Rroxscaffold_4G00294910
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000639
Physical Location & Seq
Forward (+)
14838525 .. 14842666
4142 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00294910.1

Sequence Viewer

Length: 1935 bp
ATGAGCTGCAAAATTTTCCCAATTCCACCGGAATACCGATTCCGTCCCACCAAAAAGGAGCTGCTGTGTGATCACTTGGAGAAGAAGAATCAGTGCAAGGACTCCCAAAGCATGTCCATCATTCCTGAAATCGATCTGTGCAAGCACGAGCCTCATGAGCTACCAGGACTGGCGTTCACAGGGCAGGAAAATCTGGGGAGGAAACTTTTCTTCTTTTTCTTCTTTTGGTTTACAAGGGCACAGCCTTGGGATAGTCAGGGCAAGTGGTACTTCTTCGCTCCGCGTGATTACAAGTACCCTAACAGCACTCGCTCCAACAGGACTACAGGGGAAGGGTTCTGGAAGCCCACAGGCAAGGTCCGCGACATCAAGGCCCCTGGCTCCAAAGCTGTGATTGGAAGAAAGAGGATCTTAACCTTCCAAAAACATGGAGAGCCGAAACACCAGAAGACCAGCTGGGTCATTCATGAGTATTATCTCATTGAGGCACATTCTGATCCTCCTAAGCAGACAGGGGACTTTGTTGTCTGTTGCTTGAAGTATAAGCCAGACAACTCTGATCATGATGAGGATGCTCCATTCTGCAATCCAGGTAGCGGTAGCGGTAGCGGTAGCTGCAATATGGCCTCCAGTGTTGCAAATCAGGCTGAAGAAAATTTGGCATCCAATGAGCAGTTTAATGGCACTGATTATGAAGCTGAAACTGGTGGCGGTAGGATTACTGAAGCAGAAGAACACCTGGCATATAAGAAGCTGAGAGATGAGCTTCGGATTCCCATTGGAAATCAGAATGAATTCCAAGGCTCGCAAACTGATCCTTGTAATCTTTGGACCGCTGTTGAAGGTCAAGCTGATAGAAGCAATTCGTCTCATATGATTGAAGAGCGACTAAATGATCCAGAAATGCATGAGCTACATCAGTCACCGATGTATACCTCCAATGTCCAGAATGATGGATGCCGTAAGAGGAAATATCCATTTGAAGATAATGACTCTTCTCTTACGAATAAGAAGAACAATATTTCAACCAATGATGGTGATGAACAAGTCAGCAACACCAAATCTAATTCTGAAAACCAAGCTGCAGATGTGATCCTAGAGGGTGACTCTGTTCATTCTGTTGTCTTTCGCTTGAAGAATAAATCAGATAAGAAGGATTTTATCGTAAGTGATGAAAGGGAACCGGATGGCACGGGTGTGTCTAATTGGAAAATTCAGGCGGCACACAAAAATGATGAACCACTTTTTCACCAACCTCAGCCTCTGAATGACTGCTGCTCCTCTGCACTGCGGTCACGGGCATCCCTAGAGCTGGAAGCTGTTCTGCAAGCCATTGGCACTAACGATGATTGTAATAAGTTGCAATCACCATGTGGAGATAGTACTTCTTGTCTAGAAGACAGGAATGAAGTTTCAACCTATGATGAAGATGAGAATATGGATGGTGTGTTTCCACAGCTATGTGACCCACCAGAAGTAAATCAAGATTCACTTTTGCGTCCACTTCAGCCACAAGATTACTGCCCCTCCATACCGCAGTCACCAATATACACAAAGCTGGGAAATGTTTCAGATGCGAATCTCTGTTTTAGTGAATGCAATGATTGGCAATCTGCATTTAAGAAAAAAAATTCAACCAATGAAGTTGACATACCGGTTAGACATATCATGTCTAATTTTCAACATCAAGCTACAGATTCTAGGATTCTAGAGGTGAGAATGGTGCATCGTCAAACCAAAGAAAATATGGAGTCCGCGTTTTATCCATTTCAGCCACTAGATTCAGCTCTGCAGTCAATGATGTACACAATGCATGGAGATGCTCTGCATAATATTGAATGCAATGAGTTGCAATCTTACTCTTCTGATCAAACAGCTCAGGACTCCCTCCATAGACTCCAACCTATCGAAATCATTGGGAAGGGTCTACCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

644

Amino Acids

73.03

Weight (kDa)

5.22

Isoelectric Point (pI)

56.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 9 - 72 2.8e-10 No apical meristem (NAM) protein
NAM PF02365 86 - 159 8.2e-19 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000639)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020
rosa_chinensis RchiOBHm_Chr1g0324821 RchiOBHm_Chr1g0333801 RchiOBHm_Chr1g0361601 RchiOBHm_Chr1g0361611 RchiOBHm_Chr1g0361661
rosa_laevigata RLG00000027711 RLG00000027712 RLG00000027714 RLG00000027715 RLG00000027716 RLG00000029530 RLG00000029531 RLG00000030172
rosa_multiflora Rmu_co8302323.1_g000001 Rmu_co8459497.1_g000001 Rmu_sc0003426.1_g000013 Rmu_sc0003693.1_g000002 Rmu_sc0003693.1_g000003 Rmu_sc0003704.1_g000001 Rmu_sc0003704.1_g000002 Rmu_sc0006101.1_g000001 Rmu_sc0006101.1_g000010 Rmu_sc0006417.1_g000001 Rmu_sc0006417.1_g000002 Rmu_sc0006417.1_g000005 Rmu_sc0007217.1_g000011 Rmu_sc0010981.1_g000006 Rmu_sc0011258.1_g000006 Rmu_sc0017253.1_g000003 Rmu_sc0017253.1_g000004 Rmu_sc0017750.1_g000001 Rmu_sc0026316.1_g000001 Rmu_sc0038193.1_g000002 Rmu_sc0041549.1_g000001
rosa_roxburghii Rroxscaffold_159G00433000 Rroxscaffold_159G00433050 Rroxscaffold_159G00433080 Rroxscaffold_4G00294830 Rroxscaffold_4G00294840 Rroxscaffold_4G00294900 Rroxscaffold_4G00294910 Rroxscaffold_4G00294920 Rroxscaffold_4G00317230 Rroxscaffold_4G00325170 Rroxscaffold_4G00325200 Rroxscaffold_4G00325280
rosa_rugosa Rorug01G0048000 Rorug01G0111600 Rorug01G0111700 Rorug01G0290200 Rorug01G0290300 Rorug01G0290300 Rorug01G0290400 Rorug01G0290600
rosa_samantha Rh1AG064300 Rh1AG064500 Rh1AG134000 Rh1AG134100 Rh1AG300500 Rh1AG300600
rosa_wichuraiana Rw1G005340 Rw1G005390 Rw1G005420 Rw1G011180 Rw1G011190 Rw1G026650 Rw1G026660 Rw1G026680 Rw1G026690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 524
AccI GTMKAC 2 cut(s) 932, 1927
AccII CGCG 3 cut(s) 283, 363, 1757
AclWI GGATC 5 cut(s) 416, 491, 809, 890, 1087
AcsI RAATTY 5 cut(s) 12, 655, 794, 1212, 1630
AcuI CTGAAG 3 cut(s) 669, 744, 1490
AdeI CACNNNGTG 1 cut(s) 1373
AfaI GTAC 4 cut(s) 269, 296, 1384, 1805
AfiI CCNNNNNNNGG 2 cut(s) 596, 1312
AgeI ACCGGT 1 cut(s) 1654
AjnI CCWGG 4 cut(s) 163, 376, 589, 738
AleI CACNNNNGTG 1 cut(s) 1196
Alw26I GTCTC 1 cut(s) 873
AlwI GGATC 5 cut(s) 416, 491, 809, 890, 1087
AlwNI CAGNNNCTG 1 cut(s) 1264
AoxI GGCC 2 cut(s) 372, 624
ApeKI GCWGC 5 cut(s) 6, 61, 615, 1082, 1275
ApoI RAATTY 5 cut(s) 12, 655, 794, 1212, 1630
AsiGI ACCGGT 1 cut(s) 1654
Asp700I GAANNNNTTC 5 cut(s) 206, 794, 862, 1320, 1567
AspS9I GGNCC 3 cut(s) 358, 373, 831
AsuHPI GGTGA 7 cut(s) 915, 1049, 1115, 1241, 1359, 1533, 1726
AvaII GGWCC 2 cut(s) 358, 831
BaeGI GKGCMC 1 cut(s) 241
BarI GAAGNNNNNNTAC 2 cut(s) 1635, 1667
BauI CACGAG 1 cut(s) 146
BbsI GAAGAC 2 cut(s) 455, 1404
BbvCI CCTCAGC 1 cut(s) 1257
BbvI GCAGC 4 cut(s) 48, 602, 1069, 1262
BccI CCATC 5 cut(s) 125, 947, 1028, 1181, 1436
BceAI ACGGC 1 cut(s) 945
BciT130I CCWGG 4 cut(s) 165, 378, 591, 740
BclI TGATCA 3 cut(s) 70, 559, 1867
BcoDI GTCTC 1 cut(s) 873
BfaI CTAG 6 cut(s) 1097, 1307, 1394, 1701, 1709, 1778
BfmI CTRYAG 4 cut(s) 324, 1083, 1692, 1790
BisI GCNGC 6 cut(s) 7, 62, 616, 1083, 1221, 1276
BlsI GCNGC 6 cut(s) 8, 63, 617, 1084, 1222, 1277
BmcAI AGTACT 1 cut(s) 1384
Bme1390I CCNGG 4 cut(s) 165, 378, 591, 740
Bme18I GGWCC 2 cut(s) 358, 831
BmgT120I GGNCC 3 cut(s) 358, 373, 831
BmiI GGNNCC 3 cut(s) 375, 382, 1182
BmrFI CCNGG 4 cut(s) 165, 378, 591, 740
BmsI GCATC 7 cut(s) 562, 671, 947, 1310, 1564, 1735, 1810
BpiI GAAGAC 2 cut(s) 455, 1404
BplI GAGNNNNNCTC 2 cut(s) 1091, 1123
BpmI CTGGAG 1 cut(s) 613
Bpu10I CCTNAGC 3 cut(s) 504, 1257, 1878
Bsa29I ATCGAT 1 cut(s) 132
BsaBI GATNNNNATC 1 cut(s) 1578
BsaJI CCNNGG 3 cut(s) 245, 376, 799
BsaWI WCCGGW 3 cut(s) 28, 1183, 1654
BsaXI ACNNNNNCTCC 8 cut(s) 50, 80, 1262, 1292, 1511, 1541, 1742, 1772
Bsc4I CCNNNNNNNGG 2 cut(s) 596, 1312
Bse118I RCCGGY 1 cut(s) 1654
Bse1I ACTGG 3 cut(s) 174, 630, 709
Bse3DI GCAATG 2 cut(s) 1606, 1849
Bse8I GATNNNNATC 1 cut(s) 1578
BseBI CCWGG 4 cut(s) 165, 378, 591, 740
BseCI ATCGAT 1 cut(s) 132
BseDI CCNNGG 3 cut(s) 245, 376, 799
BseGI GGATG 6 cut(s) 577, 662, 962, 1192, 1301, 1447
BseJI GATNNNNATC 1 cut(s) 1578
BseLI CCNNNNNNNGG 2 cut(s) 596, 1312
BseMI GCAATG 2 cut(s) 1606, 1849
BseMII CTCAG 3 cut(s) 746, 1271, 1892
BseNI ACTGG 3 cut(s) 174, 630, 709
BseRI GAGGAG 1 cut(s) 1270
BseSI GKGCMC 1 cut(s) 241
BseXI GCAGC 4 cut(s) 48, 602, 1069, 1262
BseYI CCCAGC 2 cut(s) 456, 1558
BsgI GTGCAG 1 cut(s) 1269
Bsh1236I CGCG 3 cut(s) 283, 363, 1757
BshFI GGCC 2 cut(s) 374, 626
BshTI ACCGGT 1 cut(s) 1654
BshVI ATCGAT 1 cut(s) 132
BsiSI CCGG 3 cut(s) 29, 1184, 1655
BslFI GGGAC 2 cut(s) 30, 530
BslI CCNNNNNNNGG 2 cut(s) 596, 1312
BsmAI GTCTC 1 cut(s) 873
BsmBI CGTCTC 1 cut(s) 873
BsmFI GGGAC 2 cut(s) 30, 530
BsmI GAATGC 2 cut(s) 1601, 1844
BsnI GGCC 2 cut(s) 374, 626
Bsp1286I GDGCHC 1 cut(s) 241
Bsp1407I TGTACA 1 cut(s) 1803
Bsp143I GATC 9 cut(s) 70, 133, 408, 496, 559, 814, 895, 1092, 1867
BspANI GGCC 2 cut(s) 374, 626
BspCNI CTCAG 3 cut(s) 747, 1270, 1891
BspDI ATCGAT 1 cut(s) 132
BspFNI CGCG 3 cut(s) 283, 363, 1757
BspHI TCATGA 3 cut(s) 154, 466, 562
BspLI GGNNCC 3 cut(s) 375, 382, 1182
BspMAI CTGCAG 2 cut(s) 1087, 1794
BspPI GGATC 5 cut(s) 416, 491, 809, 890, 1087
BspQI GCTCTTC 1 cut(s) 876
BsrDI GCAATG 2 cut(s) 1606, 1849
BsrFI RCCGGY 1 cut(s) 1654
BsrGI TGTACA 1 cut(s) 1803
BsrI ACTGG 3 cut(s) 174, 630, 709
BssAI RCCGGY 1 cut(s) 1654
BssECI CCNNGG 3 cut(s) 245, 376, 799
BssMI GATC 9 cut(s) 70, 133, 408, 496, 559, 814, 895, 1092, 1867
BssNAI GTATAC 1 cut(s) 933
BssSI CACGAG 1 cut(s) 146
BssT1I CCWWGG 2 cut(s) 245, 799
Bst1107I GTATAC 1 cut(s) 933
Bst2BI CACGAG 1 cut(s) 146
Bst2UI CCWGG 4 cut(s) 165, 378, 591, 740
Bst6I CTCTTC 3 cut(s) 876, 1000, 1867
BstAUI TGTACA 1 cut(s) 1803
BstC8I GCNNGC 3 cut(s) 143, 806, 1329
BstDEI CTNAG 4 cut(s) 504, 755, 1257, 1878
BstF5I GGATG 6 cut(s) 577, 662, 962, 1192, 1301, 1447
BstFNI CGCG 3 cut(s) 283, 363, 1757
BstKTI GATC 9 cut(s) 73, 136, 411, 499, 562, 817, 898, 1095, 1870
BstMAI GTCTC 1 cut(s) 873
BstMBI GATC 9 cut(s) 70, 133, 408, 496, 559, 814, 895, 1092, 1867
BstMWI GCNNNNNNNGC 4 cut(s) 157, 360, 615, 644
BstNI CCWGG 4 cut(s) 165, 378, 591, 740
BstNSI RCATGY 1 cut(s) 115
BstSCI CCNGG 4 cut(s) 163, 376, 589, 738
BstSFI CTRYAG 4 cut(s) 324, 1083, 1692, 1790
BstSLI GKGCMC 1 cut(s) 241
BstUI CGCG 3 cut(s) 283, 363, 1757
BstV1I GCAGC 4 cut(s) 48, 602, 1069, 1262
BstV2I GAAGAC 2 cut(s) 455, 1404
BstX2I RGATCY 1 cut(s) 408
BstXI CCANNNNNNTGG 2 cut(s) 428, 953
BstYI RGATCY 1 cut(s) 408
BstZ17I GTATAC 1 cut(s) 933
Bsu15I ATCGAT 1 cut(s) 132
BsuRI GGCC 2 cut(s) 374, 626
BsuTUI ATCGAT 1 cut(s) 132
BtsCI GGATG 6 cut(s) 577, 662, 962, 1192, 1301, 1447
BtsI GCAGTG 1 cut(s) 1286
BtsIMutI CAGTG 4 cut(s) 98, 637, 684, 1286
Cac8I GCNNGC 3 cut(s) 143, 806, 1329
CaiI CAGNNNCTG 1 cut(s) 1264
CciI TCATGA 3 cut(s) 154, 466, 562
Cfr10I RCCGGY 1 cut(s) 1654
Cfr13I GGNCC 3 cut(s) 358, 373, 831
ClaI ATCGAT 1 cut(s) 132
CseI GACGC 1 cut(s) 1487
Csp6I GTAC 4 cut(s) 268, 295, 1383, 1804
CspAI ACCGGT 1 cut(s) 1654
CviAII CATG 9 cut(s) 112, 155, 428, 467, 563, 908, 1371, 1669, 1814
CviQI GTAC 4 cut(s) 268, 295, 1383, 1804
DdeI CTNAG 4 cut(s) 504, 755, 1257, 1878
DpnI GATC 9 cut(s) 72, 135, 410, 498, 561, 816, 897, 1094, 1869
DpnII GATC 9 cut(s) 70, 133, 408, 496, 559, 814, 895, 1092, 1867
DraIII CACNNNGTG 1 cut(s) 1373
DrdI GACNNNNNNGTC 1 cut(s) 524
DseDI GACNNNNNNGTC 1 cut(s) 524
Eam1104I CTCTTC 3 cut(s) 876, 1000, 1867
EarI CTCTTC 3 cut(s) 876, 1000, 1867
Eco130I CCWWGG 2 cut(s) 245, 799
Eco47I GGWCC 2 cut(s) 358, 831
Eco57I CTGAAG 3 cut(s) 669, 744, 1490
EcoO109I RGGNCCY 1 cut(s) 373
EcoRI GAATTC 1 cut(s) 794
EcoRII CCWGG 4 cut(s) 163, 376, 589, 738
EcoT14I CCWWGG 2 cut(s) 245, 799
EcoT22I ATGCAT 2 cut(s) 909, 1815
ErhI CCWWGG 2 cut(s) 245, 799
Esp3I CGTCTC 1 cut(s) 873
FaeI CATG 9 cut(s) 115, 158, 431, 470, 566, 911, 1374, 1672, 1817
FalI AAGNNNNNCTT 6 cut(s) 254, 286, 395, 427, 1476, 1508
FaqI GGGAC 2 cut(s) 30, 530
FatI CATG 9 cut(s) 111, 154, 427, 466, 562, 907, 1370, 1668, 1813
FauNDI CATATG 1 cut(s) 873
FbaI TGATCA 3 cut(s) 70, 559, 1867
FblI GTMKAC 2 cut(s) 932, 1927
Fnu4HI GCNGC 6 cut(s) 7, 62, 616, 1083, 1221, 1276
FokI GGATG 6 cut(s) 584, 649, 969, 1199, 1288, 1454
Fsp4HI GCNGC 6 cut(s) 7, 62, 616, 1083, 1221, 1276
FspBI CTAG 6 cut(s) 1097, 1307, 1394, 1701, 1709, 1778
GluI GCNGC 6 cut(s) 7, 62, 616, 1083, 1221, 1276
GsaI CCCAGC 2 cut(s) 460, 1562
GsuI CTGGAG 1 cut(s) 613
HaeIII GGCC 2 cut(s) 374, 626
HapII CCGG 3 cut(s) 29, 1184, 1655
HgaI GACGC 1 cut(s) 1487
Hin1II CATG 9 cut(s) 115, 158, 431, 470, 566, 911, 1374, 1672, 1817
HincII GTYRAC 1 cut(s) 1648
HindII GTYRAC 1 cut(s) 1648
HpaII CCGG 3 cut(s) 29, 1184, 1655
HphI GGTGA 7 cut(s) 915, 1049, 1115, 1241, 1359, 1533, 1726
Hpy166II GTNNAC 7 cut(s) 177, 231, 933, 1502, 1648, 1806, 1928
Hpy188I TCNGA 9 cut(s) 496, 559, 771, 789, 1072, 1147, 1266, 1573, 1867
Hpy8I GTNNAC 7 cut(s) 177, 231, 933, 1502, 1648, 1806, 1928
HpyAV CCTTC 5 cut(s) 326, 427, 836, 1147, 1915
HpyF10VI GCNNNNNNNGC 4 cut(s) 157, 360, 615, 644
HpyF3I CTNAG 4 cut(s) 504, 755, 1257, 1878
Hsp92II CATG 9 cut(s) 115, 158, 431, 470, 566, 911, 1374, 1672, 1817
Ksp22I TGATCA 3 cut(s) 70, 559, 1867
Kzo9I GATC 9 cut(s) 70, 133, 408, 496, 559, 814, 895, 1092, 1867
LguI GCTCTTC 1 cut(s) 876
LmnI GCTCC 6 cut(s) 58, 283, 317, 386, 580, 1283
Lsp1109I GCAGC 4 cut(s) 48, 602, 1069, 1262
LweI GCATC 7 cut(s) 562, 671, 947, 1310, 1564, 1735, 1810
MaeI CTAG 6 cut(s) 1097, 1307, 1394, 1701, 1709, 1778
MaeIII GTNAC 5 cut(s) 921, 1103, 1293, 1463, 1539
MalI GATC 9 cut(s) 72, 135, 410, 498, 561, 816, 897, 1094, 1869
MboI GATC 9 cut(s) 70, 133, 408, 496, 559, 814, 895, 1092, 1867
MflI RGATCY 1 cut(s) 408
MhlI GDGCHC 1 cut(s) 241
MlyI GAGTC 6 cut(s) 95, 986, 1100, 1760, 1877, 1890
MmeI TCCRAC 2 cut(s) 339, 1924
Mph1103I ATGCAT 2 cut(s) 909, 1815
MroXI GAANNNNTTC 5 cut(s) 206, 794, 862, 1320, 1567
MseI TTAA 3 cut(s) 413, 678, 1620
MslI CAYNNNNRTG 4 cut(s) 1196, 1230, 1459, 1818
MspA1I CMGCKG 2 cut(s) 456, 836
MspI CCGG 3 cut(s) 29, 1184, 1655
MspR9I CCNGG 4 cut(s) 165, 378, 591, 740
Mva1269I GAATGC 2 cut(s) 1601, 1844
MvaI CCWGG 4 cut(s) 165, 378, 591, 740
MvnI CGCG 3 cut(s) 283, 363, 1757
MwoI GCNNNNNNNGC 4 cut(s) 157, 360, 615, 644
NdeI CATATG 1 cut(s) 873
NdeII GATC 9 cut(s) 70, 133, 408, 496, 559, 814, 895, 1092, 1867
NlaIII CATG 9 cut(s) 115, 158, 431, 470, 566, 911, 1374, 1672, 1817
NlaIV GGNNCC 3 cut(s) 375, 382, 1182
NmuCI GTSAC 5 cut(s) 921, 1103, 1293, 1463, 1539
NsiI ATGCAT 2 cut(s) 909, 1815
NspI RCATGY 1 cut(s) 115
OliI CACNNNNGTG 1 cut(s) 1196
PagI TCATGA 3 cut(s) 154, 466, 562
PciSI GCTCTTC 1 cut(s) 876
PctI GAATGC 2 cut(s) 1601, 1844
PdmI GAANNNNTTC 5 cut(s) 206, 794, 862, 1320, 1567
PfeI GAWTC 8 cut(s) 39, 88, 772, 1487, 1579, 1697, 1705, 1781
PinAI ACCGGT 1 cut(s) 1654
PkrI GCNGC 6 cut(s) 8, 63, 617, 1084, 1222, 1277
PleI GAGTC 6 cut(s) 95, 986, 1100, 1759, 1877, 1890
PpsI GAGTC 6 cut(s) 95, 986, 1100, 1759, 1877, 1890
Psp6I CCWGG 4 cut(s) 163, 376, 589, 738
PspFI CCCAGC 2 cut(s) 456, 1558
PspGI CCWGG 4 cut(s) 163, 376, 589, 738
PspN4I GGNNCC 3 cut(s) 375, 382, 1182
PspPI GGNCC 3 cut(s) 358, 373, 831
PstI CTGCAG 2 cut(s) 1087, 1794
PstNI CAGNNNCTG 1 cut(s) 1264
PsuI RGATCY 1 cut(s) 408
PvuII CAGCTG 1 cut(s) 456
RsaI GTAC 4 cut(s) 269, 296, 1384, 1805
RsaNI GTAC 4 cut(s) 268, 295, 1383, 1804
RseI CAYNNNNRTG 4 cut(s) 1196, 1230, 1459, 1818
SapI GCTCTTC 1 cut(s) 876
SaqAI TTAA 3 cut(s) 413, 678, 1620
SatI GCNGC 6 cut(s) 7, 62, 616, 1083, 1221, 1276
Sau3AI GATC 9 cut(s) 70, 133, 408, 496, 559, 814, 895, 1092, 1867
Sau96I GGNCC 3 cut(s) 358, 373, 831
ScaI AGTACT 1 cut(s) 1384
SchI GAGTC 6 cut(s) 95, 986, 1100, 1760, 1877, 1890
ScrFI CCNGG 4 cut(s) 165, 378, 591, 740
SduI GDGCHC 1 cut(s) 241
SfaNI GCATC 7 cut(s) 562, 671, 947, 1310, 1564, 1735, 1810
SfcI CTRYAG 4 cut(s) 324, 1083, 1692, 1790
SinI GGWCC 2 cut(s) 358, 831
SmiMI CAYNNNNRTG 4 cut(s) 1196, 1230, 1459, 1818
SspI AATATT 2 cut(s) 1021, 1834
SspMI CTAG 6 cut(s) 1097, 1307, 1394, 1701, 1709, 1778
StyD4I CCNGG 4 cut(s) 163, 376, 589, 738
StyI CCWWGG 2 cut(s) 245, 799
TaqI TCGA 2 cut(s) 132, 1908
TatI WGTACW 2 cut(s) 1382, 1803
TauI GCSGC 1 cut(s) 1223
TfiI GAWTC 8 cut(s) 39, 88, 772, 1487, 1579, 1697, 1705, 1781
Tru1I TTAA 3 cut(s) 413, 678, 1620
Tru9I TTAA 3 cut(s) 413, 678, 1620
TscAI CASTG 4 cut(s) 98, 637, 691, 1293
TseFI GTSAC 5 cut(s) 921, 1103, 1293, 1463, 1539
TseI GCWGC 5 cut(s) 6, 61, 615, 1082, 1275
Tsp45I GTSAC 5 cut(s) 921, 1103, 1293, 1463, 1539
TspGWI ACGGA 1 cut(s) 32
TspRI CASTG 4 cut(s) 98, 637, 691, 1293
VpaK11BI GGWCC 2 cut(s) 358, 831
XapI RAATTY 5 cut(s) 12, 655, 794, 1212, 1630
XbaI TCTAGA 2 cut(s) 1393, 1708
XceI RCATGY 1 cut(s) 115
XcmI CCANNNNNNNNNTGG 1 cut(s) 1744
XmiI GTMKAC 2 cut(s) 932, 1927
XmnI GAANNNNTTC 5 cut(s) 206, 794, 862, 1320, 1567
XspI CTAG 6 cut(s) 1097, 1307, 1394, 1701, 1709, 1778
ZrmI AGTACT 1 cut(s) 1384
Zsp2I ATGCAT 2 cut(s) 909, 1815
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.