Rroxscaffold_4G00294900
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000639
Physical Location & Seq
Forward (+)
14815178 .. 14818840
3663 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00294900.1

Sequence Viewer

Length: 1941 bp
ATGAGCTGGGGCCTTTTCACAGTTCCACCAGGATACCGATTCCGTCCCACTGACGAGGAGCTGCTGAGTGACTTGGAGAAGAAGAATCAGGGCAAGGACTCCCAAATCATGTCCATCATCCCTAAAATCGAGGTGTGCAAGCACGAGCCTCGTGAGCTACCAGAGTCTTGGTATAGTCAGGGCAAGTGGTACTTCTTCGCTCCGCGTGAATACAAGTACCCAAACAGCAATCGCTCCAACAGGACTACAGGGGAAGGGTCCTGGAAGGTCACAAGCAAGGACCGAGACATCAAGGCGCCGGGCACCAAAGCTGTGATTGGGAGAAAGAGGACCTTGACCTTCTACATTAAACGTGGAGTGCTGAAACCCCAGAAGACCGGCTGGGTTATTCATGAGTATTATCTCACTCGGGCAAATTCTGATGAGCAGATAGGGGACTTTGTTGTCTGTTGCTTGAAGTACAAGTCAGACAACTCTGATCATCATGAGGATGCCCCATTCTGCTATCGCCGTAGCGGTAGCGGTAGCTGCAGTATGGCCTCTAATGTTGCAAATCAGGCTGAAGAAAATTTGGCATCCAATGAGCAGGGTAATGTTGTTCCAATTCCCAATGGCAATGATGGAGAAGCTGAAACTGGTGGTGGTACGATTACTGAAGCAGAAGAACGCCTGGCATTTAAGAAGCTGGGAGATGCTCTTCAGATTCCCATTGGAAATCAGCATGAAGTCCAAGGCTTGCAAATTGATCCGTGTAATCTTTCGACCTCTGTTGAAGGTCAAGCTGATAGAATTAATTCATCTGATATGAATGAAGAGCTACTAAATGATCCAGAAAATATGGATTCGTTGTTTCATCCACCCGCGGCACCTCTACTGCATCAGCTACATCAGTCACCAGTGTATACCACCAATGTCCATAATGATGAATGCCGTAAGAGGAAATATCCATTTGAGGATAATCACTCTTCTCATACGAAGAAGAACAATATTTCAACCATTGATGGTGATGAACTAGTTAGCAACACCACATCTAATTCTGAAAATCAAGCTGCAGATGTGATTCCAGAGGGATATTTTCAACCAGGAGCAAATCTGGGATCTGATTTTGATTCATATCCGAAGCAGGCCCAGGGTGACTTTGTTATTTGTCGCGGGTGTGTGACGAAGAATAAATCAGATAAGAAGGATTCTTTGGTAAGTGATGAAGGGGAACCGGATAGTGCAGATGTGTCTAATTGGAAAATTCAAGCGGCACACAAAAATGATGAACCACTTCTTCATCAACCTCAGCCTCTGGATGACAGCTGCTCCTCTGCAGTGCGGTCATCGGCATCCCTAGAGCTGGAAGCTGTTCTGCAAGCCAATGGCACTAATGATGATTGTAACAAGTCGCAATCACCATTTGGAGATATTAATTCTTGTCTAGAAGACAAGAATGAAGTTTCAACCTGTGATGAAAATGAGAGTATGGATGGTGTATTTGCACAGCTATGTGACCCATCGGAAGTAAATCTCGATTCACTCTTTTGTCCACTTCAGCCACAAGATGACCGCCTCTCCATACAACAGTCACCAATATACACAAAGCTGGGAAATGTTCCAGATGCCAATCTCTATTTTGGTGAATGCAATAATTGGCAATCTGCATTTAAGAAAAACTTTTCAACCAATGAAGTTGACATACCAGTTAGACATATCATGTCTAATTTTGAAAATCAAGCTACAGATTGTACGATTCCAGAGGTGAGAATGGTGCATCGTCAAACCAAAGAAAATATGGAATCATCATTTTATCCATTTCAGTCGCAAGATTCAGCACTGCATTCAATCATGTATCCAATGTATGGAGATGCTCTACATAATATTGAATGCAATGAGTTGCAATCTTGGTTTGGGGACTATGACTCCCCTCACAAAGTTGTAGAATACAAGCATTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

646

Amino Acids

72.46

Weight (kDa)

4.86

Isoelectric Point (pI)

51.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 9 - 134 2.7e-34 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000639)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020
rosa_chinensis RchiOBHm_Chr1g0324821 RchiOBHm_Chr1g0333801 RchiOBHm_Chr1g0361601 RchiOBHm_Chr1g0361611 RchiOBHm_Chr1g0361661
rosa_laevigata RLG00000027711 RLG00000027712 RLG00000027714 RLG00000027715 RLG00000027716 RLG00000029530 RLG00000029531 RLG00000030172
rosa_multiflora Rmu_co8302323.1_g000001 Rmu_co8459497.1_g000001 Rmu_sc0003426.1_g000013 Rmu_sc0003693.1_g000002 Rmu_sc0003693.1_g000003 Rmu_sc0003704.1_g000001 Rmu_sc0003704.1_g000002 Rmu_sc0006101.1_g000001 Rmu_sc0006101.1_g000010 Rmu_sc0006417.1_g000001 Rmu_sc0006417.1_g000002 Rmu_sc0006417.1_g000005 Rmu_sc0007217.1_g000011 Rmu_sc0010981.1_g000006 Rmu_sc0011258.1_g000006 Rmu_sc0017253.1_g000003 Rmu_sc0017253.1_g000004 Rmu_sc0017750.1_g000001 Rmu_sc0026316.1_g000001 Rmu_sc0038193.1_g000002 Rmu_sc0041549.1_g000001
rosa_roxburghii Rroxscaffold_159G00433000 Rroxscaffold_159G00433050 Rroxscaffold_159G00433080 Rroxscaffold_4G00294830 Rroxscaffold_4G00294840 Rroxscaffold_4G00294900 Rroxscaffold_4G00294910 Rroxscaffold_4G00294920 Rroxscaffold_4G00317230 Rroxscaffold_4G00325170 Rroxscaffold_4G00325200 Rroxscaffold_4G00325280
rosa_rugosa Rorug01G0048000 Rorug01G0111600 Rorug01G0111700 Rorug01G0290200 Rorug01G0290300 Rorug01G0290300 Rorug01G0290400 Rorug01G0290600
rosa_samantha Rh1AG064300 Rh1AG064500 Rh1AG134000 Rh1AG134100 Rh1AG300500 Rh1AG300600
rosa_wichuraiana Rw1G005340 Rw1G005390 Rw1G005420 Rw1G011180 Rw1G011190 Rw1G026650 Rw1G026660 Rw1G026680 Rw1G026690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 443
AccB1I GGYRCC 3 cut(s) 295, 302, 865
AccB7I CCANNNNNTGG 1 cut(s) 1844
AccI GTMKAC 1 cut(s) 902
AccII CGCG 3 cut(s) 205, 863, 1152
AciI CCGC 9 cut(s) 203, 516, 522, 861, 863, 1152, 1250, 1321, 1552
AclWI GGATC 3 cut(s) 740, 821, 1105
AcsI RAATTY 3 cut(s) 415, 568, 1242
AcuI CTGAAG 4 cut(s) 582, 675, 683, 1520
AcyI GRCGYC 1 cut(s) 296
AfaI GTAC 5 cut(s) 191, 218, 461, 646, 1732
AfiI CCNNNNNNNGG 2 cut(s) 1342, 1844
AhlI ACTAGT 1 cut(s) 1012
AjnI CCWGG 5 cut(s) 28, 260, 669, 1081, 1128
AjuI GAANNNNNNNTTGG 2 cut(s) 1175, 1207
Alw26I GTCTC 1 cut(s) 279
AlwI GGATC 3 cut(s) 740, 821, 1105
AlwNI CAGNNNCTG 1 cut(s) 1294
Ama87I CYCGRG 1 cut(s) 408
AoxI GGCC 3 cut(s) 10, 537, 1125
ApeKI GCWGC 4 cut(s) 61, 528, 1049, 1305
ApoI RAATTY 3 cut(s) 415, 568, 1242
AseI ATTAAT 2 cut(s) 792, 1413
Asp700I GAANNNNTTC 3 cut(s) 793, 1272, 1350
AspLEI GCGC 1 cut(s) 298
AspS9I GGNCC 5 cut(s) 10, 258, 280, 330, 1126
AsuC2I CCSGG 1 cut(s) 300
AsuHPI GGTGA 7 cut(s) 885, 1016, 1145, 1389, 1563, 1634, 1756
AvaI CYCGRG 1 cut(s) 408
AvaII GGWCC 3 cut(s) 258, 280, 330
BaeGI GKGCMC 1 cut(s) 305
BanI GGYRCC 3 cut(s) 295, 302, 865
BarI GAAGNNNNNNTAC 2 cut(s) 1665, 1697
BauI CACGAG 2 cut(s) 143, 150
BbsI GAAGAC 2 cut(s) 380, 1434
BbvCI CCTCAGC 1 cut(s) 1287
BbvI GCAGC 4 cut(s) 48, 515, 1036, 1292
BccI CCATC 5 cut(s) 122, 614, 995, 1466, 1507
BceAI ACGGC 2 cut(s) 495, 915
BcgI CGANNNNNNTGC 2 cut(s) 131, 165
BciT130I CCWGG 5 cut(s) 30, 262, 671, 1083, 1130
BciVI GTATCC 2 cut(s) 26, 1845
BclI TGATCA 1 cut(s) 478
BcnI CCSGG 1 cut(s) 300
BcoDI GTCTC 1 cut(s) 279
BcuI ACTAGT 1 cut(s) 1012
BfaI CTAG 3 cut(s) 1013, 1337, 1424
BfmI CTRYAG 5 cut(s) 246, 529, 1050, 1314, 1722
BfoI RGCGCY 1 cut(s) 299
BfuI GTATCC 2 cut(s) 26, 1845
BisI GCNGC 6 cut(s) 62, 529, 864, 1050, 1251, 1306
BlsI GCNGC 6 cut(s) 63, 530, 865, 1051, 1252, 1307
Bme1390I CCNGG 6 cut(s) 30, 262, 300, 671, 1083, 1130
Bme18I GGWCC 3 cut(s) 258, 280, 330
BmeT110I CYCGRG 1 cut(s) 408
BmgT120I GGNCC 5 cut(s) 10, 258, 280, 330, 1126
BmiI GGNNCC 6 cut(s) 11, 259, 297, 304, 867, 1212
BmrFI CCNGG 6 cut(s) 30, 262, 300, 671, 1083, 1130
BmsI GCATC 8 cut(s) 481, 584, 682, 886, 1340, 1594, 1765, 1840
BpiI GAAGAC 2 cut(s) 380, 1434
Bpu10I CCTNAGC 1 cut(s) 1287
BpuMI CCSGG 1 cut(s) 300
BsaBI GATNNNNATC 2 cut(s) 1113, 1608
BsaHI GRCGYC 1 cut(s) 296
BsaJI CCNNGG 4 cut(s) 730, 861, 1128, 1129
BsaWI WCCGGW 1 cut(s) 1213
BsaXI ACNNNNNCTCC 6 cut(s) 1292, 1322, 1541, 1571, 1889, 1919
Bsc4I CCNNNNNNNGG 2 cut(s) 1342, 1844
Bse118I RCCGGY 1 cut(s) 377
Bse1I ACTGG 3 cut(s) 640, 896, 1685
Bse3DI GCAATG 3 cut(s) 622, 1879, 1933
Bse8I GATNNNNATC 2 cut(s) 1113, 1608
BseBI CCWGG 5 cut(s) 30, 262, 671, 1083, 1130
BseDI CCNNGG 4 cut(s) 730, 861, 1128, 1129
BseGI GGATG 7 cut(s) 117, 496, 575, 853, 1303, 1331, 1477
BseJI GATNNNNATC 2 cut(s) 1113, 1608
BseLI CCNNNNNNNGG 2 cut(s) 1342, 1844
BseMI GCAATG 3 cut(s) 622, 1879, 1933
BseMII CTCAG 2 cut(s) 56, 1301
BseNI ACTGG 3 cut(s) 640, 896, 1685
BseRI GAGGAG 2 cut(s) 71, 1300
BseSI GKGCMC 1 cut(s) 305
BseXI GCAGC 4 cut(s) 48, 515, 1036, 1292
BseYI CCCAGC 4 cut(s) 6, 381, 685, 1588
BsgI GTGCAG 1 cut(s) 1242
Bsh1236I CGCG 3 cut(s) 205, 863, 1152
BshFI GGCC 3 cut(s) 12, 539, 1127
BshNI GGYRCC 3 cut(s) 295, 302, 865
BsiHKCI CYCGRG 1 cut(s) 408
BsiSI CCGG 3 cut(s) 299, 378, 1214
BslFI GGGAC 3 cut(s) 30, 449, 1910
BslI CCNNNNNNNGG 2 cut(s) 1342, 1844
BsmAI GTCTC 1 cut(s) 279
BsmFI GGGAC 3 cut(s) 30, 449, 1910
BsmI GAATGC 4 cut(s) 932, 1631, 1822, 1874
BsnI GGCC 3 cut(s) 12, 539, 1127
BsoBI CYCGRG 1 cut(s) 408
Bsp1286I GDGCHC 1 cut(s) 305
Bsp143I GATC 4 cut(s) 478, 745, 826, 1097
BspACI CCGC 9 cut(s) 203, 516, 522, 861, 863, 1152, 1250, 1321, 1552
BspANI GGCC 3 cut(s) 12, 539, 1127
BspCNI CTCAG 2 cut(s) 57, 1300
BspFNI CGCG 3 cut(s) 205, 863, 1152
BspHI TCATGA 2 cut(s) 391, 484
BspLI GGNNCC 6 cut(s) 11, 259, 297, 304, 867, 1212
BspMAI CTGCAG 3 cut(s) 533, 1054, 1318
BspPI GGATC 3 cut(s) 740, 821, 1105
BspQI GCTCTTC 2 cut(s) 702, 807
BspT107I GGYRCC 3 cut(s) 295, 302, 865
BsrDI GCAATG 3 cut(s) 622, 1879, 1933
BsrFI RCCGGY 1 cut(s) 377
BsrI ACTGG 3 cut(s) 640, 896, 1685
BssAI RCCGGY 1 cut(s) 377
BssECI CCNNGG 4 cut(s) 730, 861, 1128, 1129
BssMI GATC 4 cut(s) 478, 745, 826, 1097
BssNAI GTATAC 1 cut(s) 903
BssNI GRCGYC 1 cut(s) 296
BssSI CACGAG 2 cut(s) 143, 150
BssT1I CCWWGG 1 cut(s) 730
Bst1107I GTATAC 1 cut(s) 903
Bst2BI CACGAG 2 cut(s) 143, 150
Bst2UI CCWGG 5 cut(s) 30, 262, 671, 1083, 1130
Bst4CI ACNGT 2 cut(s) 22, 1569
Bst6I CTCTTC 3 cut(s) 702, 807, 970
BstACI GRCGYC 1 cut(s) 296
BstC8I GCNNGC 4 cut(s) 140, 737, 1125, 1359
BstDEI CTNAG 2 cut(s) 65, 1287
BstDSI CCRYGG 1 cut(s) 861
BstF5I GGATG 7 cut(s) 117, 496, 575, 853, 1303, 1331, 1477
BstFNI CGCG 3 cut(s) 205, 863, 1152
BstH2I RGCGCY 1 cut(s) 299
BstHHI GCGC 1 cut(s) 298
BstKTI GATC 4 cut(s) 481, 748, 829, 1100
BstMAI GTCTC 1 cut(s) 279
BstMBI GATC 4 cut(s) 478, 745, 826, 1097
BstMWI GCNNNNNNNGC 3 cut(s) 154, 528, 557
BstNI CCWGG 5 cut(s) 30, 262, 671, 1083, 1130
BstSCI CCNGG 6 cut(s) 28, 260, 298, 669, 1081, 1128
BstSFI CTRYAG 5 cut(s) 246, 529, 1050, 1314, 1722
BstSLI GKGCMC 1 cut(s) 305
BstUI CGCG 3 cut(s) 205, 863, 1152
BstV1I GCAGC 4 cut(s) 48, 515, 1036, 1292
BstV2I GAAGAC 2 cut(s) 380, 1434
BstX2I RGATCY 1 cut(s) 1097
BstXI CCANNNNNNTGG 1 cut(s) 168
BstYI RGATCY 1 cut(s) 1097
BstZ17I GTATAC 1 cut(s) 903
BsuI GTATCC 2 cut(s) 26, 1845
BsuRI GGCC 3 cut(s) 12, 539, 1127
BtgI CCRYGG 1 cut(s) 861
BtsCI GGATG 7 cut(s) 117, 496, 575, 853, 1303, 1331, 1477
BtsI GCAGTG 2 cut(s) 1323, 1817
BtsIMutI CAGTG 4 cut(s) 48, 903, 1323, 1817
Cac8I GCNNGC 4 cut(s) 140, 737, 1125, 1359
CaiI CAGNNNCTG 1 cut(s) 1294
CciI TCATGA 2 cut(s) 391, 484
CfoI GCGC 1 cut(s) 298
Cfr10I RCCGGY 1 cut(s) 377
Cfr13I GGNCC 5 cut(s) 10, 258, 280, 330, 1126
Cfr42I CCGCGG 1 cut(s) 864
Csp6I GTAC 5 cut(s) 190, 217, 460, 645, 1731
CviAII CATG 6 cut(s) 109, 392, 485, 722, 1699, 1831
CviQI GTAC 5 cut(s) 190, 217, 460, 645, 1731
DdeI CTNAG 2 cut(s) 65, 1287
DinI GGCGCC 1 cut(s) 297
DpnI GATC 4 cut(s) 480, 747, 828, 1099
DpnII GATC 4 cut(s) 478, 745, 826, 1097
DrdI GACNNNNNNGTC 1 cut(s) 443
DseDI GACNNNNNNGTC 1 cut(s) 443
Eam1104I CTCTTC 3 cut(s) 702, 807, 970
EarI CTCTTC 3 cut(s) 702, 807, 970
Eco130I CCWWGG 1 cut(s) 730
Eco47I GGWCC 3 cut(s) 258, 280, 330
Eco57I CTGAAG 4 cut(s) 582, 675, 683, 1520
Eco88I CYCGRG 1 cut(s) 408
EcoO109I RGGNCCY 3 cut(s) 10, 258, 330
EcoRII CCWGG 5 cut(s) 28, 260, 669, 1081, 1128
EcoT14I CCWWGG 1 cut(s) 730
EgeI GGCGCC 1 cut(s) 297
EheI GGCGCC 1 cut(s) 297
ErhI CCWWGG 1 cut(s) 730
FaeI CATG 6 cut(s) 112, 395, 488, 725, 1702, 1834
FalI AAGNNNNNCTT 6 cut(s) 176, 208, 317, 349, 1643, 1675
FaqI GGGAC 3 cut(s) 30, 449, 1910
FatI CATG 6 cut(s) 108, 391, 484, 721, 1698, 1830
FauI CCCGC 2 cut(s) 868, 1145
FbaI TGATCA 1 cut(s) 478
FblI GTMKAC 1 cut(s) 902
Fnu4HI GCNGC 6 cut(s) 62, 529, 864, 1050, 1251, 1306
FokI GGATG 7 cut(s) 104, 503, 562, 840, 1310, 1318, 1484
Fsp4HI GCNGC 6 cut(s) 62, 529, 864, 1050, 1251, 1306
FspBI CTAG 3 cut(s) 1013, 1337, 1424
GlaI GCGC 1 cut(s) 297
GluI GCNGC 6 cut(s) 62, 529, 864, 1050, 1251, 1306
GsaI CCCAGC 4 cut(s) 10, 385, 689, 1592
HaeII RGCGCY 1 cut(s) 299
HaeIII GGCC 3 cut(s) 12, 539, 1127
HapII CCGG 3 cut(s) 299, 378, 1214
HhaI GCGC 1 cut(s) 298
Hin1I GRCGYC 1 cut(s) 296
Hin1II CATG 6 cut(s) 112, 395, 488, 725, 1702, 1834
Hin6I GCGC 1 cut(s) 296
HinP1I GCGC 1 cut(s) 296
HincII GTYRAC 1 cut(s) 1678
HindII GTYRAC 1 cut(s) 1678
HpaII CCGG 3 cut(s) 299, 378, 1214
HphI GGTGA 7 cut(s) 885, 1016, 1145, 1389, 1563, 1634, 1756
Hpy166II GTNNAC 3 cut(s) 903, 1532, 1678
Hpy8I GTNNAC 3 cut(s) 903, 1532, 1678
HpyAV CCTTC 6 cut(s) 248, 259, 349, 767, 1177, 1199
HpyCH4III ACNGT 2 cut(s) 22, 1569
HpyCH4IV ACGT 1 cut(s) 352
HpyF10VI GCNNNNNNNGC 3 cut(s) 154, 528, 557
HpyF3I CTNAG 2 cut(s) 65, 1287
HpySE526I ACGT 1 cut(s) 352
Hsp92I GRCGYC 1 cut(s) 296
Hsp92II CATG 6 cut(s) 112, 395, 488, 725, 1702, 1834
HspAI GCGC 1 cut(s) 296
KasI GGCGCC 1 cut(s) 295
Ksp22I TGATCA 1 cut(s) 478
KspI CCGCGG 1 cut(s) 864
Kzo9I GATC 4 cut(s) 478, 745, 826, 1097
LguI GCTCTTC 2 cut(s) 702, 807
LmnI GCTCC 5 cut(s) 58, 205, 239, 1085, 1313
Lsp1109I GCAGC 4 cut(s) 48, 515, 1036, 1292
LweI GCATC 8 cut(s) 481, 584, 682, 886, 1340, 1594, 1765, 1840
MaeI CTAG 3 cut(s) 1013, 1337, 1424
MaeII ACGT 1 cut(s) 352
MaeIII GTNAC 8 cut(s) 68, 268, 891, 1133, 1159, 1382, 1493, 1569
MalI GATC 4 cut(s) 480, 747, 828, 1099
MboI GATC 4 cut(s) 478, 745, 826, 1097
MflI RGATCY 1 cut(s) 1097
MhlI GDGCHC 1 cut(s) 305
Mly113I GGCGCC 1 cut(s) 296
MlyI GAGTC 3 cut(s) 92, 173, 1898
MmeI TCCRAC 1 cut(s) 261
MroXI GAANNNNTTC 3 cut(s) 793, 1272, 1350
MseI TTAA 5 cut(s) 348, 678, 792, 1413, 1650
MslI CAYNNNNRTG 4 cut(s) 489, 921, 1260, 1489
MspA1I CMGCKG 2 cut(s) 863, 1305
MspI CCGG 3 cut(s) 299, 378, 1214
MspR9I CCNGG 6 cut(s) 30, 262, 300, 671, 1083, 1130
Mva1269I GAATGC 4 cut(s) 932, 1631, 1822, 1874
MvaI CCWGG 5 cut(s) 30, 262, 671, 1083, 1130
MvnI CGCG 3 cut(s) 205, 863, 1152
MwoI GCNNNNNNNGC 3 cut(s) 154, 528, 557
NarI GGCGCC 1 cut(s) 296
NciI CCSGG 1 cut(s) 300
NdeII GATC 4 cut(s) 478, 745, 826, 1097
NlaIII CATG 6 cut(s) 112, 395, 488, 725, 1702, 1834
NlaIV GGNNCC 6 cut(s) 11, 259, 297, 304, 867, 1212
NmuCI GTSAC 7 cut(s) 68, 268, 891, 1133, 1159, 1493, 1569
PagI TCATGA 2 cut(s) 391, 484
PasI CCCWGGG 1 cut(s) 1129
PciSI GCTCTTC 2 cut(s) 702, 807
PctI GAATGC 4 cut(s) 932, 1631, 1822, 1874
PdmI GAANNNNTTC 3 cut(s) 793, 1272, 1350
PflMI CCANNNNNTGG 1 cut(s) 1844
PfoI TCCNGGA 1 cut(s) 260
PkrI GCNGC 6 cut(s) 63, 530, 865, 1051, 1252, 1307
PleI GAGTC 3 cut(s) 92, 172, 1898
PluTI GGCGCC 1 cut(s) 299
PpsI GAGTC 3 cut(s) 92, 172, 1898
PpuMI RGGWCCY 2 cut(s) 258, 330
PshBI ATTAAT 2 cut(s) 792, 1413
Psp5II RGGWCCY 2 cut(s) 258, 330
Psp6I CCWGG 5 cut(s) 28, 260, 669, 1081, 1128
PspFI CCCAGC 4 cut(s) 6, 381, 685, 1588
PspGI CCWGG 5 cut(s) 28, 260, 669, 1081, 1128
PspN4I GGNNCC 6 cut(s) 11, 259, 297, 304, 867, 1212
PspPI GGNCC 5 cut(s) 10, 258, 280, 330, 1126
PspPPI RGGWCCY 2 cut(s) 258, 330
PstI CTGCAG 3 cut(s) 533, 1054, 1318
PstNI CAGNNNCTG 1 cut(s) 1294
PsuI RGATCY 1 cut(s) 1097
PvuII CAGCTG 1 cut(s) 1305
RsaI GTAC 5 cut(s) 191, 218, 461, 646, 1732
RsaNI GTAC 5 cut(s) 190, 217, 460, 645, 1731
RseI CAYNNNNRTG 4 cut(s) 489, 921, 1260, 1489
SacII CCGCGG 1 cut(s) 864
SapI GCTCTTC 2 cut(s) 702, 807
SaqAI TTAA 5 cut(s) 348, 678, 792, 1413, 1650
SatI GCNGC 6 cut(s) 62, 529, 864, 1050, 1251, 1306
Sau3AI GATC 4 cut(s) 478, 745, 826, 1097
Sau96I GGNCC 5 cut(s) 10, 258, 280, 330, 1126
SchI GAGTC 3 cut(s) 92, 173, 1898
ScrFI CCNGG 6 cut(s) 30, 262, 300, 671, 1083, 1130
SduI GDGCHC 1 cut(s) 305
SfaNI GCATC 8 cut(s) 481, 584, 682, 886, 1340, 1594, 1765, 1840
SfcI CTRYAG 5 cut(s) 246, 529, 1050, 1314, 1722
SfoI GGCGCC 1 cut(s) 297
Sfr303I CCGCGG 1 cut(s) 864
SgrBI CCGCGG 1 cut(s) 864
SinI GGWCC 3 cut(s) 258, 280, 330
SmiMI CAYNNNNRTG 4 cut(s) 489, 921, 1260, 1489
SpeI ACTAGT 1 cut(s) 1012
SsiI CCGC 9 cut(s) 203, 516, 522, 861, 863, 1152, 1250, 1321, 1552
SspDI GGCGCC 1 cut(s) 295
SspI AATATT 2 cut(s) 988, 1864
SspMI CTAG 3 cut(s) 1013, 1337, 1424
StyD4I CCNGG 6 cut(s) 28, 260, 298, 669, 1081, 1128
StyI CCWWGG 1 cut(s) 730
TaaI ACNGT 2 cut(s) 22, 1569
TaiI ACGT 1 cut(s) 355
TaqI TCGA 3 cut(s) 129, 761, 1515
TaqII GACCGA 1 cut(s) 297
TatI WGTACW 1 cut(s) 459
TauI GCSGC 2 cut(s) 866, 1253
Tru1I TTAA 5 cut(s) 348, 678, 792, 1413, 1650
Tru9I TTAA 5 cut(s) 348, 678, 792, 1413, 1650
TscAI CASTG 4 cut(s) 55, 903, 1323, 1824
TseFI GTSAC 7 cut(s) 68, 268, 891, 1133, 1159, 1493, 1569
TseI GCWGC 4 cut(s) 61, 528, 1049, 1305
Tsp45I GTSAC 7 cut(s) 68, 268, 891, 1133, 1159, 1493, 1569
TspGWI ACGGA 2 cut(s) 32, 738
TspRI CASTG 4 cut(s) 55, 903, 1323, 1824
Van91I CCANNNNNTGG 1 cut(s) 1844
VpaK11BI GGWCC 3 cut(s) 258, 280, 330
VspI ATTAAT 2 cut(s) 792, 1413
XapI RAATTY 3 cut(s) 415, 568, 1242
XbaI TCTAGA 1 cut(s) 1423
XcmI CCANNNNNNNNNTGG 1 cut(s) 1774
XmiI GTMKAC 1 cut(s) 902
XmnI GAANNNNTTC 3 cut(s) 793, 1272, 1350
XspI CTAG 3 cut(s) 1013, 1337, 1424
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.