The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Chloroa_b-bind | PF00504 | 1 - 99 | 1.6e-18 | Chlorophyll A-B binding protein |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 107 |
| AccI | GTMKAC | 1 cut(s) | 156 |
| AciI | CCGC | 1 cut(s) | 174 |
| AclWI | GGATC | 1 cut(s) | 200 |
| AcoI | YGGCCR | 1 cut(s) | 258 |
| AcsI | RAATTY | 2 cut(s) | 32, 379 |
| AfaI | GTAC | 2 cut(s) | 167, 288 |
| AgsI | TTSAA | 1 cut(s) | 79 |
| AjnI | CCWGG | 2 cut(s) | 27, 36 |
| AluBI | AGCT | 7 cut(s) | 68, 89, 180, 226, 241, 293, 329 |
| AluI | AGCT | 7 cut(s) | 68, 89, 180, 226, 241, 293, 329 |
| Alw21I | GWGCWC | 4 cut(s) | 13, 91, 228, 243 |
| AlwI | GGATC | 1 cut(s) | 200 |
| Ama87I | CYCGRG | 1 cut(s) | 389 |
| AoxI | GGCC | 2 cut(s) | 137, 258 |
| ApoI | RAATTY | 2 cut(s) | 32, 379 |
| AspS9I | GGNCC | 2 cut(s) | 137, 311 |
| AsuC2I | CCSGG | 2 cut(s) | 390, 391 |
| AvaI | CYCGRG | 1 cut(s) | 389 |
| AvaII | GGWCC | 1 cut(s) | 311 |
| AxyI | CCTNAGG | 1 cut(s) | 210 |
| BalI | TGGCCA | 1 cut(s) | 260 |
| BanI | GGYRCC | 1 cut(s) | 107 |
| BanII | GRGCYC | 3 cut(s) | 91, 228, 243 |
| BbsI | GAAGAC | 1 cut(s) | 16 |
| Bbv12I | GWGCWC | 4 cut(s) | 13, 91, 228, 243 |
| BceAI | ACGGC | 1 cut(s) | 95 |
| BciT130I | CCWGG | 2 cut(s) | 29, 38 |
| BcnI | CCSGG | 2 cut(s) | 390, 391 |
| BfaI | CTAG | 4 cut(s) | 14, 171, 303, 326 |
| Bme1390I | CCNGG | 4 cut(s) | 29, 38, 390, 391 |
| Bme18I | GGWCC | 1 cut(s) | 311 |
| BmeT110I | CYCGRG | 1 cut(s) | 389 |
| BmgT120I | GGNCC | 2 cut(s) | 137, 311 |
| BmiI | GGNNCC | 1 cut(s) | 109 |
| BmrFI | CCNGG | 4 cut(s) | 29, 38, 390, 391 |
| BpiI | GAAGAC | 1 cut(s) | 16 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 126, 158 |
| BpmI | CTGGAG | 1 cut(s) | 105 |
| Bpu10I | CCTNAGC | 1 cut(s) | 234 |
| BpuEI | CTTGAG | 1 cut(s) | 212 |
| BpuMI | CCSGG | 2 cut(s) | 390, 391 |
| BsaJI | CCNNGG | 2 cut(s) | 111, 389 |
| Bse21I | CCTNAGG | 1 cut(s) | 210 |
| Bse3DI | GCAATG | 1 cut(s) | 52 |
| BseBI | CCWGG | 2 cut(s) | 29, 38 |
| BseDI | CCNNGG | 2 cut(s) | 111, 389 |
| BseMI | GCAATG | 1 cut(s) | 52 |
| BseMII | CTCAG | 2 cut(s) | 157, 201 |
| BshFI | GGCC | 2 cut(s) | 139, 260 |
| BshNI | GGYRCC | 1 cut(s) | 107 |
| BsiHKAI | GWGCWC | 4 cut(s) | 13, 91, 228, 243 |
| BsiHKCI | CYCGRG | 1 cut(s) | 389 |
| BsiSI | CCGG | 2 cut(s) | 132, 390 |
| BsnI | GGCC | 2 cut(s) | 139, 260 |
| BsoBI | CYCGRG | 1 cut(s) | 389 |
| Bsp1286I | GDGCHC | 4 cut(s) | 13, 91, 228, 243 |
| Bsp143I | GATC | 1 cut(s) | 205 |
| BspACI | CCGC | 1 cut(s) | 174 |
| BspANI | GGCC | 2 cut(s) | 139, 260 |
| BspCNI | CTCAG | 2 cut(s) | 156, 202 |
| BspLI | GGNNCC | 1 cut(s) | 109 |
| BspPI | GGATC | 1 cut(s) | 200 |
| BspT107I | GGYRCC | 1 cut(s) | 107 |
| BsrDI | GCAATG | 1 cut(s) | 52 |
| BssECI | CCNNGG | 2 cut(s) | 111, 389 |
| BssMI | GATC | 1 cut(s) | 205 |
| Bst2UI | CCWGG | 2 cut(s) | 29, 38 |
| Bst4CI | ACNGT | 1 cut(s) | 165 |
| BstC8I | GCNNGC | 1 cut(s) | 43 |
| BstDEI | CTNAG | 3 cut(s) | 143, 210, 234 |
| BstDSI | CCRYGG | 1 cut(s) | 111 |
| BstKTI | GATC | 1 cut(s) | 208 |
| BstMBI | GATC | 1 cut(s) | 205 |
| BstNI | CCWGG | 2 cut(s) | 29, 38 |
| BstSCI | CCNGG | 4 cut(s) | 27, 36, 388, 389 |
| BstV2I | GAAGAC | 1 cut(s) | 16 |
| Bsu36I | CCTNAGG | 1 cut(s) | 210 |
| BsuRI | GGCC | 2 cut(s) | 139, 260 |
| BtgI | CCRYGG | 1 cut(s) | 111 |
| BtsIMutI | CAGTG | 2 cut(s) | 106, 161 |
| Cac8I | GCNNGC | 1 cut(s) | 43 |
| Cfr13I | GGNCC | 2 cut(s) | 137, 311 |
| Cfr9I | CCCGGG | 1 cut(s) | 389 |
| CseI | GACGC | 1 cut(s) | 167 |
| Csp6I | GTAC | 2 cut(s) | 166, 287 |
| CviAII | CATG | 1 cut(s) | 262 |
| CviQI | GTAC | 2 cut(s) | 166, 287 |
| DdeI | CTNAG | 3 cut(s) | 143, 210, 234 |
| DpnI | GATC | 1 cut(s) | 207 |
| DpnII | GATC | 1 cut(s) | 205 |
| EaeI | YGGCCR | 1 cut(s) | 258 |
| Ecl136II | GAGCTC | 3 cut(s) | 89, 226, 241 |
| Eco24I | GRGCYC | 3 cut(s) | 91, 228, 243 |
| Eco47I | GGWCC | 1 cut(s) | 311 |
| Eco53kI | GAGCTC | 3 cut(s) | 89, 226, 241 |
| Eco81I | CCTNAGG | 1 cut(s) | 210 |
| Eco88I | CYCGRG | 1 cut(s) | 389 |
| EcoICRI | GAGCTC | 3 cut(s) | 89, 226, 241 |
| EcoO109I | RGGNCCY | 1 cut(s) | 137 |
| EcoRI | GAATTC | 1 cut(s) | 32 |
| EcoRII | CCWGG | 2 cut(s) | 27, 36 |
| EcoT38I | GRGCYC | 3 cut(s) | 91, 228, 243 |
| FaeI | CATG | 1 cut(s) | 265 |
| FaiI | YATR | 3 cut(s) | 263, 370, 372 |
| FatI | CATG | 1 cut(s) | 261 |
| FauI | CCCGC | 1 cut(s) | 167 |
| FauNDI | CATATG | 1 cut(s) | 370 |
| FblI | GTMKAC | 1 cut(s) | 156 |
| FriOI | GRGCYC | 3 cut(s) | 91, 228, 243 |
| FspBI | CTAG | 4 cut(s) | 14, 171, 303, 326 |
| GsuI | CTGGAG | 1 cut(s) | 105 |
| HaeIII | GGCC | 2 cut(s) | 139, 260 |
| HapII | CCGG | 2 cut(s) | 132, 390 |
| HgaI | GACGC | 1 cut(s) | 167 |
| Hin1II | CATG | 1 cut(s) | 265 |
| HincII | GTYRAC | 1 cut(s) | 352 |
| HindII | GTYRAC | 1 cut(s) | 352 |
| HinfI | GANTC | 1 cut(s) | 51 |
| HpaI | GTTAAC | 1 cut(s) | 352 |
| HpaII | CCGG | 2 cut(s) | 132, 390 |
| Hpy166II | GTNNAC | 2 cut(s) | 157, 352 |
| Hpy188I | TCNGA | 2 cut(s) | 62, 278 |
| Hpy188III | TCNNGA | 1 cut(s) | 209 |
| Hpy8I | GTNNAC | 2 cut(s) | 157, 352 |
| HpyAV | CCTTC | 1 cut(s) | 110 |
| HpyCH4III | ACNGT | 1 cut(s) | 165 |
| HpyF3I | CTNAG | 3 cut(s) | 143, 210, 234 |
| Hsp92II | CATG | 1 cut(s) | 265 |
| KspAI | GTTAAC | 1 cut(s) | 352 |
| Kzo9I | GATC | 1 cut(s) | 205 |
| LmnI | GCTCC | 3 cut(s) | 86, 177, 238 |
| LpnPI | CCDG | 8 cut(s) | 14, 23, 41, 50, 69, 130, 145, 222 |
| MaeI | CTAG | 4 cut(s) | 14, 171, 303, 326 |
| MaeIII | GTNAC | 1 cut(s) | 298 |
| MalI | GATC | 1 cut(s) | 207 |
| MboI | GATC | 1 cut(s) | 205 |
| MboII | GAAGA | 2 cut(s) | 16, 264 |
| MhlI | GDGCHC | 4 cut(s) | 13, 91, 228, 243 |
| MlsI | TGGCCA | 1 cut(s) | 260 |
| MluCI | AATT | 3 cut(s) | 32, 126, 379 |
| MluNI | TGGCCA | 1 cut(s) | 260 |
| MlyI | GAGTC | 1 cut(s) | 60 |
| MnlI | CCTC | 6 cut(s) | 97, 128, 142, 150, 205, 385 |
| Mox20I | TGGCCA | 1 cut(s) | 260 |
| MscI | TGGCCA | 1 cut(s) | 260 |
| MseI | TTAA | 2 cut(s) | 183, 351 |
| Msp20I | TGGCCA | 1 cut(s) | 260 |
| MspI | CCGG | 2 cut(s) | 132, 390 |
| MspR9I | CCNGG | 4 cut(s) | 29, 38, 390, 391 |
| MvaI | CCWGG | 2 cut(s) | 29, 38 |
| NciI | CCSGG | 2 cut(s) | 390, 391 |
| NdeI | CATATG | 1 cut(s) | 370 |
| NdeII | GATC | 1 cut(s) | 205 |
| NlaIII | CATG | 1 cut(s) | 265 |
| NlaIV | GGNNCC | 1 cut(s) | 109 |
| NmeAIII | GCCGAG | 1 cut(s) | 247 |
| PfoI | TCCNGGA | 1 cut(s) | 27 |
| PleI | GAGTC | 1 cut(s) | 59 |
| PpsI | GAGTC | 1 cut(s) | 59 |
| Psp124BI | GAGCTC | 3 cut(s) | 91, 228, 243 |
| Psp6I | CCWGG | 2 cut(s) | 27, 36 |
| PspGI | CCWGG | 2 cut(s) | 27, 36 |
| PspN4I | GGNNCC | 1 cut(s) | 109 |
| PspPI | GGNCC | 2 cut(s) | 137, 311 |
| RsaI | GTAC | 2 cut(s) | 167, 288 |
| RsaNI | GTAC | 2 cut(s) | 166, 287 |
| SacI | GAGCTC | 3 cut(s) | 91, 228, 243 |
| SaqAI | TTAA | 2 cut(s) | 183, 351 |
| Sau3AI | GATC | 1 cut(s) | 205 |
| Sau96I | GGNCC | 2 cut(s) | 137, 311 |
| SchI | GAGTC | 1 cut(s) | 60 |
| ScrFI | CCNGG | 4 cut(s) | 29, 38, 390, 391 |
| SduI | GDGCHC | 4 cut(s) | 13, 91, 228, 243 |
| SinI | GGWCC | 1 cut(s) | 311 |
| SmaI | CCCGGG | 1 cut(s) | 391 |
| SmlI | CTYRAG | 1 cut(s) | 227 |
| SmoI | CTYRAG | 1 cut(s) | 227 |
| Sse9I | AATT | 3 cut(s) | 32, 126, 379 |
| SsiI | CCGC | 1 cut(s) | 174 |
| SspI | AATATT | 1 cut(s) | 96 |
| SspMI | CTAG | 4 cut(s) | 14, 171, 303, 326 |
| SstI | GAGCTC | 3 cut(s) | 91, 228, 243 |
| StyD4I | CCNGG | 4 cut(s) | 27, 36, 388, 389 |
| TaaI | ACNGT | 1 cut(s) | 165 |
| TaqI | TCGA | 1 cut(s) | 269 |
| TaqII | GACCGA | 1 cut(s) | 328 |
| TasI | AATT | 3 cut(s) | 32, 126, 379 |
| Tru1I | TTAA | 2 cut(s) | 183, 351 |
| Tru9I | TTAA | 2 cut(s) | 183, 351 |
| TscAI | CASTG | 2 cut(s) | 106, 168 |
| TspGWI | ACGGA | 1 cut(s) | 264 |
| TspMI | CCCGGG | 1 cut(s) | 389 |
| TspRI | CASTG | 2 cut(s) | 106, 168 |
| VpaK11BI | GGWCC | 1 cut(s) | 311 |
| XapI | RAATTY | 2 cut(s) | 32, 379 |
| XmaI | CCCGGG | 1 cut(s) | 389 |
| XmiI | GTMKAC | 1 cut(s) | 156 |
| XspI | CTAG | 4 cut(s) | 14, 171, 303, 326 |