Rorug05G0410900

LysM domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000334
Physical Location & Seq
Forward (+)
56755980 .. 56763877
7898 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0410900.1

Sequence Viewer

Length: 1266 bp
ATGGTATATGACGAGATTGTGGCTGTTGAGAGGCGGAACAAGGATTGGAGCAGGGTTCACTATGAGCAAGAGGTCAGAAACAATCCTCTGAATTACGACTCCTGGCTCGCTTACATAGGGCTAGAAGAGAGTGCTGCTGCGAATAAGCACCGAATCAGAGAGCTGTTCCGGCGAGCTACAGCTAACGTTCCTCCGGTGCCGGAGTTGTACCGGGACGGGAAGCTTCGGTGGCGGCGCTATGTTGATTTGTGGATGTGTTATGCAACTTATGAGGAGGGTTCCGGAGGAGGAGACGTGAGACAAGTTTATGAGCAGTGCCTTGCGGTGATTCCTCATGACAAGTTCTCATTTGCGAAGGTTTGGCTTCTTGCAGCGGGTTTGGAGTTACGACAGGGGAATCTCAAGGGTGCGCGGAAGATCCTGGCCACTGCCATAAGAAGGGCACCAAAACCGAAGATATTTAGGAAGTGCATTGAGATGGAGATGAAGCTTGGGAATTTGAATCTGTGTCGGAAACTGTACGAGAAGTATGTGTGTTGGAAACCACAGAACTGGGATGGTTGGGTGAAGTACGCAGAGTTTGAGAGAGCATTGGGGGAGACAGAACGAGTGAGGGCCCTTTTCGAATTAGGTATCAAGCAGCCGGAAATCGACCTTCTTGAGCGGTTGTGGTGGGCGTACATTGAGTTTGAAATATCCGAGGGGGAGTTTGAGAGAACCAGACAACTTTACGAGAGACTACTAGACTGCTCAAAGCATGTCCGGGTCTGGATCAGTTATGCAAGGTTTGAGGCACAAGAGAACCATTCTATTGAACATGCTAGAATGGTTTTCAGTAGAGCTGCTGGCTATTTAAAAGCTTGGGGTCGAAGTGAGGAGGAGAGGAATATGTTGCGACAAGTATGGTTGGATATGGAGGCTAGCTTTGGCGATCTGGGCGATTTGTGGTTGATGAGCTGTGTTGGAGTAGAGAGATTAGAAGGAGATGACAGTTGGCAGAGGAGATCAGATATCTTTACCTTCAATATAATGGTGCACGCTTGTGCTAAGAGATGGAACTTTTCAGAGTTGGATCTTATATTGCTTTTGTTGGCAAAGGAAGGAGTGGCATTTGAGGTCAAGACATATCAAGCTGTCTTAAAGAAATTCGCTGTCACAGAAATTTCTCAGGTGCAAAGTCTCAAGGCACCAAGCAGCTTTGACTTATGGAGTGCAGGATGTGCTCATCTCTCCATAGATTCATTCAGCACATTTAATATTTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LysM

Protein Analysis

421

Amino Acids

49.52

Weight (kDa)

7.56

Isoelectric Point (pI)

56.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HAT_Syf1_CNRKL1_N PF23233 19 - 182 3e-09 Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat
HAT_Syf1_CNRKL1_C PF23231 77 - 243 5.9e-12 Pre-mRNA-splicing factor Syf1/CRNKL1 C-terminal HAT repeat
HAT_PRP39_N PF23240 154 - 251 3.6e-11 PRP39 N-terminal HAT repeat
HAT_Syf1_CNRKL1_N PF23233 203 - 281 2.2e-06 Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat
HAT_PRP39_C PF23241 223 - 284 3.8e-11 PRP39 C-terminal HAT repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000334)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G28240
fragaria_vesca FvH4_3g03881 FvH4_3g03882 FvH4_3g39481 FvH4_3g39491 FvH4_4g25661 FvH4_5g02870 FvH4_5g34303 FvH4_5g34304 FvH4_6g24132 FvH4_6g44490 FvH4_6g44501 FvH4_6g44545 FvH4_6g44841
malus_domestica MD09G1090300.v1.1 MD09G1096600.v1.1 MD17G1084800.v1.1 MD17G1084900.v1.1
prunus_persica Prupe.1G064500_v2.0.a1 Prupe.3G230300_v2.0.a1 Prupe.3G230400_v2.0.a1 Prupe.3G230500_v2.0.a1 Prupe.3G230600_v2.0.a1 Prupe.3G230700_v2.0.a1 Prupe.3G230900_v2.0.a1 Prupe.4G037900_v2.0.a1
pyrus_communis pycom09g02100 pycom17g08220
rosa_chinensis RchiOBHm_Chr2g0161551 RchiOBHm_Chr2g0161661 RchiOBHm_Chr2g0161721 RchiOBHm_Chr2g0161751 RchiOBHm_Chr5g0006151 RchiOBHm_Chr5g0006161 RchiOBHm_Chr5g0071201 RchiOBHm_Chr7g0234891
rosa_laevigata RLG00000003965 RLG00000021291 RLG00000021295 RLG00000023183 RLG00000031379 RLG00000032398 RLG00000036195
rosa_multiflora Rmu_sc0000039.1_g000008 Rmu_sc0000637.1_g000006 Rmu_sc0007000.1_g000002 Rmu_sc0009339.1_g000009 Rmu_sc0027757.1_g000001 Rmu_sc0042097.1_g000001
rosa_roxburghii Rroxscaffold_1G00009880 Rroxscaffold_1G00069840 Rroxscaffold_1G00069850 Rroxscaffold_2G00088370 Rroxscaffold_2G00088630 Rroxscaffold_2G00088650 Rroxscaffold_2G00088660 Rroxscaffold_2G00088670 Rroxscaffold_2G00088680 Rroxscaffold_2G00088710 Rroxscaffold_3G00226660 Rroxscaffold_3G00226670 Rroxscaffold_3G00258720
rosa_rugosa Rorug02G0490500 Rorug02G0490600 Rorug02G0491600 Rorug02G0491800 Rorug02G0491800 Rorug02G0494100 Rorug05G0410900 Rorug07G0037000 Rorug07G0286000
rosa_samantha Rh2AG157300 Rh2AG556800 Rh2AG557500 Rh2AG557800 Rh2AG560100 Rh2BG163600 Rh2BG391200 Rh2BG570100 Rh2BG570600 Rh2BG571000 Rh2BG571100 Rh2BG571400 Rh2CG540600 Rh2CG541100 Rh2CG541400 Rh2CG541500 Rh2CG543700 Rh2DG162500 Rh2DG580000 Rh2DG580200 Rh2DG580300 Rh5AG047700 Rh5AG047800 Rh5BG046400 Rh5BG485500 Rh5CG055100 Rh5CG055200 Rh5CG510000 Rh5DG046200 Rh5DG496700 Rh7AG440700 Rh7AG468400 Rh7BG164100 Rh7BG413500 Rh7BG413600 Rh7CG170200 Rh7CG462400 Rh7CG462500 Rh7DG331400 Rh7DG430400
rosa_wichuraiana Rw2G046080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 196, 442, 1186
AccBSI CCGCTC 1 cut(s) 664
AccII CGCG 1 cut(s) 412
AccIII TCCGGA 1 cut(s) 281
AciI CCGC 6 cut(s) 34, 232, 323, 374, 412, 664
AclI AACGTT 1 cut(s) 186
AclWI GGATC 3 cut(s) 412, 779, 1080
AcoI YGGCCR 1 cut(s) 423
AcsI RAATTY 3 cut(s) 496, 1145, 1161
AfaI GTAC 4 cut(s) 209, 521, 572, 680
AfiI CCNNNNNNNGG 1 cut(s) 438
AgsI TTSAA 4 cut(s) 502, 692, 815, 1024
AjiI CACGTC 1 cut(s) 295
AjnI CCWGG 2 cut(s) 101, 420
AleI CACNNNNGTG 1 cut(s) 1041
Alw21I GWGCWC 2 cut(s) 1038, 1225
Alw26I GTCTC 5 cut(s) 285, 292, 593, 730, 1184
Alw44I GTGCAC 1 cut(s) 1034
AlwI GGATC 3 cut(s) 412, 779, 1080
Aor13HI TCCGGA 1 cut(s) 281
AoxI GGCC 2 cut(s) 423, 615
ApaI GGGCCC 1 cut(s) 619
ApaLI GTGCAC 1 cut(s) 1034
ApeKI GCWGC 6 cut(s) 134, 137, 371, 640, 842, 1194
ApoI RAATTY 3 cut(s) 496, 1145, 1161
AspLEI GCGC 2 cut(s) 237, 412
AspS9I GGNCC 2 cut(s) 615, 616
AsuC2I CCSGG 2 cut(s) 212, 764
AsuHPI GGTGA 2 cut(s) 337, 577
AsuII TTCGAA 1 cut(s) 624
AsuNHI GCTAGC 1 cut(s) 920
BaeGI GKGCMC 3 cut(s) 445, 619, 1038
BalI TGGCCA 1 cut(s) 425
BanI GGYRCC 3 cut(s) 196, 442, 1186
BanII GRGCYC 1 cut(s) 619
Bbv12I GWGCWC 2 cut(s) 1038, 1225
BbvI GCAGC 6 cut(s) 121, 124, 383, 652, 829, 1206
BccI CCATC 3 cut(s) 472, 551, 1047
BciT130I CCWGG 2 cut(s) 103, 422
BcnI CCSGG 2 cut(s) 212, 764
BcoDI GTCTC 5 cut(s) 285, 292, 593, 730, 1184
BfaI CTAG 4 cut(s) 122, 743, 822, 921
BfmI CTRYAG 1 cut(s) 177
BfoI RGCGCY 1 cut(s) 238
BisI GCNGC 7 cut(s) 135, 138, 233, 372, 641, 843, 1195
BlsI GCNGC 7 cut(s) 136, 139, 234, 373, 642, 844, 1196
Bme1390I CCNGG 4 cut(s) 103, 212, 422, 764
BmgBI CACGTC 1 cut(s) 295
BmgT120I GGNCC 2 cut(s) 615, 616
BmiI GGNNCC 5 cut(s) 198, 280, 444, 617, 1188
BmrFI CCNGG 4 cut(s) 103, 212, 422, 764
BmrI ACTGGG 1 cut(s) 562
BmtI GCTAGC 1 cut(s) 924
BmuI ACTGGG 1 cut(s) 562
Bpu14I TTCGAA 1 cut(s) 624
BpuEI CTTGAG 3 cut(s) 386, 680, 1166
BpuMI CCSGG 2 cut(s) 212, 764
BsaJI CCNNGG 1 cut(s) 699
BsaWI WCCGGW 2 cut(s) 193, 281
BsaXI ACNNNNNCTCC 2 cut(s) 279, 309
Bsc4I CCNNNNNNNGG 1 cut(s) 438
Bse1I ACTGG 1 cut(s) 557
BseAI TCCGGA 1 cut(s) 281
BseBI CCWGG 2 cut(s) 103, 422
BseDI CCNNGG 1 cut(s) 699
BseGI GGATG 3 cut(s) 258, 562, 1223
BseLI CCNNNNNNNGG 1 cut(s) 438
BseMII CTCAG 1 cut(s) 1181
BseNI ACTGG 1 cut(s) 557
BseRI GAGGAG 6 cut(s) 287, 300, 303, 890, 893, 1015
BseSI GKGCMC 3 cut(s) 445, 619, 1038
BseXI GCAGC 6 cut(s) 121, 124, 383, 652, 829, 1206
BsgI GTGCAG 1 cut(s) 1233
Bsh1236I CGCG 1 cut(s) 412
BshFI GGCC 2 cut(s) 425, 617
BshNI GGYRCC 3 cut(s) 196, 442, 1186
BsiHKAI GWGCWC 2 cut(s) 1038, 1225
BsiSI CCGG 7 cut(s) 169, 194, 200, 211, 282, 644, 763
BslFI GGGAC 1 cut(s) 227
BslI CCNNNNNNNGG 1 cut(s) 438
BsmAI GTCTC 5 cut(s) 285, 292, 593, 730, 1184
BsmBI CGTCTC 1 cut(s) 285
BsmFI GGGAC 1 cut(s) 227
BsnI GGCC 2 cut(s) 425, 617
Bsp119I TTCGAA 1 cut(s) 624
Bsp120I GGGCCC 1 cut(s) 615
Bsp1286I GDGCHC 4 cut(s) 445, 619, 1038, 1225
Bsp13I TCCGGA 1 cut(s) 281
Bsp143I GATC 5 cut(s) 417, 771, 931, 1004, 1072
BspACI CCGC 6 cut(s) 34, 232, 323, 374, 412, 664
BspANI GGCC 2 cut(s) 425, 617
BspCNI CTCAG 1 cut(s) 1180
BspEI TCCGGA 1 cut(s) 281
BspFNI CGCG 1 cut(s) 412
BspHI TCATGA 1 cut(s) 334
BspLI GGNNCC 5 cut(s) 198, 280, 444, 617, 1188
BspOI GCTAGC 1 cut(s) 924
BspPI GGATC 3 cut(s) 412, 779, 1080
BspT104I TTCGAA 1 cut(s) 624
BspT107I GGYRCC 3 cut(s) 196, 442, 1186
BsrBI CCGCTC 1 cut(s) 664
BsrI ACTGG 1 cut(s) 557
BssECI CCNNGG 1 cut(s) 699
BssMI GATC 5 cut(s) 417, 771, 931, 1004, 1072
Bst2UI CCWGG 2 cut(s) 103, 422
Bst4CI ACNGT 2 cut(s) 519, 992
Bst6I CTCTTC 1 cut(s) 120
BstAPI GCANNNNNTGC 1 cut(s) 1220
BstBI TTCGAA 1 cut(s) 624
BstC8I GCNNGC 5 cut(s) 108, 174, 847, 922, 1038
BstDEI CTNAG 2 cut(s) 1047, 1167
BstF5I GGATG 3 cut(s) 258, 562, 1223
BstFNI CGCG 1 cut(s) 412
BstH2I RGCGCY 1 cut(s) 238
BstHHI GCGC 2 cut(s) 237, 412
BstKTI GATC 5 cut(s) 420, 774, 934, 1007, 1075
BstMAI GTCTC 5 cut(s) 285, 292, 593, 730, 1184
BstMBI GATC 5 cut(s) 417, 771, 931, 1004, 1072
BstMWI GCNNNNNNNGC 4 cut(s) 169, 229, 936, 1220
BstNI CCWGG 2 cut(s) 103, 422
BstNSI RCATGY 2 cut(s) 761, 821
BstSCI CCNGG 4 cut(s) 101, 210, 420, 762
BstSFI CTRYAG 1 cut(s) 177
BstSLI GKGCMC 3 cut(s) 445, 619, 1038
BstUI CGCG 1 cut(s) 412
BstV1I GCAGC 6 cut(s) 121, 124, 383, 652, 829, 1206
BstX2I RGATCY 2 cut(s) 417, 1072
BstXI CCANNNNNNTGG 1 cut(s) 552
BstYI RGATCY 2 cut(s) 417, 1072
BsuRI GGCC 2 cut(s) 425, 617
BtrI CACGTC 1 cut(s) 295
BtsCI GGATG 3 cut(s) 258, 562, 1223
BtsI GCAGTG 2 cut(s) 320, 426
BtsIMutI CAGTG 2 cut(s) 320, 426
Cac8I GCNNGC 5 cut(s) 108, 174, 847, 922, 1038
CciI TCATGA 1 cut(s) 334
CfoI GCGC 2 cut(s) 237, 412
Cfr13I GGNCC 2 cut(s) 615, 616
Csp6I GTAC 4 cut(s) 208, 520, 571, 679
CviAII CATG 3 cut(s) 335, 758, 818
CviQI GTAC 4 cut(s) 208, 520, 571, 679
DdeI CTNAG 2 cut(s) 1047, 1167
DpnI GATC 5 cut(s) 419, 773, 933, 1006, 1074
DpnII GATC 5 cut(s) 417, 771, 931, 1004, 1072
DraI TTTAAA 1 cut(s) 855
EaeI YGGCCR 1 cut(s) 423
Eam1104I CTCTTC 1 cut(s) 120
EarI CTCTTC 1 cut(s) 120
EciI GGCGGA 1 cut(s) 49
Eco24I GRGCYC 1 cut(s) 619
Eco32I GATATC 1 cut(s) 1012
EcoO109I RGGNCCY 2 cut(s) 615, 616
EcoRII CCWGG 2 cut(s) 101, 420
EcoRV GATATC 1 cut(s) 1012
EcoT38I GRGCYC 1 cut(s) 619
Esp3I CGTCTC 1 cut(s) 285
FaeI CATG 3 cut(s) 338, 761, 821
FaqI GGGAC 1 cut(s) 227
FatI CATG 3 cut(s) 334, 757, 817
FauI CCCGC 1 cut(s) 367
Fnu4HI GCNGC 7 cut(s) 135, 138, 233, 372, 641, 843, 1195
FokI GGATG 3 cut(s) 265, 569, 1230
FriOI GRGCYC 1 cut(s) 619
Fsp4HI GCNGC 7 cut(s) 135, 138, 233, 372, 641, 843, 1195
FspBI CTAG 4 cut(s) 122, 743, 822, 921
GlaI GCGC 2 cut(s) 236, 411
GluI GCNGC 7 cut(s) 135, 138, 233, 372, 641, 843, 1195
HaeII RGCGCY 1 cut(s) 238
HaeIII GGCC 2 cut(s) 425, 617
HapII CCGG 7 cut(s) 169, 194, 200, 211, 282, 644, 763
HhaI GCGC 2 cut(s) 237, 412
Hin1II CATG 3 cut(s) 338, 761, 821
Hin6I GCGC 2 cut(s) 235, 410
HinP1I GCGC 2 cut(s) 235, 410
HindIII AAGCTT 3 cut(s) 221, 488, 858
HinfI GANTC 6 cut(s) 98, 153, 328, 397, 502, 1238
HpaII CCGG 7 cut(s) 169, 194, 200, 211, 282, 644, 763
HphI GGTGA 2 cut(s) 337, 577
Hpy166II GTNNAC 2 cut(s) 58, 1036
Hpy188I TCNGA 7 cut(s) 77, 90, 158, 513, 700, 1009, 1066
Hpy188III TCNNGA 5 cut(s) 282, 335, 659, 769, 1120
Hpy8I GTNNAC 2 cut(s) 58, 1036
HpyAV CCTTC 6 cut(s) 349, 432, 665, 974, 1030, 1094
HpyCH4III ACNGT 2 cut(s) 519, 992
HpyCH4IV ACGT 2 cut(s) 186, 294
HpyCH4V TGCA 7 cut(s) 263, 371, 471, 782, 1036, 1174, 1214
HpyF10VI GCNNNNNNNGC 4 cut(s) 169, 229, 936, 1220
HpyF3I CTNAG 2 cut(s) 1047, 1167
HpySE526I ACGT 2 cut(s) 186, 294
Hsp92II CATG 3 cut(s) 338, 761, 821
HspAI GCGC 2 cut(s) 235, 410
Kpn2I TCCGGA 1 cut(s) 281
Kzo9I GATC 5 cut(s) 417, 771, 931, 1004, 1072
LmnI GCTCC 1 cut(s) 48
Lsp1109I GCAGC 6 cut(s) 121, 124, 383, 652, 829, 1206
MaeI CTAG 4 cut(s) 122, 743, 822, 921
MaeII ACGT 2 cut(s) 186, 294
MaeIII GTNAC 2 cut(s) 384, 1153
MalI GATC 5 cut(s) 419, 773, 933, 1006, 1074
MbiI CCGCTC 1 cut(s) 664
MboI GATC 5 cut(s) 417, 771, 931, 1004, 1072
MboII GAAGA 3 cut(s) 137, 427, 466
MflI RGATCY 2 cut(s) 417, 1072
MhlI GDGCHC 4 cut(s) 445, 619, 1038, 1225
MlsI TGGCCA 1 cut(s) 425
MluCI AATT 5 cut(s) 91, 496, 626, 1145, 1161
MluNI TGGCCA 1 cut(s) 425
MlyI GAGTC 1 cut(s) 92
MmeI TCCRAC 5 cut(s) 491, 518, 888, 943, 1050
Mox20I TGGCCA 1 cut(s) 425
MroI TCCGGA 1 cut(s) 281
MscI TGGCCA 1 cut(s) 425
MseI TTAA 3 cut(s) 854, 1139, 1254
MslI CAYNNNNRTG 2 cut(s) 476, 1041
Msp20I TGGCCA 1 cut(s) 425
MspA1I CMGCKG 1 cut(s) 374
MspI CCGG 7 cut(s) 169, 194, 200, 211, 282, 644, 763
MspR9I CCNGG 4 cut(s) 103, 212, 422, 764
MvaI CCWGG 2 cut(s) 103, 422
MvnI CGCG 1 cut(s) 412
MwoI GCNNNNNNNGC 4 cut(s) 169, 229, 936, 1220
NciI CCSGG 2 cut(s) 212, 764
NdeII GATC 5 cut(s) 417, 771, 931, 1004, 1072
NheI GCTAGC 1 cut(s) 920
NlaIII CATG 3 cut(s) 338, 761, 821
NlaIV GGNNCC 5 cut(s) 198, 280, 444, 617, 1188
NmuCI GTSAC 1 cut(s) 1153
NspI RCATGY 2 cut(s) 761, 821
NspV TTCGAA 1 cut(s) 624
OliI CACNNNNGTG 1 cut(s) 1041
PagI TCATGA 1 cut(s) 334
PfeI GAWTC 5 cut(s) 153, 328, 397, 502, 1238
PkrI GCNGC 7 cut(s) 136, 139, 234, 373, 642, 844, 1196
PleI GAGTC 1 cut(s) 92
PpsI GAGTC 1 cut(s) 92
Psp1406I AACGTT 1 cut(s) 186
Psp6I CCWGG 2 cut(s) 101, 420
PspGI CCWGG 2 cut(s) 101, 420
PspN4I GGNNCC 5 cut(s) 198, 280, 444, 617, 1188
PspOMI GGGCCC 1 cut(s) 615
PspPI GGNCC 2 cut(s) 615, 616
PsuI RGATCY 2 cut(s) 417, 1072
RsaI GTAC 4 cut(s) 209, 521, 572, 680
RsaNI GTAC 4 cut(s) 208, 520, 571, 679
RseI CAYNNNNRTG 2 cut(s) 476, 1041
SaqAI TTAA 3 cut(s) 854, 1139, 1254
SatI GCNGC 7 cut(s) 135, 138, 233, 372, 641, 843, 1195
Sau3AI GATC 5 cut(s) 417, 771, 931, 1004, 1072
Sau96I GGNCC 2 cut(s) 615, 616
SchI GAGTC 1 cut(s) 92
ScrFI CCNGG 4 cut(s) 103, 212, 422, 764
SduI GDGCHC 4 cut(s) 445, 619, 1038, 1225
SfcI CTRYAG 1 cut(s) 177
SfuI TTCGAA 1 cut(s) 624
SmiMI CAYNNNNRTG 2 cut(s) 476, 1041
SmlI CTYRAG 3 cut(s) 401, 659, 1181
SmoI CTYRAG 3 cut(s) 401, 659, 1181
Sse9I AATT 5 cut(s) 91, 496, 626, 1145, 1161
SsiI CCGC 6 cut(s) 34, 232, 323, 374, 412, 664
SspI AATATT 1 cut(s) 1258
SspMI CTAG 4 cut(s) 122, 743, 822, 921
StyD4I CCNGG 4 cut(s) 101, 210, 420, 762
TaaI ACNGT 2 cut(s) 519, 992
TaiI ACGT 2 cut(s) 189, 297
TaqI TCGA 3 cut(s) 624, 651, 868
TasI AATT 5 cut(s) 91, 496, 626, 1145, 1161
TauI GCSGC 1 cut(s) 235
TfiI GAWTC 5 cut(s) 153, 328, 397, 502, 1238
Tru1I TTAA 3 cut(s) 854, 1139, 1254
Tru9I TTAA 3 cut(s) 854, 1139, 1254
TscAI CASTG 2 cut(s) 320, 433
TseFI GTSAC 1 cut(s) 1153
TseI GCWGC 6 cut(s) 134, 137, 371, 640, 842, 1194
Tsp45I GTSAC 1 cut(s) 1153
TspDTI ATGAA 2 cut(s) 500, 1230
TspRI CASTG 2 cut(s) 320, 433
VneI GTGCAC 1 cut(s) 1034
XapI RAATTY 3 cut(s) 496, 1145, 1161
XceI RCATGY 2 cut(s) 761, 821
XspI CTAG 4 cut(s) 122, 743, 822, 921
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.