAATTGGCTACTCCACCTCCACCACCCCCGCAATCCTCATCGCCGATTTGTTTCCCATTGCCGCGCCGAGTCTCCTCCAAATCCAAAATCGGTTCTGTGGATGACATCGCGGTTGATCTCAATAGGGTTCTTGCCCTATCTTGGCTAGACTCGGAGTTTGTGCTTGAGGCTCTGAGGAGAGAACGCCAAGAATTTGCGGTGGAGTTGCAGCGCCGCAAAATTCGCACGTTAATGTCTATGCGGGTGCTAGGAAAGGCTCTGTTTCTCAGGTTTGGAATGCACAATAAAGCATGGGTTGCCTTTCCCAGAGGTTTCAACATTCAAAGACTGCAACTGATACAAGAATCAAAGTTTGAACTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

125

Amino Acids

14.41

Weight (kDa)

10.52

Isoelectric Point (pI)

80.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 79, 125
AciI CCGC 6 cut(s) 44, 77, 125, 212, 229, 256
AcsI RAATTY 2 cut(s) 206, 234
AfiI CCNNNNNNNGG 1 cut(s) 156
AgsI TTSAA 3 cut(s) 331, 338, 371
Alw26I GTCTC 2 cut(s) 9, 91
ApeKI GCWGC 1 cut(s) 223
ApoI RAATTY 2 cut(s) 206, 234
ArsI GACNNNNNNTTYG 2 cut(s) 155, 187
AspLEI GCGC 2 cut(s) 81, 228
BbvI GCAGC 1 cut(s) 235
BcoDI GTCTC 2 cut(s) 9, 91
BfaI CTAG 2 cut(s) 161, 263
BfoI RGCGCY 1 cut(s) 229
BisI GCNGC 3 cut(s) 77, 224, 229
BlsI GCNGC 3 cut(s) 78, 225, 230
BpuEI CTTGAG 1 cut(s) 200
BsaXI ACNNNNNCTCC 2 cut(s) 16, 46
Bsc4I CCNNNNNNNGG 1 cut(s) 156
Bse3DI GCAATG 1 cut(s) 71
BseGI GGATG 1 cut(s) 121
BseLI CCNNNNNNNGG 1 cut(s) 156
BseMI GCAATG 1 cut(s) 71
BseMII CTCAG 2 cut(s) 179, 295
BseRI GAGGAG 2 cut(s) 79, 205
BseXI GCAGC 1 cut(s) 235
Bsh1236I CGCG 2 cut(s) 79, 125
BslI CCNNNNNNNGG 1 cut(s) 156
BsmAI GTCTC 2 cut(s) 9, 91
BsmI GAATGC 1 cut(s) 297
Bsp143I GATC 2 cut(s) 13, 130
BspACI CCGC 6 cut(s) 44, 77, 125, 212, 229, 256
BspCNI CTCAG 2 cut(s) 180, 294
BspFNI CGCG 2 cut(s) 79, 125
BsrDI GCAATG 1 cut(s) 71
BssMI GATC 2 cut(s) 13, 130
BstAPI GCANNNNNTGC 1 cut(s) 311
BstDEI CTNAG 2 cut(s) 188, 281
BstF5I GGATG 1 cut(s) 121
BstFNI CGCG 2 cut(s) 79, 125
BstH2I RGCGCY 1 cut(s) 229
BstHHI GCGC 2 cut(s) 81, 228
BstKTI GATC 2 cut(s) 16, 133
BstMAI GTCTC 2 cut(s) 9, 91
BstMBI GATC 2 cut(s) 13, 130
BstMWI GCNNNNNNNGC 2 cut(s) 237, 311
BstUI CGCG 2 cut(s) 79, 125
BstV1I GCAGC 1 cut(s) 235
BtgZI GCGATG 2 cut(s) 39, 106
BtsCI GGATG 1 cut(s) 121
CfoI GCGC 2 cut(s) 81, 228
CviAII CATG 1 cut(s) 306
CviJI RGCY 4 cut(s) 23, 160, 185, 272
CviKI_1 RGCY 4 cut(s) 23, 160, 185, 272
DdeI CTNAG 2 cut(s) 188, 281
DpnI GATC 2 cut(s) 15, 132
DpnII GATC 2 cut(s) 13, 130
FaeI CATG 1 cut(s) 309
FaiI YATR 2 cut(s) 254, 307
FatI CATG 1 cut(s) 305
FauI CCCGC 2 cut(s) 51, 249
Fnu4HI GCNGC 3 cut(s) 77, 224, 229
FokI GGATG 1 cut(s) 128
Fsp4HI GCNGC 3 cut(s) 77, 224, 229
FspBI CTAG 2 cut(s) 161, 263
GlaI GCGC 2 cut(s) 80, 227
GluI GCNGC 3 cut(s) 77, 224, 229
HaeII RGCGCY 1 cut(s) 229
HhaI GCGC 2 cut(s) 81, 228
Hin1II CATG 1 cut(s) 309
Hin6I GCGC 2 cut(s) 79, 226
HinP1I GCGC 2 cut(s) 79, 226
HinfI GANTC 3 cut(s) 84, 164, 359
Hpy188I TCNGA 3 cut(s) 169, 189, 377
HpyCH4IV ACGT 1 cut(s) 242
HpyCH4V TGCA 3 cut(s) 223, 295, 346
HpyF10VI GCNNNNNNNGC 2 cut(s) 237, 311
HpyF3I CTNAG 2 cut(s) 188, 281
HpySE526I ACGT 1 cut(s) 242
Hsp92II CATG 1 cut(s) 309
HspAI GCGC 2 cut(s) 79, 226
Kzo9I GATC 2 cut(s) 13, 130
LpnPI CCDG 2 cut(s) 268, 334
Lsp1109I GCAGC 1 cut(s) 235
MaeI CTAG 2 cut(s) 161, 263
MaeII ACGT 1 cut(s) 242
MalI GATC 2 cut(s) 15, 132
MboI GATC 2 cut(s) 13, 130
MfeI CAATTG 1 cut(s) 17
MluCI AATT 3 cut(s) 17, 206, 234
MlyI GAGTC 2 cut(s) 93, 158
MnlI CCTC 6 cut(s) 42, 61, 100, 175, 183, 317
MseI TTAA 1 cut(s) 245
MslI CAYNNNNRTG 1 cut(s) 245
MunI CAATTG 1 cut(s) 17
Mva1269I GAATGC 1 cut(s) 297
MvnI CGCG 2 cut(s) 79, 125
MwoI GCNNNNNNNGC 2 cut(s) 237, 311
NdeII GATC 2 cut(s) 13, 130
NlaIII CATG 1 cut(s) 309
NmeAIII GCCGAG 1 cut(s) 107
PctI GAATGC 1 cut(s) 297
PfeI GAWTC 1 cut(s) 359
PkrI GCNGC 3 cut(s) 78, 225, 230
PleI GAGTC 2 cut(s) 92, 158
PpsI GAGTC 2 cut(s) 92, 158
RseI CAYNNNNRTG 1 cut(s) 245
SaqAI TTAA 1 cut(s) 245
SatI GCNGC 3 cut(s) 77, 224, 229
Sau3AI GATC 2 cut(s) 13, 130
SchI GAGTC 2 cut(s) 93, 158
SetI ASST 4 cut(s) 34, 245, 287, 328
SmiMI CAYNNNNRTG 1 cut(s) 245
SmlI CTYRAG 1 cut(s) 179
SmoI CTYRAG 1 cut(s) 179
Sse9I AATT 3 cut(s) 17, 206, 234
SsiI CCGC 6 cut(s) 44, 77, 125, 212, 229, 256
SspMI CTAG 2 cut(s) 161, 263
TaiI ACGT 1 cut(s) 245
TasI AATT 3 cut(s) 17, 206, 234
TauI GCSGC 2 cut(s) 79, 231
TfiI GAWTC 1 cut(s) 359
Tru1I TTAA 1 cut(s) 245
Tru9I TTAA 1 cut(s) 245
TseI GCWGC 1 cut(s) 223
XapI RAATTY 2 cut(s) 206, 234
XspI CTAG 2 cut(s) 161, 263
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.