Rroxscaffold_4G00325170
NAC Family

(NAC) domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000639
Physical Location & Seq
Forward (+)
56936928 .. 56940164
3237 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00325170.1

Sequence Viewer

Length: 1671 bp
ATGACATTCCCTTACAAGGACAGAGAAAATGGAAAAATTAACGCGTGTTTGGTCGTTACTCGTCACTGGTGGGGTCCCACTCATGACGCGTGTCATTCCAAACAGTTGAACTTGCTTCCAAAGCTCAGGACTTTCAGCTCAAAGAGCACTTGGCATTATATATACAACCTCACTCTTTCCTCTGCAGTTCAGAGCAAAAACAAAACTGATCAAAATCAGCTATTCAAAGTGAAAGAGATGAGCTGCGGTGACTTCACAGTTCCGAAGGGATACCGATTCCATCCCTCCGACGAGGAGCTGCTTAGTCACTACTTGGAGGAGAAGAATCAGTCCAAGGACTCCCAGATCACGACCATCATCCCTGAAATCGATGTGTGCAAGCACGAACCTCGCGAGTTGCCAGAACTGGCGTTCACAAGGGCGGAAAGTCTGGGCAGGAAATTTTTCTTTTTCTTCTTTTTTTGGTTGGCAAGGGAAGTGTCTTGGGACAATCAAGGAAAGTGGTACTTCTTCACTCGGCGTGATTACAAGTACAATAACAGCACTCGCTCCAACAGGACTACAGGGGAAGGGTTTTGGAAGATCACAGGCAAGGACCGTGCAATCAAGGCCCCCCGCTCCAAAGCTGTCATTGGGAGAAAGAGGACGTTGACCTTCTACAAACGTGGAGTGCCCAAATCCCAGAAGACCAGCTGGGTTCTTCATGAGTATTATCTCATTCAGGCACATTCTGAACCTCCTAAGCAGATAGGGGACTTTGTTGTCTGCTGCTTGAAGTACAAGTCAGACAACTCTGATTATGATAAGGATGCCCCATTCTGCGATCGAGGTAGCAGTAGCTGCAGTATGGCCTCCAATGTTGAAAATCAAGCTGAAGAAAATTGGGCATCGAAAGAGCTGGTTAATGTTGTTCCAATTCCCAGTGGAAATGATGATGAAGCTGAAACTGGTGGTGGTATGATTACAGAAGAAGAGGAATACCTGGCTTTAAAGGAGCTGAGAGACGCTCTTCAGATTCCCATTGGCAATCCACATGAATTCGAAGGCACGCAAACTGAACCTTGTCGTATAGATAAGAATGATCCTTCAACCAATAAGAATGATCCTTCAACTGCTGTTGAAGGCCAACCTGATAGAAGCAATTCATCTGATATGATTGACGAGGTCAGAACAAACTTGCATTTTGATTTCTTCAATGAAATTTTCAATATGGAGCACAAAAGTATAATGAAAATGTTACCTCACTCTTTCTTGTTTGTGATGAAACAGCTACTAGATAACCCAGAAAATCTGGATTCACTCTTTCATCTGCCTGCACCACCTCAACTGCATCAGTCACCGATGCATACCACCAATATCCATAATGATGAATGTCGCAAGAGGACATATCCATTTGAGGGTAATGACCCTTCTCTTACGAAGAAGAATAATATCTCAACCAATGATAACAACGAATTAGTTAGCAACATCGCATCTAGTTCTGAAAATCAAGCCGCAAATATGATTCCAGAGGGATATTCTCAACTAGGAGCAAATCTGGGATCAGAATTTGATTCATTTCTGCCAAAGGAGTACGATTATACATTCAGTTACAGAAACACCGAAGTAGTACATGGATCGGTAAACGATTATTCTGCATTAGCCATTGGAGCAACGCTCCAGCATAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

556

Amino Acids

63.82

Weight (kDa)

5.91

Isoelectric Point (pI)

50.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 88 - 238 6e-32 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000639)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020
rosa_chinensis RchiOBHm_Chr1g0324821 RchiOBHm_Chr1g0333801 RchiOBHm_Chr1g0361601 RchiOBHm_Chr1g0361611 RchiOBHm_Chr1g0361661
rosa_laevigata RLG00000027711 RLG00000027712 RLG00000027714 RLG00000027715 RLG00000027716 RLG00000029530 RLG00000029531 RLG00000030172
rosa_multiflora Rmu_co8302323.1_g000001 Rmu_co8459497.1_g000001 Rmu_sc0003426.1_g000013 Rmu_sc0003693.1_g000002 Rmu_sc0003693.1_g000003 Rmu_sc0003704.1_g000001 Rmu_sc0003704.1_g000002 Rmu_sc0006101.1_g000001 Rmu_sc0006101.1_g000010 Rmu_sc0006417.1_g000001 Rmu_sc0006417.1_g000002 Rmu_sc0006417.1_g000005 Rmu_sc0007217.1_g000011 Rmu_sc0010981.1_g000006 Rmu_sc0011258.1_g000006 Rmu_sc0017253.1_g000003 Rmu_sc0017253.1_g000004 Rmu_sc0017750.1_g000001 Rmu_sc0026316.1_g000001 Rmu_sc0038193.1_g000002 Rmu_sc0041549.1_g000001
rosa_roxburghii Rroxscaffold_159G00433000 Rroxscaffold_159G00433050 Rroxscaffold_159G00433080 Rroxscaffold_4G00294830 Rroxscaffold_4G00294840 Rroxscaffold_4G00294900 Rroxscaffold_4G00294910 Rroxscaffold_4G00294920 Rroxscaffold_4G00317230 Rroxscaffold_4G00325170 Rroxscaffold_4G00325200 Rroxscaffold_4G00325280
rosa_rugosa Rorug01G0048000 Rorug01G0111600 Rorug01G0111700 Rorug01G0290200 Rorug01G0290300 Rorug01G0290300 Rorug01G0290400 Rorug01G0290600
rosa_samantha Rh1AG064300 Rh1AG064500 Rh1AG134000 Rh1AG134100 Rh1AG300500 Rh1AG300600
rosa_wichuraiana Rw1G005340 Rw1G005390 Rw1G005420 Rw1G011180 Rw1G011190 Rw1G026650 Rw1G026660 Rw1G026680 Rw1G026690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 761
AccBSI CCGCTC 1 cut(s) 618
AccII CGCG 3 cut(s) 44, 89, 393
AciI CCGC 4 cut(s) 246, 422, 616, 1494
AclWI GGATC 4 cut(s) 1076, 1097, 1549, 1624
AcsI RAATTY 4 cut(s) 440, 1037, 1200, 1547
AcuI CTGAAG 2 cut(s) 894, 995
AfaI GTAC 5 cut(s) 506, 533, 779, 1574, 1611
AfiI CCNNNNNNNGG 2 cut(s) 16, 1397
AflIII ACRYGT 2 cut(s) 42, 87
AgsI TTSAA 9 cut(s) 109, 226, 775, 863, 1089, 1110, 1121, 1195, 1207
AjnI CCWGG 1 cut(s) 981
Alw21I GWGCWC 2 cut(s) 149, 1218
Alw26I GTCTC 1 cut(s) 996
AlwI GGATC 4 cut(s) 1076, 1097, 1549, 1624
AlwNI CAGNNNCTG 1 cut(s) 840
AoxI GGCC 3 cut(s) 609, 849, 1123
ApeKI GCWGC 4 cut(s) 243, 298, 768, 840
ApoI RAATTY 4 cut(s) 440, 1037, 1200, 1547
Asp700I GAANNNNTTC 2 cut(s) 443, 1141
AspS9I GGNCC 3 cut(s) 74, 595, 610
AsuHPI GGTGA 2 cut(s) 260, 1329
AsuII TTCGAA 1 cut(s) 1041
AvaII GGWCC 2 cut(s) 74, 595
BaeGI GKGCMC 1 cut(s) 675
BarI GAAGNNNNNNTAC 2 cut(s) 1393, 1425
BbsI GAAGAC 1 cut(s) 692
Bbv12I GWGCWC 2 cut(s) 149, 1218
BbvI GCAGC 4 cut(s) 230, 285, 755, 827
BccI CCATC 2 cut(s) 288, 362
BcgI CGANNNNNNTGC 4 cut(s) 371, 405, 1616, 1650
BciT130I CCWGG 1 cut(s) 983
BciVI GTATCC 1 cut(s) 263
BclI TGATCA 1 cut(s) 208
BcoDI GTCTC 1 cut(s) 996
BfaI CTAG 3 cut(s) 1274, 1476, 1526
BfmI CTRYAG 3 cut(s) 183, 561, 841
BfuI GTATCC 1 cut(s) 263
BisI GCNGC 5 cut(s) 244, 299, 769, 841, 1494
BlsI GCNGC 5 cut(s) 245, 300, 770, 842, 1495
Bme1390I CCNGG 1 cut(s) 983
Bme18I GGWCC 2 cut(s) 74, 595
BmgT120I GGNCC 3 cut(s) 74, 595, 610
BmiI GGNNCC 3 cut(s) 75, 76, 612
BmrFI CCNGG 1 cut(s) 983
BmrI ACTGGG 1 cut(s) 915
BmsI GCATC 5 cut(s) 799, 896, 1332, 1339, 1481
BmuI ACTGGG 1 cut(s) 915
BoxI GACNNNNGTC 1 cut(s) 90
BpiI GAAGAC 1 cut(s) 692
BplI GAGNNNNNCTC 3 cut(s) 991, 1023, 1641
BpmI CTGGAG 1 cut(s) 1643
Bpu10I CCTNAGC 2 cut(s) 125, 741
Bpu14I TTCGAA 1 cut(s) 1041
Bsa29I ATCGAT 1 cut(s) 369
BsaBI GATNNNNATC 1 cut(s) 213
BsaJI CCNNGG 1 cut(s) 333
Bsc4I CCNNNNNNNGG 2 cut(s) 16, 1397
Bse1I ACTGG 4 cut(s) 71, 411, 921, 952
Bse8I GATNNNNATC 1 cut(s) 213
BseBI CCWGG 1 cut(s) 983
BseCI ATCGAT 1 cut(s) 369
BseDI CCNNGG 1 cut(s) 333
BseGI GGATG 3 cut(s) 280, 357, 814
BseJI GATNNNNATC 1 cut(s) 213
BseLI CCNNNNNNNGG 2 cut(s) 16, 1397
BseMII CTCAG 2 cut(s) 139, 989
BseNI ACTGG 4 cut(s) 71, 411, 921, 952
BseRI GAGGAG 2 cut(s) 308, 332
BseSI GKGCMC 1 cut(s) 675
BseXI GCAGC 4 cut(s) 230, 285, 755, 827
BseYI CCCAGC 1 cut(s) 693
BsgI GTGCAG 1 cut(s) 1299
Bsh1236I CGCG 3 cut(s) 44, 89, 393
Bsh1285I CGRYCG 1 cut(s) 826
BshFI GGCC 3 cut(s) 611, 851, 1125
BshVI ATCGAT 1 cut(s) 369
BsiEI CGRYCG 1 cut(s) 826
BsiHKAI GWGCWC 2 cut(s) 149, 1218
BslFI GGGAC 3 cut(s) 60, 500, 767
BslI CCNNNNNNNGG 2 cut(s) 16, 1397
BsmAI GTCTC 1 cut(s) 996
BsmBI CGTCTC 1 cut(s) 996
BsmFI GGGAC 3 cut(s) 60, 500, 767
BsnI GGCC 3 cut(s) 611, 851, 1125
Bsp119I TTCGAA 1 cut(s) 1041
Bsp1286I GDGCHC 3 cut(s) 149, 675, 1218
Bsp143I GATC 8 cut(s) 208, 345, 582, 823, 1081, 1102, 1541, 1616
Bsp68I TCGCGA 1 cut(s) 393
BspACI CCGC 4 cut(s) 246, 422, 616, 1494
BspANI GGCC 3 cut(s) 611, 851, 1125
BspCNI CTCAG 2 cut(s) 138, 990
BspDI ATCGAT 1 cut(s) 369
BspFNI CGCG 3 cut(s) 44, 89, 393
BspHI TCATGA 2 cut(s) 82, 703
BspLI GGNNCC 3 cut(s) 75, 76, 612
BspMAI CTGCAG 2 cut(s) 187, 845
BspPI GGATC 4 cut(s) 1076, 1097, 1549, 1624
BspQI GCTCTTC 1 cut(s) 1014
BspT104I TTCGAA 1 cut(s) 1041
BsrBI CCGCTC 1 cut(s) 618
BsrI ACTGG 4 cut(s) 71, 411, 921, 952
BssECI CCNNGG 1 cut(s) 333
BssMI GATC 8 cut(s) 208, 345, 582, 823, 1081, 1102, 1541, 1616
BssT1I CCWWGG 1 cut(s) 333
Bst2UI CCWGG 1 cut(s) 983
Bst4CI ACNGT 3 cut(s) 105, 259, 599
Bst6I CTCTTC 2 cut(s) 966, 1014
BstAPI GCANNNNNTGC 1 cut(s) 840
BstBI TTCGAA 1 cut(s) 1041
BstC8I GCNNGC 3 cut(s) 380, 1049, 1314
BstDEI CTNAG 4 cut(s) 125, 302, 741, 998
BstF5I GGATG 3 cut(s) 280, 357, 814
BstFNI CGCG 3 cut(s) 44, 89, 393
BstKTI GATC 8 cut(s) 211, 348, 585, 826, 1084, 1105, 1544, 1619
BstMAI GTCTC 1 cut(s) 996
BstMBI GATC 8 cut(s) 208, 345, 582, 823, 1081, 1102, 1541, 1616
BstMCI CGRYCG 1 cut(s) 826
BstMWI GCNNNNNNNGC 5 cut(s) 121, 144, 608, 840, 1649
BstNI CCWGG 1 cut(s) 983
BstPAI GACNNNNGTC 1 cut(s) 90
BstSCI CCNGG 1 cut(s) 981
BstSFI CTRYAG 3 cut(s) 183, 561, 841
BstSLI GKGCMC 1 cut(s) 675
BstUI CGCG 3 cut(s) 44, 89, 393
BstV1I GCAGC 4 cut(s) 230, 285, 755, 827
BstV2I GAAGAC 1 cut(s) 692
Bsu15I ATCGAT 1 cut(s) 369
BsuI GTATCC 1 cut(s) 263
BsuRI GGCC 3 cut(s) 611, 851, 1125
BsuTUI ATCGAT 1 cut(s) 369
BtgZI GCGATG 1 cut(s) 1453
BtsCI GGATG 3 cut(s) 280, 357, 814
BtsIMutI CAGTG 2 cut(s) 64, 928
BtuMI TCGCGA 1 cut(s) 393
Cac8I GCNNGC 3 cut(s) 380, 1049, 1314
CaiI CAGNNNCTG 1 cut(s) 840
CciI TCATGA 2 cut(s) 82, 703
Cfr13I GGNCC 3 cut(s) 74, 595, 610
ClaI ATCGAT 1 cut(s) 369
CseI GACGC 2 cut(s) 95, 1013
Csp6I GTAC 5 cut(s) 505, 532, 778, 1573, 1610
CspCI CAANNNNNGTGG 2 cut(s) 482, 517
CviAII CATG 4 cut(s) 83, 704, 1034, 1613
CviQI GTAC 5 cut(s) 505, 532, 778, 1573, 1610
DdeI CTNAG 4 cut(s) 125, 302, 741, 998
DpnI GATC 8 cut(s) 210, 347, 584, 825, 1083, 1104, 1543, 1618
DpnII GATC 8 cut(s) 208, 345, 582, 823, 1081, 1102, 1541, 1616
DraI TTTAAA 1 cut(s) 990
DrdI GACNNNNNNGTC 1 cut(s) 761
DseDI GACNNNNNNGTC 1 cut(s) 761
Eam1104I CTCTTC 2 cut(s) 966, 1014
EarI CTCTTC 2 cut(s) 966, 1014
EciI GGCGGA 1 cut(s) 437
Eco130I CCWWGG 1 cut(s) 333
Eco47I GGWCC 2 cut(s) 74, 595
Eco57I CTGAAG 2 cut(s) 894, 995
EcoO109I RGGNCCY 2 cut(s) 74, 610
EcoRI GAATTC 1 cut(s) 1037
EcoRII CCWGG 1 cut(s) 981
EcoT14I CCWWGG 1 cut(s) 333
EcoT22I ATGCAT 1 cut(s) 1347
ErhI CCWWGG 1 cut(s) 333
Esp3I CGTCTC 1 cut(s) 996
FaeI CATG 4 cut(s) 86, 707, 1037, 1616
FalI AAGNNNNNCTT 2 cut(s) 491, 523
FaqI GGGAC 3 cut(s) 60, 500, 767
FatI CATG 4 cut(s) 82, 703, 1033, 1612
FauI CCCGC 1 cut(s) 623
FbaI TGATCA 1 cut(s) 208
Fnu4HI GCNGC 5 cut(s) 244, 299, 769, 841, 1494
FokI GGATG 3 cut(s) 267, 344, 821
Fsp4HI GCNGC 5 cut(s) 244, 299, 769, 841, 1494
FspBI CTAG 3 cut(s) 1274, 1476, 1526
GluI GCNGC 5 cut(s) 244, 299, 769, 841, 1494
GsaI CCCAGC 1 cut(s) 697
GsuI CTGGAG 1 cut(s) 1643
HaeIII GGCC 3 cut(s) 611, 851, 1125
HgaI GACGC 2 cut(s) 95, 1013
Hin1II CATG 4 cut(s) 86, 707, 1037, 1616
HincII GTYRAC 1 cut(s) 651
HindII GTYRAC 1 cut(s) 651
HinfI GANTC 7 cut(s) 276, 325, 338, 1015, 1295, 1504, 1553
HphI GGTGA 2 cut(s) 260, 1329
Hpy166II GTNNAC 3 cut(s) 414, 651, 1624
Hpy188III TCNNGA 7 cut(s) 83, 127, 349, 392, 704, 1292, 1508
Hpy8I GTNNAC 3 cut(s) 414, 651, 1624
Hpy99I CGWCG 1 cut(s) 293
HpyAV CCTTC 8 cut(s) 259, 563, 664, 1037, 1095, 1115, 1116, 1419
HpyCH4III ACNGT 3 cut(s) 105, 259, 599
HpyCH4IV ACGT 2 cut(s) 647, 664
HpyCH4V TGCA 9 cut(s) 185, 378, 602, 843, 1180, 1316, 1330, 1345, 1637
HpyF10VI GCNNNNNNNGC 5 cut(s) 121, 144, 608, 840, 1649
HpyF3I CTNAG 4 cut(s) 125, 302, 741, 998
HpySE526I ACGT 2 cut(s) 647, 664
Hsp92II CATG 4 cut(s) 86, 707, 1037, 1616
KflI GGGWCCC 1 cut(s) 74
Ksp22I TGATCA 1 cut(s) 208
Kzo9I GATC 8 cut(s) 208, 345, 582, 823, 1081, 1102, 1541, 1616
LguI GCTCTTC 1 cut(s) 1014
LmnI GCTCC 8 cut(s) 295, 554, 623, 994, 1213, 1529, 1649, 1662
Lsp1109I GCAGC 4 cut(s) 230, 285, 755, 827
LweI GCATC 5 cut(s) 799, 896, 1332, 1339, 1481
MaeI CTAG 3 cut(s) 1274, 1476, 1526
MaeII ACGT 2 cut(s) 647, 664
MaeIII GTNAC 7 cut(s) 55, 62, 248, 305, 1236, 1335, 1589
MalI GATC 8 cut(s) 210, 347, 584, 825, 1083, 1104, 1543, 1618
MbiI CCGCTC 1 cut(s) 618
MboI GATC 8 cut(s) 208, 345, 582, 823, 1081, 1102, 1541, 1616
MhlI GDGCHC 3 cut(s) 149, 675, 1218
MluCI AATT 9 cut(s) 36, 440, 880, 915, 1037, 1141, 1200, 1454, 1547
MluI ACGCGT 2 cut(s) 42, 87
MlyI GAGTC 1 cut(s) 332
MmeI TCCRAC 2 cut(s) 312, 576
Mph1103I ATGCAT 1 cut(s) 1347
MroXI GAANNNNTTC 2 cut(s) 443, 1141
MseI TTAA 3 cut(s) 39, 903, 989
MslI CAYNNNNRTG 1 cut(s) 1365
MspA1I CMGCKG 1 cut(s) 693
MspR9I CCNGG 1 cut(s) 983
MvaI CCWGG 1 cut(s) 983
MvnI CGCG 3 cut(s) 44, 89, 393
MwoI GCNNNNNNNGC 5 cut(s) 121, 144, 608, 840, 1649
NdeII GATC 8 cut(s) 208, 345, 582, 823, 1081, 1102, 1541, 1616
NlaIII CATG 4 cut(s) 86, 707, 1037, 1616
NlaIV GGNNCC 3 cut(s) 75, 76, 612
NmeAIII GCCGAG 1 cut(s) 496
NmuCI GTSAC 4 cut(s) 62, 248, 305, 1335
NruI TCGCGA 1 cut(s) 393
NsiI ATGCAT 1 cut(s) 1347
NspV TTCGAA 1 cut(s) 1041
PagI TCATGA 2 cut(s) 82, 703
PciSI GCTCTTC 1 cut(s) 1014
PcsI WCGNNNNNNNCGW 1 cut(s) 390
PdmI GAANNNNTTC 2 cut(s) 443, 1141
PfeI GAWTC 6 cut(s) 276, 325, 1015, 1295, 1504, 1553
PflFI GACNNNGTC 1 cut(s) 1163
PkrI GCNGC 5 cut(s) 245, 300, 770, 842, 1495
Ple19I CGATCG 1 cut(s) 826
PleI GAGTC 1 cut(s) 332
PpsI GAGTC 1 cut(s) 332
PpuMI RGGWCCY 1 cut(s) 74
PshAI GACNNNNGTC 1 cut(s) 90
Psp5II RGGWCCY 1 cut(s) 74
Psp6I CCWGG 1 cut(s) 981
PspFI CCCAGC 1 cut(s) 693
PspGI CCWGG 1 cut(s) 981
PspN4I GGNNCC 3 cut(s) 75, 76, 612
PspPI GGNCC 3 cut(s) 74, 595, 610
PspPPI RGGWCCY 1 cut(s) 74
PstI CTGCAG 2 cut(s) 187, 845
PstNI CAGNNNCTG 1 cut(s) 840
PsyI GACNNNGTC 1 cut(s) 1163
PvuI CGATCG 1 cut(s) 826
PvuII CAGCTG 1 cut(s) 693
RruI TCGCGA 1 cut(s) 393
RsaI GTAC 5 cut(s) 506, 533, 779, 1574, 1611
RsaNI GTAC 5 cut(s) 505, 532, 778, 1573, 1610
RseI CAYNNNNRTG 1 cut(s) 1365
SapI GCTCTTC 1 cut(s) 1014
SaqAI TTAA 3 cut(s) 39, 903, 989
SatI GCNGC 5 cut(s) 244, 299, 769, 841, 1494
Sau3AI GATC 8 cut(s) 208, 345, 582, 823, 1081, 1102, 1541, 1616
Sau96I GGNCC 3 cut(s) 74, 595, 610
SchI GAGTC 1 cut(s) 332
ScrFI CCNGG 1 cut(s) 983
SduI GDGCHC 3 cut(s) 149, 675, 1218
SfaNI GCATC 5 cut(s) 799, 896, 1332, 1339, 1481
SfcI CTRYAG 3 cut(s) 183, 561, 841
SfuI TTCGAA 1 cut(s) 1041
SinI GGWCC 2 cut(s) 74, 595
SmiMI CAYNNNNRTG 1 cut(s) 1365
Sse9I AATT 9 cut(s) 36, 440, 880, 915, 1037, 1141, 1200, 1454, 1547
SsiI CCGC 4 cut(s) 246, 422, 616, 1494
SspMI CTAG 3 cut(s) 1274, 1476, 1526
StyD4I CCNGG 1 cut(s) 981
StyI CCWWGG 1 cut(s) 333
TaaI ACNGT 3 cut(s) 105, 259, 599
TaiI ACGT 2 cut(s) 650, 667
TaqI TCGA 4 cut(s) 369, 826, 890, 1041
TasI AATT 9 cut(s) 36, 440, 880, 915, 1037, 1141, 1200, 1454, 1547
TatI WGTACW 3 cut(s) 531, 777, 1609
TauI GCSGC 1 cut(s) 1496
TfiI GAWTC 6 cut(s) 276, 325, 1015, 1295, 1504, 1553
Tru1I TTAA 3 cut(s) 39, 903, 989
Tru9I TTAA 3 cut(s) 39, 903, 989
TscAI CASTG 2 cut(s) 71, 928
TseFI GTSAC 4 cut(s) 62, 248, 305, 1335
TseI GCWGC 4 cut(s) 243, 298, 768, 840
Tsp45I GTSAC 4 cut(s) 62, 248, 305, 1335
TspRI CASTG 2 cut(s) 71, 928
Tth111I GACNNNGTC 1 cut(s) 1163
VpaK11BI GGWCC 2 cut(s) 74, 595
XapI RAATTY 4 cut(s) 440, 1037, 1200, 1547
XmnI GAANNNNTTC 2 cut(s) 443, 1141
XspI CTAG 3 cut(s) 1274, 1476, 1526
Zsp2I ATGCAT 1 cut(s) 1347
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.