Rorug01G0111600
NAC Family

(NAC) domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000639
Physical Location & Seq
Reverse (-)
19869590 .. 19875293
5704 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0111600.1

Sequence Viewer

Length: 1380 bp
ATGGAGGGCTCTGTGGCGGACGATCTCGGAGCCCCGGAGTCATGGGAGGTCGCCGGTGTGGACGAGGCTATGAGCCGCCTGATGCTCTCCTCCAACAAGGACCCCAAGCCCCAGCAAGACCTCAACGACGCGTCGTCTTTGGTTTCCTCCGTTTCTGATGGAGCTGGTGGCGATAAGCTCTCTGAGGATGCCCTCAATCAGGTCGACCAGTTCCTTCGCGAGGCTTTGCAAAACCCTCGGGAGCGCCTATCAATTTTACGAATGGAGCAAGATGTTGAGAAGTTTATCCGTGATCCTATTCAGCAGCAACTGGAGTTTCAGCAGTTGCCCACTTCTTATTTACGCTTGGCTGCACACCGTGTTGCTCAGCATTATGCACTTCAGTCAATGGTTTTGTTAGATAATAACTTGCCTGATGGCTCTGGTTCCAGAATTATTGTTCGCAAAACTCCCGAGTGTCGACTTCCTTTGATTCGGCTTGCAGACATCCCTGTTAGTTTGCCGTCAGAAGAAAGTGGTGTCACTAAAGTTGCAATAAAACAGAGGCCCCAGAAACGGTCACAGATGGCCAACAGTGCAGACTCAAATTCATCAAAGGGGAACAGTTCTAAAAGTGTGGAAGAGAGGAAAGAGGAGTATAACAGGGCCCGTGCGCGAATATTTAATGCTGCTAATAATATTAGTGGCAGTACAAGTGGGAAACCAGAAAGTGAACCAAGACTGCAGGATACTTCACAACATGTTCCCTTGGTGATGTCAAAAGTGGAAGATAAATCAGATGTTTCTGATTTACATTCTAGTAGAGGTTTAATTGATTATTCAACAAGTAGCAGTAGAGCATCTTCTAGAAGTAGGACAGAGAAGGAGCCAGTGGGGAGGTACAAACCAAATAATAGGGTAGCCATATTTAGGGACCGTGAGATTGACAGGAAGGATCCGGATTATGACAGAAGTTATGACAGGTACATGCAAAGATTTGATCCTGGGTTCGGATTCAGTGGTGGACCATACACCATCCAGCCCATGTATACTCCTGCATTGAATTATAATACTGAATTCCCTCAACTTGGTTCTACCCACGGGCCTCAGATTTCTACTGAACATCAACCTCGCCCACTTCCACAACACTTACCCGGGCCATGGGTTGCACCATCCCCTGCTGGTATTGGGTATGGTCATCCAGAGACCATAATGACACCGTTTAATCCTAATCATGTTGGTGTACGGTCCACGTCTGGCATATACCTGCATTCTTCCCAGTATCCTTGTCAGCAGCCTGGAATGCCCTTTATCCATCCTCATGAACATGTTCACCAACCTTTTTCACAGTCTCATCAACAGCAGCCTGATGCAAGTTTTGGGTTAGCCCGGCCCCGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

459

Amino Acids

51.19

Weight (kDa)

6.44

Isoelectric Point (pI)

57.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
R3H PF01424 85 - 130 1.1e-07 R3H domain
SUZ PF12752 176 - 224 1.3e-14 SUZ domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000639)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020 FvH4_7g18020
rosa_chinensis RchiOBHm_Chr1g0324821 RchiOBHm_Chr1g0333801 RchiOBHm_Chr1g0361601 RchiOBHm_Chr1g0361611 RchiOBHm_Chr1g0361661
rosa_laevigata RLG00000027711 RLG00000027712 RLG00000027714 RLG00000027715 RLG00000027716 RLG00000029530 RLG00000029531 RLG00000030172
rosa_multiflora Rmu_co8302323.1_g000001 Rmu_co8459497.1_g000001 Rmu_sc0003426.1_g000013 Rmu_sc0003693.1_g000002 Rmu_sc0003693.1_g000003 Rmu_sc0003704.1_g000001 Rmu_sc0003704.1_g000002 Rmu_sc0006101.1_g000001 Rmu_sc0006101.1_g000010 Rmu_sc0006417.1_g000001 Rmu_sc0006417.1_g000002 Rmu_sc0006417.1_g000005 Rmu_sc0007217.1_g000011 Rmu_sc0010981.1_g000006 Rmu_sc0011258.1_g000006 Rmu_sc0017253.1_g000003 Rmu_sc0017253.1_g000004 Rmu_sc0017750.1_g000001 Rmu_sc0026316.1_g000001 Rmu_sc0038193.1_g000002 Rmu_sc0041549.1_g000001
rosa_roxburghii Rroxscaffold_159G00433000 Rroxscaffold_159G00433050 Rroxscaffold_159G00433080 Rroxscaffold_4G00294830 Rroxscaffold_4G00294840 Rroxscaffold_4G00294900 Rroxscaffold_4G00294910 Rroxscaffold_4G00294920 Rroxscaffold_4G00317230 Rroxscaffold_4G00325170 Rroxscaffold_4G00325200 Rroxscaffold_4G00325280
rosa_rugosa Rorug01G0048000 Rorug01G0111600 Rorug01G0111700 Rorug01G0290200 Rorug01G0290300 Rorug01G0290300 Rorug01G0290400 Rorug01G0290600
rosa_samantha Rh1AG064300 Rh1AG064500 Rh1AG134000 Rh1AG134100 Rh1AG300500 Rh1AG300600
rosa_wichuraiana Rw1G005340 Rw1G005390 Rw1G005420 Rw1G011180 Rw1G011190 Rw1G026650 Rw1G026660 Rw1G026680 Rw1G026690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1047
Acc36I ACCTGC 1 cut(s) 1254
AccI GTMKAC 3 cut(s) 204, 460, 1028
AccII CGCG 3 cut(s) 131, 219, 655
AccIII TCCGGA 1 cut(s) 937
AciI CCGC 2 cut(s) 17, 76
AclWI GGATC 4 cut(s) 287, 929, 942, 974
AcoI YGGCCR 1 cut(s) 567
AcsI RAATTY 2 cut(s) 586, 1055
AcuI CTGAAG 1 cut(s) 365
AdeI CACNNNGTG 1 cut(s) 359
AfaI GTAC 4 cut(s) 691, 881, 965, 1224
AfiI CCNNNNNNNGG 8 cut(s) 199, 220, 555, 909, 989, 1067, 1140, 1374
AflIII ACRYGT 3 cut(s) 129, 739, 1306
AgsI TTSAA 2 cut(s) 822, 1042
AhdI GACNNNNNGTC 1 cut(s) 133
AjiI CACGTC 1 cut(s) 1233
AjnI CCWGG 2 cut(s) 982, 1276
AluBI AGCT 2 cut(s) 164, 178
AluI AGCT 2 cut(s) 164, 178
Alw26I GTCTC 2 cut(s) 1178, 1335
AlwI GGATC 4 cut(s) 287, 929, 942, 974
AlwNI CAGNNNCTG 1 cut(s) 310
Ama87I CYCGRG 3 cut(s) 237, 452, 1133
Aor13HI TCCGGA 1 cut(s) 937
AoxI GGCC 6 cut(s) 545, 567, 645, 1082, 1136, 1370
ApaI GGGCCC 1 cut(s) 649
ApeKI GCWGC 5 cut(s) 304, 350, 668, 1273, 1342
ApoI RAATTY 2 cut(s) 586, 1055
Asp700I GAANNNNTTC 1 cut(s) 1308
AspLEI GCGC 2 cut(s) 246, 655
AsuC2I CCSGG 5 cut(s) 35, 1134, 1135, 1369, 1375
AsuHPI GGTGA 2 cut(s) 763, 1304
AvaI CYCGRG 3 cut(s) 237, 452, 1133
AvaII GGWCC 4 cut(s) 100, 913, 1004, 1227
BaeGI GKGCMC 1 cut(s) 649
BalI TGGCCA 1 cut(s) 569
BamHI GGATCC 1 cut(s) 934
BanII GRGCYC 3 cut(s) 11, 34, 649
BarI GAAGNNNNNNTAC 2 cut(s) 826, 858
BbvI GCAGC 5 cut(s) 316, 337, 655, 1285, 1354
BccI CCATC 6 cut(s) 152, 410, 559, 1022, 1159, 1302
BceAI ACGGC 1 cut(s) 487
BcgI CGANNNNNNTGC 2 cut(s) 218, 252
BciT130I CCWGG 2 cut(s) 984, 1278
BciVI GTATCC 2 cut(s) 721, 1272
BcnI CCSGG 5 cut(s) 35, 1134, 1135, 1369, 1375
BcoDI GTCTC 2 cut(s) 1178, 1335
BfaI CTAG 2 cut(s) 798, 846
BfmI CTRYAG 1 cut(s) 722
BfoI RGCGCY 1 cut(s) 247
BfuAI ACCTGC 1 cut(s) 1254
BfuI GTATCC 2 cut(s) 721, 1272
BisI GCNGC 6 cut(s) 76, 305, 351, 669, 1274, 1343
BlpI GCTNAGC 1 cut(s) 366
BlsI GCNGC 6 cut(s) 77, 306, 352, 670, 1275, 1344
Bme1390I CCNGG 7 cut(s) 35, 984, 1134, 1135, 1278, 1369, 1375
Bme18I GGWCC 4 cut(s) 100, 913, 1004, 1227
BmeRI GACNNNNNGTC 1 cut(s) 133
BmeT110I CYCGRG 3 cut(s) 237, 452, 1133
BmgBI CACGTC 1 cut(s) 1233
BmiI GGNNCC 9 cut(s) 31, 102, 427, 548, 647, 867, 914, 936, 1373
BmrFI CCNGG 7 cut(s) 35, 984, 1134, 1135, 1278, 1369, 1375
BmrI ACTGGG 1 cut(s) 1252
BmsI GCATC 4 cut(s) 72, 178, 848, 1339
BmuI ACTGGG 1 cut(s) 1252
BpmI CTGGAG 1 cut(s) 332
Bpu1102I GCTNAGC 1 cut(s) 366
BpuMI CCSGG 5 cut(s) 35, 1134, 1135, 1369, 1375
BsaI GGTCTC 1 cut(s) 1178
BsaJI CCNNGG 8 cut(s) 33, 236, 747, 983, 1078, 1133, 1139, 1373
BsaWI WCCGGW 1 cut(s) 937
Bsc4I CCNNNNNNNGG 8 cut(s) 199, 220, 555, 909, 989, 1067, 1140, 1374
Bse118I RCCGGY 1 cut(s) 53
Bse1I ACTGG 4 cut(s) 208, 315, 869, 1258
BseAI TCCGGA 1 cut(s) 937
BseBI CCWGG 2 cut(s) 984, 1278
BseDI CCNNGG 8 cut(s) 33, 236, 747, 983, 1078, 1133, 1139, 1373
BseGI GGATG 6 cut(s) 193, 486, 1014, 1151, 1177, 1294
BseLI CCNNNNNNNGG 8 cut(s) 199, 220, 555, 909, 989, 1067, 1140, 1374
BseMII CTCAG 3 cut(s) 174, 380, 1100
BseNI ACTGG 4 cut(s) 208, 315, 869, 1258
BseRI GAGGAG 2 cut(s) 79, 647
BseSI GKGCMC 1 cut(s) 649
BseXI GCAGC 5 cut(s) 316, 337, 655, 1285, 1354
BseYI CCCAGC 1 cut(s) 111
BsgI GTGCAG 2 cut(s) 336, 597
Bsh1236I CGCG 3 cut(s) 131, 219, 655
BshFI GGCC 6 cut(s) 547, 569, 647, 1084, 1138, 1372
BsiHKCI CYCGRG 3 cut(s) 237, 452, 1133
BsiSI CCGG 6 cut(s) 35, 54, 938, 1134, 1369, 1375
BslFI GGGAC 1 cut(s) 926
BslI CCNNNNNNNGG 8 cut(s) 199, 220, 555, 909, 989, 1067, 1140, 1374
BsmAI GTCTC 2 cut(s) 1178, 1335
BsmFI GGGAC 1 cut(s) 926
BsmI GAATGC 2 cut(s) 1249, 1287
BsnI GGCC 6 cut(s) 547, 569, 647, 1084, 1138, 1372
Bso31I GGTCTC 1 cut(s) 1178
BsoBI CYCGRG 3 cut(s) 237, 452, 1133
Bsp120I GGGCCC 1 cut(s) 645
Bsp1286I GDGCHC 3 cut(s) 11, 34, 649
Bsp13I TCCGGA 1 cut(s) 937
Bsp143I GATC 4 cut(s) 22, 292, 934, 979
Bsp1720I GCTNAGC 1 cut(s) 366
Bsp19I CCATGG 1 cut(s) 1139
Bsp68I TCGCGA 1 cut(s) 219
BspACI CCGC 2 cut(s) 17, 76
BspANI GGCC 6 cut(s) 547, 569, 647, 1084, 1138, 1372
BspCNI CTCAG 3 cut(s) 175, 379, 1099
BspEI TCCGGA 1 cut(s) 937
BspFNI CGCG 3 cut(s) 131, 219, 655
BspHI TCATGA 1 cut(s) 1300
BspLI GGNNCC 9 cut(s) 31, 102, 427, 548, 647, 867, 914, 936, 1373
BspMAI CTGCAG 1 cut(s) 726
BspMI ACCTGC 1 cut(s) 1254
BspPI GGATC 4 cut(s) 287, 929, 942, 974
BspTNI GGTCTC 1 cut(s) 1178
BsrFI RCCGGY 1 cut(s) 53
BsrI ACTGG 4 cut(s) 208, 315, 869, 1258
BssAI RCCGGY 1 cut(s) 53
BssECI CCNNGG 8 cut(s) 33, 236, 747, 983, 1078, 1133, 1139, 1373
BssMI GATC 4 cut(s) 22, 292, 934, 979
BssNAI GTATAC 1 cut(s) 1029
BssT1I CCWWGG 2 cut(s) 747, 1139
Bst1107I GTATAC 1 cut(s) 1029
Bst2UI CCWGG 2 cut(s) 984, 1278
Bst4CI ACNGT 8 cut(s) 359, 558, 575, 605, 917, 1200, 1227, 1329
Bst6I CTCTTC 1 cut(s) 615
BstC8I GCNNGC 1 cut(s) 480
BstDEI CTNAG 3 cut(s) 183, 366, 1086
BstDSI CCRYGG 2 cut(s) 1078, 1139
BstENI CCTNNNNNAGG 2 cut(s) 197, 218
BstF5I GGATG 6 cut(s) 193, 486, 1014, 1151, 1177, 1294
BstFNI CGCG 3 cut(s) 131, 219, 655
BstH2I RGCGCY 1 cut(s) 247
BstHHI GCGC 2 cut(s) 246, 655
BstKTI GATC 4 cut(s) 25, 295, 937, 982
BstMAI GTCTC 2 cut(s) 1178, 1335
BstMBI GATC 4 cut(s) 22, 292, 934, 979
BstMWI GCNNNNNNNGC 2 cut(s) 575, 1282
BstNI CCWGG 2 cut(s) 984, 1278
BstNSI RCATGY 3 cut(s) 743, 970, 1310
BstSCI CCNGG 7 cut(s) 33, 982, 1132, 1133, 1276, 1367, 1373
BstSFI CTRYAG 1 cut(s) 722
BstSLI GKGCMC 1 cut(s) 649
BstUI CGCG 3 cut(s) 131, 219, 655
BstV1I GCAGC 5 cut(s) 316, 337, 655, 1285, 1354
BstX2I RGATCY 1 cut(s) 934
BstYI RGATCY 1 cut(s) 934
BstZ17I GTATAC 1 cut(s) 1029
BsuI GTATCC 2 cut(s) 721, 1272
BsuRI GGCC 6 cut(s) 547, 569, 647, 1084, 1138, 1372
BtgI CCRYGG 2 cut(s) 1078, 1139
BtrI CACGTC 1 cut(s) 1233
BtsCI GGATG 6 cut(s) 193, 486, 1014, 1151, 1177, 1294
BtsIMutI CAGTG 3 cut(s) 580, 876, 1003
BtuMI TCGCGA 1 cut(s) 219
BveI ACCTGC 1 cut(s) 1254
Cac8I GCNNGC 1 cut(s) 480
CaiI CAGNNNCTG 1 cut(s) 310
CciI TCATGA 1 cut(s) 1300
CfoI GCGC 2 cut(s) 246, 655
Cfr10I RCCGGY 1 cut(s) 53
Cfr9I CCCGGG 1 cut(s) 1133
CseI GACGC 2 cut(s) 120, 137
Csp6I GTAC 4 cut(s) 690, 880, 964, 1223
CviAII CATG 8 cut(s) 42, 740, 967, 1024, 1140, 1214, 1301, 1307
CviQI GTAC 4 cut(s) 690, 880, 964, 1223
DdeI CTNAG 3 cut(s) 183, 366, 1086
DpnI GATC 4 cut(s) 24, 294, 936, 981
DpnII GATC 4 cut(s) 22, 292, 934, 979
DraIII CACNNNGTG 1 cut(s) 359
DriI GACNNNNNGTC 1 cut(s) 133
EaeI YGGCCR 1 cut(s) 567
Eam1104I CTCTTC 1 cut(s) 615
Eam1105I GACNNNNNGTC 1 cut(s) 133
EarI CTCTTC 1 cut(s) 615
EciI GGCGGA 1 cut(s) 32
Eco130I CCWWGG 2 cut(s) 747, 1139
Eco24I GRGCYC 3 cut(s) 11, 34, 649
Eco31I GGTCTC 1 cut(s) 1178
Eco47I GGWCC 4 cut(s) 100, 913, 1004, 1227
Eco57I CTGAAG 1 cut(s) 365
Eco88I CYCGRG 3 cut(s) 237, 452, 1133
EcoNI CCTNNNNNAGG 2 cut(s) 197, 218
EcoO109I RGGNCCY 3 cut(s) 100, 546, 645
EcoRI GAATTC 1 cut(s) 1055
EcoRII CCWGG 2 cut(s) 982, 1276
EcoT14I CCWWGG 2 cut(s) 747, 1139
EcoT38I GRGCYC 3 cut(s) 11, 34, 649
ErhI CCWWGG 2 cut(s) 747, 1139
FaeI CATG 8 cut(s) 45, 743, 970, 1027, 1143, 1217, 1304, 1310
FaqI GGGAC 1 cut(s) 926
FatI CATG 8 cut(s) 41, 739, 966, 1023, 1139, 1213, 1300, 1306
FblI GTMKAC 3 cut(s) 204, 460, 1028
Fnu4HI GCNGC 6 cut(s) 76, 305, 351, 669, 1274, 1343
FokI GGATG 6 cut(s) 200, 473, 1001, 1138, 1164, 1281
FriOI GRGCYC 3 cut(s) 11, 34, 649
Fsp4HI GCNGC 6 cut(s) 76, 305, 351, 669, 1274, 1343
FspBI CTAG 2 cut(s) 798, 846
GlaI GCGC 2 cut(s) 245, 654
GluI GCNGC 6 cut(s) 76, 305, 351, 669, 1274, 1343
GsaI CCCAGC 1 cut(s) 115
GsuI CTGGAG 1 cut(s) 332
HaeII RGCGCY 1 cut(s) 247
HaeIII GGCC 6 cut(s) 547, 569, 647, 1084, 1138, 1372
HapII CCGG 6 cut(s) 35, 54, 938, 1134, 1369, 1375
HgaI GACGC 2 cut(s) 120, 137
HhaI GCGC 2 cut(s) 246, 655
Hin1II CATG 8 cut(s) 45, 743, 970, 1027, 1143, 1217, 1304, 1310
Hin6I GCGC 2 cut(s) 244, 653
HinP1I GCGC 2 cut(s) 244, 653
HincII GTYRAC 2 cut(s) 205, 461
HindII GTYRAC 2 cut(s) 205, 461
HinfI GANTC 4 cut(s) 38, 472, 581, 993
HpaII CCGG 6 cut(s) 35, 54, 938, 1134, 1369, 1375
HphI GGTGA 2 cut(s) 763, 1304
Hpy166II GTNNAC 9 cut(s) 61, 205, 461, 713, 1004, 1029, 1223, 1230, 1312
Hpy188I TCNGA 8 cut(s) 29, 157, 184, 508, 778, 787, 992, 1089
Hpy188III TCNNGA 8 cut(s) 218, 239, 429, 452, 846, 938, 1181, 1301
Hpy8I GTNNAC 9 cut(s) 61, 205, 461, 713, 1004, 1029, 1223, 1230, 1312
Hpy99I CGWCG 2 cut(s) 131, 136
HpyAV CCTTC 3 cut(s) 224, 856, 925
HpyCH4III ACNGT 8 cut(s) 359, 558, 575, 605, 917, 1200, 1227, 1329
HpyCH4IV ACGT 1 cut(s) 1232
HpyF10VI GCNNNNNNNGC 2 cut(s) 575, 1282
HpyF3I CTNAG 3 cut(s) 183, 366, 1086
HpySE526I ACGT 1 cut(s) 1232
Hsp92II CATG 8 cut(s) 45, 743, 970, 1027, 1143, 1217, 1304, 1310
HspAI GCGC 2 cut(s) 244, 653
Kpn2I TCCGGA 1 cut(s) 937
Kzo9I GATC 4 cut(s) 22, 292, 934, 979
LmnI GCTCC 5 cut(s) 29, 161, 241, 265, 865
Lsp1109I GCAGC 5 cut(s) 316, 337, 655, 1285, 1354
LweI GCATC 4 cut(s) 72, 178, 848, 1339
MaeI CTAG 2 cut(s) 798, 846
MaeII ACGT 1 cut(s) 1232
MaeIII GTNAC 2 cut(s) 520, 558
MalI GATC 4 cut(s) 24, 294, 936, 981
MboI GATC 4 cut(s) 22, 292, 934, 979
MboII GAAGA 5 cut(s) 521, 632, 779, 834, 1245
MflI RGATCY 1 cut(s) 934
MhlI GDGCHC 3 cut(s) 11, 34, 649
MlsI TGGCCA 1 cut(s) 569
MluCI AATT 6 cut(s) 252, 432, 586, 810, 1042, 1055
MluI ACGCGT 1 cut(s) 129
MluNI TGGCCA 1 cut(s) 569
MlyI GAGTC 2 cut(s) 47, 575
MmeI TCCRAC 1 cut(s) 117
Mox20I TGGCCA 1 cut(s) 569
MroI TCCGGA 1 cut(s) 937
MroXI GAANNNNTTC 1 cut(s) 1308
MscI TGGCCA 1 cut(s) 569
MseI TTAA 3 cut(s) 663, 809, 1203
MslI CAYNNNNRTG 3 cut(s) 1218, 1299, 1305
Msp20I TGGCCA 1 cut(s) 569
MspI CCGG 6 cut(s) 35, 54, 938, 1134, 1369, 1375
MspR9I CCNGG 7 cut(s) 35, 984, 1134, 1135, 1278, 1369, 1375
Mva1269I GAATGC 2 cut(s) 1249, 1287
MvaI CCWGG 2 cut(s) 984, 1278
MvnI CGCG 3 cut(s) 131, 219, 655
MwoI GCNNNNNNNGC 2 cut(s) 575, 1282
NciI CCSGG 5 cut(s) 35, 1134, 1135, 1369, 1375
NcoI CCATGG 1 cut(s) 1139
NdeII GATC 4 cut(s) 22, 292, 934, 979
NlaIII CATG 8 cut(s) 45, 743, 970, 1027, 1143, 1217, 1304, 1310
NlaIV GGNNCC 9 cut(s) 31, 102, 427, 548, 647, 867, 914, 936, 1373
NmuCI GTSAC 2 cut(s) 520, 558
NruI TCGCGA 1 cut(s) 219
NspI RCATGY 3 cut(s) 743, 970, 1310
PagI TCATGA 1 cut(s) 1300
PciI ACATGT 2 cut(s) 739, 1306
PctI GAATGC 2 cut(s) 1249, 1287
PdmI GAANNNNTTC 1 cut(s) 1308
PfeI GAWTC 2 cut(s) 472, 993
PkrI GCNGC 6 cut(s) 77, 306, 352, 670, 1275, 1344
PleI GAGTC 2 cut(s) 46, 575
PpsI GAGTC 2 cut(s) 46, 575
PpuMI RGGWCCY 1 cut(s) 100
PscI ACATGT 2 cut(s) 739, 1306
PsiI TTATAA 1 cut(s) 1047
Psp5II RGGWCCY 1 cut(s) 100
Psp6I CCWGG 2 cut(s) 982, 1276
PspFI CCCAGC 1 cut(s) 111
PspGI CCWGG 2 cut(s) 982, 1276
PspN4I GGNNCC 9 cut(s) 31, 102, 427, 548, 647, 867, 914, 936, 1373
PspOMI GGGCCC 1 cut(s) 645
PspPPI RGGWCCY 1 cut(s) 100
PstI CTGCAG 1 cut(s) 726
PstNI CAGNNNCTG 1 cut(s) 310
PsuI RGATCY 1 cut(s) 934
RruI TCGCGA 1 cut(s) 219
RsaI GTAC 4 cut(s) 691, 881, 965, 1224
RsaNI GTAC 4 cut(s) 690, 880, 964, 1223
RseI CAYNNNNRTG 3 cut(s) 1218, 1299, 1305
SalI GTCGAC 2 cut(s) 203, 459
SaqAI TTAA 3 cut(s) 663, 809, 1203
SatI GCNGC 6 cut(s) 76, 305, 351, 669, 1274, 1343
Sau3AI GATC 4 cut(s) 22, 292, 934, 979
SchI GAGTC 2 cut(s) 47, 575
ScrFI CCNGG 7 cut(s) 35, 984, 1134, 1135, 1278, 1369, 1375
SduI GDGCHC 3 cut(s) 11, 34, 649
SfaNI GCATC 4 cut(s) 72, 178, 848, 1339
SfcI CTRYAG 1 cut(s) 722
SgrAI CRCCGGYG 1 cut(s) 53
SinI GGWCC 4 cut(s) 100, 913, 1004, 1227
SmaI CCCGGG 1 cut(s) 1135
SmiMI CAYNNNNRTG 3 cut(s) 1218, 1299, 1305
Sse9I AATT 6 cut(s) 252, 432, 586, 810, 1042, 1055
SsiI CCGC 2 cut(s) 17, 76
SspI AATATT 2 cut(s) 660, 679
SspMI CTAG 2 cut(s) 798, 846
StyD4I CCNGG 7 cut(s) 33, 982, 1132, 1133, 1276, 1367, 1373
StyI CCWWGG 2 cut(s) 747, 1139
TaaI ACNGT 8 cut(s) 359, 558, 575, 605, 917, 1200, 1227, 1329
TaiI ACGT 1 cut(s) 1235
TaqI TCGA 2 cut(s) 204, 460
TasI AATT 6 cut(s) 252, 432, 586, 810, 1042, 1055
TatI WGTACW 1 cut(s) 689
TauI GCSGC 1 cut(s) 78
TfiI GAWTC 2 cut(s) 472, 993
Tru1I TTAA 3 cut(s) 663, 809, 1203
Tru9I TTAA 3 cut(s) 663, 809, 1203
TscAI CASTG 3 cut(s) 580, 876, 1003
TseFI GTSAC 2 cut(s) 520, 558
TseI GCWGC 5 cut(s) 304, 350, 668, 1273, 1342
Tsp45I GTSAC 2 cut(s) 520, 558
TspDTI ATGAA 2 cut(s) 579, 1317
TspGWI ACGGA 2 cut(s) 139, 278
TspMI CCCGGG 1 cut(s) 1133
TspRI CASTG 3 cut(s) 580, 876, 1003
VpaK11BI GGWCC 4 cut(s) 100, 913, 1004, 1227
XagI CCTNNNNNAGG 2 cut(s) 197, 218
XapI RAATTY 2 cut(s) 586, 1055
XbaI TCTAGA 1 cut(s) 845
XceI RCATGY 3 cut(s) 743, 970, 1310
XmaI CCCGGG 1 cut(s) 1133
XmiI GTMKAC 3 cut(s) 204, 460, 1028
XmnI GAANNNNTTC 1 cut(s) 1308
XspI CTAG 2 cut(s) 798, 846
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.