F-box domain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| F-box-like | PF12937 | 6 - 42 | 7.5e-06 | F-box-like |
| Beta-prop_KIB1-4 | PF03478 | 128 - 267 | 4.5e-08 | KIB1-4 beta-propeller |
| b-prop_At3g26010-like | PF24750 | 130 - 333 | 8.6e-12 | F-box protein At3g26010-like, beta-propeller |
| FBA_1 | PF07734 | 135 - 312 | 2.5e-07 | F-box associated beta propeller domain |
| Beta-prop_AT5G49610-like | PF23635 | 136 - 330 | 3.2e-06 | F-box protein AT5G49610-like, beta-propeller |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1149 |
| Acc36I | ACCTGC | 1 cut(s) | 267 |
| AccB1I | GGYRCC | 4 cut(s) | 67, 96, 362, 1399 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 93 |
| AccI | GTMKAC | 2 cut(s) | 43, 195 |
| AccII | CGCG | 1 cut(s) | 1274 |
| AciI | CCGC | 4 cut(s) | 166, 171, 279, 1572 |
| AcsI | RAATTY | 2 cut(s) | 1185, 1485 |
| AcuI | CTGAAG | 3 cut(s) | 559, 1050, 1274 |
| AcyI | GRCGYC | 1 cut(s) | 1146 |
| AdeI | CACNNNGTG | 1 cut(s) | 1409 |
| AfaI | GTAC | 6 cut(s) | 395, 1113, 1203, 1440, 1568, 1631 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 93, 151, 152, 762, 824, 1373 |
| AflIII | ACRYGT | 1 cut(s) | 1452 |
| AgsI | TTSAA | 6 cut(s) | 697, 812, 1132, 1238, 1508, 1637 |
| AjnI | CCWGG | 5 cut(s) | 86, 676, 761, 1405, 1416 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 636, 668 |
| Alw26I | GTCTC | 3 cut(s) | 327, 881, 1153 |
| Ama87I | CYCGRG | 1 cut(s) | 1517 |
| ApeKI | GCWGC | 5 cut(s) | 536, 664, 797, 1672, 1675 |
| ApoI | RAATTY | 2 cut(s) | 1185, 1485 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 636, 668 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 963 |
| AspLEI | GCGC | 2 cut(s) | 139, 1179 |
| AspS9I | GGNCC | 2 cut(s) | 1600, 1704 |
| AsuC2I | CCSGG | 2 cut(s) | 360, 734 |
| AsuHPI | GGTGA | 3 cut(s) | 42, 1238, 1421 |
| AsuII | TTCGAA | 1 cut(s) | 908 |
| AvaI | CYCGRG | 1 cut(s) | 1517 |
| AvaII | GGWCC | 2 cut(s) | 1600, 1704 |
| BanI | GGYRCC | 4 cut(s) | 67, 96, 362, 1399 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1261, 1293 |
| BbsI | GAAGAC | 1 cut(s) | 1269 |
| BbvI | GCAGC | 5 cut(s) | 523, 651, 809, 1659, 1687 |
| BccI | CCATC | 5 cut(s) | 473, 1217, 1342, 1484, 1589 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 251, 285 |
| BciT130I | CCWGG | 5 cut(s) | 88, 678, 763, 1407, 1418 |
| BciVI | GTATCC | 1 cut(s) | 992 |
| BcnI | CCSGG | 2 cut(s) | 360, 734 |
| BcoDI | GTCTC | 3 cut(s) | 327, 881, 1153 |
| BfaI | CTAG | 1 cut(s) | 824 |
| BfmI | CTRYAG | 2 cut(s) | 1287, 1673 |
| BfuAI | ACCTGC | 1 cut(s) | 267 |
| BfuI | GTATCC | 1 cut(s) | 992 |
| BglII | AGATCT | 1 cut(s) | 1069 |
| BisI | GCNGC | 5 cut(s) | 537, 665, 798, 1673, 1676 |
| BlsI | GCNGC | 5 cut(s) | 538, 666, 799, 1674, 1677 |
| BmcAI | AGTACT | 1 cut(s) | 1568 |
| Bme1390I | CCNGG | 7 cut(s) | 88, 360, 678, 734, 763, 1407, 1418 |
| Bme18I | GGWCC | 2 cut(s) | 1600, 1704 |
| BmeT110I | CYCGRG | 1 cut(s) | 1517 |
| BmgT120I | GGNCC | 2 cut(s) | 1600, 1704 |
| BmrFI | CCNGG | 7 cut(s) | 88, 360, 678, 734, 763, 1407, 1418 |
| BmsI | GCATC | 3 cut(s) | 217, 1348, 1550 |
| BpiI | GAAGAC | 1 cut(s) | 1269 |
| BpmI | CTGGAG | 1 cut(s) | 1343 |
| Bpu14I | TTCGAA | 1 cut(s) | 908 |
| BpuMI | CCSGG | 2 cut(s) | 360, 734 |
| BsaHI | GRCGYC | 1 cut(s) | 1146 |
| BsaJI | CCNNGG | 7 cut(s) | 246, 676, 733, 846, 1038, 1417, 1659 |
| BsaWI | WCCGGW | 3 cut(s) | 52, 839, 1298 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 93, 151, 152, 762, 824, 1373 |
| Bse1I | ACTGG | 2 cut(s) | 1009, 1653 |
| Bse3DI | GCAATG | 1 cut(s) | 415 |
| BseBI | CCWGG | 5 cut(s) | 88, 678, 763, 1407, 1418 |
| BseDI | CCNNGG | 7 cut(s) | 246, 676, 733, 846, 1038, 1417, 1659 |
| BseGI | GGATG | 2 cut(s) | 857, 1600 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 93, 151, 152, 762, 824, 1373 |
| BseMI | GCAATG | 1 cut(s) | 415 |
| BseMII | CTCAG | 4 cut(s) | 624, 678, 982, 1139 |
| BseNI | ACTGG | 2 cut(s) | 1009, 1653 |
| BseXI | GCAGC | 5 cut(s) | 523, 651, 809, 1659, 1687 |
| BsgI | GTGCAG | 3 cut(s) | 143, 585, 733 |
| Bsh1236I | CGCG | 1 cut(s) | 1274 |
| BshNI | GGYRCC | 4 cut(s) | 67, 96, 362, 1399 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1517 |
| BsiSI | CCGG | 5 cut(s) | 53, 359, 733, 840, 1299 |
| BslFI | GGGAC | 2 cut(s) | 127, 1613 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 93, 151, 152, 762, 824, 1373 |
| BsmAI | GTCTC | 3 cut(s) | 327, 881, 1153 |
| BsmBI | CGTCTC | 1 cut(s) | 1153 |
| BsmFI | GGGAC | 2 cut(s) | 127, 1613 |
| BsmI | GAATGC | 1 cut(s) | 900 |
| BsoBI | CYCGRG | 1 cut(s) | 1517 |
| Bsp119I | TTCGAA | 1 cut(s) | 908 |
| Bsp1407I | TGTACA | 1 cut(s) | 1629 |
| Bsp143I | GATC | 4 cut(s) | 340, 382, 520, 1069 |
| Bsp19I | CCATGG | 3 cut(s) | 246, 846, 1038 |
| BspACI | CCGC | 4 cut(s) | 166, 171, 279, 1572 |
| BspCNI | CTCAG | 4 cut(s) | 623, 679, 981, 1138 |
| BspFNI | CGCG | 1 cut(s) | 1274 |
| BspMAI | CTGCAG | 1 cut(s) | 1677 |
| BspMI | ACCTGC | 1 cut(s) | 267 |
| BspT104I | TTCGAA | 1 cut(s) | 908 |
| BspT107I | GGYRCC | 4 cut(s) | 67, 96, 362, 1399 |
| BsrDI | GCAATG | 1 cut(s) | 415 |
| BsrGI | TGTACA | 1 cut(s) | 1629 |
| BsrI | ACTGG | 2 cut(s) | 1009, 1653 |
| BssECI | CCNNGG | 7 cut(s) | 246, 676, 733, 846, 1038, 1417, 1659 |
| BssMI | GATC | 4 cut(s) | 340, 382, 520, 1069 |
| BssNI | GRCGYC | 1 cut(s) | 1146 |
| BssT1I | CCWWGG | 4 cut(s) | 246, 846, 1038, 1659 |
| Bst2UI | CCWGG | 5 cut(s) | 88, 678, 763, 1407, 1418 |
| Bst4CI | ACNGT | 4 cut(s) | 193, 648, 793, 1435 |
| Bst6I | CTCTTC | 1 cut(s) | 1335 |
| BstACI | GRCGYC | 1 cut(s) | 1146 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 803 |
| BstAUI | TGTACA | 1 cut(s) | 1629 |
| BstBI | TTCGAA | 1 cut(s) | 908 |
| BstC8I | GCNNGC | 2 cut(s) | 716, 740 |
| BstDEI | CTNAG | 4 cut(s) | 610, 687, 968, 1125 |
| BstDSI | CCRYGG | 3 cut(s) | 246, 846, 1038 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 822 |
| BstF5I | GGATG | 2 cut(s) | 857, 1600 |
| BstFNI | CGCG | 1 cut(s) | 1274 |
| BstHHI | GCGC | 2 cut(s) | 139, 1179 |
| BstKTI | GATC | 4 cut(s) | 343, 385, 523, 1072 |
| BstMAI | GTCTC | 3 cut(s) | 327, 881, 1153 |
| BstMBI | GATC | 4 cut(s) | 340, 382, 520, 1069 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 542, 803, 1249 |
| BstNI | CCWGG | 5 cut(s) | 88, 678, 763, 1407, 1418 |
| BstSCI | CCNGG | 7 cut(s) | 86, 358, 676, 732, 761, 1405, 1416 |
| BstSFI | CTRYAG | 2 cut(s) | 1287, 1673 |
| BstUI | CGCG | 1 cut(s) | 1274 |
| BstV1I | GCAGC | 5 cut(s) | 523, 651, 809, 1659, 1687 |
| BstV2I | GAAGAC | 1 cut(s) | 1269 |
| BstX2I | RGATCY | 1 cut(s) | 1069 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1660 |
| BstYI | RGATCY | 1 cut(s) | 1069 |
| BsuI | GTATCC | 1 cut(s) | 992 |
| BtgI | CCRYGG | 3 cut(s) | 246, 846, 1038 |
| BtsCI | GGATG | 2 cut(s) | 857, 1600 |
| BtsI | GCAGTG | 1 cut(s) | 366 |
| BtsIMutI | CAGTG | 2 cut(s) | 366, 378 |
| BveI | ACCTGC | 1 cut(s) | 267 |
| Cac8I | GCNNGC | 2 cut(s) | 716, 740 |
| CfoI | GCGC | 2 cut(s) | 139, 1179 |
| Cfr13I | GGNCC | 2 cut(s) | 1600, 1704 |
| CseI | GACGC | 1 cut(s) | 1263 |
| CsiI | ACCWGGT | 1 cut(s) | 1405 |
| Csp6I | GTAC | 6 cut(s) | 394, 1112, 1202, 1439, 1567, 1630 |
| CviAII | CATG | 9 cut(s) | 72, 76, 242, 247, 515, 847, 1039, 1623, 1693 |
| CviQI | GTAC | 6 cut(s) | 394, 1112, 1202, 1439, 1567, 1630 |
| DdeI | CTNAG | 4 cut(s) | 610, 687, 968, 1125 |
| DpnI | GATC | 4 cut(s) | 342, 384, 522, 1071 |
| DpnII | GATC | 4 cut(s) | 340, 382, 520, 1069 |
| DraIII | CACNNNGTG | 1 cut(s) | 1409 |
| Eam1104I | CTCTTC | 1 cut(s) | 1335 |
| EarI | CTCTTC | 1 cut(s) | 1335 |
| Eco130I | CCWWGG | 4 cut(s) | 246, 846, 1038, 1659 |
| Eco47I | GGWCC | 2 cut(s) | 1600, 1704 |
| Eco57I | CTGAAG | 3 cut(s) | 559, 1050, 1274 |
| Eco88I | CYCGRG | 1 cut(s) | 1517 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 822 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1600 |
| EcoRII | CCWGG | 5 cut(s) | 86, 676, 761, 1405, 1416 |
| EcoT14I | CCWWGG | 4 cut(s) | 246, 846, 1038, 1659 |
| EcoT22I | ATGCAT | 4 cut(s) | 77, 779, 1543, 1694 |
| ErhI | CCWWGG | 4 cut(s) | 246, 846, 1038, 1659 |
| Esp3I | CGTCTC | 1 cut(s) | 1153 |
| FaeI | CATG | 9 cut(s) | 75, 79, 245, 250, 518, 850, 1042, 1626, 1696 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1048, 1080 |
| FaqI | GGGAC | 2 cut(s) | 127, 1613 |
| FatI | CATG | 9 cut(s) | 71, 75, 241, 246, 514, 846, 1038, 1622, 1692 |
| FauNDI | CATATG | 1 cut(s) | 1207 |
| FblI | GTMKAC | 2 cut(s) | 43, 195 |
| Fnu4HI | GCNGC | 5 cut(s) | 537, 665, 798, 1673, 1676 |
| FokI | GGATG | 2 cut(s) | 864, 1607 |
| Fsp4HI | GCNGC | 5 cut(s) | 537, 665, 798, 1673, 1676 |
| FspBI | CTAG | 1 cut(s) | 824 |
| GlaI | GCGC | 2 cut(s) | 138, 1178 |
| GluI | GCNGC | 5 cut(s) | 537, 665, 798, 1673, 1676 |
| GsuI | CTGGAG | 1 cut(s) | 1343 |
| HapII | CCGG | 5 cut(s) | 53, 359, 733, 840, 1299 |
| HgaI | GACGC | 1 cut(s) | 1263 |
| HhaI | GCGC | 2 cut(s) | 139, 1179 |
| Hin1I | GRCGYC | 1 cut(s) | 1146 |
| Hin1II | CATG | 9 cut(s) | 75, 79, 245, 250, 518, 850, 1042, 1626, 1696 |
| Hin6I | GCGC | 2 cut(s) | 137, 1177 |
| HinP1I | GCGC | 2 cut(s) | 137, 1177 |
| HindIII | AAGCTT | 1 cut(s) | 1527 |
| HpaII | CCGG | 5 cut(s) | 53, 359, 733, 840, 1299 |
| HphI | GGTGA | 3 cut(s) | 42, 1238, 1421 |
| Hpy166II | GTNNAC | 3 cut(s) | 44, 196, 505 |
| Hpy188I | TCNGA | 8 cut(s) | 559, 578, 637, 971, 1069, 1344, 1356, 1368 |
| Hpy188III | TCNNGA | 3 cut(s) | 386, 1480, 1517 |
| Hpy8I | GTNNAC | 3 cut(s) | 44, 196, 505 |
| HpyAV | CCTTC | 4 cut(s) | 52, 564, 904, 1344 |
| HpyCH4III | ACNGT | 4 cut(s) | 193, 648, 793, 1435 |
| HpyCH4IV | ACGT | 2 cut(s) | 1146, 1454 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 542, 803, 1249 |
| HpyF3I | CTNAG | 4 cut(s) | 610, 687, 968, 1125 |
| HpySE526I | ACGT | 2 cut(s) | 1146, 1454 |
| Hsp92I | GRCGYC | 1 cut(s) | 1146 |
| Hsp92II | CATG | 9 cut(s) | 75, 79, 245, 250, 518, 850, 1042, 1626, 1696 |
| HspAI | GCGC | 2 cut(s) | 137, 1177 |
| KflI | GGGWCCC | 1 cut(s) | 1600 |
| Kzo9I | GATC | 4 cut(s) | 340, 382, 520, 1069 |
| LmnI | GCTCC | 3 cut(s) | 707, 842, 1324 |
| Lsp1109I | GCAGC | 5 cut(s) | 523, 651, 809, 1659, 1687 |
| LweI | GCATC | 3 cut(s) | 217, 1348, 1550 |
| MabI | ACCWGGT | 1 cut(s) | 1405 |
| MaeI | CTAG | 1 cut(s) | 824 |
| MaeII | ACGT | 2 cut(s) | 1146, 1454 |
| MaeIII | GTNAC | 2 cut(s) | 569, 1521 |
| MalI | GATC | 4 cut(s) | 342, 384, 522, 1071 |
| MboI | GATC | 4 cut(s) | 340, 382, 520, 1069 |
| MfeI | CAATTG | 2 cut(s) | 1637, 1699 |
| MflI | RGATCY | 1 cut(s) | 1069 |
| MlyI | GAGTC | 1 cut(s) | 1529 |
| MmeI | TCCRAC | 1 cut(s) | 1085 |
| MnlI | CCTC | 8 cut(s) | 10, 156, 275, 682, 794, 1131, 1338, 1415 |
| Mph1103I | ATGCAT | 4 cut(s) | 77, 779, 1543, 1694 |
| MroXI | GAANNNNTTC | 1 cut(s) | 963 |
| MseI | TTAA | 2 cut(s) | 425, 1190 |
| MslI | CAYNNNNRTG | 2 cut(s) | 80, 531 |
| MspA1I | CMGCKG | 2 cut(s) | 614, 1321 |
| MspI | CCGG | 5 cut(s) | 53, 359, 733, 840, 1299 |
| MspR9I | CCNGG | 7 cut(s) | 88, 360, 678, 734, 763, 1407, 1418 |
| MunI | CAATTG | 2 cut(s) | 1637, 1699 |
| Mva1269I | GAATGC | 1 cut(s) | 900 |
| MvaI | CCWGG | 5 cut(s) | 88, 678, 763, 1407, 1418 |
| MvnI | CGCG | 1 cut(s) | 1274 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 542, 803, 1249 |
| NciI | CCSGG | 2 cut(s) | 360, 734 |
| NcoI | CCATGG | 3 cut(s) | 246, 846, 1038 |
| NdeI | CATATG | 1 cut(s) | 1207 |
| NdeII | GATC | 4 cut(s) | 340, 382, 520, 1069 |
| NlaIII | CATG | 9 cut(s) | 75, 79, 245, 250, 518, 850, 1042, 1626, 1696 |
| NmuCI | GTSAC | 2 cut(s) | 569, 1521 |
| NsiI | ATGCAT | 4 cut(s) | 77, 779, 1543, 1694 |
| NspV | TTCGAA | 1 cut(s) | 908 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 311 |
| PctI | GAATGC | 1 cut(s) | 900 |
| PdmI | GAANNNNTTC | 1 cut(s) | 963 |
| PfeI | GAWTC | 9 cut(s) | 302, 374, 560, 693, 950, 964, 1005, 1034, 1229 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 93 |
| PfoI | TCCNGGA | 1 cut(s) | 761 |
| PkrI | GCNGC | 5 cut(s) | 538, 666, 799, 1674, 1677 |
| PleI | GAGTC | 1 cut(s) | 1528 |
| PpsI | GAGTC | 1 cut(s) | 1528 |
| PpuMI | RGGWCCY | 1 cut(s) | 1600 |
| Psp5II | RGGWCCY | 1 cut(s) | 1600 |
| Psp6I | CCWGG | 5 cut(s) | 86, 676, 761, 1405, 1416 |
| PspGI | CCWGG | 5 cut(s) | 86, 676, 761, 1405, 1416 |
| PspPI | GGNCC | 2 cut(s) | 1600, 1704 |
| PspPPI | RGGWCCY | 1 cut(s) | 1600 |
| PstI | CTGCAG | 1 cut(s) | 1677 |
| PsuI | RGATCY | 1 cut(s) | 1069 |
| PvuII | CAGCTG | 2 cut(s) | 614, 1321 |
| RsaI | GTAC | 6 cut(s) | 395, 1113, 1203, 1440, 1568, 1631 |
| RsaNI | GTAC | 6 cut(s) | 394, 1112, 1202, 1439, 1567, 1630 |
| RseI | CAYNNNNRTG | 2 cut(s) | 80, 531 |
| SaqAI | TTAA | 2 cut(s) | 425, 1190 |
| SatI | GCNGC | 5 cut(s) | 537, 665, 798, 1673, 1676 |
| Sau3AI | GATC | 4 cut(s) | 340, 382, 520, 1069 |
| Sau96I | GGNCC | 2 cut(s) | 1600, 1704 |
| ScaI | AGTACT | 1 cut(s) | 1568 |
| SchI | GAGTC | 1 cut(s) | 1529 |
| ScrFI | CCNGG | 7 cut(s) | 88, 360, 678, 734, 763, 1407, 1418 |
| SexAI | ACCWGGT | 1 cut(s) | 1405 |
| SfaNI | GCATC | 3 cut(s) | 217, 1348, 1550 |
| SfcI | CTRYAG | 2 cut(s) | 1287, 1673 |
| SfuI | TTCGAA | 1 cut(s) | 908 |
| SinI | GGWCC | 2 cut(s) | 1600, 1704 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 80, 531 |
| SsiI | CCGC | 4 cut(s) | 166, 171, 279, 1572 |
| SspMI | CTAG | 1 cut(s) | 824 |
| StyD4I | CCNGG | 7 cut(s) | 86, 358, 676, 732, 761, 1405, 1416 |
| StyI | CCWWGG | 4 cut(s) | 246, 846, 1038, 1659 |
| TaaI | ACNGT | 4 cut(s) | 193, 648, 793, 1435 |
| TaiI | ACGT | 2 cut(s) | 1149, 1457 |
| TaqI | TCGA | 6 cut(s) | 314, 343, 655, 866, 900, 908 |
| TatI | WGTACW | 3 cut(s) | 1438, 1566, 1629 |
| TfiI | GAWTC | 9 cut(s) | 302, 374, 560, 693, 950, 964, 1005, 1034, 1229 |
| Tru1I | TTAA | 2 cut(s) | 425, 1190 |
| Tru9I | TTAA | 2 cut(s) | 425, 1190 |
| TscAI | CASTG | 2 cut(s) | 373, 385 |
| TseFI | GTSAC | 2 cut(s) | 569, 1521 |
| TseI | GCWGC | 5 cut(s) | 536, 664, 797, 1672, 1675 |
| Tsp45I | GTSAC | 2 cut(s) | 569, 1521 |
| TspGWI | ACGGA | 1 cut(s) | 1017 |
| TspRI | CASTG | 2 cut(s) | 373, 385 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 93 |
| VpaK11BI | GGWCC | 2 cut(s) | 1600, 1704 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 822 |
| XapI | RAATTY | 2 cut(s) | 1185, 1485 |
| XmiI | GTMKAC | 2 cut(s) | 43, 195 |
| XmnI | GAANNNNTTC | 1 cut(s) | 963 |
| XspI | CTAG | 1 cut(s) | 824 |
| ZraI | GACGTC | 1 cut(s) | 1147 |
| ZrmI | AGTACT | 1 cut(s) | 1568 |
| Zsp2I | ATGCAT | 4 cut(s) | 77, 779, 1543, 1694 |