The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Chloroa_b-bind | PF00504 | 34 - 200 | 4.2e-51 | Chlorophyll A-B binding protein |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 5 |
| AciI | CCGC | 3 cut(s) | 302, 327, 477 |
| AclWI | GGATC | 2 cut(s) | 482, 503 |
| AcoI | YGGCCR | 2 cut(s) | 561, 630 |
| AcsI | RAATTY | 3 cut(s) | 119, 312, 625 |
| AfaI | GTAC | 3 cut(s) | 53, 74, 470 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 53, 89 |
| AflII | CTTAAG | 1 cut(s) | 530 |
| AgsI | TTSAA | 2 cut(s) | 197, 298 |
| AjnI | CCWGG | 2 cut(s) | 124, 339 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 338, 370, 542, 574 |
| AluBI | AGCT | 4 cut(s) | 193, 354, 483, 544 |
| AluI | AGCT | 4 cut(s) | 193, 354, 483, 544 |
| Alw21I | GWGCWC | 1 cut(s) | 546 |
| Alw26I | GTCTC | 2 cut(s) | 164, 509 |
| AlwI | GGATC | 2 cut(s) | 482, 503 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 65, 167 |
| AoxI | GGCC | 3 cut(s) | 387, 561, 630 |
| ApeKI | GCWGC | 3 cut(s) | 14, 42, 237 |
| ApoI | RAATTY | 3 cut(s) | 119, 312, 625 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 448, 480 |
| AspLEI | GCGC | 2 cut(s) | 6, 230 |
| AspS9I | GGNCC | 6 cut(s) | 56, 80, 358, 387, 440, 614 |
| AsuC2I | CCSGG | 2 cut(s) | 474, 693 |
| AsuHPI | GGTGA | 6 cut(s) | 104, 140, 293, 461, 466, 547 |
| AvaII | GGWCC | 5 cut(s) | 56, 80, 358, 440, 614 |
| BalI | TGGCCA | 2 cut(s) | 563, 632 |
| BanII | GRGCYC | 2 cut(s) | 310, 546 |
| Bbv12I | GWGCWC | 1 cut(s) | 546 |
| BbvI | GCAGC | 3 cut(s) | 26, 54, 224 |
| BccI | CCATC | 3 cut(s) | 109, 207, 400 |
| BciT130I | CCWGG | 2 cut(s) | 126, 341 |
| BciVI | GTATCC | 1 cut(s) | 416 |
| BcnI | CCSGG | 2 cut(s) | 474, 693 |
| BcoDI | GTCTC | 2 cut(s) | 164, 509 |
| BfaI | CTAG | 2 cut(s) | 210, 332 |
| BfmI | CTRYAG | 2 cut(s) | 12, 159 |
| BfoI | RGCGCY | 1 cut(s) | 231 |
| BfrI | CTTAAG | 1 cut(s) | 530 |
| BfuI | GTATCC | 1 cut(s) | 416 |
| BisI | GCNGC | 3 cut(s) | 15, 43, 238 |
| BlsI | GCNGC | 3 cut(s) | 16, 44, 239 |
| BmcAI | AGTACT | 1 cut(s) | 74 |
| Bme1390I | CCNGG | 4 cut(s) | 126, 341, 474, 693 |
| Bme18I | GGWCC | 5 cut(s) | 56, 80, 358, 440, 614 |
| BmgT120I | GGNCC | 6 cut(s) | 56, 80, 358, 387, 440, 614 |
| BmiI | GGNNCC | 3 cut(s) | 81, 307, 615 |
| BmrFI | CCNGG | 4 cut(s) | 126, 341, 474, 693 |
| BpuEI | CTTGAG | 1 cut(s) | 530 |
| BpuMI | CCSGG | 2 cut(s) | 474, 693 |
| BsaJI | CCNNGG | 4 cut(s) | 47, 124, 340, 472 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 53, 89 |
| Bse118I | RCCGGY | 1 cut(s) | 434 |
| Bse1I | ACTGG | 1 cut(s) | 610 |
| Bse3DI | GCAATG | 1 cut(s) | 225 |
| BseBI | CCWGG | 2 cut(s) | 126, 341 |
| BseDI | CCNNGG | 4 cut(s) | 47, 124, 340, 472 |
| BseGI | GGATG | 2 cut(s) | 35, 201 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 53, 89 |
| BseMI | GCAATG | 1 cut(s) | 225 |
| BseMII | CTCAG | 1 cut(s) | 159 |
| BseNI | ACTGG | 1 cut(s) | 610 |
| BseXI | GCAGC | 3 cut(s) | 26, 54, 224 |
| BsgI | GTGCAG | 1 cut(s) | 432 |
| BshFI | GGCC | 3 cut(s) | 389, 563, 632 |
| BsiHKAI | GWGCWC | 1 cut(s) | 546 |
| BsiSI | CCGG | 5 cut(s) | 39, 150, 435, 474, 693 |
| BslFI | GGGAC | 3 cut(s) | 82, 155, 627 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 53, 89 |
| BsmAI | GTCTC | 2 cut(s) | 164, 509 |
| BsmFI | GGGAC | 3 cut(s) | 82, 155, 627 |
| BsnI | GGCC | 3 cut(s) | 389, 563, 632 |
| Bsp1286I | GDGCHC | 2 cut(s) | 310, 546 |
| Bsp143I | GATC | 2 cut(s) | 487, 508 |
| Bsp19I | CCATGG | 1 cut(s) | 47 |
| BspACI | CCGC | 3 cut(s) | 302, 327, 477 |
| BspANI | GGCC | 3 cut(s) | 389, 563, 632 |
| BspCNI | CTCAG | 1 cut(s) | 160 |
| BspLI | GGNNCC | 3 cut(s) | 81, 307, 615 |
| BspMAI | CTGCAG | 2 cut(s) | 16, 163 |
| BspPI | GGATC | 2 cut(s) | 482, 503 |
| BspTI | CTTAAG | 1 cut(s) | 530 |
| BsrDI | GCAATG | 1 cut(s) | 225 |
| BsrFI | RCCGGY | 1 cut(s) | 434 |
| BsrI | ACTGG | 1 cut(s) | 610 |
| BssAI | RCCGGY | 1 cut(s) | 434 |
| BssECI | CCNNGG | 4 cut(s) | 47, 124, 340, 472 |
| BssMI | GATC | 2 cut(s) | 487, 508 |
| BssT1I | CCWWGG | 1 cut(s) | 47 |
| Bst2UI | CCWGG | 2 cut(s) | 126, 341 |
| Bst4CI | ACNGT | 3 cut(s) | 56, 137, 188 |
| BstAFI | CTTAAG | 1 cut(s) | 530 |
| BstC8I | GCNNGC | 3 cut(s) | 329, 501, 594 |
| BstDEI | CTNAG | 2 cut(s) | 168, 180 |
| BstDSI | CCRYGG | 1 cut(s) | 47 |
| BstF5I | GGATG | 2 cut(s) | 35, 201 |
| BstH2I | RGCGCY | 1 cut(s) | 231 |
| BstHHI | GCGC | 2 cut(s) | 6, 230 |
| BstKTI | GATC | 2 cut(s) | 490, 511 |
| BstMAI | GTCTC | 2 cut(s) | 164, 509 |
| BstMBI | GATC | 2 cut(s) | 487, 508 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 234, 386 |
| BstNI | CCWGG | 2 cut(s) | 126, 341 |
| BstSCI | CCNGG | 4 cut(s) | 124, 339, 472, 691 |
| BstSFI | CTRYAG | 2 cut(s) | 12, 159 |
| BstV1I | GCAGC | 3 cut(s) | 26, 54, 224 |
| BstX2I | RGATCY | 1 cut(s) | 508 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 640 |
| BstYI | RGATCY | 1 cut(s) | 508 |
| BsuI | GTATCC | 1 cut(s) | 416 |
| BsuRI | GGCC | 3 cut(s) | 389, 563, 632 |
| BtgI | CCRYGG | 1 cut(s) | 47 |
| BtsCI | GGATG | 2 cut(s) | 35, 201 |
| BtsI | GCAGTG | 2 cut(s) | 144, 420 |
| BtsIMutI | CAGTG | 3 cut(s) | 144, 420, 603 |
| Cac8I | GCNNGC | 3 cut(s) | 329, 501, 594 |
| CaiI | CAGNNNCTG | 2 cut(s) | 65, 167 |
| CfoI | GCGC | 2 cut(s) | 6, 230 |
| Cfr10I | RCCGGY | 1 cut(s) | 434 |
| Cfr13I | GGNCC | 6 cut(s) | 56, 80, 358, 387, 440, 614 |
| Csp6I | GTAC | 3 cut(s) | 52, 73, 469 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 667, 702 |
| CviAII | CATG | 4 cut(s) | 48, 362, 565, 574 |
| CviQI | GTAC | 3 cut(s) | 52, 73, 469 |
| DdeI | CTNAG | 2 cut(s) | 168, 180 |
| DpnI | GATC | 2 cut(s) | 489, 510 |
| DpnII | GATC | 2 cut(s) | 487, 508 |
| EaeI | YGGCCR | 2 cut(s) | 561, 630 |
| Ecl136II | GAGCTC | 1 cut(s) | 544 |
| Eco130I | CCWWGG | 1 cut(s) | 47 |
| Eco24I | GRGCYC | 2 cut(s) | 310, 546 |
| Eco47I | GGWCC | 5 cut(s) | 56, 80, 358, 440, 614 |
| Eco53kI | GAGCTC | 1 cut(s) | 544 |
| EcoICRI | GAGCTC | 1 cut(s) | 544 |
| EcoO109I | RGGNCCY | 1 cut(s) | 80 |
| EcoRI | GAATTC | 1 cut(s) | 119 |
| EcoRII | CCWGG | 2 cut(s) | 124, 339 |
| EcoT14I | CCWWGG | 1 cut(s) | 47 |
| EcoT38I | GRGCYC | 2 cut(s) | 310, 546 |
| ErhI | CCWWGG | 1 cut(s) | 47 |
| FaeI | CATG | 4 cut(s) | 51, 365, 568, 577 |
| FaiI | YATR | 5 cut(s) | 49, 363, 566, 575, 675 |
| FaqI | GGGAC | 3 cut(s) | 82, 155, 627 |
| FatI | CATG | 4 cut(s) | 47, 361, 564, 573 |
| FauI | CCCGC | 3 cut(s) | 295, 320, 470 |
| Fnu4HI | GCNGC | 3 cut(s) | 15, 43, 238 |
| FokI | GGATG | 2 cut(s) | 22, 188 |
| FriOI | GRGCYC | 2 cut(s) | 310, 546 |
| Fsp4HI | GCNGC | 3 cut(s) | 15, 43, 238 |
| FspBI | CTAG | 2 cut(s) | 210, 332 |
| FspI | TGCGCA | 1 cut(s) | 5 |
| GlaI | GCGC | 2 cut(s) | 5, 229 |
| GluI | GCNGC | 3 cut(s) | 15, 43, 238 |
| HaeII | RGCGCY | 1 cut(s) | 231 |
| HaeIII | GGCC | 3 cut(s) | 389, 563, 632 |
| HapII | CCGG | 5 cut(s) | 39, 150, 435, 474, 693 |
| HhaI | GCGC | 2 cut(s) | 6, 230 |
| Hin1II | CATG | 4 cut(s) | 51, 365, 568, 577 |
| Hin6I | GCGC | 2 cut(s) | 4, 228 |
| HinP1I | GCGC | 2 cut(s) | 4, 228 |
| HincII | GTYRAC | 1 cut(s) | 655 |
| HindII | GTYRAC | 1 cut(s) | 655 |
| HindIII | AAGCTT | 1 cut(s) | 352 |
| HinfI | GANTC | 4 cut(s) | 95, 153, 270, 346 |
| HpaI | GTTAAC | 1 cut(s) | 655 |
| HpaII | CCGG | 5 cut(s) | 39, 150, 435, 474, 693 |
| HphI | GGTGA | 6 cut(s) | 104, 140, 293, 461, 466, 547 |
| Hpy166II | GTNNAC | 2 cut(s) | 440, 655 |
| Hpy188I | TCNGA | 1 cut(s) | 581 |
| Hpy188III | TCNNGA | 5 cut(s) | 59, 210, 403, 512, 547 |
| Hpy8I | GTNNAC | 2 cut(s) | 440, 655 |
| HpyAV | CCTTC | 2 cut(s) | 317, 532 |
| HpyCH4III | ACNGT | 3 cut(s) | 56, 137, 188 |
| HpyCH4V | TGCA | 5 cut(s) | 14, 161, 240, 413, 592 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 234, 386 |
| HpyF3I | CTNAG | 2 cut(s) | 168, 180 |
| Hsp92II | CATG | 4 cut(s) | 51, 365, 568, 577 |
| HspAI | GCGC | 2 cut(s) | 4, 228 |
| KspAI | GTTAAC | 1 cut(s) | 655 |
| Kzo9I | GATC | 2 cut(s) | 487, 508 |
| LmnI | GCTCC | 3 cut(s) | 305, 480, 541 |
| Lsp1109I | GCAGC | 3 cut(s) | 26, 54, 224 |
| MaeI | CTAG | 2 cut(s) | 210, 332 |
| MaeIII | GTNAC | 2 cut(s) | 454, 601 |
| MalI | GATC | 2 cut(s) | 489, 510 |
| MboI | GATC | 2 cut(s) | 487, 508 |
| MboII | GAAGA | 2 cut(s) | 518, 567 |
| MfeI | CAATTG | 1 cut(s) | 618 |
| MflI | RGATCY | 1 cut(s) | 508 |
| MhlI | GDGCHC | 2 cut(s) | 310, 546 |
| MlsI | TGGCCA | 2 cut(s) | 563, 632 |
| MluCI | AATT | 6 cut(s) | 119, 312, 381, 429, 618, 625 |
| MluNI | TGGCCA | 2 cut(s) | 563, 632 |
| MlyI | GAGTC | 3 cut(s) | 104, 147, 279 |
| MnlI | CCTC | 5 cut(s) | 119, 277, 412, 445, 453 |
| Mox20I | TGGCCA | 2 cut(s) | 563, 632 |
| MscI | TGGCCA | 2 cut(s) | 563, 632 |
| MseI | TTAA | 2 cut(s) | 531, 654 |
| Msp20I | TGGCCA | 2 cut(s) | 563, 632 |
| MspCI | CTTAAG | 1 cut(s) | 530 |
| MspI | CCGG | 5 cut(s) | 39, 150, 435, 474, 693 |
| MspR9I | CCNGG | 4 cut(s) | 126, 341, 474, 693 |
| MunI | CAATTG | 1 cut(s) | 618 |
| MvaI | CCWGG | 2 cut(s) | 126, 341 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 234, 386 |
| NciI | CCSGG | 2 cut(s) | 474, 693 |
| NcoI | CCATGG | 1 cut(s) | 47 |
| NdeII | GATC | 2 cut(s) | 487, 508 |
| NlaIII | CATG | 4 cut(s) | 51, 365, 568, 577 |
| NlaIV | GGNNCC | 3 cut(s) | 81, 307, 615 |
| NmeAIII | GCCGAG | 1 cut(s) | 204 |
| NmuCI | GTSAC | 2 cut(s) | 454, 601 |
| NsbI | TGCGCA | 1 cut(s) | 5 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 677 |
| PfeI | GAWTC | 1 cut(s) | 346 |
| PflFI | GACNNNGTC | 1 cut(s) | 65 |
| PfoI | TCCNGGA | 1 cut(s) | 691 |
| PkrI | GCNGC | 3 cut(s) | 16, 44, 239 |
| PleI | GAGTC | 3 cut(s) | 103, 147, 278 |
| PpsI | GAGTC | 3 cut(s) | 103, 147, 278 |
| PpuMI | RGGWCCY | 1 cut(s) | 80 |
| Psp124BI | GAGCTC | 1 cut(s) | 546 |
| Psp5II | RGGWCCY | 1 cut(s) | 80 |
| Psp6I | CCWGG | 2 cut(s) | 124, 339 |
| PspGI | CCWGG | 2 cut(s) | 124, 339 |
| PspN4I | GGNNCC | 3 cut(s) | 81, 307, 615 |
| PspPI | GGNCC | 6 cut(s) | 56, 80, 358, 387, 440, 614 |
| PspPPI | RGGWCCY | 1 cut(s) | 80 |
| PstI | CTGCAG | 2 cut(s) | 16, 163 |
| PstNI | CAGNNNCTG | 2 cut(s) | 65, 167 |
| PsuI | RGATCY | 1 cut(s) | 508 |
| PsyI | GACNNNGTC | 1 cut(s) | 65 |
| RsaI | GTAC | 3 cut(s) | 53, 74, 470 |
| RsaNI | GTAC | 3 cut(s) | 52, 73, 469 |
| SacI | GAGCTC | 1 cut(s) | 546 |
| SaqAI | TTAA | 2 cut(s) | 531, 654 |
| SatI | GCNGC | 3 cut(s) | 15, 43, 238 |
| Sau3AI | GATC | 2 cut(s) | 487, 508 |
| Sau96I | GGNCC | 6 cut(s) | 56, 80, 358, 387, 440, 614 |
| ScaI | AGTACT | 1 cut(s) | 74 |
| SchI | GAGTC | 3 cut(s) | 104, 147, 279 |
| ScrFI | CCNGG | 4 cut(s) | 126, 341, 474, 693 |
| SduI | GDGCHC | 2 cut(s) | 310, 546 |
| SetI | ASST | 9 cut(s) | 111, 195, 342, 356, 445, 456, 485, 537, 546 |
| SfcI | CTRYAG | 2 cut(s) | 12, 159 |
| SinI | GGWCC | 5 cut(s) | 56, 80, 358, 440, 614 |
| SmlI | CTYRAG | 2 cut(s) | 530, 545 |
| SmoI | CTYRAG | 2 cut(s) | 530, 545 |
| Sse9I | AATT | 6 cut(s) | 119, 312, 381, 429, 618, 625 |
| SsiI | CCGC | 3 cut(s) | 302, 327, 477 |
| SspMI | CTAG | 2 cut(s) | 210, 332 |
| SstI | GAGCTC | 1 cut(s) | 546 |
| StyD4I | CCNGG | 4 cut(s) | 124, 339, 472, 691 |
| StyI | CCWWGG | 1 cut(s) | 47 |
| TaaI | ACNGT | 3 cut(s) | 56, 137, 188 |
| TasI | AATT | 6 cut(s) | 119, 312, 381, 429, 618, 625 |
| TatI | WGTACW | 1 cut(s) | 72 |
| TfiI | GAWTC | 1 cut(s) | 346 |
| Tru1I | TTAA | 2 cut(s) | 531, 654 |
| Tru9I | TTAA | 2 cut(s) | 531, 654 |
| TscAI | CASTG | 3 cut(s) | 151, 420, 610 |
| TseFI | GTSAC | 2 cut(s) | 454, 601 |
| TseI | GCWGC | 3 cut(s) | 14, 42, 237 |
| Tsp45I | GTSAC | 2 cut(s) | 454, 601 |
| TspGWI | ACGGA | 2 cut(s) | 282, 567 |
| TspRI | CASTG | 3 cut(s) | 151, 420, 610 |
| Tth111I | GACNNNGTC | 1 cut(s) | 65 |
| Vha464I | CTTAAG | 1 cut(s) | 530 |
| VpaK11BI | GGWCC | 5 cut(s) | 56, 80, 358, 440, 614 |
| XapI | RAATTY | 3 cut(s) | 119, 312, 625 |
| XbaI | TCTAGA | 1 cut(s) | 209 |
| XspI | CTAG | 2 cut(s) | 210, 332 |
| ZrmI | AGTACT | 1 cut(s) | 74 |