Rmu_sc0006417.1_g000002
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006417.1
OG0000639
Physical Location & Seq
Forward (+)
20093 .. 24702
4610 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006417.1_g000002.1.cds

Sequence Viewer

Length: 2199 bp
atgagctgccaaattttcccaattccacaggaataccgattccgtcccaccaaaaaggagctgctgtgtgaccacttggagaagaagaatcagtgcaaggactcccaaagcatgtccatcatccctgaaatcgatctatgcaagcacgagcctcgtgagctaccaggactggtgttcacagggcaggaaaatctggggaggaaacttttcttctttttcttcttttggtttacaaggccggcagagtcttgggatagtcagggcaagtggtacttcttcgctccgcgtgattacaagtacgctaacagcactcgctccaacaggactacaggggaagggttctggaagcccacaggcaaggtccgcgacatcaaggccccgggctccaaagctgtgattggcagaaagaggatcttaaccttccaaaaacatggagagccgaaaccccagaagaccggctgggtcattcatgagtattatctcattgaggcacaatctgatcgccctaagcagataggggactttgttgtatgttgcttgaagtacaagtcagacaactctgatcatgatgaggatgctccattctgcaatccaggtagcggtagctgcagtatggcctccagtgttgcaaaccaggctgaagaaaatttggcatccaatgagcagtttaatggcactgattatgaagctgaaactggtggcggtaggattactgaagcagaagaacacctggcatataagaagctgagagatgagcttcggattcccattggaaatcagaatgaattcgaaggctcgcaaactgatccttataatctttggacctctgttgaaggtcaagctgatagaagcaattcgtctcatatgattgaagagcgactaaatgatccagaaatgcatgagcaacatcagtcaccgatgtataccaccaatgtccagaatgatggatgccgtaagaggaaatatccatttgaagataatgactcttctcttgcgaataagaagaacaatatttcaaccaatgatggtgatgaactagtctacaacaccacttctaattctgaaaaccaagctgcagatgtgatcctagagggtgactctgttgtcttttgcttgaagaataaatcagataagaaggattttctcgtaagtgatgaaggggaaccggatggcacgggtgtgtctaattggaaaattcatgcggcacacaaaaatgatgaaccactttttcatcaacctcagcctctggatgactgctgctcctctgcagtgcggtcacgggcatccctagagctggaagctattctgcaagccattggcactaatgatgattgtaataagttgcaatcaccatgtggagatagtacttcttgtctagaagacaggaatgaagtttcaacctgtgatgaagatgagaatatggatggtgtgtttccacagctatgtgacccaccagaagtaaatctagattcatttttgcgtccacttcaaccacaagattactgcccctccatactgcagtcaccaatatacccaaagttgggaaatgttccaaattccgatctctgttttagtgaatgcaatgattggcaatttgcatttaagaaaaaaatttcaaccaatgaagttgacataccagttagacatatcatgtctaattttgaacatcaagctacagattctaggattctagaggtgagaatggtgcatcgtcaagccaaacaaaatatggagtcagcattttatccatttcagccacaagattcagctttgcagtcaatgatgtacacaatgcatggagatgctttgcataatattgaatgcaatgagttgcaatcttactcttccgatcaaacagctcagactccctccgtagactccaacctactgaagcattgggaagggtctacgatagggatagtggaaatggccactgggcagatctcactttcctcaccaaacagtaatcccaaaaccagaggcctcttcttcttcctccctctattgccgcaacatttccaggcgtcggaacttcaccgagatttcggagaaggcttcaaaatgatggctagtgtccaggctgctttttatgggagtgagaattgtgtgcttgacccaaccctatttcgtgaagttgtagactacaaggtagctgagcatgaacagagaagaaaattggcagctggagagaaaatttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

732

Amino Acids

83.03

Weight (kDa)

5.06

Isoelectric Point (pI)

54.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000639)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020
rosa_chinensis RchiOBHm_Chr1g0324821 RchiOBHm_Chr1g0333801 RchiOBHm_Chr1g0361601 RchiOBHm_Chr1g0361611 RchiOBHm_Chr1g0361661
rosa_laevigata RLG00000027711 RLG00000027712 RLG00000027714 RLG00000027715 RLG00000027716 RLG00000029530 RLG00000029531 RLG00000030172
rosa_multiflora Rmu_co8302323.1_g000001 Rmu_co8459497.1_g000001 Rmu_sc0003426.1_g000013 Rmu_sc0003693.1_g000002 Rmu_sc0003693.1_g000003 Rmu_sc0003704.1_g000001 Rmu_sc0003704.1_g000002 Rmu_sc0006101.1_g000001 Rmu_sc0006101.1_g000010 Rmu_sc0006417.1_g000001 Rmu_sc0006417.1_g000002 Rmu_sc0006417.1_g000005 Rmu_sc0007217.1_g000011 Rmu_sc0010981.1_g000006 Rmu_sc0011258.1_g000006 Rmu_sc0017253.1_g000003 Rmu_sc0017253.1_g000004 Rmu_sc0017750.1_g000001 Rmu_sc0026316.1_g000001 Rmu_sc0038193.1_g000002 Rmu_sc0041549.1_g000001
rosa_roxburghii Rroxscaffold_159G00433000 Rroxscaffold_159G00433050 Rroxscaffold_159G00433080 Rroxscaffold_4G00294830 Rroxscaffold_4G00294840 Rroxscaffold_4G00294900 Rroxscaffold_4G00294910 Rroxscaffold_4G00294920 Rroxscaffold_4G00317230 Rroxscaffold_4G00325170 Rroxscaffold_4G00325200 Rroxscaffold_4G00325280
rosa_rugosa Rorug01G0048000 Rorug01G0111600 Rorug01G0111700 Rorug01G0290200 Rorug01G0290300 Rorug01G0290300 Rorug01G0290400 Rorug01G0290600
rosa_samantha Rh1AG064300 Rh1AG064500 Rh1AG134000 Rh1AG134100 Rh1AG300500 Rh1AG300600
rosa_wichuraiana Rw1G005340 Rw1G005390 Rw1G005420 Rw1G011180 Rw1G011190 Rw1G026650 Rw1G026660 Rw1G026680 Rw1G026690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 813
AasI GACNNNNNNGTC 1 cut(s) 1103
AccI GTMKAC 5 cut(s) 923, 1041, 1875, 1907, 2139
AccII CGCG 2 cut(s) 286, 366
AciI CCGC 7 cut(s) 284, 364, 600, 702, 1202, 1273, 2009
AclWI GGATC 4 cut(s) 419, 800, 881, 1078
AcoI YGGCCR 1 cut(s) 1929
AcsI RAATTY 7 cut(s) 12, 646, 785, 1194, 1555, 1611, 2193
AcuI CTGAAG 3 cut(s) 660, 735, 1910
AcyI GRCGYC 1 cut(s) 2024
AdeI CACNNNGTG 1 cut(s) 1355
AfaI GTAC 5 cut(s) 272, 299, 545, 1366, 1787
AfiI CCNNNNNNNGG 5 cut(s) 599, 1294, 1540, 1541, 2026
AhlI ACTAGT 1 cut(s) 1036
AjnI CCWGG 6 cut(s) 163, 592, 633, 729, 2019, 2076
AleI CACNNNNGTG 1 cut(s) 1178
Alw26I GTCTC 1 cut(s) 864
AlwI GGATC 4 cut(s) 419, 800, 881, 1078
AlwNI CAGNNNCTG 1 cut(s) 1246
Ama87I CYCGRG 1 cut(s) 379
AoxI GGCC 5 cut(s) 236, 375, 615, 1929, 1981
ApeKI GCWGC 7 cut(s) 6, 61, 606, 1073, 1257, 2081, 2180
ApoI RAATTY 7 cut(s) 12, 646, 785, 1194, 1555, 1611, 2193
Asp700I GAANNNNTTC 4 cut(s) 206, 785, 853, 1302
AspS9I GGNCC 3 cut(s) 361, 376, 822
AsuC2I CCSGG 2 cut(s) 380, 381
AsuHPI GGTGA 8 cut(s) 906, 1040, 1106, 1341, 1515, 1708, 1947, 2027
AsuII TTCGAA 1 cut(s) 789
AvaI CYCGRG 1 cut(s) 379
AvaII GGWCC 2 cut(s) 361, 822
BalI TGGCCA 1 cut(s) 1931
BanII GRGCYC 1 cut(s) 386
BarI GAAGNNNNNNTAC 2 cut(s) 1617, 1649
BauI CACGAG 2 cut(s) 146, 153
BbsI GAAGAC 2 cut(s) 458, 1386
BbvCI CCTCAGC 1 cut(s) 1239
BbvI GCAGC 6 cut(s) 48, 593, 1060, 1244, 2068, 2192
BccI CCATC 6 cut(s) 125, 938, 1019, 1163, 1418, 2059
BceAI ACGGC 1 cut(s) 936
BcgI CGANNNNNNTGC 2 cut(s) 134, 168
BciT130I CCWGG 6 cut(s) 165, 594, 635, 731, 2021, 2078
BclI TGATCA 1 cut(s) 562
BcnI CCSGG 2 cut(s) 380, 381
BcoDI GTCTC 1 cut(s) 864
BcuI ACTAGT 1 cut(s) 1036
BfaI CTAG 8 cut(s) 1037, 1088, 1289, 1376, 1466, 1683, 1691, 2070
BfmI CTRYAG 6 cut(s) 327, 607, 1074, 1266, 1517, 1674
BglII AGATCT 1 cut(s) 1941
BisI GCNGC 9 cut(s) 7, 62, 607, 1074, 1203, 1258, 2009, 2082, 2181
BlpI GCTNAGC 1 cut(s) 2154
BlsI GCNGC 9 cut(s) 8, 63, 608, 1075, 1204, 1259, 2010, 2083, 2182
BmcAI AGTACT 1 cut(s) 1366
Bme1390I CCNGG 8 cut(s) 165, 380, 381, 594, 635, 731, 2021, 2078
Bme18I GGWCC 2 cut(s) 361, 822
BmeT110I CYCGRG 1 cut(s) 379
BmgT120I GGNCC 3 cut(s) 361, 376, 822
BmiI GGNNCC 3 cut(s) 378, 385, 1164
BmrFI CCNGG 8 cut(s) 165, 380, 381, 594, 635, 731, 2021, 2078
BmrI ACTGGG 1 cut(s) 1944
BmsI GCATC 6 cut(s) 565, 662, 938, 1292, 1717, 1792
BmuI ACTGGG 1 cut(s) 1944
BpiI GAAGAC 2 cut(s) 458, 1386
BplI GAGNNNNNCTC 2 cut(s) 1082, 1114
BpmI CTGGAG 1 cut(s) 604
Bpu10I CCTNAGC 2 cut(s) 507, 1239
Bpu1102I GCTNAGC 1 cut(s) 2154
Bpu14I TTCGAA 1 cut(s) 789
BpuMI CCSGG 2 cut(s) 380, 381
Bsa29I ATCGAT 1 cut(s) 132
BsaHI GRCGYC 1 cut(s) 2024
BsaJI CCNNGG 2 cut(s) 378, 379
BsaWI WCCGGW 1 cut(s) 1165
BsaXI ACNNNNNCTCC 6 cut(s) 50, 80, 1244, 1274, 1493, 1523
Bsc4I CCNNNNNNNGG 5 cut(s) 599, 1294, 1540, 1541, 2026
Bse118I RCCGGY 2 cut(s) 238, 455
Bse1I ACTGG 5 cut(s) 174, 621, 700, 1637, 1939
Bse3DI GCAATG 2 cut(s) 1588, 1831
BseBI CCWGG 6 cut(s) 165, 594, 635, 731, 2021, 2078
BseCI ATCGAT 1 cut(s) 132
BseDI CCNNGG 2 cut(s) 378, 379
BseGI GGATG 8 cut(s) 120, 580, 653, 953, 1174, 1255, 1283, 1429
BseLI CCNNNNNNNGG 5 cut(s) 599, 1294, 1540, 1541, 2026
BseMI GCAATG 2 cut(s) 1588, 1831
BseMII CTCAG 4 cut(s) 737, 1253, 1874, 2145
BseNI ACTGG 5 cut(s) 174, 621, 700, 1637, 1939
BseRI GAGGAG 1 cut(s) 1252
BseXI GCAGC 6 cut(s) 48, 593, 1060, 1244, 2068, 2192
BseYI CCCAGC 1 cut(s) 459
Bsh1236I CGCG 2 cut(s) 286, 366
BshFI GGCC 5 cut(s) 238, 377, 617, 1931, 1983
BshVI ATCGAT 1 cut(s) 132
BsiHKCI CYCGRG 1 cut(s) 379
BsiSI CCGG 4 cut(s) 239, 380, 456, 1166
BslFI GGGAC 2 cut(s) 30, 533
BslI CCNNNNNNNGG 5 cut(s) 599, 1294, 1540, 1541, 2026
BsmAI GTCTC 1 cut(s) 864
BsmBI CGTCTC 1 cut(s) 864
BsmFI GGGAC 2 cut(s) 30, 533
BsmI GAATGC 2 cut(s) 1583, 1826
BsnI GGCC 5 cut(s) 238, 377, 617, 1931, 1983
BsoBI CYCGRG 1 cut(s) 379
Bsp119I TTCGAA 1 cut(s) 789
Bsp1286I GDGCHC 1 cut(s) 386
Bsp1407I TGTACA 1 cut(s) 1785
Bsp1720I GCTNAGC 1 cut(s) 2154
BspACI CCGC 7 cut(s) 284, 364, 600, 702, 1202, 1273, 2009
BspANI GGCC 5 cut(s) 238, 377, 617, 1931, 1983
BspCNI CTCAG 4 cut(s) 738, 1252, 1873, 2146
BspDI ATCGAT 1 cut(s) 132
BspFNI CGCG 2 cut(s) 286, 366
BspHI TCATGA 2 cut(s) 469, 565
BspLI GGNNCC 3 cut(s) 378, 385, 1164
BspMAI CTGCAG 4 cut(s) 611, 1078, 1270, 1521
BspPI GGATC 4 cut(s) 419, 800, 881, 1078
BspQI GCTCTTC 1 cut(s) 867
BspT104I TTCGAA 1 cut(s) 789
BsrDI GCAATG 2 cut(s) 1588, 1831
BsrFI RCCGGY 2 cut(s) 238, 455
BsrGI TGTACA 1 cut(s) 1785
BsrI ACTGG 5 cut(s) 174, 621, 700, 1637, 1939
BssAI RCCGGY 2 cut(s) 238, 455
BssECI CCNNGG 2 cut(s) 378, 379
BssNAI GTATAC 1 cut(s) 924
BssNI GRCGYC 1 cut(s) 2024
BssSI CACGAG 2 cut(s) 146, 153
Bst1107I GTATAC 1 cut(s) 924
Bst2BI CACGAG 2 cut(s) 146, 153
Bst2UI CCWGG 6 cut(s) 165, 594, 635, 731, 2021, 2078
Bst4CI ACNGT 1 cut(s) 1964
Bst6I CTCTTC 4 cut(s) 867, 991, 1849, 1991
BstACI GRCGYC 1 cut(s) 2024
BstAUI TGTACA 1 cut(s) 1785
BstBI TTCGAA 1 cut(s) 789
BstC8I GCNNGC 4 cut(s) 143, 240, 797, 1311
BstDEI CTNAG 5 cut(s) 507, 746, 1239, 1860, 2154
BstF5I GGATG 8 cut(s) 120, 580, 653, 953, 1174, 1255, 1283, 1429
BstFNI CGCG 2 cut(s) 286, 366
BstMAI GTCTC 1 cut(s) 864
BstMWI GCNNNNNNNGC 4 cut(s) 157, 363, 606, 635
BstNI CCWGG 6 cut(s) 165, 594, 635, 731, 2021, 2078
BstNSI RCATGY 1 cut(s) 115
BstSCI CCNGG 8 cut(s) 163, 378, 379, 592, 633, 729, 2019, 2076
BstSFI CTRYAG 6 cut(s) 327, 607, 1074, 1266, 1517, 1674
BstUI CGCG 2 cut(s) 286, 366
BstV1I GCAGC 6 cut(s) 48, 593, 1060, 1244, 2068, 2192
BstV2I GAAGAC 2 cut(s) 458, 1386
BstX2I RGATCY 2 cut(s) 411, 1941
BstXI CCANNNNNNTGG 2 cut(s) 431, 944
BstYI RGATCY 2 cut(s) 411, 1941
BstZ17I GTATAC 1 cut(s) 924
Bsu15I ATCGAT 1 cut(s) 132
BsuRI GGCC 5 cut(s) 238, 377, 617, 1931, 1983
BsuTUI ATCGAT 1 cut(s) 132
BtsCI GGATG 8 cut(s) 120, 580, 653, 953, 1174, 1255, 1283, 1429
BtsI GCAGTG 1 cut(s) 1275
BtsIMutI CAGTG 5 cut(s) 98, 628, 675, 1275, 1932
Cac8I GCNNGC 4 cut(s) 143, 240, 797, 1311
CaiI CAGNNNCTG 1 cut(s) 1246
CciI TCATGA 2 cut(s) 469, 565
Cfr10I RCCGGY 2 cut(s) 238, 455
Cfr13I GGNCC 3 cut(s) 361, 376, 822
Cfr9I CCCGGG 1 cut(s) 379
ClaI ATCGAT 1 cut(s) 132
CseI GACGC 2 cut(s) 1469, 2013
Csp6I GTAC 5 cut(s) 271, 298, 544, 1365, 1786
CviQI GTAC 5 cut(s) 271, 298, 544, 1365, 1786
DdeI CTNAG 5 cut(s) 507, 746, 1239, 1860, 2154
DraIII CACNNNGTG 1 cut(s) 1355
DrdI GACNNNNNNGTC 1 cut(s) 1103
DseDI GACNNNNNNGTC 1 cut(s) 1103
EaeI YGGCCR 1 cut(s) 1929
Eam1104I CTCTTC 4 cut(s) 867, 991, 1849, 1991
EarI CTCTTC 4 cut(s) 867, 991, 1849, 1991
Eco147I AGGCCT 1 cut(s) 1983
Eco24I GRGCYC 1 cut(s) 386
Eco47I GGWCC 2 cut(s) 361, 822
Eco57I CTGAAG 3 cut(s) 660, 735, 1910
Eco88I CYCGRG 1 cut(s) 379
EcoO109I RGGNCCY 1 cut(s) 376
EcoRI GAATTC 1 cut(s) 785
EcoRII CCWGG 6 cut(s) 163, 592, 633, 729, 2019, 2076
EcoT22I ATGCAT 2 cut(s) 900, 1797
EcoT38I GRGCYC 1 cut(s) 386
Esp3I CGTCTC 1 cut(s) 864
FalI AAGNNNNNCTT 4 cut(s) 257, 289, 398, 430
FaqI GGGAC 2 cut(s) 30, 533
FauNDI CATATG 1 cut(s) 864
FbaI TGATCA 1 cut(s) 562
FblI GTMKAC 5 cut(s) 923, 1041, 1875, 1907, 2139
Fnu4HI GCNGC 9 cut(s) 7, 62, 607, 1074, 1203, 1258, 2009, 2082, 2181
FokI GGATG 8 cut(s) 107, 587, 640, 960, 1181, 1262, 1270, 1436
FriOI GRGCYC 1 cut(s) 386
Fsp4HI GCNGC 9 cut(s) 7, 62, 607, 1074, 1203, 1258, 2009, 2082, 2181
FspBI CTAG 8 cut(s) 1037, 1088, 1289, 1376, 1466, 1683, 1691, 2070
GluI GCNGC 9 cut(s) 7, 62, 607, 1074, 1203, 1258, 2009, 2082, 2181
GsaI CCCAGC 1 cut(s) 463
GsuI CTGGAG 1 cut(s) 604
HaeIII GGCC 5 cut(s) 238, 377, 617, 1931, 1983
HapII CCGG 4 cut(s) 239, 380, 456, 1166
HgaI GACGC 2 cut(s) 1469, 2013
Hin1I GRCGYC 1 cut(s) 2024
HincII GTYRAC 1 cut(s) 1630
HindII GTYRAC 1 cut(s) 1630
HpaII CCGG 4 cut(s) 239, 380, 456, 1166
HphI GGTGA 8 cut(s) 906, 1040, 1106, 1341, 1515, 1708, 1947, 2027
Hpy99I CGWCG 1 cut(s) 2029
HpyAV CCTTC 8 cut(s) 329, 430, 785, 827, 1129, 1151, 1895, 2045
HpyCH4III ACNGT 1 cut(s) 1964
HpyF10VI GCNNNNNNNGC 4 cut(s) 157, 363, 606, 635
HpyF3I CTNAG 5 cut(s) 507, 746, 1239, 1860, 2154
Hsp92I GRCGYC 1 cut(s) 2024
KroI GCCGGC 1 cut(s) 238
KroNI GCCGGC 1 cut(s) 240
Ksp22I TGATCA 1 cut(s) 562
LguI GCTCTTC 1 cut(s) 867
LmnI GCTCC 6 cut(s) 58, 286, 320, 389, 583, 1265
Lsp1109I GCAGC 6 cut(s) 48, 593, 1060, 1244, 2068, 2192
LweI GCATC 6 cut(s) 565, 662, 938, 1292, 1717, 1792
MaeI CTAG 8 cut(s) 1037, 1088, 1289, 1376, 1466, 1683, 1691, 2070
MaeIII GTNAC 6 cut(s) 68, 912, 1094, 1275, 1445, 1521
MflI RGATCY 2 cut(s) 411, 1941
MhlI GDGCHC 1 cut(s) 386
MlsI TGGCCA 1 cut(s) 1931
MluNI TGGCCA 1 cut(s) 1931
MlyI GAGTC 7 cut(s) 95, 254, 977, 1091, 1742, 1858, 1871
MmeI TCCRAC 3 cut(s) 342, 1905, 2007
Mox20I TGGCCA 1 cut(s) 1931
Mph1103I ATGCAT 2 cut(s) 900, 1797
MroNI GCCGGC 1 cut(s) 238
MroXI GAANNNNTTC 4 cut(s) 206, 785, 853, 1302
MscI TGGCCA 1 cut(s) 1931
MseI TTAA 4 cut(s) 416, 669, 1602, 2197
MslI CAYNNNNRTG 4 cut(s) 1178, 1212, 1441, 1800
Msp20I TGGCCA 1 cut(s) 1931
MspA1I CMGCKG 1 cut(s) 2183
MspI CCGG 4 cut(s) 239, 380, 456, 1166
MspR9I CCNGG 8 cut(s) 165, 380, 381, 594, 635, 731, 2021, 2078
Mva1269I GAATGC 2 cut(s) 1583, 1826
MvaI CCWGG 6 cut(s) 165, 594, 635, 731, 2021, 2078
MvnI CGCG 2 cut(s) 286, 366
MwoI GCNNNNNNNGC 4 cut(s) 157, 363, 606, 635
NaeI GCCGGC 1 cut(s) 240
NciI CCSGG 2 cut(s) 380, 381
NdeI CATATG 1 cut(s) 864
NgoMIV GCCGGC 1 cut(s) 238
NlaIV GGNNCC 3 cut(s) 378, 385, 1164
NmuCI GTSAC 6 cut(s) 68, 912, 1094, 1275, 1445, 1521
NsiI ATGCAT 2 cut(s) 900, 1797
NspI RCATGY 1 cut(s) 115
NspV TTCGAA 1 cut(s) 789
OliI CACNNNNGTG 1 cut(s) 1178
PagI TCATGA 2 cut(s) 469, 565
PceI AGGCCT 1 cut(s) 1983
PciSI GCTCTTC 1 cut(s) 867
PctI GAATGC 2 cut(s) 1583, 1826
PdiI GCCGGC 1 cut(s) 240
PdmI GAANNNNTTC 4 cut(s) 206, 785, 853, 1302
PfeI GAWTC 7 cut(s) 39, 88, 763, 1469, 1679, 1687, 1763
PkrI GCNGC 9 cut(s) 8, 63, 608, 1075, 1204, 1259, 2010, 2083, 2182
PleI GAGTC 7 cut(s) 95, 253, 977, 1091, 1741, 1858, 1871
PpsI GAGTC 7 cut(s) 95, 253, 977, 1091, 1741, 1858, 1871
PsiI TTATAA 1 cut(s) 813
Psp6I CCWGG 6 cut(s) 163, 592, 633, 729, 2019, 2076
PspFI CCCAGC 1 cut(s) 459
PspGI CCWGG 6 cut(s) 163, 592, 633, 729, 2019, 2076
PspN4I GGNNCC 3 cut(s) 378, 385, 1164
PspPI GGNCC 3 cut(s) 361, 376, 822
PstI CTGCAG 4 cut(s) 611, 1078, 1270, 1521
PstNI CAGNNNCTG 1 cut(s) 1246
PsuI RGATCY 2 cut(s) 411, 1941
PvuII CAGCTG 1 cut(s) 2183
RsaI GTAC 5 cut(s) 272, 299, 545, 1366, 1787
RsaNI GTAC 5 cut(s) 271, 298, 544, 1365, 1786
RseI CAYNNNNRTG 4 cut(s) 1178, 1212, 1441, 1800
SapI GCTCTTC 1 cut(s) 867
SaqAI TTAA 4 cut(s) 416, 669, 1602, 2197
SatI GCNGC 9 cut(s) 7, 62, 607, 1074, 1203, 1258, 2009, 2082, 2181
Sau96I GGNCC 3 cut(s) 361, 376, 822
ScaI AGTACT 1 cut(s) 1366
SchI GAGTC 7 cut(s) 95, 254, 977, 1091, 1742, 1858, 1871
ScrFI CCNGG 8 cut(s) 165, 380, 381, 594, 635, 731, 2021, 2078
SduI GDGCHC 1 cut(s) 386
SfaNI GCATC 6 cut(s) 565, 662, 938, 1292, 1717, 1792
SfcI CTRYAG 6 cut(s) 327, 607, 1074, 1266, 1517, 1674
SfuI TTCGAA 1 cut(s) 789
SinI GGWCC 2 cut(s) 361, 822
SmaI CCCGGG 1 cut(s) 381
SmiMI CAYNNNNRTG 4 cut(s) 1178, 1212, 1441, 1800
SpeI ACTAGT 1 cut(s) 1036
SseBI AGGCCT 1 cut(s) 1983
SsiI CCGC 7 cut(s) 284, 364, 600, 702, 1202, 1273, 2009
SspI AATATT 2 cut(s) 1012, 1816
SspMI CTAG 8 cut(s) 1037, 1088, 1289, 1376, 1466, 1683, 1691, 2070
StuI AGGCCT 1 cut(s) 1983
StyD4I CCNGG 8 cut(s) 163, 378, 379, 592, 633, 729, 2019, 2076
TaaI ACNGT 1 cut(s) 1964
TaqI TCGA 2 cut(s) 132, 789
TatI WGTACW 3 cut(s) 543, 1364, 1785
TauI GCSGC 2 cut(s) 1205, 2011
TfiI GAWTC 7 cut(s) 39, 88, 763, 1469, 1679, 1687, 1763
Tru1I TTAA 4 cut(s) 416, 669, 1602, 2197
Tru9I TTAA 4 cut(s) 416, 669, 1602, 2197
TscAI CASTG 5 cut(s) 98, 628, 682, 1275, 1939
TseFI GTSAC 6 cut(s) 68, 912, 1094, 1275, 1445, 1521
TseI GCWGC 7 cut(s) 6, 61, 606, 1073, 1257, 2081, 2180
Tsp45I GTSAC 6 cut(s) 68, 912, 1094, 1275, 1445, 1521
TspGWI ACGGA 2 cut(s) 32, 1861
TspMI CCCGGG 1 cut(s) 379
TspRI CASTG 5 cut(s) 98, 628, 682, 1275, 1939
VpaK11BI GGWCC 2 cut(s) 361, 822
XapI RAATTY 7 cut(s) 12, 646, 785, 1194, 1555, 1611, 2193
XbaI TCTAGA 3 cut(s) 1375, 1465, 1690
XceI RCATGY 1 cut(s) 115
XcmI CCANNNNNNNNNTGG 1 cut(s) 1726
XmaI CCCGGG 1 cut(s) 379
XmiI GTMKAC 5 cut(s) 923, 1041, 1875, 1907, 2139
XmnI GAANNNNTTC 4 cut(s) 206, 785, 853, 1302
XspI CTAG 8 cut(s) 1037, 1088, 1289, 1376, 1466, 1683, 1691, 2070
ZrmI AGTACT 1 cut(s) 1366
Zsp2I ATGCAT 2 cut(s) 900, 1797
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.