The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NIF | PF03031 | 75 - 204 | 6.2e-14 | NLI interacting factor-like phosphatase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 2 cut(s) | 685, 717 |
| AccB1I | GGYRCC | 4 cut(s) | 93, 527, 685, 717 |
| AciI | CCGC | 1 cut(s) | 179 |
| AclWI | GGATC | 2 cut(s) | 246, 458 |
| AcsI | RAATTY | 1 cut(s) | 639 |
| AcuI | CTGAAG | 1 cut(s) | 131 |
| AfaI | GTAC | 4 cut(s) | 393, 664, 687, 719 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 524, 537, 714 |
| AgsI | TTSAA | 5 cut(s) | 142, 377, 430, 450, 596 |
| AjnI | CCWGG | 3 cut(s) | 304, 720, 751 |
| Alw21I | GWGCWC | 1 cut(s) | 71 |
| Alw26I | GTCTC | 1 cut(s) | 242 |
| AlwI | GGATC | 2 cut(s) | 246, 458 |
| AoxI | GGCC | 1 cut(s) | 539 |
| ApeKI | GCWGC | 1 cut(s) | 106 |
| ApoI | RAATTY | 1 cut(s) | 639 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 149, 186 |
| Asp718I | GGTACC | 2 cut(s) | 685, 717 |
| AsuHPI | GGTGA | 1 cut(s) | 736 |
| AxyI | CCTNAGG | 1 cut(s) | 690 |
| BaeGI | GKGCMC | 1 cut(s) | 493 |
| BanI | GGYRCC | 4 cut(s) | 93, 527, 685, 717 |
| BanII | GRGCYC | 1 cut(s) | 71 |
| BauI | CACGAG | 1 cut(s) | 498 |
| Bbv12I | GWGCWC | 1 cut(s) | 71 |
| BbvCI | CCTCAGC | 1 cut(s) | 411 |
| BbvI | GCAGC | 1 cut(s) | 118 |
| BceAI | ACGGC | 1 cut(s) | 515 |
| BciT130I | CCWGG | 3 cut(s) | 306, 722, 753 |
| BcoDI | GTCTC | 1 cut(s) | 242 |
| BfaI | CTAG | 2 cut(s) | 90, 242 |
| BfmI | CTRYAG | 1 cut(s) | 512 |
| BisI | GCNGC | 1 cut(s) | 107 |
| BlsI | GCNGC | 1 cut(s) | 108 |
| Bme1390I | CCNGG | 3 cut(s) | 306, 722, 753 |
| BmiI | GGNNCC | 4 cut(s) | 95, 529, 687, 719 |
| BmrFI | CCNGG | 3 cut(s) | 306, 722, 753 |
| BmsI | GCATC | 5 cut(s) | 114, 211, 304, 625, 682 |
| BpmI | CTGGAG | 1 cut(s) | 327 |
| Bpu10I | CCTNAGC | 1 cut(s) | 411 |
| BsaBI | GATNNNNATC | 1 cut(s) | 201 |
| BsaJI | CCNNGG | 1 cut(s) | 207 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 718, 748 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 524, 537, 714 |
| Bse21I | CCTNAGG | 1 cut(s) | 690 |
| Bse8I | GATNNNNATC | 1 cut(s) | 201 |
| BseBI | CCWGG | 3 cut(s) | 306, 722, 753 |
| BseDI | CCNNGG | 1 cut(s) | 207 |
| BseGI | GGATG | 3 cut(s) | 202, 565, 582 |
| BseJI | GATNNNNATC | 1 cut(s) | 201 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 524, 537, 714 |
| BseMII | CTCAG | 5 cut(s) | 355, 402, 543, 639, 681 |
| BseRI | GAGGAG | 1 cut(s) | 260 |
| BseSI | GKGCMC | 1 cut(s) | 493 |
| BseXI | GCAGC | 1 cut(s) | 118 |
| BshFI | GGCC | 1 cut(s) | 541 |
| BshNI | GGYRCC | 4 cut(s) | 93, 527, 685, 717 |
| BsiHKAI | GWGCWC | 1 cut(s) | 71 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 524, 537, 714 |
| BsmAI | GTCTC | 1 cut(s) | 242 |
| BsmI | GAATGC | 1 cut(s) | 47 |
| BsnI | GGCC | 1 cut(s) | 541 |
| Bsp1286I | GDGCHC | 2 cut(s) | 71, 493 |
| Bsp143I | GATC | 4 cut(s) | 238, 294, 463, 474 |
| BspACI | CCGC | 1 cut(s) | 179 |
| BspANI | GGCC | 1 cut(s) | 541 |
| BspCNI | CTCAG | 5 cut(s) | 354, 403, 544, 640, 682 |
| BspLI | GGNNCC | 4 cut(s) | 95, 529, 687, 719 |
| BspPI | GGATC | 2 cut(s) | 246, 458 |
| BspT107I | GGYRCC | 4 cut(s) | 93, 527, 685, 717 |
| BssECI | CCNNGG | 1 cut(s) | 207 |
| BssMI | GATC | 4 cut(s) | 238, 294, 463, 474 |
| BssSI | CACGAG | 1 cut(s) | 498 |
| BssT1I | CCWWGG | 1 cut(s) | 207 |
| Bst2BI | CACGAG | 1 cut(s) | 498 |
| Bst2UI | CCWGG | 3 cut(s) | 306, 722, 753 |
| Bst4CI | ACNGT | 2 cut(s) | 391, 685 |
| BstC8I | GCNNGC | 3 cut(s) | 98, 287, 749 |
| BstDEI | CTNAG | 7 cut(s) | 322, 341, 411, 552, 648, 666, 690 |
| BstF5I | GGATG | 3 cut(s) | 202, 565, 582 |
| BstKTI | GATC | 4 cut(s) | 241, 297, 466, 477 |
| BstMAI | GTCTC | 1 cut(s) | 242 |
| BstMBI | GATC | 4 cut(s) | 238, 294, 463, 474 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 106, 112, 133 |
| BstNI | CCWGG | 3 cut(s) | 306, 722, 753 |
| BstSCI | CCNGG | 3 cut(s) | 304, 720, 751 |
| BstSFI | CTRYAG | 1 cut(s) | 512 |
| BstSLI | GKGCMC | 1 cut(s) | 493 |
| BstV1I | GCAGC | 1 cut(s) | 118 |
| BstX2I | RGATCY | 2 cut(s) | 238, 463 |
| BstYI | RGATCY | 2 cut(s) | 238, 463 |
| Bsu36I | CCTNAGG | 1 cut(s) | 690 |
| BsuRI | GGCC | 1 cut(s) | 541 |
| BtsCI | GGATG | 3 cut(s) | 202, 565, 582 |
| Cac8I | GCNNGC | 3 cut(s) | 98, 287, 749 |
| CsiI | ACCWGGT | 1 cut(s) | 720 |
| Csp6I | GTAC | 4 cut(s) | 392, 663, 686, 718 |
| CviAII | CATG | 2 cut(s) | 494, 635 |
| CviQI | GTAC | 4 cut(s) | 392, 663, 686, 718 |
| DdeI | CTNAG | 7 cut(s) | 322, 341, 411, 552, 648, 666, 690 |
| DpnI | GATC | 4 cut(s) | 240, 296, 465, 476 |
| DpnII | GATC | 4 cut(s) | 238, 294, 463, 474 |
| Ecl136II | GAGCTC | 1 cut(s) | 69 |
| Eco130I | CCWWGG | 1 cut(s) | 207 |
| Eco24I | GRGCYC | 1 cut(s) | 71 |
| Eco53kI | GAGCTC | 1 cut(s) | 69 |
| Eco57I | CTGAAG | 1 cut(s) | 131 |
| Eco81I | CCTNAGG | 1 cut(s) | 690 |
| EcoICRI | GAGCTC | 1 cut(s) | 69 |
| EcoRII | CCWGG | 3 cut(s) | 304, 720, 751 |
| EcoT14I | CCWWGG | 1 cut(s) | 207 |
| EcoT22I | ATGCAT | 1 cut(s) | 618 |
| EcoT38I | GRGCYC | 1 cut(s) | 71 |
| ErhI | CCWWGG | 1 cut(s) | 207 |
| FaeI | CATG | 2 cut(s) | 497, 638 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 104, 136 |
| FatI | CATG | 2 cut(s) | 493, 634 |
| FauNDI | CATATG | 2 cut(s) | 57, 175 |
| Fnu4HI | GCNGC | 1 cut(s) | 107 |
| FokI | GGATG | 3 cut(s) | 189, 569, 572 |
| FriOI | GRGCYC | 1 cut(s) | 71 |
| Fsp4HI | GCNGC | 1 cut(s) | 107 |
| FspBI | CTAG | 2 cut(s) | 90, 242 |
| GluI | GCNGC | 1 cut(s) | 107 |
| GsuI | CTGGAG | 1 cut(s) | 327 |
| HaeIII | GGCC | 1 cut(s) | 541 |
| Hin1II | CATG | 2 cut(s) | 497, 638 |
| HindIII | AAGCTT | 2 cut(s) | 113, 185 |
| HphI | GGTGA | 1 cut(s) | 736 |
| Hpy188I | TCNGA | 5 cut(s) | 369, 486, 553, 605, 678 |
| Hpy188III | TCNNGA | 5 cut(s) | 194, 236, 242, 427, 593 |
| HpyAV | CCTTC | 1 cut(s) | 623 |
| HpyCH4III | ACNGT | 2 cut(s) | 391, 685 |
| HpyCH4IV | ACGT | 1 cut(s) | 728 |
| HpyCH4V | TGCA | 4 cut(s) | 127, 202, 497, 616 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 106, 112, 133 |
| HpyF3I | CTNAG | 7 cut(s) | 322, 341, 411, 552, 648, 666, 690 |
| HpySE526I | ACGT | 1 cut(s) | 728 |
| Hsp92II | CATG | 2 cut(s) | 497, 638 |
| KpnI | GGTACC | 2 cut(s) | 689, 721 |
| Kzo9I | GATC | 4 cut(s) | 238, 294, 463, 474 |
| LmnI | GCTCC | 4 cut(s) | 66, 670, 739, 744 |
| Lsp1109I | GCAGC | 1 cut(s) | 118 |
| LweI | GCATC | 5 cut(s) | 114, 211, 304, 625, 682 |
| MabI | ACCWGGT | 1 cut(s) | 720 |
| MaeI | CTAG | 2 cut(s) | 90, 242 |
| MaeII | ACGT | 1 cut(s) | 728 |
| MaeIII | GTNAC | 2 cut(s) | 724, 738 |
| MalI | GATC | 4 cut(s) | 240, 296, 465, 476 |
| MboI | GATC | 4 cut(s) | 238, 294, 463, 474 |
| MboII | GAAGA | 3 cut(s) | 154, 182, 415 |
| MfeI | CAATTG | 1 cut(s) | 137 |
| MflI | RGATCY | 2 cut(s) | 238, 463 |
| MhlI | GDGCHC | 2 cut(s) | 71, 493 |
| MluCI | AATT | 3 cut(s) | 137, 401, 639 |
| MmeI | TCCRAC | 1 cut(s) | 365 |
| MnlI | CCTC | 4 cut(s) | 125, 238, 406, 685 |
| Mph1103I | ATGCAT | 1 cut(s) | 618 |
| MroXI | GAANNNNTTC | 2 cut(s) | 149, 186 |
| MspA1I | CMGCKG | 2 cut(s) | 109, 647 |
| MspR9I | CCNGG | 3 cut(s) | 306, 722, 753 |
| MunI | CAATTG | 1 cut(s) | 137 |
| Mva1269I | GAATGC | 1 cut(s) | 47 |
| MvaI | CCWGG | 3 cut(s) | 306, 722, 753 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 106, 112, 133 |
| NdeI | CATATG | 2 cut(s) | 57, 175 |
| NdeII | GATC | 4 cut(s) | 238, 294, 463, 474 |
| NlaIII | CATG | 2 cut(s) | 497, 638 |
| NlaIV | GGNNCC | 4 cut(s) | 95, 529, 687, 719 |
| NmuCI | GTSAC | 1 cut(s) | 724 |
| NsiI | ATGCAT | 1 cut(s) | 618 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 734 |
| PctI | GAATGC | 1 cut(s) | 47 |
| PdmI | GAANNNNTTC | 2 cut(s) | 149, 186 |
| PkrI | GCNGC | 1 cut(s) | 108 |
| Psp124BI | GAGCTC | 1 cut(s) | 71 |
| Psp6I | CCWGG | 3 cut(s) | 304, 720, 751 |
| PspGI | CCWGG | 3 cut(s) | 304, 720, 751 |
| PspN4I | GGNNCC | 4 cut(s) | 95, 529, 687, 719 |
| PsuI | RGATCY | 2 cut(s) | 238, 463 |
| PvuII | CAGCTG | 2 cut(s) | 109, 647 |
| RsaI | GTAC | 4 cut(s) | 393, 664, 687, 719 |
| RsaNI | GTAC | 4 cut(s) | 392, 663, 686, 718 |
| SacI | GAGCTC | 1 cut(s) | 71 |
| SatI | GCNGC | 1 cut(s) | 107 |
| Sau3AI | GATC | 4 cut(s) | 238, 294, 463, 474 |
| ScrFI | CCNGG | 3 cut(s) | 306, 722, 753 |
| SduI | GDGCHC | 2 cut(s) | 71, 493 |
| SexAI | ACCWGGT | 1 cut(s) | 720 |
| SfaNI | GCATC | 5 cut(s) | 114, 211, 304, 625, 682 |
| SfcI | CTRYAG | 1 cut(s) | 512 |
| Sse9I | AATT | 3 cut(s) | 137, 401, 639 |
| SsiI | CCGC | 1 cut(s) | 179 |
| SspMI | CTAG | 2 cut(s) | 90, 242 |
| SstI | GAGCTC | 1 cut(s) | 71 |
| StyD4I | CCNGG | 3 cut(s) | 304, 720, 751 |
| StyI | CCWWGG | 1 cut(s) | 207 |
| TaaI | ACNGT | 2 cut(s) | 391, 685 |
| TaiI | ACGT | 1 cut(s) | 731 |
| TaqI | TCGA | 1 cut(s) | 153 |
| TasI | AATT | 3 cut(s) | 137, 401, 639 |
| TseFI | GTSAC | 1 cut(s) | 724 |
| TseI | GCWGC | 1 cut(s) | 106 |
| Tsp45I | GTSAC | 1 cut(s) | 724 |
| TspDTI | ATGAA | 7 cut(s) | 65, 365, 447, 571, 642, 643, 651 |
| TspGWI | ACGGA | 2 cut(s) | 726, 757 |
| XapI | RAATTY | 1 cut(s) | 639 |
| XbaI | TCTAGA | 1 cut(s) | 241 |
| XmnI | GAANNNNTTC | 2 cut(s) | 149, 186 |
| XspI | CTAG | 2 cut(s) | 90, 242 |
| Zsp2I | ATGCAT | 1 cut(s) | 618 |