The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Chloroa_b-bind | PF00504 | 66 - 232 | 3e-50 | Chlorophyll A-B binding protein |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 159 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 79 |
| AccI | GTMKAC | 1 cut(s) | 128 |
| AccII | CGCG | 1 cut(s) | 461 |
| AciI | CCGC | 3 cut(s) | 93, 243, 560 |
| AclWI | GGATC | 4 cut(s) | 448, 599, 612, 737 |
| AcoI | YGGCCR | 3 cut(s) | 3, 37, 97 |
| AcsI | RAATTY | 2 cut(s) | 348, 371 |
| AcuI | CTGAAG | 1 cut(s) | 647 |
| AcyI | GRCGYC | 1 cut(s) | 84 |
| AfaI | GTAC | 2 cut(s) | 118, 170 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 79 |
| AgsI | TTSAA | 5 cut(s) | 293, 394, 491, 515, 592 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 111 |
| AjnI | CCWGG | 1 cut(s) | 761 |
| AluBI | AGCT | 4 cut(s) | 14, 289, 625, 640 |
| AluI | AGCT | 4 cut(s) | 14, 289, 625, 640 |
| Alw21I | GWGCWC | 3 cut(s) | 328, 501, 642 |
| Alw26I | GTCTC | 2 cut(s) | 219, 260 |
| AlwI | GGATC | 4 cut(s) | 448, 599, 612, 737 |
| AoxI | GGCC | 3 cut(s) | 3, 37, 97 |
| ApoI | RAATTY | 2 cut(s) | 348, 371 |
| AspLEI | GCGC | 1 cut(s) | 463 |
| AspS9I | GGNCC | 4 cut(s) | 152, 176, 536, 710 |
| AsuC2I | CCSGG | 4 cut(s) | 222, 263, 570, 789 |
| AsuHPI | GGTGA | 1 cut(s) | 643 |
| AvaII | GGWCC | 4 cut(s) | 152, 176, 536, 710 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BamHI | GGATCC | 1 cut(s) | 604 |
| BanII | GRGCYC | 1 cut(s) | 642 |
| Bbv12I | GWGCWC | 3 cut(s) | 328, 501, 642 |
| BbvCI | CCTCAGC | 1 cut(s) | 600 |
| BccI | CCATC | 2 cut(s) | 303, 485 |
| BceAI | ACGGC | 4 cut(s) | 60, 84, 247, 368 |
| BciT130I | CCWGG | 1 cut(s) | 763 |
| BclI | TGATCA | 1 cut(s) | 730 |
| BcnI | CCSGG | 4 cut(s) | 222, 263, 570, 789 |
| BcoDI | GTCTC | 2 cut(s) | 219, 260 |
| BfmI | CTRYAG | 1 cut(s) | 520 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 482 |
| BmcAI | AGTACT | 1 cut(s) | 170 |
| Bme1390I | CCNGG | 5 cut(s) | 222, 263, 570, 763, 789 |
| Bme18I | GGWCC | 4 cut(s) | 152, 176, 536, 710 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 111 |
| BmgT120I | GGNCC | 4 cut(s) | 152, 176, 536, 710 |
| BmiI | GGNNCC | 3 cut(s) | 177, 606, 712 |
| BmrFI | CCNGG | 5 cut(s) | 222, 263, 570, 763, 789 |
| BmsI | GCATC | 3 cut(s) | 150, 323, 477 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 602, 634 |
| BpmI | CTGGAG | 2 cut(s) | 43, 231 |
| Bpu10I | CCTNAGC | 1 cut(s) | 600 |
| BpuEI | CTTGAG | 2 cut(s) | 35, 626 |
| BpuMI | CCSGG | 4 cut(s) | 222, 263, 570, 789 |
| BsaHI | GRCGYC | 1 cut(s) | 84 |
| BsaJI | CCNNGG | 3 cut(s) | 220, 436, 787 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 369, 399 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 79 |
| Bse118I | RCCGGY | 1 cut(s) | 35 |
| Bse1I | ACTGG | 2 cut(s) | 214, 706 |
| BseBI | CCWGG | 1 cut(s) | 763 |
| BseDI | CCNNGG | 3 cut(s) | 220, 436, 787 |
| BseGI | GGATG | 2 cut(s) | 69, 338 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 79 |
| BseMII | CTCAG | 4 cut(s) | 419, 429, 591, 612 |
| BseNI | ACTGG | 2 cut(s) | 214, 706 |
| BseYI | CCCAGC | 1 cut(s) | 234 |
| Bsh1236I | CGCG | 1 cut(s) | 461 |
| Bsh1285I | CGRYCG | 1 cut(s) | 652 |
| BshFI | GGCC | 3 cut(s) | 5, 39, 99 |
| BsiEI | CGRYCG | 1 cut(s) | 652 |
| BsiHKAI | GWGCWC | 3 cut(s) | 328, 501, 642 |
| BsiSI | CCGG | 5 cut(s) | 36, 222, 263, 570, 789 |
| BslFI | GGGAC | 5 cut(s) | 147, 189, 251, 696, 770 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 79 |
| BsmAI | GTCTC | 2 cut(s) | 219, 260 |
| BsmFI | GGGAC | 5 cut(s) | 147, 189, 251, 696, 770 |
| BsnI | GGCC | 3 cut(s) | 5, 39, 99 |
| Bsp1286I | GDGCHC | 3 cut(s) | 328, 501, 642 |
| Bsp143I | GATC | 4 cut(s) | 453, 604, 730, 742 |
| BspACI | CCGC | 3 cut(s) | 93, 243, 560 |
| BspANI | GGCC | 3 cut(s) | 5, 39, 99 |
| BspCNI | CTCAG | 4 cut(s) | 418, 428, 592, 613 |
| BspFNI | CGCG | 1 cut(s) | 461 |
| BspLI | GGNNCC | 3 cut(s) | 177, 606, 712 |
| BspPI | GGATC | 4 cut(s) | 448, 599, 612, 737 |
| BsrFI | RCCGGY | 1 cut(s) | 35 |
| BsrI | ACTGG | 2 cut(s) | 214, 706 |
| BssAI | RCCGGY | 1 cut(s) | 35 |
| BssECI | CCNNGG | 3 cut(s) | 220, 436, 787 |
| BssMI | GATC | 4 cut(s) | 453, 604, 730, 742 |
| BssNI | GRCGYC | 1 cut(s) | 84 |
| Bst2UI | CCWGG | 1 cut(s) | 763 |
| Bst4CI | ACNGT | 6 cut(s) | 121, 161, 198, 284, 365, 650 |
| BstACI | GRCGYC | 1 cut(s) | 84 |
| BstC8I | GCNNGC | 2 cut(s) | 37, 400 |
| BstDEI | CTNAG | 6 cut(s) | 276, 405, 415, 472, 600, 621 |
| BstF5I | GGATG | 2 cut(s) | 69, 338 |
| BstFNI | CGCG | 1 cut(s) | 461 |
| BstHHI | GCGC | 1 cut(s) | 463 |
| BstKTI | GATC | 4 cut(s) | 456, 607, 733, 745 |
| BstMAI | GTCTC | 2 cut(s) | 219, 260 |
| BstMBI | GATC | 4 cut(s) | 453, 604, 730, 742 |
| BstMCI | CGRYCG | 1 cut(s) | 652 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 11, 90, 482, 758 |
| BstNI | CCWGG | 1 cut(s) | 763 |
| BstSCI | CCNGG | 5 cut(s) | 220, 261, 568, 761, 787 |
| BstSFI | CTRYAG | 1 cut(s) | 520 |
| BstUI | CGCG | 1 cut(s) | 461 |
| BstX2I | RGATCY | 1 cut(s) | 604 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 172 |
| BstYI | RGATCY | 1 cut(s) | 604 |
| BsuRI | GGCC | 3 cut(s) | 5, 39, 99 |
| BtsCI | GGATG | 2 cut(s) | 69, 338 |
| Cac8I | GCNNGC | 2 cut(s) | 37, 400 |
| CfoI | GCGC | 1 cut(s) | 463 |
| Cfr10I | RCCGGY | 1 cut(s) | 35 |
| Cfr13I | GGNCC | 4 cut(s) | 152, 176, 536, 710 |
| CseI | GACGC | 2 cut(s) | 73, 101 |
| Csp6I | GTAC | 2 cut(s) | 117, 169 |
| CviAII | CATG | 3 cut(s) | 109, 502, 661 |
| CviQI | GTAC | 2 cut(s) | 117, 169 |
| DdeI | CTNAG | 6 cut(s) | 276, 405, 415, 472, 600, 621 |
| DpnI | GATC | 4 cut(s) | 455, 606, 732, 744 |
| DpnII | GATC | 4 cut(s) | 453, 604, 730, 742 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 159 |
| DriI | GACNNNNNGTC | 1 cut(s) | 111 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 159 |
| EaeI | YGGCCR | 3 cut(s) | 3, 37, 97 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 111 |
| Ecl136II | GAGCTC | 1 cut(s) | 640 |
| Eco24I | GRGCYC | 1 cut(s) | 642 |
| Eco47I | GGWCC | 4 cut(s) | 152, 176, 536, 710 |
| Eco53kI | GAGCTC | 1 cut(s) | 640 |
| Eco57I | CTGAAG | 1 cut(s) | 647 |
| EcoICRI | GAGCTC | 1 cut(s) | 640 |
| EcoO109I | RGGNCCY | 1 cut(s) | 710 |
| EcoRII | CCWGG | 1 cut(s) | 761 |
| EcoT38I | GRGCYC | 1 cut(s) | 642 |
| FaeI | CATG | 3 cut(s) | 112, 505, 664 |
| FaiI | YATR | 6 cut(s) | 110, 150, 317, 503, 662, 671 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 411, 443 |
| FaqI | GGGAC | 5 cut(s) | 147, 189, 251, 696, 770 |
| FatI | CATG | 3 cut(s) | 108, 501, 660 |
| FauI | CCCGC | 1 cut(s) | 567 |
| FbaI | TGATCA | 1 cut(s) | 730 |
| FblI | GTMKAC | 1 cut(s) | 128 |
| FokI | GGATG | 2 cut(s) | 56, 345 |
| FriOI | GRGCYC | 1 cut(s) | 642 |
| GlaI | GCGC | 1 cut(s) | 462 |
| GsaI | CCCAGC | 1 cut(s) | 238 |
| GsuI | CTGGAG | 2 cut(s) | 43, 231 |
| HaeIII | GGCC | 3 cut(s) | 5, 39, 99 |
| HapII | CCGG | 5 cut(s) | 36, 222, 263, 570, 789 |
| HgaI | GACGC | 2 cut(s) | 73, 101 |
| HhaI | GCGC | 1 cut(s) | 463 |
| Hin1I | GRCGYC | 1 cut(s) | 84 |
| Hin1II | CATG | 3 cut(s) | 112, 505, 664 |
| Hin6I | GCGC | 1 cut(s) | 461 |
| HinP1I | GCGC | 1 cut(s) | 461 |
| HinfI | GANTC | 3 cut(s) | 249, 525, 678 |
| HpaII | CCGG | 5 cut(s) | 36, 222, 263, 570, 789 |
| HphI | GGTGA | 1 cut(s) | 643 |
| Hpy166II | GTNNAC | 2 cut(s) | 129, 536 |
| Hpy188I | TCNGA | 9 cut(s) | 187, 332, 377, 408, 418, 440, 530, 545, 622 |
| Hpy188III | TCNNGA | 3 cut(s) | 428, 608, 643 |
| Hpy8I | GTNNAC | 2 cut(s) | 129, 536 |
| Hpy99I | CGWCG | 1 cut(s) | 117 |
| HpyAV | CCTTC | 6 cut(s) | 40, 413, 509, 542, 622, 628 |
| HpyCH4III | ACNGT | 6 cut(s) | 121, 161, 198, 284, 365, 650 |
| HpyCH4V | TGCA | 1 cut(s) | 336 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 11, 90, 482, 758 |
| HpyF3I | CTNAG | 6 cut(s) | 276, 405, 415, 472, 600, 621 |
| Hsp92I | GRCGYC | 1 cut(s) | 84 |
| Hsp92II | CATG | 3 cut(s) | 112, 505, 664 |
| HspAI | GCGC | 1 cut(s) | 461 |
| KroI | GCCGGC | 1 cut(s) | 35 |
| KroNI | GCCGGC | 1 cut(s) | 37 |
| Ksp22I | TGATCA | 1 cut(s) | 730 |
| Kzo9I | GATC | 4 cut(s) | 453, 604, 730, 742 |
| LmnI | GCTCC | 1 cut(s) | 637 |
| LweI | GCATC | 3 cut(s) | 150, 323, 477 |
| MaeIII | GTNAC | 2 cut(s) | 103, 697 |
| MalI | GATC | 4 cut(s) | 455, 606, 732, 744 |
| MboI | GATC | 4 cut(s) | 453, 604, 730, 742 |
| MflI | RGATCY | 1 cut(s) | 604 |
| MhlI | GDGCHC | 3 cut(s) | 328, 501, 642 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluCI | AATT | 2 cut(s) | 348, 371 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MlyI | GAGTC | 1 cut(s) | 243 |
| MmeI | TCCRAC | 1 cut(s) | 43 |
| MnlI | CCTC | 9 cut(s) | 37, 67, 77, 416, 446, 524, 566, 595, 604 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| MroNI | GCCGGC | 1 cut(s) | 35 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MseI | TTAA | 2 cut(s) | 206, 369 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspA1I | CMGCKG | 1 cut(s) | 245 |
| MspI | CCGG | 5 cut(s) | 36, 222, 263, 570, 789 |
| MspR9I | CCNGG | 5 cut(s) | 222, 263, 570, 763, 789 |
| MvaI | CCWGG | 1 cut(s) | 763 |
| MvnI | CGCG | 1 cut(s) | 461 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 11, 90, 482, 758 |
| NaeI | GCCGGC | 1 cut(s) | 37 |
| NciI | CCSGG | 4 cut(s) | 222, 263, 570, 789 |
| NdeII | GATC | 4 cut(s) | 453, 604, 730, 742 |
| NgoMIV | GCCGGC | 1 cut(s) | 35 |
| NlaIII | CATG | 3 cut(s) | 112, 505, 664 |
| NlaIV | GGNNCC | 3 cut(s) | 177, 606, 712 |
| NmeAIII | GCCGAG | 1 cut(s) | 233 |
| NmuCI | GTSAC | 1 cut(s) | 103 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 381 |
| PdiI | GCCGGC | 1 cut(s) | 37 |
| PfeI | GAWTC | 2 cut(s) | 525, 678 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 79 |
| PfoI | TCCNGGA | 1 cut(s) | 568 |
| PleI | GAGTC | 1 cut(s) | 243 |
| PpsI | GAGTC | 1 cut(s) | 243 |
| PpuMI | RGGWCCY | 1 cut(s) | 710 |
| Psp124BI | GAGCTC | 1 cut(s) | 642 |
| Psp5II | RGGWCCY | 1 cut(s) | 710 |
| Psp6I | CCWGG | 1 cut(s) | 761 |
| PspFI | CCCAGC | 1 cut(s) | 234 |
| PspGI | CCWGG | 1 cut(s) | 761 |
| PspN4I | GGNNCC | 3 cut(s) | 177, 606, 712 |
| PspPI | GGNCC | 4 cut(s) | 152, 176, 536, 710 |
| PspPPI | RGGWCCY | 1 cut(s) | 710 |
| PsuI | RGATCY | 1 cut(s) | 604 |
| RsaI | GTAC | 2 cut(s) | 118, 170 |
| RsaNI | GTAC | 2 cut(s) | 117, 169 |
| SacI | GAGCTC | 1 cut(s) | 642 |
| SaqAI | TTAA | 2 cut(s) | 206, 369 |
| Sau3AI | GATC | 4 cut(s) | 453, 604, 730, 742 |
| Sau96I | GGNCC | 4 cut(s) | 152, 176, 536, 710 |
| ScaI | AGTACT | 1 cut(s) | 170 |
| SchI | GAGTC | 1 cut(s) | 243 |
| ScrFI | CCNGG | 5 cut(s) | 222, 263, 570, 763, 789 |
| SduI | GDGCHC | 3 cut(s) | 328, 501, 642 |
| SfaNI | GCATC | 3 cut(s) | 150, 323, 477 |
| SfcI | CTRYAG | 1 cut(s) | 520 |
| SinI | GGWCC | 4 cut(s) | 152, 176, 536, 710 |
| SmlI | CTYRAG | 2 cut(s) | 50, 641 |
| SmoI | CTYRAG | 2 cut(s) | 50, 641 |
| Sse9I | AATT | 2 cut(s) | 348, 371 |
| SsiI | CCGC | 3 cut(s) | 93, 243, 560 |
| SstI | GAGCTC | 1 cut(s) | 642 |
| StyD4I | CCNGG | 5 cut(s) | 220, 261, 568, 761, 787 |
| TaaI | ACNGT | 6 cut(s) | 121, 161, 198, 284, 365, 650 |
| TaqI | TCGA | 1 cut(s) | 582 |
| TasI | AATT | 2 cut(s) | 348, 371 |
| TatI | WGTACW | 1 cut(s) | 168 |
| TfiI | GAWTC | 2 cut(s) | 525, 678 |
| Tru1I | TTAA | 2 cut(s) | 206, 369 |
| Tru9I | TTAA | 2 cut(s) | 206, 369 |
| TseFI | GTSAC | 1 cut(s) | 103 |
| Tsp45I | GTSAC | 1 cut(s) | 103 |
| TspDTI | ATGAA | 1 cut(s) | 499 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 79 |
| VpaK11BI | GGWCC | 4 cut(s) | 152, 176, 536, 710 |
| XapI | RAATTY | 2 cut(s) | 348, 371 |
| XmiI | GTMKAC | 1 cut(s) | 128 |
| ZrmI | AGTACT | 1 cut(s) | 170 |