Rh1AG134100
NAC Family

(NAC) domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0000639
Physical Location & Seq
Reverse (-)
25661731 .. 25669986
8256 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG134100.1

Sequence Viewer

Length: 1551 bp
ATGAGCTGCGACCATTTACCAGTGCCACCGGAATACCGATTCCGTCCCACCAAAACGGAGCTGCTGTGTGACCACTTGGCGAAGAAGAATCGGTGCAAGGACTCCCAAATCATGTCGATCATGCCTGTAATCGATCTGTGCAAGCACGAGCCTCGTGAGCTACCAGGACTGGCGTTCACAAGGCAGGAAAATCTGGGAAGGAAACTTTACTTCGATTTCTTCTTTCGGTTTACAAGGGCAGAGTCTTGGTATAGTCAGGGCAAGTGGTACTTCTTCGCACCGCGTGAATACAAGTACCCTAACAGCACTCGCTCCAACAGGACTACAGGGGAGGGGTCCTGGAAGGTCACGGGCAAGGACCGCGACATCAAGGCCCCGGGCTCCGAAGCTGTGATTGGGAGGAAGAGGATCTTGACCTTCCAAAAACGTGGAGTGCCGAAATCACACAAGAGCGGCTGGGTTATTCATGAGTATTATCACATTCAGCCCCATTCTGACCCTCCTAAGCAGATAGGGGACTTTGTTGTCTGTTGCTTGAAGTACAAGCCTGTCTCTGATCATGATGAGGATGCTCCATTCTGCAATCGAGGTAGCGGTAGCGGTAGCGGTAGCTGCAGTATGGTTTCCAATGTTGCAAATCAGGCTGAAGAAAATTTGGCGTCCAATGAGCAGTTTAATGGCACTGATGATGAAGCTGAAACTGGTGGCGGTTGGATTACTGAAGCAGAACAACACCTGGCATATAAGAGAGATGGTCTTCGGACTGCCATTGGAAATCAGAATGAATTCCAAGGCTCGCAGACTGATCCTTGTAATCTTTGGACCTCTGTTGAAGGTCAAGCTGATAGAAGCAATTCGTCTCATATGATTGAAGAGCGACTAGATGATCCAGAAAATATGGATTCATTCTTTCATCCACCTGGGCCCCCTCAACTGCATCAGCTACATCAGTCACCGATGTATACCACCAATGTCCAGAATGATGAATGCCGTAAGAGGAAATATCCATTTGAAGATAATGAATCTTCTCTTACGAAGAAGAAAAATATTTCAACCAATGATGGTGATGAACTAGTCAGCAACACCACTGCTAATTCTGAAAACCAAGCTGCAGATGTGATCCTAGAGGGTGACTCTGTTATCTGTCGCTTGAAGAATAAATCAGATAAGAAGGATTCTCTGGTAAGTGATGAAGGGGAACCGGATAGCGCAGGTGTGTCTAACTGGAAAATTCAAGCGGCACACAAAAATGATGAACCACTTTTACATCAACCTCAGCGTCTGGATGACTGCTGCTCCTCTGCAGTGCGGTCACCGGCATCCCCAGAGCTGGAAGTTGTTCTGCAATTAGCCAATGGTGATGATTGTAATAAGTTGCAATCACCATGTGGAGATAATACTTCTTGTCTAGAAGACAAGAATGAAGTTTCAACCTGTGATGAAGATGAGACTATGGATGGTGTGTTTCTACAGATTTCCACTCATGATGCAAGTCATTCCATACAGTTGAACTTGCTTCCGAAGCTCAGGACATTCAGTTCAAAGCACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

516

Amino Acids

58.06

Weight (kDa)

5.44

Isoelectric Point (pI)

52.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 9 - 158 1.2e-26 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000639)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020
rosa_chinensis RchiOBHm_Chr1g0324821 RchiOBHm_Chr1g0333801 RchiOBHm_Chr1g0361601 RchiOBHm_Chr1g0361611 RchiOBHm_Chr1g0361661
rosa_laevigata RLG00000027711 RLG00000027712 RLG00000027714 RLG00000027715 RLG00000027716 RLG00000029530 RLG00000029531 RLG00000030172
rosa_multiflora Rmu_co8302323.1_g000001 Rmu_co8459497.1_g000001 Rmu_sc0003426.1_g000013 Rmu_sc0003693.1_g000002 Rmu_sc0003693.1_g000003 Rmu_sc0003704.1_g000001 Rmu_sc0003704.1_g000002 Rmu_sc0006101.1_g000001 Rmu_sc0006101.1_g000010 Rmu_sc0006417.1_g000001 Rmu_sc0006417.1_g000002 Rmu_sc0006417.1_g000005 Rmu_sc0007217.1_g000011 Rmu_sc0010981.1_g000006 Rmu_sc0011258.1_g000006 Rmu_sc0017253.1_g000003 Rmu_sc0017253.1_g000004 Rmu_sc0017750.1_g000001 Rmu_sc0026316.1_g000001 Rmu_sc0038193.1_g000002 Rmu_sc0041549.1_g000001
rosa_roxburghii Rroxscaffold_159G00433000 Rroxscaffold_159G00433050 Rroxscaffold_159G00433080 Rroxscaffold_4G00294830 Rroxscaffold_4G00294840 Rroxscaffold_4G00294900 Rroxscaffold_4G00294910 Rroxscaffold_4G00294920 Rroxscaffold_4G00317230 Rroxscaffold_4G00325170 Rroxscaffold_4G00325200 Rroxscaffold_4G00325280
rosa_rugosa Rorug01G0048000 Rorug01G0111600 Rorug01G0111700 Rorug01G0290200 Rorug01G0290300 Rorug01G0290300 Rorug01G0290400 Rorug01G0290600
rosa_samantha Rh1AG064300 Rh1AG064500 Rh1AG134000 Rh1AG134100 Rh1AG300500 Rh1AG300600
rosa_wichuraiana Rw1G005340 Rw1G005390 Rw1G005420 Rw1G011180 Rw1G011190 Rw1G026650 Rw1G026660 Rw1G026680 Rw1G026690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1202
AasI GACNNNNNNGTC 1 cut(s) 524
Acc36I ACCTGC 1 cut(s) 1202
AccBSI CCGCTC 1 cut(s) 453
AccI GTMKAC 1 cut(s) 962
AccII CGCG 2 cut(s) 283, 363
AciI CCGC 9 cut(s) 281, 361, 453, 594, 600, 606, 708, 1238, 1309
AclWI GGATC 4 cut(s) 416, 800, 881, 1114
AcsI RAATTY 3 cut(s) 652, 785, 1230
AcuI CTGAAG 2 cut(s) 666, 741
AcyI GRCGYC 1 cut(s) 659
AdeI CACNNNGTG 2 cut(s) 284, 1388
AfaI GTAC 3 cut(s) 269, 296, 542
AfiI CCNNNNNNNGG 1 cut(s) 1330
AhlI ACTAGT 1 cut(s) 1072
AjnI CCWGG 4 cut(s) 163, 338, 735, 919
AjuI GAANNNNNNNTTGG 2 cut(s) 378, 410
AloI GAACNNNNNNTCC 1 cut(s) 1522
Alw26I GTCTC 3 cut(s) 556, 864, 1442
AlwI GGATC 4 cut(s) 416, 800, 881, 1114
AlwNI CAGNNNCTG 1 cut(s) 1282
Ama87I CYCGRG 1 cut(s) 376
AoxI GGCC 2 cut(s) 372, 923
ApaI GGGCCC 1 cut(s) 927
ApeKI GCWGC 5 cut(s) 6, 61, 612, 1109, 1293
ApoI RAATTY 3 cut(s) 652, 785, 1230
Asp700I GAANNNNTTC 3 cut(s) 785, 853, 1338
AspLEI GCGC 1 cut(s) 1211
AspS9I GGNCC 6 cut(s) 336, 358, 373, 822, 923, 924
AsuC2I CCSGG 2 cut(s) 377, 378
AsuHPI GGTGA 6 cut(s) 945, 1076, 1142, 1305, 1370, 1374
AvaI CYCGRG 1 cut(s) 376
AvaII GGWCC 3 cut(s) 336, 358, 822
BaeGI GKGCMC 1 cut(s) 927
BanII GRGCYC 2 cut(s) 383, 927
BauI CACGAG 2 cut(s) 146, 153
BbsI GAAGAC 2 cut(s) 749, 1419
BbvCI CCTCAGC 1 cut(s) 1275
BbvI GCAGC 4 cut(s) 48, 599, 1096, 1280
BccI CCATC 3 cut(s) 746, 1055, 1451
BceAI ACGGC 1 cut(s) 975
BcgI CGANNNNNNTGC 2 cut(s) 134, 168
BciT130I CCWGG 4 cut(s) 165, 340, 737, 921
BclI TGATCA 1 cut(s) 556
BcnI CCSGG 2 cut(s) 377, 378
BcoDI GTCTC 3 cut(s) 556, 864, 1442
BcuI ACTAGT 1 cut(s) 1072
BfaI CTAG 5 cut(s) 881, 1073, 1124, 1409, 1549
BfmI CTRYAG 5 cut(s) 324, 613, 1110, 1302, 1469
BfuAI ACCTGC 1 cut(s) 1202
BisI GCNGC 7 cut(s) 7, 62, 454, 613, 1110, 1239, 1294
BlsI GCNGC 7 cut(s) 8, 63, 455, 614, 1111, 1240, 1295
Bme1390I CCNGG 6 cut(s) 165, 340, 377, 378, 737, 921
Bme18I GGWCC 3 cut(s) 336, 358, 822
BmeT110I CYCGRG 1 cut(s) 376
BmgT120I GGNCC 6 cut(s) 336, 358, 373, 822, 923, 924
BmiI GGNNCC 6 cut(s) 337, 375, 382, 925, 926, 1200
BmrFI CCNGG 6 cut(s) 165, 340, 377, 378, 737, 921
BmsI GCATC 4 cut(s) 559, 946, 1328, 1477
BpiI GAAGAC 2 cut(s) 749, 1419
BplI GAGNNNNNCTC 2 cut(s) 1118, 1150
Bpu10I CCTNAGC 3 cut(s) 504, 1275, 1526
BpuMI CCSGG 2 cut(s) 377, 378
Bsa29I ATCGAT 1 cut(s) 132
BsaHI GRCGYC 1 cut(s) 659
BsaJI CCNNGG 4 cut(s) 375, 376, 790, 920
BsaWI WCCGGW 2 cut(s) 28, 1201
BsaXI ACNNNNNCTCC 4 cut(s) 50, 80, 1280, 1310
Bsc4I CCNNNNNNNGG 1 cut(s) 1330
Bse118I RCCGGY 1 cut(s) 1315
Bse1I ACTGG 4 cut(s) 20, 174, 706, 1229
BseBI CCWGG 4 cut(s) 165, 340, 737, 921
BseCI ATCGAT 1 cut(s) 132
BseDI CCNNGG 4 cut(s) 375, 376, 790, 920
BseGI GGATG 5 cut(s) 574, 913, 1291, 1319, 1462
BseLI CCNNNNNNNGG 1 cut(s) 1330
BseMII CTCAG 2 cut(s) 1289, 1540
BseNI ACTGG 4 cut(s) 20, 174, 706, 1229
BseRI GAGGAG 1 cut(s) 1288
BseSI GKGCMC 1 cut(s) 927
BseXI GCAGC 4 cut(s) 48, 599, 1096, 1280
BseYI CCCAGC 1 cut(s) 456
Bsh1236I CGCG 2 cut(s) 283, 363
BshFI GGCC 2 cut(s) 374, 925
BshVI ATCGAT 1 cut(s) 132
BsiHKCI CYCGRG 1 cut(s) 376
BsiSI CCGG 4 cut(s) 29, 377, 1202, 1316
BslFI GGGAC 2 cut(s) 30, 530
BslI CCNNNNNNNGG 1 cut(s) 1330
BsmAI GTCTC 3 cut(s) 556, 864, 1442
BsmBI CGTCTC 1 cut(s) 864
BsmFI GGGAC 2 cut(s) 30, 530
BsmI GAATGC 1 cut(s) 992
BsnI GGCC 2 cut(s) 374, 925
BsoBI CYCGRG 1 cut(s) 376
Bsp120I GGGCCC 1 cut(s) 923
Bsp1286I GDGCHC 2 cut(s) 383, 927
Bsp143I GATC 7 cut(s) 117, 133, 408, 556, 805, 886, 1119
BspACI CCGC 9 cut(s) 281, 361, 453, 594, 600, 606, 708, 1238, 1309
BspANI GGCC 2 cut(s) 374, 925
BspCNI CTCAG 2 cut(s) 1288, 1539
BspDI ATCGAT 1 cut(s) 132
BspFNI CGCG 2 cut(s) 283, 363
BspHI TCATGA 3 cut(s) 466, 559, 1483
BspLI GGNNCC 6 cut(s) 337, 375, 382, 925, 926, 1200
BspMAI CTGCAG 3 cut(s) 617, 1114, 1306
BspMI ACCTGC 1 cut(s) 1202
BspPI GGATC 4 cut(s) 416, 800, 881, 1114
BspQI GCTCTTC 1 cut(s) 867
BsrBI CCGCTC 1 cut(s) 453
BsrFI RCCGGY 1 cut(s) 1315
BsrI ACTGG 4 cut(s) 20, 174, 706, 1229
BssAI RCCGGY 1 cut(s) 1315
BssECI CCNNGG 4 cut(s) 375, 376, 790, 920
BssMI GATC 7 cut(s) 117, 133, 408, 556, 805, 886, 1119
BssNAI GTATAC 1 cut(s) 963
BssNI GRCGYC 1 cut(s) 659
BssSI CACGAG 2 cut(s) 146, 153
BssT1I CCWWGG 1 cut(s) 790
Bst1107I GTATAC 1 cut(s) 963
Bst2BI CACGAG 2 cut(s) 146, 153
Bst2UI CCWGG 4 cut(s) 165, 340, 737, 921
Bst4CI ACNGT 1 cut(s) 1506
Bst6I CTCTTC 2 cut(s) 398, 867
BstACI GRCGYC 1 cut(s) 659
BstC8I GCNNGC 2 cut(s) 143, 797
BstDEI CTNAG 3 cut(s) 504, 1275, 1526
BstEII GGTNACC 1 cut(s) 1311
BstF5I GGATG 5 cut(s) 574, 913, 1291, 1319, 1462
BstFNI CGCG 2 cut(s) 283, 363
BstHHI GCGC 1 cut(s) 1211
BstKTI GATC 7 cut(s) 120, 136, 411, 559, 808, 889, 1122
BstMAI GTCTC 3 cut(s) 556, 864, 1442
BstMBI GATC 7 cut(s) 117, 133, 408, 556, 805, 886, 1119
BstMWI GCNNNNNNNGC 5 cut(s) 157, 360, 612, 641, 1522
BstNI CCWGG 4 cut(s) 165, 340, 737, 921
BstPI GGTNACC 1 cut(s) 1311
BstSCI CCNGG 6 cut(s) 163, 338, 375, 376, 735, 919
BstSFI CTRYAG 5 cut(s) 324, 613, 1110, 1302, 1469
BstSLI GKGCMC 1 cut(s) 927
BstUI CGCG 2 cut(s) 283, 363
BstV1I GCAGC 4 cut(s) 48, 599, 1096, 1280
BstV2I GAAGAC 2 cut(s) 749, 1419
BstX2I RGATCY 1 cut(s) 408
BstXI CCANNNNNNTGG 1 cut(s) 428
BstYI RGATCY 1 cut(s) 408
BstZ17I GTATAC 1 cut(s) 963
Bsu15I ATCGAT 1 cut(s) 132
BsuRI GGCC 2 cut(s) 374, 925
BsuTUI ATCGAT 1 cut(s) 132
BtsCI GGATG 5 cut(s) 574, 913, 1291, 1319, 1462
BtsI GCAGTG 2 cut(s) 1086, 1311
BtsIMutI CAGTG 4 cut(s) 27, 681, 1086, 1311
BveI ACCTGC 1 cut(s) 1202
Cac8I GCNNGC 2 cut(s) 143, 797
CaiI CAGNNNCTG 1 cut(s) 1282
CciI TCATGA 3 cut(s) 466, 559, 1483
CfoI GCGC 1 cut(s) 1211
Cfr10I RCCGGY 1 cut(s) 1315
Cfr13I GGNCC 6 cut(s) 336, 358, 373, 822, 923, 924
Cfr9I CCCGGG 1 cut(s) 376
ClaI ATCGAT 1 cut(s) 132
CseI GACGC 2 cut(s) 648, 1268
Csp6I GTAC 3 cut(s) 268, 295, 541
CviAII CATG 6 cut(s) 112, 121, 467, 560, 1386, 1484
CviQI GTAC 3 cut(s) 268, 295, 541
DdeI CTNAG 3 cut(s) 504, 1275, 1526
DpnI GATC 7 cut(s) 119, 135, 410, 558, 807, 888, 1121
DpnII GATC 7 cut(s) 117, 133, 408, 556, 805, 886, 1119
DraIII CACNNNGTG 2 cut(s) 284, 1388
DrdI GACNNNNNNGTC 1 cut(s) 524
DseDI GACNNNNNNGTC 1 cut(s) 524
Eam1104I CTCTTC 2 cut(s) 398, 867
EarI CTCTTC 2 cut(s) 398, 867
Eco130I CCWWGG 1 cut(s) 790
Eco24I GRGCYC 2 cut(s) 383, 927
Eco47I GGWCC 3 cut(s) 336, 358, 822
Eco57I CTGAAG 2 cut(s) 666, 741
Eco88I CYCGRG 1 cut(s) 376
Eco91I GGTNACC 1 cut(s) 1311
EcoO109I RGGNCCY 3 cut(s) 336, 373, 924
EcoO65I GGTNACC 1 cut(s) 1311
EcoRI GAATTC 1 cut(s) 785
EcoRII CCWGG 4 cut(s) 163, 338, 735, 919
EcoT14I CCWWGG 1 cut(s) 790
EcoT38I GRGCYC 2 cut(s) 383, 927
ErhI CCWWGG 1 cut(s) 790
Esp3I CGTCTC 1 cut(s) 864
FaeI CATG 6 cut(s) 115, 124, 470, 563, 1389, 1487
FalI AAGNNNNNCTT 4 cut(s) 254, 286, 395, 427
FaqI GGGAC 2 cut(s) 30, 530
FatI CATG 6 cut(s) 111, 120, 466, 559, 1385, 1483
FauNDI CATATG 1 cut(s) 864
FbaI TGATCA 1 cut(s) 556
FblI GTMKAC 1 cut(s) 962
Fnu4HI GCNGC 7 cut(s) 7, 62, 454, 613, 1110, 1239, 1294
FokI GGATG 5 cut(s) 581, 900, 1298, 1306, 1469
FriOI GRGCYC 2 cut(s) 383, 927
Fsp4HI GCNGC 7 cut(s) 7, 62, 454, 613, 1110, 1239, 1294
FspBI CTAG 5 cut(s) 881, 1073, 1124, 1409, 1549
GlaI GCGC 1 cut(s) 1210
GluI GCNGC 7 cut(s) 7, 62, 454, 613, 1110, 1239, 1294
GsaI CCCAGC 1 cut(s) 460
HaeIII GGCC 2 cut(s) 374, 925
HapII CCGG 4 cut(s) 29, 377, 1202, 1316
HgaI GACGC 2 cut(s) 648, 1268
HhaI GCGC 1 cut(s) 1211
Hin1I GRCGYC 1 cut(s) 659
Hin1II CATG 6 cut(s) 115, 124, 470, 563, 1389, 1487
Hin6I GCGC 1 cut(s) 1209
HinP1I GCGC 1 cut(s) 1209
HinfI GANTC 8 cut(s) 39, 88, 101, 242, 902, 1022, 1133, 1175
HpaII CCGG 4 cut(s) 29, 377, 1202, 1316
HphI GGTGA 6 cut(s) 945, 1076, 1142, 1305, 1370, 1374
Hpy166II GTNNAC 3 cut(s) 177, 231, 963
Hpy188I TCNGA 8 cut(s) 385, 496, 556, 762, 780, 1099, 1165, 1521
Hpy8I GTNNAC 3 cut(s) 177, 231, 963
HpyAV CCTTC 6 cut(s) 192, 337, 427, 827, 1165, 1187
HpyCH4III ACNGT 1 cut(s) 1506
HpyCH4IV ACGT 1 cut(s) 427
HpyF10VI GCNNNNNNNGC 5 cut(s) 157, 360, 612, 641, 1522
HpyF3I CTNAG 3 cut(s) 504, 1275, 1526
HpySE526I ACGT 1 cut(s) 427
Hsp92I GRCGYC 1 cut(s) 659
Hsp92II CATG 6 cut(s) 115, 124, 470, 563, 1389, 1487
HspAI GCGC 1 cut(s) 1209
Ksp22I TGATCA 1 cut(s) 556
Kzo9I GATC 7 cut(s) 117, 133, 408, 556, 805, 886, 1119
LguI GCTCTTC 1 cut(s) 867
LmnI GCTCC 5 cut(s) 58, 317, 386, 577, 1301
Lsp1109I GCAGC 4 cut(s) 48, 599, 1096, 1280
LweI GCATC 4 cut(s) 559, 946, 1328, 1477
MaeI CTAG 5 cut(s) 881, 1073, 1124, 1409, 1549
MaeII ACGT 1 cut(s) 427
MaeIII GTNAC 5 cut(s) 68, 346, 951, 1130, 1311
MalI GATC 7 cut(s) 119, 135, 410, 558, 807, 888, 1121
MbiI CCGCTC 1 cut(s) 453
MboI GATC 7 cut(s) 117, 133, 408, 556, 805, 886, 1119
MflI RGATCY 1 cut(s) 408
MhlI GDGCHC 2 cut(s) 383, 927
MluCI AATT 6 cut(s) 652, 785, 853, 1093, 1230, 1346
MlyI GAGTC 3 cut(s) 95, 251, 1127
MmeI TCCRAC 2 cut(s) 339, 692
MroXI GAANNNNTTC 3 cut(s) 785, 853, 1338
MseI TTAA 1 cut(s) 675
MslI CAYNNNNRTG 1 cut(s) 1248
MspI CCGG 4 cut(s) 29, 377, 1202, 1316
MspR9I CCNGG 6 cut(s) 165, 340, 377, 378, 737, 921
Mva1269I GAATGC 1 cut(s) 992
MvaI CCWGG 4 cut(s) 165, 340, 737, 921
MvnI CGCG 2 cut(s) 283, 363
MwoI GCNNNNNNNGC 5 cut(s) 157, 360, 612, 641, 1522
NciI CCSGG 2 cut(s) 377, 378
NdeI CATATG 1 cut(s) 864
NdeII GATC 7 cut(s) 117, 133, 408, 556, 805, 886, 1119
NlaIII CATG 6 cut(s) 115, 124, 470, 563, 1389, 1487
NlaIV GGNNCC 6 cut(s) 337, 375, 382, 925, 926, 1200
NmuCI GTSAC 5 cut(s) 68, 346, 951, 1130, 1311
PagI TCATGA 3 cut(s) 466, 559, 1483
PaqCI CACCTGC 1 cut(s) 1202
PciSI GCTCTTC 1 cut(s) 867
PctI GAATGC 1 cut(s) 992
PdmI GAANNNNTTC 3 cut(s) 785, 853, 1338
PfeI GAWTC 5 cut(s) 39, 88, 902, 1022, 1175
PfoI TCCNGGA 1 cut(s) 338
PkrI GCNGC 7 cut(s) 8, 63, 455, 614, 1111, 1240, 1295
PleI GAGTC 3 cut(s) 95, 250, 1127
PpsI GAGTC 3 cut(s) 95, 250, 1127
PpuMI RGGWCCY 1 cut(s) 336
Psp5II RGGWCCY 1 cut(s) 336
Psp6I CCWGG 4 cut(s) 163, 338, 735, 919
PspEI GGTNACC 1 cut(s) 1311
PspFI CCCAGC 1 cut(s) 456
PspGI CCWGG 4 cut(s) 163, 338, 735, 919
PspN4I GGNNCC 6 cut(s) 337, 375, 382, 925, 926, 1200
PspOMI GGGCCC 1 cut(s) 923
PspPI GGNCC 6 cut(s) 336, 358, 373, 822, 923, 924
PspPPI RGGWCCY 1 cut(s) 336
PsrI GAACNNNNNNTAC 2 cut(s) 1248, 1280
PstI CTGCAG 3 cut(s) 617, 1114, 1306
PstNI CAGNNNCTG 1 cut(s) 1282
PsuI RGATCY 1 cut(s) 408
RsaI GTAC 3 cut(s) 269, 296, 542
RsaNI GTAC 3 cut(s) 268, 295, 541
RseI CAYNNNNRTG 1 cut(s) 1248
SapI GCTCTTC 1 cut(s) 867
SaqAI TTAA 1 cut(s) 675
SatI GCNGC 7 cut(s) 7, 62, 454, 613, 1110, 1239, 1294
Sau3AI GATC 7 cut(s) 117, 133, 408, 556, 805, 886, 1119
Sau96I GGNCC 6 cut(s) 336, 358, 373, 822, 923, 924
SchI GAGTC 3 cut(s) 95, 251, 1127
ScrFI CCNGG 6 cut(s) 165, 340, 377, 378, 737, 921
SduI GDGCHC 2 cut(s) 383, 927
SfaNI GCATC 4 cut(s) 559, 946, 1328, 1477
SfcI CTRYAG 5 cut(s) 324, 613, 1110, 1302, 1469
SinI GGWCC 3 cut(s) 336, 358, 822
SmaI CCCGGG 1 cut(s) 378
SmiMI CAYNNNNRTG 1 cut(s) 1248
SpeI ACTAGT 1 cut(s) 1072
Sse9I AATT 6 cut(s) 652, 785, 853, 1093, 1230, 1346
SsiI CCGC 9 cut(s) 281, 361, 453, 594, 600, 606, 708, 1238, 1309
SspI AATATT 1 cut(s) 1048
SspMI CTAG 5 cut(s) 881, 1073, 1124, 1409, 1549
StyD4I CCNGG 6 cut(s) 163, 338, 375, 376, 735, 919
StyI CCWWGG 1 cut(s) 790
TaaI ACNGT 1 cut(s) 1506
TaiI ACGT 1 cut(s) 430
TaqI TCGA 4 cut(s) 116, 132, 213, 586
TasI AATT 6 cut(s) 652, 785, 853, 1093, 1230, 1346
TatI WGTACW 1 cut(s) 540
TauI GCSGC 2 cut(s) 456, 1241
TfiI GAWTC 5 cut(s) 39, 88, 902, 1022, 1175
Tru1I TTAA 1 cut(s) 675
Tru9I TTAA 1 cut(s) 675
TscAI CASTG 4 cut(s) 27, 688, 1093, 1311
TseFI GTSAC 5 cut(s) 68, 346, 951, 1130, 1311
TseI GCWGC 5 cut(s) 6, 61, 612, 1109, 1293
Tsp45I GTSAC 5 cut(s) 68, 346, 951, 1130, 1311
TspGWI ACGGA 2 cut(s) 32, 71
TspMI CCCGGG 1 cut(s) 376
TspRI CASTG 4 cut(s) 27, 688, 1093, 1311
VpaK11BI GGWCC 3 cut(s) 336, 358, 822
XapI RAATTY 3 cut(s) 652, 785, 1230
XbaI TCTAGA 1 cut(s) 1408
XmaI CCCGGG 1 cut(s) 376
XmiI GTMKAC 1 cut(s) 962
XmnI GAANNNNTTC 3 cut(s) 785, 853, 1338
XspI CTAG 5 cut(s) 881, 1073, 1124, 1409, 1549
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.