Rroxscaffold_159G00433000
NAC Family

(NAC) domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000159
OG0000639
Physical Location & Seq
Reverse (-)
739217 .. 747242
8026 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_159G00433000.1

Sequence Viewer

Length: 1812 bp
ATGGCCATATATATGGCCAATCTTACCTATATGGCCATATATATCTGGTGCCATATATATCTTACCTACATGGCCATACACCACAGCCTATCTTCCCTATATGGCCATATATATCTGGGAGGGCTCAAAATATTGGCTATTTCTCCACTTTCAAATGAACCAACATATATAAGTTGGGGACTTCTGGTTCAAAGGAGACTTCGAAGCTTTCACGGCATTGGTGCATTTGTCAGCAGTGGCGGCAGGTGGTTTCTTCTCCCTGGTGGCTGGTTTTCTGGTGGAGAGGCTCTGTCATGGAGCTGTGGCTGGGCTCTGAGCAAAAACAACACTGATCAAAATCAGCTATTCAAAGTGAAAGAGATGAGCTGCGGCGACTTCACAGTTCCAAAGGGATACCGATTCCATCCCTCCGACGAGGAGCTGCTTAGTCACTACTTGGAGGAGAAGAATCAGTGCAAGGACTCCCAGATCAGGACCATCATCCCTGAAATCGATGTGTGCAAGCACGAGCCTCGCGAGTTACCAGAACTGGCGTACACAAGGGCGGAAAGTCTGGGCAGGAAATTTTTCTTTTTCTTCTTCTTTTGGTTTGCAAGGGAAGTGTCTTGGGACAATCAGGAAAAGTGGTACTTCTTCACTCCGCGTGATTACAAGTACAATAACAGCACTCGCTCCAACAGGACTACAGGGGAAGGGTTTTGGAAGATCACAGGCAAGGACCGTGCAATCAAGGCCCCCGGCTCCAAAGCTGTGATTGGGAGAAAGAGGACCTTGACCTTCTACAAACGTGGAGTGCCGAAATCCCAGAAGACCAACTGGGTTCTTCATGAGTATTATCTCATTCAGGCACATTCTGATCCTCCTAAGCAGATAGGGGACTTTGTTATCTGCTGCTTGAAGTACAAGTCAGACAACTCTGATTATGATAAGGAGGCCCCATTCTGCGATCGAGGTAGCTGTAGCTGCAGTATGGCCTCCAATGTTGAAAATCAAGCTGAAGAAAACTGGGCATCGGGAGAGCTGGTAAATGTTGTTCCAATTCCCAGTGGAAATGATGATGAAACTGGTGGTGGTATGATTACAGAAGAAGAGGAATACCTGACTTTAGAGGAGGTGGAAGATATTCTTCAGATTCCCATTGGCAATCCGCATGAATTGGAAGGCCAACCTGATCCTTGTCATTTAGATATGAATGATCTTTCAAGCTCTGTTGAAGGCCAACCTGATAGAAGCAATTCGTCTGACCTGATTGAAGAGCTACTAGATAACCCAGAAAATCTGGATTCACTCTATCATCCGCCTGCGCCACCTCAACTGCATCATCTACATCAGTCACCAATGTATACCACCAATGTCCATAATGATGAATGTCGTAAGAGGACATATCCATTTGAGGATAATGACCCTTCTTCTAAGAAGAAGAAGAATATTTCAACCAATGATGATGACGAATTAGTTAGCAACACCGCATCTAGTTCTGAAAATCAAGCTGCAAATATGATTCCAGAGGGATATTCTCAACTAGGAGCAAATCTGGGATCAGACTTTGATTCATTTTTGCCAAAGGATTACAATTATACATTACCATCAATAAACGGAGGACCGAGAGATTTTTCCCATGACAATAATTTCATTGAGTGGGATGATTTACTATCTTTATACGAAGGTAATAACTCTTCTCTCGCACAGTTCCCACATACAGTTATTGATGGAGGTAGAGGAGTAATCAGTGACAGATACACCGAAGTAGTACATGGATCGGTAGACGATTATTCTGCATTAGCCATTGGAGCATCGCTCCAGTGTAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

603

Amino Acids

68.32

Weight (kDa)

5.02

Isoelectric Point (pI)

47.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 129 - 279 9.4e-33 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000639)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020
rosa_chinensis RchiOBHm_Chr1g0324821 RchiOBHm_Chr1g0333801 RchiOBHm_Chr1g0361601 RchiOBHm_Chr1g0361611 RchiOBHm_Chr1g0361661
rosa_laevigata RLG00000027711 RLG00000027712 RLG00000027714 RLG00000027715 RLG00000027716 RLG00000029530 RLG00000029531 RLG00000030172
rosa_multiflora Rmu_co8302323.1_g000001 Rmu_co8459497.1_g000001 Rmu_sc0003426.1_g000013 Rmu_sc0003693.1_g000002 Rmu_sc0003693.1_g000003 Rmu_sc0003704.1_g000001 Rmu_sc0003704.1_g000002 Rmu_sc0006101.1_g000001 Rmu_sc0006101.1_g000010 Rmu_sc0006417.1_g000001 Rmu_sc0006417.1_g000002 Rmu_sc0006417.1_g000005 Rmu_sc0007217.1_g000011 Rmu_sc0010981.1_g000006 Rmu_sc0011258.1_g000006 Rmu_sc0017253.1_g000003 Rmu_sc0017253.1_g000004 Rmu_sc0017750.1_g000001 Rmu_sc0026316.1_g000001 Rmu_sc0038193.1_g000002 Rmu_sc0041549.1_g000001
rosa_roxburghii Rroxscaffold_159G00433000 Rroxscaffold_159G00433050 Rroxscaffold_159G00433080 Rroxscaffold_4G00294830 Rroxscaffold_4G00294840 Rroxscaffold_4G00294900 Rroxscaffold_4G00294910 Rroxscaffold_4G00294920 Rroxscaffold_4G00317230 Rroxscaffold_4G00325170 Rroxscaffold_4G00325200 Rroxscaffold_4G00325280
rosa_rugosa Rorug01G0048000 Rorug01G0111600 Rorug01G0111700 Rorug01G0290200 Rorug01G0290300 Rorug01G0290300 Rorug01G0290400 Rorug01G0290600
rosa_samantha Rh1AG064300 Rh1AG064500 Rh1AG134000 Rh1AG134100 Rh1AG300500 Rh1AG300600
rosa_wichuraiana Rw1G005340 Rw1G005390 Rw1G005420 Rw1G011180 Rw1G011190 Rw1G026650 Rw1G026660 Rw1G026680 Rw1G026690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 234
Acc36I ACCTGC 1 cut(s) 234
AccB1I GGYRCC 1 cut(s) 48
AccI GTMKAC 2 cut(s) 1343, 1764
AccII CGCG 2 cut(s) 516, 643
AciI CCGC 7 cut(s) 240, 369, 545, 641, 1148, 1298, 1467
AclWI GGATC 4 cut(s) 851, 1166, 1546, 1765
AcoI YGGCCR 5 cut(s) 3, 15, 33, 72, 103
AcsI RAATTY 1 cut(s) 563
AcuI CTGAAG 2 cut(s) 1017, 1112
AfaI GTAC 5 cut(s) 536, 629, 656, 902, 1752
AfiI CCNNNNNNNGG 1 cut(s) 471
AgsI TTSAA 9 cut(s) 153, 191, 349, 898, 986, 1203, 1214, 1253, 1434
AjnI CCWGG 1 cut(s) 259
AloI GAACNNNNNNTCC 2 cut(s) 171, 203
Alw26I GTCTC 1 cut(s) 190
AlwI GGATC 4 cut(s) 851, 1166, 1546, 1765
ApeKI GCWGC 5 cut(s) 366, 421, 891, 963, 1490
ApoI RAATTY 1 cut(s) 563
Asp700I GAANNNNTTC 3 cut(s) 566, 1122, 1234
AspLEI GCGC 1 cut(s) 1306
AspS9I GGNCC 6 cut(s) 474, 718, 733, 768, 934, 1601
AsuC2I CCSGG 1 cut(s) 738
AsuHPI GGTGA 1 cut(s) 1326
AsuII TTCGAA 1 cut(s) 202
AvaII GGWCC 4 cut(s) 474, 718, 768, 1601
BalI TGGCCA 5 cut(s) 5, 17, 35, 74, 105
BanI GGYRCC 1 cut(s) 48
BanII GRGCYC 2 cut(s) 126, 313
BarI GAAGNNNNNNTAC 2 cut(s) 1660, 1692
BauI CACGAG 1 cut(s) 506
BbsI GAAGAC 1 cut(s) 815
BbvI GCAGC 5 cut(s) 353, 408, 878, 950, 1477
BccI CCATC 4 cut(s) 411, 485, 1594, 1703
BceAI ACGGC 1 cut(s) 229
BcgI CGANNNNNNTGC 4 cut(s) 494, 528, 1757, 1791
BciT130I CCWGG 1 cut(s) 261
BciVI GTATCC 1 cut(s) 386
BclI TGATCA 1 cut(s) 331
BcnI CCSGG 1 cut(s) 738
BcoDI GTCTC 1 cut(s) 190
BfaI CTAG 3 cut(s) 1262, 1473, 1523
BfmI CTRYAG 3 cut(s) 684, 958, 964
BfuAI ACCTGC 1 cut(s) 234
BfuI GTATCC 1 cut(s) 386
BisI GCNGC 7 cut(s) 241, 367, 370, 422, 892, 964, 1491
BlsI GCNGC 7 cut(s) 242, 368, 371, 423, 893, 965, 1492
Bme1390I CCNGG 2 cut(s) 261, 738
Bme18I GGWCC 4 cut(s) 474, 718, 768, 1601
BmgT120I GGNCC 6 cut(s) 474, 718, 733, 768, 934, 1601
BmiI GGNNCC 4 cut(s) 50, 735, 742, 936
BmrFI CCNGG 2 cut(s) 261, 738
BmrI ACTGGG 3 cut(s) 826, 1015, 1038
BmsI GCATC 4 cut(s) 1019, 1327, 1478, 1802
BmuI ACTGGG 3 cut(s) 826, 1015, 1038
BpiI GAAGAC 1 cut(s) 815
BplI GAGNNNNNCTC 1 cut(s) 1782
BpmI CTGGAG 1 cut(s) 1784
Bpu10I CCTNAGC 1 cut(s) 864
Bpu14I TTCGAA 1 cut(s) 202
BpuMI CCSGG 1 cut(s) 738
Bsa29I ATCGAT 1 cut(s) 492
BsaBI GATNNNNATC 1 cut(s) 336
BsaJI CCNNGG 2 cut(s) 259, 736
BsaXI ACNNNNNCTCC 2 cut(s) 1008, 1038
Bsc4I CCNNNNNNNGG 1 cut(s) 471
Bse1I ACTGG 6 cut(s) 534, 821, 1010, 1044, 1069, 1801
Bse8I GATNNNNATC 1 cut(s) 336
BseBI CCWGG 1 cut(s) 261
BseCI ATCGAT 1 cut(s) 492
BseDI CCNNGG 2 cut(s) 259, 736
BseGI GGATG 4 cut(s) 403, 480, 1294, 1648
BseJI GATNNNNATC 1 cut(s) 336
BseLI CCNNNNNNNGG 1 cut(s) 471
BseMII CTCAG 1 cut(s) 305
BseNI ACTGG 6 cut(s) 534, 821, 1010, 1044, 1069, 1801
BseRI GAGGAG 4 cut(s) 431, 455, 1124, 1734
BseXI GCAGC 5 cut(s) 353, 408, 878, 950, 1477
BseYI CCCAGC 1 cut(s) 306
Bsh1236I CGCG 2 cut(s) 516, 643
Bsh1285I CGRYCG 1 cut(s) 949
BshNI GGYRCC 1 cut(s) 48
BshVI ATCGAT 1 cut(s) 492
BsiEI CGRYCG 1 cut(s) 949
BsiSI CCGG 1 cut(s) 738
BslFI GGGAC 3 cut(s) 192, 623, 890
BslI CCNNNNNNNGG 1 cut(s) 471
BsmAI GTCTC 1 cut(s) 190
BsmFI GGGAC 3 cut(s) 192, 623, 890
Bsp119I TTCGAA 1 cut(s) 202
Bsp1286I GDGCHC 2 cut(s) 126, 313
Bsp143I GATC 9 cut(s) 331, 468, 705, 856, 946, 1171, 1195, 1538, 1757
Bsp68I TCGCGA 1 cut(s) 516
BspACI CCGC 7 cut(s) 240, 369, 545, 641, 1148, 1298, 1467
BspCNI CTCAG 1 cut(s) 306
BspDI ATCGAT 1 cut(s) 492
BspFNI CGCG 2 cut(s) 516, 643
BspHI TCATGA 1 cut(s) 826
BspLI GGNNCC 4 cut(s) 50, 735, 742, 936
BspMAI CTGCAG 1 cut(s) 968
BspMI ACCTGC 1 cut(s) 234
BspPI GGATC 4 cut(s) 851, 1166, 1546, 1765
BspQI GCTCTTC 1 cut(s) 1248
BspT104I TTCGAA 1 cut(s) 202
BspT107I GGYRCC 1 cut(s) 48
BsrI ACTGG 6 cut(s) 534, 821, 1010, 1044, 1069, 1801
BssECI CCNNGG 2 cut(s) 259, 736
BssMI GATC 9 cut(s) 331, 468, 705, 856, 946, 1171, 1195, 1538, 1757
BssNAI GTATAC 1 cut(s) 1344
BssSI CACGAG 1 cut(s) 506
Bst1107I GTATAC 1 cut(s) 1344
Bst2BI CACGAG 1 cut(s) 506
Bst2UI CCWGG 1 cut(s) 261
Bst4CI ACNGT 4 cut(s) 382, 722, 1689, 1702
Bst6I CTCTTC 3 cut(s) 1083, 1248, 1681
BstBI TTCGAA 1 cut(s) 202
BstC8I GCNNGC 2 cut(s) 503, 1302
BstDEI CTNAG 4 cut(s) 314, 425, 864, 1413
BstF5I GGATG 4 cut(s) 403, 480, 1294, 1648
BstFNI CGCG 2 cut(s) 516, 643
BstHHI GCGC 1 cut(s) 1306
BstKTI GATC 9 cut(s) 334, 471, 708, 859, 949, 1174, 1198, 1541, 1760
BstMAI GTCTC 1 cut(s) 190
BstMBI GATC 9 cut(s) 331, 468, 705, 856, 946, 1171, 1195, 1538, 1757
BstMCI CGRYCG 1 cut(s) 949
BstMWI GCNNNNNNNGC 5 cut(s) 213, 240, 731, 963, 1790
BstNI CCWGG 1 cut(s) 261
BstSCI CCNGG 2 cut(s) 259, 736
BstSFI CTRYAG 3 cut(s) 684, 958, 964
BstUI CGCG 2 cut(s) 516, 643
BstV1I GCAGC 5 cut(s) 353, 408, 878, 950, 1477
BstV2I GAAGAC 1 cut(s) 815
BstXI CCANNNNNNTGG 1 cut(s) 13
BstZ17I GTATAC 1 cut(s) 1344
Bsu15I ATCGAT 1 cut(s) 492
BsuI GTATCC 1 cut(s) 386
BsuTUI ATCGAT 1 cut(s) 492
BtgZI GCGATG 1 cut(s) 1779
BtsCI GGATG 4 cut(s) 403, 480, 1294, 1648
BtsI GCAGTG 1 cut(s) 241
BtsIMutI CAGTG 6 cut(s) 241, 327, 458, 1051, 1735, 1808
BtuMI TCGCGA 1 cut(s) 516
BveI ACCTGC 1 cut(s) 234
Cac8I GCNNGC 2 cut(s) 503, 1302
CciI TCATGA 1 cut(s) 826
CfoI GCGC 1 cut(s) 1306
Cfr13I GGNCC 6 cut(s) 474, 718, 733, 768, 934, 1601
ClaI ATCGAT 1 cut(s) 492
Csp6I GTAC 5 cut(s) 535, 628, 655, 901, 1751
CviAII CATG 6 cut(s) 70, 294, 827, 1151, 1619, 1754
CviQI GTAC 5 cut(s) 535, 628, 655, 901, 1751
DdeI CTNAG 4 cut(s) 314, 425, 864, 1413
DpnI GATC 9 cut(s) 333, 470, 707, 858, 948, 1173, 1197, 1540, 1759
DpnII GATC 9 cut(s) 331, 468, 705, 856, 946, 1171, 1195, 1538, 1757
EaeI YGGCCR 5 cut(s) 3, 15, 33, 72, 103
Eam1104I CTCTTC 3 cut(s) 1083, 1248, 1681
EarI CTCTTC 3 cut(s) 1083, 1248, 1681
EciI GGCGGA 2 cut(s) 560, 1287
Eco24I GRGCYC 2 cut(s) 126, 313
Eco47I GGWCC 4 cut(s) 474, 718, 768, 1601
Eco57I CTGAAG 2 cut(s) 1017, 1112
EcoO109I RGGNCCY 3 cut(s) 733, 768, 934
EcoRII CCWGG 1 cut(s) 259
EcoT38I GRGCYC 2 cut(s) 126, 313
FaeI CATG 6 cut(s) 73, 297, 830, 1154, 1622, 1757
FalI AAGNNNNNCTT 6 cut(s) 614, 646, 755, 787, 1110, 1142
FaqI GGGAC 3 cut(s) 192, 623, 890
FatI CATG 6 cut(s) 69, 293, 826, 1150, 1618, 1753
FbaI TGATCA 1 cut(s) 331
FblI GTMKAC 2 cut(s) 1343, 1764
Fnu4HI GCNGC 7 cut(s) 241, 367, 370, 422, 892, 964, 1491
FokI GGATG 4 cut(s) 390, 467, 1281, 1655
FriOI GRGCYC 2 cut(s) 126, 313
Fsp4HI GCNGC 7 cut(s) 241, 367, 370, 422, 892, 964, 1491
FspBI CTAG 3 cut(s) 1262, 1473, 1523
GlaI GCGC 1 cut(s) 1305
GluI GCNGC 7 cut(s) 241, 367, 370, 422, 892, 964, 1491
GsaI CCCAGC 1 cut(s) 310
GsuI CTGGAG 1 cut(s) 1784
HapII CCGG 1 cut(s) 738
HhaI GCGC 1 cut(s) 1306
Hin1II CATG 6 cut(s) 73, 297, 830, 1154, 1622, 1757
Hin6I GCGC 1 cut(s) 1304
HinP1I GCGC 1 cut(s) 1304
HindIII AAGCTT 1 cut(s) 205
HinfI GANTC 7 cut(s) 399, 448, 461, 1132, 1283, 1501, 1550
HpaII CCGG 1 cut(s) 738
HphI GGTGA 1 cut(s) 1326
Hpy166II GTNNAC 3 cut(s) 537, 1344, 1765
Hpy188I TCNGA 9 cut(s) 315, 412, 856, 910, 919, 1131, 1243, 1480, 1543
Hpy188III TCNNGA 7 cut(s) 472, 515, 617, 827, 1014, 1280, 1505
Hpy8I GTNNAC 3 cut(s) 537, 1344, 1765
Hpy99I CGWCG 1 cut(s) 416
HpyAV CCTTC 6 cut(s) 686, 787, 1154, 1208, 1416, 1658
HpyCH4III ACNGT 4 cut(s) 382, 722, 1689, 1702
HpyCH4IV ACGT 1 cut(s) 787
HpyCH4V TGCA 9 cut(s) 224, 456, 501, 593, 725, 966, 1318, 1493, 1778
HpyF10VI GCNNNNNNNGC 5 cut(s) 213, 240, 731, 963, 1790
HpyF3I CTNAG 4 cut(s) 314, 425, 864, 1413
HpySE526I ACGT 1 cut(s) 787
Hsp92II CATG 6 cut(s) 73, 297, 830, 1154, 1622, 1757
HspAI GCGC 1 cut(s) 1304
Ksp22I TGATCA 1 cut(s) 331
Kzo9I GATC 9 cut(s) 331, 468, 705, 856, 946, 1171, 1195, 1538, 1757
LguI GCTCTTC 1 cut(s) 1248
LmnI GCTCC 7 cut(s) 297, 418, 677, 746, 1526, 1790, 1803
Lsp1109I GCAGC 5 cut(s) 353, 408, 878, 950, 1477
LweI GCATC 4 cut(s) 1019, 1327, 1478, 1802
MaeI CTAG 3 cut(s) 1262, 1473, 1523
MaeII ACGT 1 cut(s) 787
MaeIII GTNAC 4 cut(s) 428, 519, 1332, 1730
MalI GATC 9 cut(s) 333, 470, 707, 858, 948, 1173, 1197, 1540, 1759
MboI GATC 9 cut(s) 331, 468, 705, 856, 946, 1171, 1195, 1538, 1757
MhlI GDGCHC 2 cut(s) 126, 313
MlsI TGGCCA 5 cut(s) 5, 17, 35, 74, 105
MluCI AATT 7 cut(s) 563, 1038, 1154, 1234, 1451, 1573, 1627
MluNI TGGCCA 5 cut(s) 5, 17, 35, 74, 105
MlyI GAGTC 1 cut(s) 455
MmeI TCCRAC 2 cut(s) 435, 699
Mox20I TGGCCA 5 cut(s) 5, 17, 35, 74, 105
MroXI GAANNNNTTC 3 cut(s) 566, 1122, 1234
MscI TGGCCA 5 cut(s) 5, 17, 35, 74, 105
MslI CAYNNNNRTG 2 cut(s) 11, 1362
Msp20I TGGCCA 5 cut(s) 5, 17, 35, 74, 105
MspI CCGG 1 cut(s) 738
MspR9I CCNGG 2 cut(s) 261, 738
MvaI CCWGG 1 cut(s) 261
MvnI CGCG 2 cut(s) 516, 643
MwoI GCNNNNNNNGC 5 cut(s) 213, 240, 731, 963, 1790
NciI CCSGG 1 cut(s) 738
NdeII GATC 9 cut(s) 331, 468, 705, 856, 946, 1171, 1195, 1538, 1757
NlaIII CATG 6 cut(s) 73, 297, 830, 1154, 1622, 1757
NlaIV GGNNCC 4 cut(s) 50, 735, 742, 936
NmuCI GTSAC 3 cut(s) 428, 1332, 1730
NruI TCGCGA 1 cut(s) 516
NspV TTCGAA 1 cut(s) 202
PagI TCATGA 1 cut(s) 826
PaqCI CACCTGC 1 cut(s) 234
PciSI GCTCTTC 1 cut(s) 1248
PcsI WCGNNNNNNNCGW 1 cut(s) 513
PdmI GAANNNNTTC 3 cut(s) 566, 1122, 1234
PfeI GAWTC 6 cut(s) 399, 448, 1132, 1283, 1501, 1550
PkrI GCNGC 7 cut(s) 242, 368, 371, 423, 893, 965, 1492
Ple19I CGATCG 1 cut(s) 949
PleI GAGTC 1 cut(s) 455
PpsI GAGTC 1 cut(s) 455
PpuMI RGGWCCY 1 cut(s) 768
Psp5II RGGWCCY 1 cut(s) 768
Psp6I CCWGG 1 cut(s) 259
PspFI CCCAGC 1 cut(s) 306
PspGI CCWGG 1 cut(s) 259
PspN4I GGNNCC 4 cut(s) 50, 735, 742, 936
PspPI GGNCC 6 cut(s) 474, 718, 733, 768, 934, 1601
PspPPI RGGWCCY 1 cut(s) 768
PsrI GAACNNNNNNTAC 2 cut(s) 1017, 1049
PstI CTGCAG 1 cut(s) 968
PvuI CGATCG 1 cut(s) 949
RruI TCGCGA 1 cut(s) 516
RsaI GTAC 5 cut(s) 536, 629, 656, 902, 1752
RsaNI GTAC 5 cut(s) 535, 628, 655, 901, 1751
RseI CAYNNNNRTG 2 cut(s) 11, 1362
SapI GCTCTTC 1 cut(s) 1248
SatI GCNGC 7 cut(s) 241, 367, 370, 422, 892, 964, 1491
Sau3AI GATC 9 cut(s) 331, 468, 705, 856, 946, 1171, 1195, 1538, 1757
Sau96I GGNCC 6 cut(s) 474, 718, 733, 768, 934, 1601
SchI GAGTC 1 cut(s) 455
ScrFI CCNGG 2 cut(s) 261, 738
SduI GDGCHC 2 cut(s) 126, 313
SfaNI GCATC 4 cut(s) 1019, 1327, 1478, 1802
SfcI CTRYAG 3 cut(s) 684, 958, 964
SfuI TTCGAA 1 cut(s) 202
SinI GGWCC 4 cut(s) 474, 718, 768, 1601
SmiMI CAYNNNNRTG 2 cut(s) 11, 1362
Sse9I AATT 7 cut(s) 563, 1038, 1154, 1234, 1451, 1573, 1627
SsiI CCGC 7 cut(s) 240, 369, 545, 641, 1148, 1298, 1467
SspI AATATT 2 cut(s) 132, 1429
SspMI CTAG 3 cut(s) 1262, 1473, 1523
StyD4I CCNGG 2 cut(s) 259, 736
TaaI ACNGT 4 cut(s) 382, 722, 1689, 1702
TaiI ACGT 1 cut(s) 790
TaqI TCGA 3 cut(s) 202, 492, 949
TaqII GACCGA 1 cut(s) 1618
TasI AATT 7 cut(s) 563, 1038, 1154, 1234, 1451, 1573, 1627
TatI WGTACW 3 cut(s) 654, 900, 1750
TauI GCSGC 2 cut(s) 243, 372
TfiI GAWTC 6 cut(s) 399, 448, 1132, 1283, 1501, 1550
TscAI CASTG 6 cut(s) 241, 334, 458, 1051, 1735, 1808
TseFI GTSAC 3 cut(s) 428, 1332, 1730
TseI GCWGC 5 cut(s) 366, 421, 891, 963, 1490
Tsp45I GTSAC 3 cut(s) 428, 1332, 1730
TspDTI ATGAA 8 cut(s) 171, 815, 1074, 1167, 1205, 1380, 1542, 1621
TspGWI ACGGA 1 cut(s) 1611
TspRI CASTG 6 cut(s) 241, 334, 458, 1051, 1735, 1808
VpaK11BI GGWCC 4 cut(s) 474, 718, 768, 1601
XapI RAATTY 1 cut(s) 563
XmiI GTMKAC 2 cut(s) 1343, 1764
XmnI GAANNNNTTC 3 cut(s) 566, 1122, 1234
XspI CTAG 3 cut(s) 1262, 1473, 1523
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.