RLG00000027711
NAC Family

(NAC) domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000639
Physical Location & Seq
Forward (+)
14236089 .. 14238286
2198 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000027711

Sequence Viewer

Length: 1413 bp
ATGAGCTGCGAAATTTTCCCAATTCCACCGGAATACAGATTCCGTCCCACCAAAAAGGAGCTGCTGTGTGACCACTTGGAGAAGAAGAATCAGTGCAAGGACTCCCAAAGCATGTCCATCATCCCTGTAATCGATCTGTGCAAGCACGAGCCTCATGAGCTACCAGGACTGGCGTTCACAGGGCTGGAAAATCTTGGGAGGAAACTTTTCTTCTTTTTCTTCTTTTGGTTTACAAGGGCAGAGTCTTGGGATAGTCAGGGCAAGTGGTACTTCTTCGCTCCGCGTGATTACAAGTACCCTCACAGCAGTACTCGCTCCAACAGGACTACAGGGGAAGGGTCCTGGAAGGTCACAGGCAAGGACAAAGACATCAAGGCCCCGGGCTCCGAAGCTGTGATTGGGAGAAAGAGGATCTTGACCTTCCAAAAACGTGGAGTGCCGAAATCCCACAAGAGCGGCTGGGTTATTCATGAGTATTATCACATTCAGCCCCGATCTGACCCTCCTAAGCAGATAGGGGACTTTGTTGTCTGTTGCTTGAAGTACAAGTCAGACAACTCTGATCATGATGAGGATGCACCATTCTGCAATCGAGGTAGCGGTAGCGGTAGCTGCAGTATGGTTTCCGATGTTGCAAATCAGCTGGTTGAAGAAAATTTGGCATCCAATGAGCAGTTTAATGGCACTGATGATGAAGCTGAAACTGGTGGCGGTAGGATTACTGAAGCAGAAGAATACCTGGCATATAAGAAGCTGAGAGATGAGCTTCGGATTCCCATCGGAAGTCAGAATGAATTCCAGGTCTCACAAACTGATCCTTGTAATCTTTGGACCTCTGTTGAAGGTCAAGCTGATAGAAGCACTTCGTCTCATATGATTGAAGAGCGACTGGTTAATCCAGAAAATATGGATTCTTTCTTTCATGCACGAGCGCCCCCTCAACTGCACCAGCTACATCAGTCACCGATGAATACCACCAATGTCCATAATGATGAATGCCGTAAGAGGAAATATCCATTTGAAGATAATGACTCTTCTCTTACGAAGAAGAACAATATTTCAACCAATGTTGGTGCTGAACTAGTCAGCAACACCACGTCTAATTCTGAAAACCAAGCTGCAAATGTGATCCTAGAGGCACACAAAAATGATGAACCACTTTTTCATCAACCTCAGCCTCTGGATGGCTGCTGCTCCTCTGCAGTGTGGGCATCCCTAGAGCTGGAAGTTGTTCTGCAAGCCATTGGCACTAATGATGATTGTAATAAGTTGCAATCACCATGTGGAGATATTACTTCTTGTCTAGAAGACAGGAATGAAGTTTCAACCTGTGATGAAGATGAGAATATGGATGGTGTGTTTCCACAGTTGAATTTTAGTCATTTAAATTTAAAAATATCTGCTACAAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

471

Amino Acids

53.15

Weight (kDa)

5.33

Isoelectric Point (pI)

48.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 9 - 159 7.4e-27 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000639)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020
rosa_chinensis RchiOBHm_Chr1g0324821 RchiOBHm_Chr1g0333801 RchiOBHm_Chr1g0361601 RchiOBHm_Chr1g0361611 RchiOBHm_Chr1g0361661
rosa_laevigata RLG00000027711 RLG00000027712 RLG00000027714 RLG00000027715 RLG00000027716 RLG00000029530 RLG00000029531 RLG00000030172
rosa_multiflora Rmu_co8302323.1_g000001 Rmu_co8459497.1_g000001 Rmu_sc0003426.1_g000013 Rmu_sc0003693.1_g000002 Rmu_sc0003693.1_g000003 Rmu_sc0003704.1_g000001 Rmu_sc0003704.1_g000002 Rmu_sc0006101.1_g000001 Rmu_sc0006101.1_g000010 Rmu_sc0006417.1_g000001 Rmu_sc0006417.1_g000002 Rmu_sc0006417.1_g000005 Rmu_sc0007217.1_g000011 Rmu_sc0010981.1_g000006 Rmu_sc0011258.1_g000006 Rmu_sc0017253.1_g000003 Rmu_sc0017253.1_g000004 Rmu_sc0017750.1_g000001 Rmu_sc0026316.1_g000001 Rmu_sc0038193.1_g000002 Rmu_sc0041549.1_g000001
rosa_roxburghii Rroxscaffold_159G00433000 Rroxscaffold_159G00433050 Rroxscaffold_159G00433080 Rroxscaffold_4G00294830 Rroxscaffold_4G00294840 Rroxscaffold_4G00294900 Rroxscaffold_4G00294910 Rroxscaffold_4G00294920 Rroxscaffold_4G00317230 Rroxscaffold_4G00325170 Rroxscaffold_4G00325200 Rroxscaffold_4G00325280
rosa_rugosa Rorug01G0048000 Rorug01G0111600 Rorug01G0111700 Rorug01G0290200 Rorug01G0290300 Rorug01G0290300 Rorug01G0290400 Rorug01G0290600
rosa_samantha Rh1AG064300 Rh1AG064500 Rh1AG134000 Rh1AG134100 Rh1AG300500 Rh1AG300600
rosa_wichuraiana Rw1G005340 Rw1G005390 Rw1G005420 Rw1G011180 Rw1G011190 Rw1G026650 Rw1G026660 Rw1G026680 Rw1G026690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 527
AccBSI CCGCTC 1 cut(s) 456
AccII CGCG 1 cut(s) 283
AciI CCGC 5 cut(s) 281, 456, 600, 606, 711
AclWI GGATC 3 cut(s) 419, 809, 1123
AcsI RAATTY 5 cut(s) 12, 655, 794, 1372, 1387
AcuI CTGAAG 1 cut(s) 744
AdeI CACNNNGTG 1 cut(s) 1283
AfaI GTAC 4 cut(s) 269, 296, 310, 545
AfiI CCNNNNNNNGG 2 cut(s) 1184, 1222
AgsI TTSAA 8 cut(s) 541, 650, 842, 881, 1022, 1062, 1326, 1372
AhlI ACTAGT 1 cut(s) 1081
AjiI CACGTC 1 cut(s) 1098
AjnI CCWGG 4 cut(s) 163, 341, 738, 798
AjuI GAANNNNNNNTTGG 2 cut(s) 381, 413
Alw26I GTCTC 2 cut(s) 808, 873
AlwI GGATC 3 cut(s) 419, 809, 1123
AlwNI CAGNNNCTG 1 cut(s) 1180
Ama87I CYCGRG 1 cut(s) 379
AoxI GGCC 1 cut(s) 375
ApeKI GCWGC 6 cut(s) 6, 61, 612, 1118, 1188, 1191
ApoI RAATTY 5 cut(s) 12, 655, 794, 1372, 1387
Asp700I GAANNNNTTC 4 cut(s) 206, 794, 862, 1230
AspLEI GCGC 1 cut(s) 934
AspS9I GGNCC 3 cut(s) 339, 376, 831
AsuC2I CCSGG 2 cut(s) 380, 381
AsuHPI GGTGA 2 cut(s) 954, 1269
AvaI CYCGRG 1 cut(s) 379
AvaII GGWCC 2 cut(s) 339, 831
BanII GRGCYC 1 cut(s) 386
BauI CACGAG 2 cut(s) 146, 927
BbsI GAAGAC 1 cut(s) 1314
BbvCI CCTCAGC 1 cut(s) 1173
BbvI GCAGC 5 cut(s) 48, 599, 1105, 1175, 1178
BccI CCATC 4 cut(s) 125, 785, 1178, 1346
BceAI ACGGC 1 cut(s) 984
BciT130I CCWGG 4 cut(s) 165, 343, 740, 800
BclI TGATCA 1 cut(s) 562
BcnI CCSGG 2 cut(s) 380, 381
BcoDI GTCTC 2 cut(s) 808, 873
BcuI ACTAGT 1 cut(s) 1081
BfaI CTAG 4 cut(s) 1082, 1133, 1217, 1304
BfmI CTRYAG 3 cut(s) 327, 613, 1200
BfoI RGCGCY 1 cut(s) 935
BisI GCNGC 7 cut(s) 7, 62, 457, 613, 1119, 1189, 1192
BlsI GCNGC 7 cut(s) 8, 63, 458, 614, 1120, 1190, 1193
BmcAI AGTACT 1 cut(s) 310
Bme1390I CCNGG 6 cut(s) 165, 343, 380, 381, 740, 800
Bme18I GGWCC 2 cut(s) 339, 831
BmeT110I CYCGRG 1 cut(s) 379
BmgBI CACGTC 1 cut(s) 1098
BmgT120I GGNCC 3 cut(s) 339, 376, 831
BmiI GGNNCC 3 cut(s) 340, 378, 385
BmrFI CCNGG 6 cut(s) 165, 343, 380, 381, 740, 800
BmsI GCATC 3 cut(s) 565, 671, 1220
BpiI GAAGAC 1 cut(s) 1314
Bpu10I CCTNAGC 2 cut(s) 507, 1173
BpuMI CCSGG 2 cut(s) 380, 381
Bsa29I ATCGAT 1 cut(s) 132
BsaBI GATNNNNATC 1 cut(s) 776
BsaI GGTCTC 1 cut(s) 808
BsaJI CCNNGG 2 cut(s) 378, 379
BsaWI WCCGGW 1 cut(s) 28
BsaXI ACNNNNNCTCC 2 cut(s) 50, 80
Bsc4I CCNNNNNNNGG 2 cut(s) 1184, 1222
Bse1I ACTGG 3 cut(s) 174, 709, 894
Bse8I GATNNNNATC 1 cut(s) 776
BseBI CCWGG 4 cut(s) 165, 343, 740, 800
BseCI ATCGAT 1 cut(s) 132
BseDI CCNNGG 2 cut(s) 378, 379
BseGI GGATG 6 cut(s) 120, 580, 662, 1189, 1211, 1357
BseJI GATNNNNATC 1 cut(s) 776
BseLI CCNNNNNNNGG 2 cut(s) 1184, 1222
BseMII CTCAG 2 cut(s) 746, 1187
BseNI ACTGG 3 cut(s) 174, 709, 894
BseRI GAGGAG 1 cut(s) 1186
BseXI GCAGC 5 cut(s) 48, 599, 1105, 1175, 1178
BseYI CCCAGC 1 cut(s) 459
BsgI GTGCAG 1 cut(s) 929
Bsh1236I CGCG 1 cut(s) 283
BshFI GGCC 1 cut(s) 377
BshVI ATCGAT 1 cut(s) 132
BsiHKCI CYCGRG 1 cut(s) 379
BsiSI CCGG 2 cut(s) 29, 380
BslFI GGGAC 2 cut(s) 30, 533
BslI CCNNNNNNNGG 2 cut(s) 1184, 1222
BsmAI GTCTC 2 cut(s) 808, 873
BsmBI CGTCTC 1 cut(s) 873
BsmFI GGGAC 2 cut(s) 30, 533
BsmI GAATGC 1 cut(s) 1001
BsnI GGCC 1 cut(s) 377
Bso31I GGTCTC 1 cut(s) 808
BsoBI CYCGRG 1 cut(s) 379
Bsp1286I GDGCHC 1 cut(s) 386
Bsp143I GATC 6 cut(s) 133, 411, 494, 562, 814, 1128
BspACI CCGC 5 cut(s) 281, 456, 600, 606, 711
BspANI GGCC 1 cut(s) 377
BspCNI CTCAG 2 cut(s) 747, 1186
BspDI ATCGAT 1 cut(s) 132
BspFNI CGCG 1 cut(s) 283
BspHI TCATGA 3 cut(s) 154, 469, 565
BspLI GGNNCC 3 cut(s) 340, 378, 385
BspMAI CTGCAG 2 cut(s) 617, 1204
BspPI GGATC 3 cut(s) 419, 809, 1123
BspQI GCTCTTC 1 cut(s) 876
BspTNI GGTCTC 1 cut(s) 808
BsrBI CCGCTC 1 cut(s) 456
BsrI ACTGG 3 cut(s) 174, 709, 894
BssECI CCNNGG 2 cut(s) 378, 379
BssMI GATC 6 cut(s) 133, 411, 494, 562, 814, 1128
BssSI CACGAG 2 cut(s) 146, 927
Bst2BI CACGAG 2 cut(s) 146, 927
Bst2UI CCWGG 4 cut(s) 165, 343, 740, 800
Bst4CI ACNGT 1 cut(s) 1368
Bst6I CTCTTC 2 cut(s) 876, 1039
BstC8I GCNNGC 2 cut(s) 143, 1239
BstDEI CTNAG 3 cut(s) 507, 755, 1173
BstF5I GGATG 6 cut(s) 120, 580, 662, 1189, 1211, 1357
BstFNI CGCG 1 cut(s) 283
BstH2I RGCGCY 1 cut(s) 935
BstHHI GCGC 1 cut(s) 934
BstKTI GATC 6 cut(s) 136, 414, 497, 565, 817, 1131
BstMAI GTCTC 2 cut(s) 808, 873
BstMBI GATC 6 cut(s) 133, 411, 494, 562, 814, 1128
BstMWI GCNNNNNNNGC 4 cut(s) 157, 312, 612, 1208
BstNI CCWGG 4 cut(s) 165, 343, 740, 800
BstNSI RCATGY 1 cut(s) 115
BstSCI CCNGG 6 cut(s) 163, 341, 378, 379, 738, 798
BstSFI CTRYAG 3 cut(s) 327, 613, 1200
BstUI CGCG 1 cut(s) 283
BstV1I GCAGC 5 cut(s) 48, 599, 1105, 1175, 1178
BstV2I GAAGAC 1 cut(s) 1314
BstX2I RGATCY 1 cut(s) 411
BstXI CCANNNNNNTGG 1 cut(s) 431
BstYI RGATCY 1 cut(s) 411
Bsu15I ATCGAT 1 cut(s) 132
BsuRI GGCC 1 cut(s) 377
BsuTUI ATCGAT 1 cut(s) 132
BtrI CACGTC 1 cut(s) 1098
BtsCI GGATG 6 cut(s) 120, 580, 662, 1189, 1211, 1357
BtsI GCAGTG 1 cut(s) 1209
BtsIMutI CAGTG 3 cut(s) 98, 684, 1209
Cac8I GCNNGC 2 cut(s) 143, 1239
CaiI CAGNNNCTG 1 cut(s) 1180
CciI TCATGA 3 cut(s) 154, 469, 565
CfoI GCGC 1 cut(s) 934
Cfr13I GGNCC 3 cut(s) 339, 376, 831
Cfr9I CCCGGG 1 cut(s) 379
ClaI ATCGAT 1 cut(s) 132
Csp6I GTAC 4 cut(s) 268, 295, 309, 544
CviAII CATG 6 cut(s) 112, 155, 470, 566, 923, 1281
CviQI GTAC 4 cut(s) 268, 295, 309, 544
DdeI CTNAG 3 cut(s) 507, 755, 1173
DpnI GATC 6 cut(s) 135, 413, 496, 564, 816, 1130
DpnII GATC 6 cut(s) 133, 411, 494, 562, 814, 1128
DraI TTTAAA 2 cut(s) 1386, 1392
DraIII CACNNNGTG 1 cut(s) 1283
DrdI GACNNNNNNGTC 1 cut(s) 527
DseDI GACNNNNNNGTC 1 cut(s) 527
Eam1104I CTCTTC 2 cut(s) 876, 1039
EarI CTCTTC 2 cut(s) 876, 1039
Eco24I GRGCYC 1 cut(s) 386
Eco31I GGTCTC 1 cut(s) 808
Eco47I GGWCC 2 cut(s) 339, 831
Eco57I CTGAAG 1 cut(s) 744
Eco88I CYCGRG 1 cut(s) 379
EcoO109I RGGNCCY 2 cut(s) 339, 376
EcoRI GAATTC 1 cut(s) 794
EcoRII CCWGG 4 cut(s) 163, 341, 738, 798
EcoT38I GRGCYC 1 cut(s) 386
Esp3I CGTCTC 1 cut(s) 873
FaeI CATG 6 cut(s) 115, 158, 473, 569, 926, 1284
FalI AAGNNNNNCTT 4 cut(s) 254, 286, 398, 430
FaqI GGGAC 2 cut(s) 30, 533
FatI CATG 6 cut(s) 111, 154, 469, 565, 922, 1280
FauNDI CATATG 1 cut(s) 873
FbaI TGATCA 1 cut(s) 562
Fnu4HI GCNGC 7 cut(s) 7, 62, 457, 613, 1119, 1189, 1192
FokI GGATG 6 cut(s) 107, 587, 649, 1196, 1198, 1364
FriOI GRGCYC 1 cut(s) 386
Fsp4HI GCNGC 7 cut(s) 7, 62, 457, 613, 1119, 1189, 1192
FspBI CTAG 4 cut(s) 1082, 1133, 1217, 1304
GlaI GCGC 1 cut(s) 933
GluI GCNGC 7 cut(s) 7, 62, 457, 613, 1119, 1189, 1192
GsaI CCCAGC 1 cut(s) 463
HaeII RGCGCY 1 cut(s) 935
HaeIII GGCC 1 cut(s) 377
HapII CCGG 2 cut(s) 29, 380
HhaI GCGC 1 cut(s) 934
Hin1II CATG 6 cut(s) 115, 158, 473, 569, 926, 1284
Hin6I GCGC 1 cut(s) 932
HinP1I GCGC 1 cut(s) 932
HinfI GANTC 7 cut(s) 39, 88, 101, 242, 772, 911, 1031
HpaII CCGG 2 cut(s) 29, 380
HphI GGTGA 2 cut(s) 954, 1269
Hpy166II GTNNAC 2 cut(s) 177, 231
Hpy188I TCNGA 9 cut(s) 388, 499, 553, 562, 628, 771, 782, 789, 1108
Hpy188III TCNNGA 7 cut(s) 155, 415, 470, 566, 899, 1181, 1304
Hpy8I GTNNAC 2 cut(s) 177, 231
HpyAV CCTTC 4 cut(s) 329, 340, 430, 836
HpyCH4III ACNGT 1 cut(s) 1368
HpyCH4IV ACGT 2 cut(s) 430, 1097
HpyF10VI GCNNNNNNNGC 4 cut(s) 157, 312, 612, 1208
HpyF3I CTNAG 3 cut(s) 507, 755, 1173
HpySE526I ACGT 2 cut(s) 430, 1097
Hsp92II CATG 6 cut(s) 115, 158, 473, 569, 926, 1284
HspAI GCGC 1 cut(s) 932
Ksp22I TGATCA 1 cut(s) 562
Kzo9I GATC 6 cut(s) 133, 411, 494, 562, 814, 1128
LguI GCTCTTC 1 cut(s) 876
LmnI GCTCC 5 cut(s) 58, 283, 320, 389, 1199
Lsp1109I GCAGC 5 cut(s) 48, 599, 1105, 1175, 1178
LweI GCATC 3 cut(s) 565, 671, 1220
MaeI CTAG 4 cut(s) 1082, 1133, 1217, 1304
MaeII ACGT 2 cut(s) 430, 1097
MaeIII GTNAC 3 cut(s) 68, 349, 960
MalI GATC 6 cut(s) 135, 413, 496, 564, 816, 1130
MbiI CCGCTC 1 cut(s) 456
MboI GATC 6 cut(s) 133, 411, 494, 562, 814, 1128
MflI RGATCY 1 cut(s) 411
MhlI GDGCHC 1 cut(s) 386
MluCI AATT 7 cut(s) 12, 21, 655, 794, 1102, 1372, 1387
MlyI GAGTC 3 cut(s) 95, 251, 1025
MmeI TCCRAC 1 cut(s) 342
MroXI GAANNNNTTC 4 cut(s) 206, 794, 862, 1230
MseI TTAA 4 cut(s) 678, 894, 1385, 1391
MslI CAYNNNNRTG 2 cut(s) 990, 1146
MspA1I CMGCKG 1 cut(s) 643
MspI CCGG 2 cut(s) 29, 380
MspR9I CCNGG 6 cut(s) 165, 343, 380, 381, 740, 800
Mva1269I GAATGC 1 cut(s) 1001
MvaI CCWGG 4 cut(s) 165, 343, 740, 800
MvnI CGCG 1 cut(s) 283
MwoI GCNNNNNNNGC 4 cut(s) 157, 312, 612, 1208
NciI CCSGG 2 cut(s) 380, 381
NdeI CATATG 1 cut(s) 873
NdeII GATC 6 cut(s) 133, 411, 494, 562, 814, 1128
NlaIII CATG 6 cut(s) 115, 158, 473, 569, 926, 1284
NlaIV GGNNCC 3 cut(s) 340, 378, 385
NmuCI GTSAC 3 cut(s) 68, 349, 960
NspI RCATGY 1 cut(s) 115
PagI TCATGA 3 cut(s) 154, 469, 565
PciSI GCTCTTC 1 cut(s) 876
PctI GAATGC 1 cut(s) 1001
PdmI GAANNNNTTC 4 cut(s) 206, 794, 862, 1230
PfeI GAWTC 4 cut(s) 39, 88, 772, 911
PfoI TCCNGGA 1 cut(s) 341
PkrI GCNGC 7 cut(s) 8, 63, 458, 614, 1120, 1190, 1193
PleI GAGTC 3 cut(s) 95, 250, 1025
PpsI GAGTC 3 cut(s) 95, 250, 1025
PpuMI RGGWCCY 1 cut(s) 339
Psp5II RGGWCCY 1 cut(s) 339
Psp6I CCWGG 4 cut(s) 163, 341, 738, 798
PspFI CCCAGC 1 cut(s) 459
PspGI CCWGG 4 cut(s) 163, 341, 738, 798
PspN4I GGNNCC 3 cut(s) 340, 378, 385
PspPI GGNCC 3 cut(s) 339, 376, 831
PspPPI RGGWCCY 1 cut(s) 339
PstI CTGCAG 2 cut(s) 617, 1204
PstNI CAGNNNCTG 1 cut(s) 1180
PsuI RGATCY 1 cut(s) 411
PvuII CAGCTG 1 cut(s) 643
RsaI GTAC 4 cut(s) 269, 296, 310, 545
RsaNI GTAC 4 cut(s) 268, 295, 309, 544
RseI CAYNNNNRTG 2 cut(s) 990, 1146
SapI GCTCTTC 1 cut(s) 876
SaqAI TTAA 4 cut(s) 678, 894, 1385, 1391
SatI GCNGC 7 cut(s) 7, 62, 457, 613, 1119, 1189, 1192
Sau3AI GATC 6 cut(s) 133, 411, 494, 562, 814, 1128
Sau96I GGNCC 3 cut(s) 339, 376, 831
ScaI AGTACT 1 cut(s) 310
SchI GAGTC 3 cut(s) 95, 251, 1025
ScrFI CCNGG 6 cut(s) 165, 343, 380, 381, 740, 800
SduI GDGCHC 1 cut(s) 386
SfaNI GCATC 3 cut(s) 565, 671, 1220
SfcI CTRYAG 3 cut(s) 327, 613, 1200
SinI GGWCC 2 cut(s) 339, 831
SmaI CCCGGG 1 cut(s) 381
SmiI ATTTAAAT 1 cut(s) 1386
SmiMI CAYNNNNRTG 2 cut(s) 990, 1146
SpeI ACTAGT 1 cut(s) 1081
Sse9I AATT 7 cut(s) 12, 21, 655, 794, 1102, 1372, 1387
SsiI CCGC 5 cut(s) 281, 456, 600, 606, 711
SspI AATATT 1 cut(s) 1057
SspMI CTAG 4 cut(s) 1082, 1133, 1217, 1304
StyD4I CCNGG 6 cut(s) 163, 341, 378, 379, 738, 798
SwaI ATTTAAAT 1 cut(s) 1386
TaaI ACNGT 1 cut(s) 1368
TaiI ACGT 2 cut(s) 433, 1100
TaqI TCGA 2 cut(s) 132, 592
TasI AATT 7 cut(s) 12, 21, 655, 794, 1102, 1372, 1387
TatI WGTACW 2 cut(s) 308, 543
TauI GCSGC 1 cut(s) 459
TfiI GAWTC 4 cut(s) 39, 88, 772, 911
Tru1I TTAA 4 cut(s) 678, 894, 1385, 1391
Tru9I TTAA 4 cut(s) 678, 894, 1385, 1391
TscAI CASTG 3 cut(s) 98, 691, 1209
TseFI GTSAC 3 cut(s) 68, 349, 960
TseI GCWGC 6 cut(s) 6, 61, 612, 1118, 1188, 1191
Tsp45I GTSAC 3 cut(s) 68, 349, 960
TspGWI ACGGA 1 cut(s) 32
TspMI CCCGGG 1 cut(s) 379
TspRI CASTG 3 cut(s) 98, 691, 1209
VpaK11BI GGWCC 2 cut(s) 339, 831
XapI RAATTY 5 cut(s) 12, 655, 794, 1372, 1387
XbaI TCTAGA 1 cut(s) 1303
XceI RCATGY 1 cut(s) 115
XmaI CCCGGG 1 cut(s) 379
XmnI GAANNNNTTC 4 cut(s) 206, 794, 862, 1230
XspI CTAG 4 cut(s) 1082, 1133, 1217, 1304
ZrmI AGTACT 1 cut(s) 310
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.