Rroxscaffold_4G00294830
NAC Family

(NAC) domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000639
Physical Location & Seq
Forward (+)
14788505 .. 14790957
2453 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00294830.1

Sequence Viewer

Length: 1539 bp
ATGAGCTGCGAAATTTTCTCAATTCCACCGGAATACCGATTCCGTCCCACCAAAAAGGAGCTACTGTGTGACCACTTGGAGAAGAAGAATCAGTACAAGGACTCCCAAGGCATGTCCATCATCCCTGTAATCGATCTGTGCAAGCACGAGCCTCATGAGCTACCAGGACTGGCGTTCACAGGGCAGGAAAATCTGGGGAGGAAACTTTTCTTCTTTTTCTTCTTTTGGTTTACAAGGGCACAGTCTTGGGATAGTCAGGGCAAGTGGTACTTCTTCGCTCCGCGTGATTACAAGTACCCTAACAGCAGTACTCGCTCCAACAGGACTACAGGGGAAGGGTCCTGGAAGGTCACAGGCAAGGACAAAGACATCAAGGCCCCGGGCTCCGAAGCTGTGATTGGAAGAAAGAGGATCTTGACCTTCCAAAAACGTGGAGTACCGAAATCCCACAAGAGCGGCTGGGTTATTCATGAGTATTATCACATTCAGCCCCATTCTGACCCTCCTAAGCAGATAGGGGACTTTGTTGTTTGTTGCTTGAAGTACAAGTCAGACAACTCTGATCATGTTGAGGATGCACCATTCTGCAATCGAGGTAGCGGTAGCGGTAGCTGCAGTATGGTTTCCGATGTTGCAAATCAGCTGGTTGAAGAAAATTTGGCGTCCAATGAGCAGTTTAATGGCACTGATGATGAAGCTGAAACTGGTGGCGGTAGGATTACTGAAGCAGAAGAATATCTGGCATATAAGAAGCTGAGAGATGAGCTTCGGATTCCCATCGGAAATCAGAATGAATTCCAAGGCACGCAAACTGATCCTTGTAAGCTTTGGACCTCTGTTGAAGGTCAAGCTGATAGAAGCAATTCGTCTCATATGAATGAAGAGCGACTGGATGATCCAGAAAATATGGATTCATTCTTTCATACACCTGCGCCCCCTCAACTGCATCAGCTACATCAGTCACCGATGAATACCACCAATGTCCATAATGATGAATGCCGTAAGAGGAAATATCCATTTGAAGATAATGACTCTTCTCTTACGAAGAAGAACAATATTTCAACCAATGATGGTGATGAACTAGTCAGCAACACCACATCTAATTCTGAAAACCAAGCTACAGATGTGATCCTAGAGGGTGACTCTGTTATCTGTCGCTTGAAGAATAAATCAGATAAGAAGGATTCTCTTGTAAGTGATGAAGGCGAACCGGATAGCACGGGTGTGTCTAATTGGAAAATTCAGGCGGTTCAGGCACTCAAAAATGATGAACCACTTTTTCATCAACCTCAGCCTCTGGATGACTGCTGCTCCTCTGCAGTGTGGACATCCTTAGAGCTGGAAGCTGTTCTGCAAGCCATTGGCACTACTGATGATTGTAATAAGTTGCAATCACCATGTGGAGATAATACTTCTTGTCTAGAAGACAAGAATGAAGTTTCAACCTGTGATGAAGATGAGAATATGGATGGTGTGTTTCCACAGGATTCTAGAGGTGAGAATGGTATGCTATATGAAATTATTCTCAACCGAGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

512

Amino Acids

57.84

Weight (kDa)

4.93

Isoelectric Point (pI)

44.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 9 - 72 1.1e-09 No apical meristem (NAM) protein
NAM PF02365 85 - 159 1.5e-17 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000639)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020
rosa_chinensis RchiOBHm_Chr1g0324821 RchiOBHm_Chr1g0333801 RchiOBHm_Chr1g0361601 RchiOBHm_Chr1g0361611 RchiOBHm_Chr1g0361661
rosa_laevigata RLG00000027711 RLG00000027712 RLG00000027714 RLG00000027715 RLG00000027716 RLG00000029530 RLG00000029531 RLG00000030172
rosa_multiflora Rmu_co8302323.1_g000001 Rmu_co8459497.1_g000001 Rmu_sc0003426.1_g000013 Rmu_sc0003693.1_g000002 Rmu_sc0003693.1_g000003 Rmu_sc0003704.1_g000001 Rmu_sc0003704.1_g000002 Rmu_sc0006101.1_g000001 Rmu_sc0006101.1_g000010 Rmu_sc0006417.1_g000001 Rmu_sc0006417.1_g000002 Rmu_sc0006417.1_g000005 Rmu_sc0007217.1_g000011 Rmu_sc0010981.1_g000006 Rmu_sc0011258.1_g000006 Rmu_sc0017253.1_g000003 Rmu_sc0017253.1_g000004 Rmu_sc0017750.1_g000001 Rmu_sc0026316.1_g000001 Rmu_sc0038193.1_g000002 Rmu_sc0041549.1_g000001
rosa_roxburghii Rroxscaffold_159G00433000 Rroxscaffold_159G00433050 Rroxscaffold_159G00433080 Rroxscaffold_4G00294830 Rroxscaffold_4G00294840 Rroxscaffold_4G00294900 Rroxscaffold_4G00294910 Rroxscaffold_4G00294920 Rroxscaffold_4G00317230 Rroxscaffold_4G00325170 Rroxscaffold_4G00325200 Rroxscaffold_4G00325280
rosa_rugosa Rorug01G0048000 Rorug01G0111600 Rorug01G0111700 Rorug01G0290200 Rorug01G0290300 Rorug01G0290300 Rorug01G0290400 Rorug01G0290600
rosa_samantha Rh1AG064300 Rh1AG064500 Rh1AG134000 Rh1AG134100 Rh1AG300500 Rh1AG300600
rosa_wichuraiana Rw1G005340 Rw1G005390 Rw1G005420 Rw1G011180 Rw1G011190 Rw1G026650 Rw1G026660 Rw1G026680 Rw1G026690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 937
Acc36I ACCTGC 1 cut(s) 937
AccBSI CCGCTC 1 cut(s) 456
AccII CGCG 1 cut(s) 283
AciI CCGC 6 cut(s) 281, 456, 600, 606, 711, 1247
AclWI GGATC 4 cut(s) 419, 809, 890, 1123
AcsI RAATTY 4 cut(s) 12, 655, 794, 1239
AcuI CTGAAG 1 cut(s) 744
AcyI GRCGYC 1 cut(s) 662
AdeI CACNNNGTG 1 cut(s) 1400
AfaI GTAC 6 cut(s) 95, 269, 296, 310, 438, 545
AgsI TTSAA 7 cut(s) 541, 650, 842, 1022, 1062, 1162, 1443
AhlI ACTAGT 1 cut(s) 1081
AjnI CCWGG 2 cut(s) 163, 341
AjuI GAANNNNNNNTTGG 2 cut(s) 381, 413
AleI CACNNNNGTG 1 cut(s) 1223
Alw26I GTCTC 1 cut(s) 873
AlwI GGATC 4 cut(s) 419, 809, 890, 1123
AlwNI CAGNNNCTG 1 cut(s) 1297
Ama87I CYCGRG 1 cut(s) 379
AoxI GGCC 1 cut(s) 375
ApeKI GCWGC 3 cut(s) 6, 612, 1308
ApoI RAATTY 4 cut(s) 12, 655, 794, 1239
Asp700I GAANNNNTTC 5 cut(s) 206, 794, 862, 1347, 1521
AspLEI GCGC 1 cut(s) 934
AspS9I GGNCC 3 cut(s) 339, 376, 831
AsuC2I CCSGG 2 cut(s) 380, 381
AsuHPI GGTGA 5 cut(s) 954, 1085, 1151, 1386, 1508
AvaI CYCGRG 1 cut(s) 379
AvaII GGWCC 2 cut(s) 339, 831
BaeGI GKGCMC 1 cut(s) 241
BanII GRGCYC 1 cut(s) 386
BarI GAAGNNNNNNTAC 2 cut(s) 77, 109
BauI CACGAG 1 cut(s) 146
BbsI GAAGAC 1 cut(s) 1431
BbvCI CCTCAGC 1 cut(s) 1290
BbvI GCAGC 2 cut(s) 599, 1295
BccI CCATC 4 cut(s) 125, 785, 1064, 1463
BceAI ACGGC 1 cut(s) 984
BciT130I CCWGG 2 cut(s) 165, 343
BclI TGATCA 1 cut(s) 562
BcnI CCSGG 2 cut(s) 380, 381
BcoDI GTCTC 1 cut(s) 873
BcuI ACTAGT 1 cut(s) 1081
BfaI CTAG 4 cut(s) 1082, 1133, 1421, 1491
BfmI CTRYAG 4 cut(s) 327, 613, 1119, 1317
BfuAI ACCTGC 1 cut(s) 937
BisI GCNGC 4 cut(s) 7, 457, 613, 1309
BlsI GCNGC 4 cut(s) 8, 458, 614, 1310
BmcAI AGTACT 1 cut(s) 310
Bme1390I CCNGG 4 cut(s) 165, 343, 380, 381
Bme18I GGWCC 2 cut(s) 339, 831
BmeT110I CYCGRG 1 cut(s) 379
BmgT120I GGNCC 3 cut(s) 339, 376, 831
BmiI GGNNCC 3 cut(s) 340, 378, 385
BmrFI CCNGG 4 cut(s) 165, 343, 380, 381
BmsI GCATC 2 cut(s) 565, 955
BpiI GAAGAC 1 cut(s) 1431
BplI GAGNNNNNCTC 2 cut(s) 1127, 1159
Bpu10I CCTNAGC 2 cut(s) 507, 1290
BpuMI CCSGG 2 cut(s) 380, 381
Bsa29I ATCGAT 1 cut(s) 132
BsaBI GATNNNNATC 1 cut(s) 776
BsaHI GRCGYC 1 cut(s) 662
BsaJI CCNNGG 4 cut(s) 106, 378, 379, 799
BsaWI WCCGGW 2 cut(s) 28, 1210
BsaXI ACNNNNNCTCC 6 cut(s) 50, 80, 86, 116, 1295, 1325
Bse1I ACTGG 3 cut(s) 174, 709, 894
Bse8I GATNNNNATC 1 cut(s) 776
BseBI CCWGG 2 cut(s) 165, 343
BseCI ATCGAT 1 cut(s) 132
BseDI CCNNGG 4 cut(s) 106, 378, 379, 799
BseGI GGATG 6 cut(s) 120, 580, 898, 1306, 1328, 1474
BseJI GATNNNNATC 1 cut(s) 776
BseMII CTCAG 2 cut(s) 746, 1304
BseNI ACTGG 3 cut(s) 174, 709, 894
BseRI GAGGAG 1 cut(s) 1303
BseSI GKGCMC 1 cut(s) 241
BseXI GCAGC 2 cut(s) 599, 1295
BseYI CCCAGC 1 cut(s) 459
Bsh1236I CGCG 1 cut(s) 283
BshFI GGCC 1 cut(s) 377
BshVI ATCGAT 1 cut(s) 132
BsiHKCI CYCGRG 1 cut(s) 379
BsiSI CCGG 3 cut(s) 29, 380, 1211
BslFI GGGAC 2 cut(s) 30, 533
BsmAI GTCTC 1 cut(s) 873
BsmBI CGTCTC 1 cut(s) 873
BsmFI GGGAC 2 cut(s) 30, 533
BsmI GAATGC 1 cut(s) 1001
BsnI GGCC 1 cut(s) 377
BsoBI CYCGRG 1 cut(s) 379
Bsp1286I GDGCHC 2 cut(s) 241, 386
Bsp143I GATC 6 cut(s) 133, 411, 562, 814, 895, 1128
BspACI CCGC 6 cut(s) 281, 456, 600, 606, 711, 1247
BspANI GGCC 1 cut(s) 377
BspCNI CTCAG 2 cut(s) 747, 1303
BspDI ATCGAT 1 cut(s) 132
BspFNI CGCG 1 cut(s) 283
BspHI TCATGA 2 cut(s) 154, 469
BspLI GGNNCC 3 cut(s) 340, 378, 385
BspMAI CTGCAG 2 cut(s) 617, 1321
BspMI ACCTGC 1 cut(s) 937
BspPI GGATC 4 cut(s) 419, 809, 890, 1123
BspQI GCTCTTC 1 cut(s) 876
BsrBI CCGCTC 1 cut(s) 456
BsrI ACTGG 3 cut(s) 174, 709, 894
BssECI CCNNGG 4 cut(s) 106, 378, 379, 799
BssMI GATC 6 cut(s) 133, 411, 562, 814, 895, 1128
BssNI GRCGYC 1 cut(s) 662
BssSI CACGAG 1 cut(s) 146
BssT1I CCWWGG 2 cut(s) 106, 799
Bst2BI CACGAG 1 cut(s) 146
Bst2UI CCWGG 2 cut(s) 165, 343
Bst4CI ACNGT 2 cut(s) 66, 243
Bst6I CTCTTC 2 cut(s) 876, 1039
BstACI GRCGYC 1 cut(s) 662
BstC8I GCNNGC 3 cut(s) 143, 806, 1356
BstDEI CTNAG 4 cut(s) 507, 755, 1290, 1333
BstF5I GGATG 6 cut(s) 120, 580, 898, 1306, 1328, 1474
BstFNI CGCG 1 cut(s) 283
BstHHI GCGC 1 cut(s) 934
BstKTI GATC 6 cut(s) 136, 414, 565, 817, 898, 1131
BstMAI GTCTC 1 cut(s) 873
BstMBI GATC 6 cut(s) 133, 411, 562, 814, 895, 1128
BstMWI GCNNNNNNNGC 4 cut(s) 157, 312, 612, 1253
BstNI CCWGG 2 cut(s) 165, 343
BstNSI RCATGY 1 cut(s) 115
BstSCI CCNGG 4 cut(s) 163, 341, 378, 379
BstSFI CTRYAG 4 cut(s) 327, 613, 1119, 1317
BstSLI GKGCMC 1 cut(s) 241
BstUI CGCG 1 cut(s) 283
BstV1I GCAGC 2 cut(s) 599, 1295
BstV2I GAAGAC 1 cut(s) 1431
BstX2I RGATCY 1 cut(s) 411
BstXI CCANNNNNNTGG 1 cut(s) 431
BstYI RGATCY 1 cut(s) 411
Bsu15I ATCGAT 1 cut(s) 132
BsuRI GGCC 1 cut(s) 377
BsuTUI ATCGAT 1 cut(s) 132
BtsCI GGATG 6 cut(s) 120, 580, 898, 1306, 1328, 1474
BtsI GCAGTG 1 cut(s) 1326
BtsIMutI CAGTG 2 cut(s) 684, 1326
BveI ACCTGC 1 cut(s) 937
Cac8I GCNNGC 3 cut(s) 143, 806, 1356
CaiI CAGNNNCTG 1 cut(s) 1297
CciI TCATGA 2 cut(s) 154, 469
CfoI GCGC 1 cut(s) 934
Cfr13I GGNCC 3 cut(s) 339, 376, 831
Cfr9I CCCGGG 1 cut(s) 379
ClaI ATCGAT 1 cut(s) 132
CseI GACGC 1 cut(s) 651
Csp6I GTAC 6 cut(s) 94, 268, 295, 309, 437, 544
CviAII CATG 5 cut(s) 112, 155, 470, 566, 1398
CviQI GTAC 6 cut(s) 94, 268, 295, 309, 437, 544
DdeI CTNAG 4 cut(s) 507, 755, 1290, 1333
DpnI GATC 6 cut(s) 135, 413, 564, 816, 897, 1130
DpnII GATC 6 cut(s) 133, 411, 562, 814, 895, 1128
DraIII CACNNNGTG 1 cut(s) 1400
Eam1104I CTCTTC 2 cut(s) 876, 1039
EarI CTCTTC 2 cut(s) 876, 1039
Eco130I CCWWGG 2 cut(s) 106, 799
Eco24I GRGCYC 1 cut(s) 386
Eco47I GGWCC 2 cut(s) 339, 831
Eco57I CTGAAG 1 cut(s) 744
Eco88I CYCGRG 1 cut(s) 379
EcoO109I RGGNCCY 2 cut(s) 339, 376
EcoRI GAATTC 1 cut(s) 794
EcoRII CCWGG 2 cut(s) 163, 341
EcoT14I CCWWGG 2 cut(s) 106, 799
EcoT38I GRGCYC 1 cut(s) 386
ErhI CCWWGG 2 cut(s) 106, 799
Esp3I CGTCTC 1 cut(s) 873
FaeI CATG 5 cut(s) 115, 158, 473, 569, 1401
FalI AAGNNNNNCTT 4 cut(s) 254, 286, 398, 430
FaqI GGGAC 2 cut(s) 30, 533
FatI CATG 5 cut(s) 111, 154, 469, 565, 1397
FauNDI CATATG 1 cut(s) 873
FbaI TGATCA 1 cut(s) 562
Fnu4HI GCNGC 4 cut(s) 7, 457, 613, 1309
FokI GGATG 6 cut(s) 107, 587, 905, 1313, 1315, 1481
FriOI GRGCYC 1 cut(s) 386
Fsp4HI GCNGC 4 cut(s) 7, 457, 613, 1309
FspBI CTAG 4 cut(s) 1082, 1133, 1421, 1491
GlaI GCGC 1 cut(s) 933
GluI GCNGC 4 cut(s) 7, 457, 613, 1309
GsaI CCCAGC 1 cut(s) 463
HaeIII GGCC 1 cut(s) 377
HapII CCGG 3 cut(s) 29, 380, 1211
HgaI GACGC 1 cut(s) 651
HhaI GCGC 1 cut(s) 934
Hin1I GRCGYC 1 cut(s) 662
Hin1II CATG 5 cut(s) 115, 158, 473, 569, 1401
Hin6I GCGC 1 cut(s) 932
HinP1I GCGC 1 cut(s) 932
HindIII AAGCTT 1 cut(s) 824
HinfI GANTC 9 cut(s) 39, 88, 101, 772, 911, 1031, 1142, 1184, 1487
HpaII CCGG 3 cut(s) 29, 380, 1211
HphI GGTGA 5 cut(s) 954, 1085, 1151, 1386, 1508
Hpy166II GTNNAC 3 cut(s) 177, 231, 1326
Hpy188III TCNNGA 7 cut(s) 155, 415, 470, 899, 1298, 1421, 1491
Hpy8I GTNNAC 3 cut(s) 177, 231, 1326
HpyAV CCTTC 6 cut(s) 329, 340, 430, 836, 1174, 1196
HpyCH4III ACNGT 2 cut(s) 66, 243
HpyCH4IV ACGT 1 cut(s) 430
HpyCH4V TGCA 9 cut(s) 141, 578, 588, 615, 635, 946, 1319, 1354, 1390
HpyF10VI GCNNNNNNNGC 4 cut(s) 157, 312, 612, 1253
HpyF3I CTNAG 4 cut(s) 507, 755, 1290, 1333
HpySE526I ACGT 1 cut(s) 430
Hsp92I GRCGYC 1 cut(s) 662
Hsp92II CATG 5 cut(s) 115, 158, 473, 569, 1401
HspAI GCGC 1 cut(s) 932
Ksp22I TGATCA 1 cut(s) 562
Kzo9I GATC 6 cut(s) 133, 411, 562, 814, 895, 1128
LguI GCTCTTC 1 cut(s) 876
LmnI GCTCC 5 cut(s) 58, 283, 320, 389, 1316
Lsp1109I GCAGC 2 cut(s) 599, 1295
LweI GCATC 2 cut(s) 565, 955
MaeI CTAG 4 cut(s) 1082, 1133, 1421, 1491
MaeII ACGT 1 cut(s) 430
MaeIII GTNAC 4 cut(s) 68, 349, 960, 1139
MalI GATC 6 cut(s) 135, 413, 564, 816, 897, 1130
MbiI CCGCTC 1 cut(s) 456
MboI GATC 6 cut(s) 133, 411, 562, 814, 895, 1128
MflI RGATCY 1 cut(s) 411
MhlI GDGCHC 2 cut(s) 241, 386
MluCI AATT 9 cut(s) 12, 21, 655, 794, 862, 1102, 1231, 1239, 1518
MlyI GAGTC 3 cut(s) 95, 1025, 1136
MmeI TCCRAC 1 cut(s) 342
MroXI GAANNNNTTC 5 cut(s) 206, 794, 862, 1347, 1521
MseI TTAA 1 cut(s) 678
MslI CAYNNNNRTG 3 cut(s) 876, 990, 1223
MspA1I CMGCKG 1 cut(s) 643
MspI CCGG 3 cut(s) 29, 380, 1211
MspR9I CCNGG 4 cut(s) 165, 343, 380, 381
Mva1269I GAATGC 1 cut(s) 1001
MvaI CCWGG 2 cut(s) 165, 343
MvnI CGCG 1 cut(s) 283
MwoI GCNNNNNNNGC 4 cut(s) 157, 312, 612, 1253
NciI CCSGG 2 cut(s) 380, 381
NdeI CATATG 1 cut(s) 873
NdeII GATC 6 cut(s) 133, 411, 562, 814, 895, 1128
NlaIII CATG 5 cut(s) 115, 158, 473, 569, 1401
NlaIV GGNNCC 3 cut(s) 340, 378, 385
NmuCI GTSAC 4 cut(s) 68, 349, 960, 1139
NspI RCATGY 1 cut(s) 115
OliI CACNNNNGTG 1 cut(s) 1223
PagI TCATGA 2 cut(s) 154, 469
PaqCI CACCTGC 1 cut(s) 937
PciSI GCTCTTC 1 cut(s) 876
PctI GAATGC 1 cut(s) 1001
PdmI GAANNNNTTC 5 cut(s) 206, 794, 862, 1347, 1521
PfeI GAWTC 6 cut(s) 39, 88, 772, 911, 1184, 1487
PfoI TCCNGGA 1 cut(s) 341
PkrI GCNGC 4 cut(s) 8, 458, 614, 1310
PleI GAGTC 3 cut(s) 95, 1025, 1136
PpsI GAGTC 3 cut(s) 95, 1025, 1136
PpuMI RGGWCCY 1 cut(s) 339
Psp5II RGGWCCY 1 cut(s) 339
Psp6I CCWGG 2 cut(s) 163, 341
PspFI CCCAGC 1 cut(s) 459
PspGI CCWGG 2 cut(s) 163, 341
PspN4I GGNNCC 3 cut(s) 340, 378, 385
PspPI GGNCC 3 cut(s) 339, 376, 831
PspPPI RGGWCCY 1 cut(s) 339
PstI CTGCAG 2 cut(s) 617, 1321
PstNI CAGNNNCTG 1 cut(s) 1297
PsuI RGATCY 1 cut(s) 411
PvuII CAGCTG 1 cut(s) 643
RsaI GTAC 6 cut(s) 95, 269, 296, 310, 438, 545
RsaNI GTAC 6 cut(s) 94, 268, 295, 309, 437, 544
RseI CAYNNNNRTG 3 cut(s) 876, 990, 1223
SapI GCTCTTC 1 cut(s) 876
SaqAI TTAA 1 cut(s) 678
SatI GCNGC 4 cut(s) 7, 457, 613, 1309
Sau3AI GATC 6 cut(s) 133, 411, 562, 814, 895, 1128
Sau96I GGNCC 3 cut(s) 339, 376, 831
ScaI AGTACT 1 cut(s) 310
SchI GAGTC 3 cut(s) 95, 1025, 1136
ScrFI CCNGG 4 cut(s) 165, 343, 380, 381
SduI GDGCHC 2 cut(s) 241, 386
SfaNI GCATC 2 cut(s) 565, 955
SfcI CTRYAG 4 cut(s) 327, 613, 1119, 1317
SinI GGWCC 2 cut(s) 339, 831
SmaI CCCGGG 1 cut(s) 381
SmiMI CAYNNNNRTG 3 cut(s) 876, 990, 1223
SpeI ACTAGT 1 cut(s) 1081
Sse9I AATT 9 cut(s) 12, 21, 655, 794, 862, 1102, 1231, 1239, 1518
SsiI CCGC 6 cut(s) 281, 456, 600, 606, 711, 1247
SspI AATATT 1 cut(s) 1057
SspMI CTAG 4 cut(s) 1082, 1133, 1421, 1491
StyD4I CCNGG 4 cut(s) 163, 341, 378, 379
StyI CCWWGG 2 cut(s) 106, 799
TaaI ACNGT 2 cut(s) 66, 243
TaiI ACGT 1 cut(s) 433
TaqI TCGA 2 cut(s) 132, 592
TasI AATT 9 cut(s) 12, 21, 655, 794, 862, 1102, 1231, 1239, 1518
TatI WGTACW 3 cut(s) 93, 308, 543
TauI GCSGC 1 cut(s) 459
TfiI GAWTC 6 cut(s) 39, 88, 772, 911, 1184, 1487
Tru1I TTAA 1 cut(s) 678
Tru9I TTAA 1 cut(s) 678
TscAI CASTG 2 cut(s) 691, 1326
TseFI GTSAC 4 cut(s) 68, 349, 960, 1139
TseI GCWGC 3 cut(s) 6, 612, 1308
Tsp45I GTSAC 4 cut(s) 68, 349, 960, 1139
TspGWI ACGGA 1 cut(s) 32
TspMI CCCGGG 1 cut(s) 379
TspRI CASTG 2 cut(s) 691, 1326
VpaK11BI GGWCC 2 cut(s) 339, 831
XapI RAATTY 4 cut(s) 12, 655, 794, 1239
XbaI TCTAGA 2 cut(s) 1420, 1490
XceI RCATGY 1 cut(s) 115
XmaI CCCGGG 1 cut(s) 379
XmnI GAANNNNTTC 5 cut(s) 206, 794, 862, 1347, 1521
XspI CTAG 4 cut(s) 1082, 1133, 1421, 1491
ZrmI AGTACT 1 cut(s) 310
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.