The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Chloroa_b-bind | PF00504 | 132 - 299 | 2.7e-50 | Chlorophyll A-B binding protein |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 233 |
| AciI | CCGC | 1 cut(s) | 724 |
| AclWI | GGATC | 4 cut(s) | 52, 87, 779, 938 |
| AcsI | RAATTY | 1 cut(s) | 416 |
| AcuI | CTGAAG | 1 cut(s) | 598 |
| AfaI | GTAC | 3 cut(s) | 350, 371, 767 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 233, 350, 386, 652 |
| AflII | CTTAAG | 1 cut(s) | 827 |
| AgeI | ACCGGT | 1 cut(s) | 410 |
| AgsI | TTSAA | 2 cut(s) | 494, 595 |
| AjnI | CCWGG | 5 cut(s) | 344, 557, 651, 690, 962 |
| AluBI | AGCT | 5 cut(s) | 275, 550, 605, 780, 826 |
| AluI | AGCT | 5 cut(s) | 275, 550, 605, 780, 826 |
| Alw21I | GWGCWC | 2 cut(s) | 552, 607 |
| Alw26I | GTCTC | 2 cut(s) | 180, 334 |
| AlwI | GGATC | 4 cut(s) | 52, 87, 779, 938 |
| Ama87I | CYCGRG | 1 cut(s) | 989 |
| AoxI | GGCC | 6 cut(s) | 240, 352, 625, 891, 910, 966 |
| ApaI | GGGCCC | 1 cut(s) | 914 |
| ApeKI | GCWGC | 1 cut(s) | 777 |
| ApoI | RAATTY | 1 cut(s) | 416 |
| AsiGI | ACCGGT | 1 cut(s) | 410 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 498 |
| AspS9I | GGNCC | 8 cut(s) | 89, 353, 377, 697, 737, 910, 911, 966 |
| AsuC2I | CCSGG | 5 cut(s) | 423, 545, 771, 990, 991 |
| AsuHPI | GGTGA | 6 cut(s) | 11, 401, 425, 437, 590, 758 |
| AvaI | CYCGRG | 1 cut(s) | 989 |
| AvaII | GGWCC | 4 cut(s) | 89, 377, 697, 737 |
| BaeGI | GKGCMC | 2 cut(s) | 914, 990 |
| BanII | GRGCYC | 4 cut(s) | 344, 552, 607, 914 |
| BbsI | GAAGAC | 2 cut(s) | 314, 859 |
| Bbv12I | GWGCWC | 2 cut(s) | 552, 607 |
| BbvI | GCAGC | 1 cut(s) | 789 |
| BccI | CCATC | 3 cut(s) | 118, 406, 504 |
| BceAI | ACGGC | 1 cut(s) | 367 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 455, 489, 908, 942 |
| BciT130I | CCWGG | 5 cut(s) | 346, 559, 653, 692, 964 |
| BciVI | GTATCC | 1 cut(s) | 433 |
| BcnI | CCSGG | 5 cut(s) | 423, 545, 771, 990, 991 |
| BcoDI | GTCTC | 2 cut(s) | 180, 334 |
| BfaI | CTAG | 1 cut(s) | 674 |
| BfrI | CTTAAG | 1 cut(s) | 827 |
| BfuI | GTATCC | 1 cut(s) | 433 |
| BisI | GCNGC | 1 cut(s) | 778 |
| BlsI | GCNGC | 1 cut(s) | 779 |
| Bme18I | GGWCC | 4 cut(s) | 89, 377, 697, 737 |
| BmeT110I | CYCGRG | 1 cut(s) | 989 |
| BmgT120I | GGNCC | 8 cut(s) | 89, 353, 377, 697, 737, 910, 911, 966 |
| BmiI | GGNNCC | 5 cut(s) | 91, 341, 396, 739, 912 |
| BmrI | ACTGGG | 1 cut(s) | 243 |
| BmsI | GCATC | 1 cut(s) | 161 |
| BmuI | ACTGGG | 1 cut(s) | 243 |
| BpiI | GAAGAC | 2 cut(s) | 314, 859 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 539, 571 |
| BpmI | CTGGAG | 1 cut(s) | 541 |
| BpuEI | CTTGAG | 2 cut(s) | 490, 827 |
| BpuMI | CCSGG | 5 cut(s) | 423, 545, 771, 990, 991 |
| BsaWI | WCCGGW | 2 cut(s) | 386, 410 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 233, 350, 386, 652 |
| Bse118I | RCCGGY | 1 cut(s) | 410 |
| Bse1I | ACTGG | 2 cut(s) | 238, 907 |
| Bse3DI | GCAATG | 2 cut(s) | 522, 726 |
| BseBI | CCWGG | 5 cut(s) | 346, 559, 653, 692, 964 |
| BseGI | GGATG | 2 cut(s) | 194, 221 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 233, 350, 386, 652 |
| BseMI | GCAATG | 2 cut(s) | 522, 726 |
| BseMII | CTCAG | 2 cut(s) | 193, 285 |
| BseNI | ACTGG | 2 cut(s) | 238, 907 |
| BseRI | GAGGAG | 2 cut(s) | 147, 542 |
| BseSI | GKGCMC | 2 cut(s) | 914, 990 |
| BseXI | GCAGC | 1 cut(s) | 789 |
| BseYI | CCCAGC | 1 cut(s) | 446 |
| BsgI | GTGCAG | 1 cut(s) | 908 |
| BshFI | GGCC | 6 cut(s) | 242, 354, 627, 893, 912, 968 |
| BshTI | ACCGGT | 1 cut(s) | 410 |
| BsiHKAI | GWGCWC | 2 cut(s) | 552, 607 |
| BsiHKCI | CYCGRG | 1 cut(s) | 989 |
| BsiSI | CCGG | 8 cut(s) | 387, 411, 423, 545, 600, 732, 771, 990 |
| BslFI | GGGAC | 1 cut(s) | 807 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 233, 350, 386, 652 |
| BsmAI | GTCTC | 2 cut(s) | 180, 334 |
| BsmFI | GGGAC | 1 cut(s) | 807 |
| BsmI | GAATGC | 1 cut(s) | 669 |
| BsnI | GGCC | 6 cut(s) | 242, 354, 627, 893, 912, 968 |
| BsoBI | CYCGRG | 1 cut(s) | 989 |
| Bsp120I | GGGCCC | 1 cut(s) | 910 |
| Bsp1286I | GDGCHC | 5 cut(s) | 344, 552, 607, 914, 990 |
| Bsp143I | GATC | 7 cut(s) | 44, 79, 358, 750, 784, 931, 943 |
| BspACI | CCGC | 1 cut(s) | 724 |
| BspANI | GGCC | 6 cut(s) | 242, 354, 627, 893, 912, 968 |
| BspCNI | CTCAG | 2 cut(s) | 192, 284 |
| BspLI | GGNNCC | 5 cut(s) | 91, 341, 396, 739, 912 |
| BspPI | GGATC | 4 cut(s) | 52, 87, 779, 938 |
| BspTI | CTTAAG | 1 cut(s) | 827 |
| BsrDI | GCAATG | 2 cut(s) | 522, 726 |
| BsrFI | RCCGGY | 1 cut(s) | 410 |
| BsrI | ACTGG | 2 cut(s) | 238, 907 |
| BssAI | RCCGGY | 1 cut(s) | 410 |
| BssMI | GATC | 7 cut(s) | 44, 79, 358, 750, 784, 931, 943 |
| BssT1I | CCWWGG | 3 cut(s) | 280, 637, 742 |
| Bst2UI | CCWGG | 5 cut(s) | 346, 559, 653, 692, 964 |
| Bst4CI | ACNGT | 2 cut(s) | 485, 765 |
| BstAFI | CTTAAG | 1 cut(s) | 827 |
| BstC8I | GCNNGC | 2 cut(s) | 324, 891 |
| BstDEI | CTNAG | 2 cut(s) | 179, 271 |
| BstEII | GGTNACC | 1 cut(s) | 719 |
| BstF5I | GGATG | 2 cut(s) | 194, 221 |
| BstKTI | GATC | 7 cut(s) | 47, 82, 361, 753, 787, 934, 946 |
| BstMAI | GTCTC | 2 cut(s) | 180, 334 |
| BstMBI | GATC | 7 cut(s) | 44, 79, 358, 750, 784, 931, 943 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 212, 624, 683 |
| BstNI | CCWGG | 5 cut(s) | 346, 559, 653, 692, 964 |
| BstPI | GGTNACC | 1 cut(s) | 719 |
| BstSLI | GKGCMC | 2 cut(s) | 914, 990 |
| BstV1I | GCAGC | 1 cut(s) | 789 |
| BstV2I | GAAGAC | 2 cut(s) | 314, 859 |
| BstX2I | RGATCY | 1 cut(s) | 79 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 287 |
| BstYI | RGATCY | 1 cut(s) | 79 |
| BsuI | GTATCC | 1 cut(s) | 433 |
| BsuRI | GGCC | 6 cut(s) | 242, 354, 627, 893, 912, 968 |
| BtsCI | GGATG | 2 cut(s) | 194, 221 |
| BtsI | GCAGTG | 1 cut(s) | 591 |
| BtsIMutI | CAGTG | 5 cut(s) | 231, 591, 753, 761, 900 |
| Cac8I | GCNNGC | 2 cut(s) | 324, 891 |
| Cfr10I | RCCGGY | 1 cut(s) | 410 |
| Cfr13I | GGNCC | 8 cut(s) | 89, 353, 377, 697, 737, 910, 911, 966 |
| Cfr9I | CCCGGG | 1 cut(s) | 989 |
| Csp6I | GTAC | 3 cut(s) | 349, 370, 766 |
| CspAI | ACCGGT | 1 cut(s) | 410 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 675, 710 |
| CviAII | CATG | 4 cut(s) | 57, 659, 703, 862 |
| CviQI | GTAC | 3 cut(s) | 349, 370, 766 |
| DdeI | CTNAG | 2 cut(s) | 179, 271 |
| DpnI | GATC | 7 cut(s) | 46, 81, 360, 752, 786, 933, 945 |
| DpnII | GATC | 7 cut(s) | 44, 79, 358, 750, 784, 931, 943 |
| Ecl136II | GAGCTC | 2 cut(s) | 550, 605 |
| Eco130I | CCWWGG | 3 cut(s) | 280, 637, 742 |
| Eco24I | GRGCYC | 4 cut(s) | 344, 552, 607, 914 |
| Eco47I | GGWCC | 4 cut(s) | 89, 377, 697, 737 |
| Eco53kI | GAGCTC | 2 cut(s) | 550, 605 |
| Eco57I | CTGAAG | 1 cut(s) | 598 |
| Eco88I | CYCGRG | 1 cut(s) | 989 |
| Eco91I | GGTNACC | 1 cut(s) | 719 |
| EcoICRI | GAGCTC | 2 cut(s) | 550, 605 |
| EcoO109I | RGGNCCY | 4 cut(s) | 89, 737, 910, 911 |
| EcoO65I | GGTNACC | 1 cut(s) | 719 |
| EcoRI | GAATTC | 1 cut(s) | 416 |
| EcoRII | CCWGG | 5 cut(s) | 344, 557, 651, 690, 962 |
| EcoT14I | CCWWGG | 3 cut(s) | 280, 637, 742 |
| EcoT38I | GRGCYC | 4 cut(s) | 344, 552, 607, 914 |
| ErhI | CCWWGG | 3 cut(s) | 280, 637, 742 |
| FaeI | CATG | 4 cut(s) | 60, 662, 706, 865 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 612, 644 |
| FaqI | GGGAC | 1 cut(s) | 807 |
| FatI | CATG | 4 cut(s) | 56, 658, 702, 861 |
| Fnu4HI | GCNGC | 1 cut(s) | 778 |
| FokI | GGATG | 2 cut(s) | 181, 208 |
| FriOI | GRGCYC | 4 cut(s) | 344, 552, 607, 914 |
| Fsp4HI | GCNGC | 1 cut(s) | 778 |
| FspBI | CTAG | 1 cut(s) | 674 |
| GluI | GCNGC | 1 cut(s) | 778 |
| GsaI | CCCAGC | 1 cut(s) | 450 |
| GsuI | CTGGAG | 1 cut(s) | 541 |
| HaeIII | GGCC | 6 cut(s) | 242, 354, 627, 893, 912, 968 |
| HapII | CCGG | 8 cut(s) | 387, 411, 423, 545, 600, 732, 771, 990 |
| Hin1II | CATG | 4 cut(s) | 60, 662, 706, 865 |
| HinfI | GANTC | 3 cut(s) | 61, 73, 567 |
| HpaII | CCGG | 8 cut(s) | 387, 411, 423, 545, 600, 732, 771, 990 |
| HphI | GGTGA | 6 cut(s) | 11, 401, 425, 437, 590, 758 |
| Hpy166II | GTNNAC | 1 cut(s) | 488 |
| Hpy188I | TCNGA | 1 cut(s) | 377 |
| Hpy188III | TCNNGA | 7 cut(s) | 36, 48, 65, 77, 507, 844, 919 |
| Hpy8I | GTNNAC | 1 cut(s) | 488 |
| HpyAV | CCTTC | 2 cut(s) | 232, 614 |
| HpyCH4III | ACNGT | 2 cut(s) | 485, 765 |
| HpyCH4V | TGCA | 5 cut(s) | 122, 662, 800, 821, 889 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 212, 624, 683 |
| HpyF3I | CTNAG | 2 cut(s) | 179, 271 |
| Hsp92II | CATG | 4 cut(s) | 60, 662, 706, 865 |
| Kzo9I | GATC | 7 cut(s) | 44, 79, 358, 750, 784, 931, 943 |
| LmnI | GCTCC | 5 cut(s) | 339, 400, 547, 555, 602 |
| Lsp1109I | GCAGC | 1 cut(s) | 789 |
| LweI | GCATC | 1 cut(s) | 161 |
| MaeI | CTAG | 1 cut(s) | 674 |
| MaeIII | GTNAC | 4 cut(s) | 425, 719, 898, 949 |
| MalI | GATC | 7 cut(s) | 46, 81, 360, 752, 786, 933, 945 |
| MboI | GATC | 7 cut(s) | 44, 79, 358, 750, 784, 931, 943 |
| MboII | GAAGA | 3 cut(s) | 319, 604, 864 |
| MflI | RGATCY | 1 cut(s) | 79 |
| MhlI | GDGCHC | 5 cut(s) | 344, 552, 607, 914, 990 |
| MluCI | AATT | 2 cut(s) | 141, 416 |
| MlyI | GAGTC | 1 cut(s) | 576 |
| MroXI | GAANNNNTTC | 1 cut(s) | 498 |
| MseI | TTAA | 3 cut(s) | 6, 252, 828 |
| MspA1I | CMGCKG | 1 cut(s) | 275 |
| MspCI | CTTAAG | 1 cut(s) | 827 |
| MspI | CCGG | 8 cut(s) | 387, 411, 423, 545, 600, 732, 771, 990 |
| Mva1269I | GAATGC | 1 cut(s) | 669 |
| MvaI | CCWGG | 5 cut(s) | 346, 559, 653, 692, 964 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 212, 624, 683 |
| NciI | CCSGG | 5 cut(s) | 423, 545, 771, 990, 991 |
| NdeII | GATC | 7 cut(s) | 44, 79, 358, 750, 784, 931, 943 |
| NlaIII | CATG | 4 cut(s) | 60, 662, 706, 865 |
| NlaIV | GGNNCC | 5 cut(s) | 91, 341, 396, 739, 912 |
| NmuCI | GTSAC | 2 cut(s) | 425, 898 |
| PctI | GAATGC | 1 cut(s) | 669 |
| PdmI | GAANNNNTTC | 1 cut(s) | 498 |
| PfeI | GAWTC | 2 cut(s) | 61, 73 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 233 |
| PfoI | TCCNGGA | 2 cut(s) | 543, 557 |
| PinAI | ACCGGT | 1 cut(s) | 410 |
| PkrI | GCNGC | 1 cut(s) | 779 |
| PleI | GAGTC | 1 cut(s) | 575 |
| PpsI | GAGTC | 1 cut(s) | 575 |
| PpuMI | RGGWCCY | 2 cut(s) | 89, 737 |
| Psp124BI | GAGCTC | 2 cut(s) | 552, 607 |
| Psp5II | RGGWCCY | 2 cut(s) | 89, 737 |
| Psp6I | CCWGG | 5 cut(s) | 344, 557, 651, 690, 962 |
| PspEI | GGTNACC | 1 cut(s) | 719 |
| PspFI | CCCAGC | 1 cut(s) | 446 |
| PspGI | CCWGG | 5 cut(s) | 344, 557, 651, 690, 962 |
| PspN4I | GGNNCC | 5 cut(s) | 91, 341, 396, 739, 912 |
| PspOMI | GGGCCC | 1 cut(s) | 910 |
| PspPI | GGNCC | 8 cut(s) | 89, 353, 377, 697, 737, 910, 911, 966 |
| PspPPI | RGGWCCY | 2 cut(s) | 89, 737 |
| PsuI | RGATCY | 1 cut(s) | 79 |
| PvuII | CAGCTG | 1 cut(s) | 275 |
| RsaI | GTAC | 3 cut(s) | 350, 371, 767 |
| RsaNI | GTAC | 3 cut(s) | 349, 370, 766 |
| SacI | GAGCTC | 2 cut(s) | 552, 607 |
| SaqAI | TTAA | 3 cut(s) | 6, 252, 828 |
| SatI | GCNGC | 1 cut(s) | 778 |
| Sau3AI | GATC | 7 cut(s) | 44, 79, 358, 750, 784, 931, 943 |
| Sau96I | GGNCC | 8 cut(s) | 89, 353, 377, 697, 737, 910, 911, 966 |
| SchI | GAGTC | 1 cut(s) | 576 |
| SduI | GDGCHC | 5 cut(s) | 344, 552, 607, 914, 990 |
| SfaNI | GCATC | 1 cut(s) | 161 |
| SinI | GGWCC | 4 cut(s) | 89, 377, 697, 737 |
| SmaI | CCCGGG | 1 cut(s) | 991 |
| SmlI | CTYRAG | 3 cut(s) | 505, 827, 842 |
| SmoI | CTYRAG | 3 cut(s) | 505, 827, 842 |
| Sse9I | AATT | 2 cut(s) | 141, 416 |
| SsiI | CCGC | 1 cut(s) | 724 |
| SspMI | CTAG | 1 cut(s) | 674 |
| SstI | GAGCTC | 2 cut(s) | 552, 607 |
| StyI | CCWWGG | 3 cut(s) | 280, 637, 742 |
| TaaI | ACNGT | 2 cut(s) | 485, 765 |
| TaqI | TCGA | 1 cut(s) | 918 |
| TasI | AATT | 2 cut(s) | 141, 416 |
| TfiI | GAWTC | 2 cut(s) | 61, 73 |
| Tru1I | TTAA | 3 cut(s) | 6, 252, 828 |
| Tru9I | TTAA | 3 cut(s) | 6, 252, 828 |
| TscAI | CASTG | 5 cut(s) | 238, 591, 760, 768, 907 |
| TseFI | GTSAC | 2 cut(s) | 425, 898 |
| TseI | GCWGC | 1 cut(s) | 777 |
| Tsp45I | GTSAC | 2 cut(s) | 425, 898 |
| TspDTI | ATGAA | 2 cut(s) | 135, 647 |
| TspGWI | ACGGA | 1 cut(s) | 579 |
| TspMI | CCCGGG | 1 cut(s) | 989 |
| TspRI | CASTG | 5 cut(s) | 238, 591, 760, 768, 907 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 233 |
| Vha464I | CTTAAG | 1 cut(s) | 827 |
| VpaK11BI | GGWCC | 4 cut(s) | 89, 377, 697, 737 |
| XapI | RAATTY | 1 cut(s) | 416 |
| XmaI | CCCGGG | 1 cut(s) | 989 |
| XmnI | GAANNNNTTC | 1 cut(s) | 498 |
| XspI | CTAG | 1 cut(s) | 674 |