MD17G1113400.v1.1

The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0000275
Physical Location & Seq
Reverse (-)
9725278 .. 9726436
1159 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1113400.v1.1.491

Sequence Viewer

Length: 798 bp
ATGGCAACCTCTGCTATCCAACGATCAGCATTTGCTGGCCAGACTGTTTTGAAGCAGTCGAATGAGCTCGTCCGGAAGATCGGCGGCCTTGGTGGCGGCCGCTTCTCCATGCGGCGCACAGTCAAAAGTGCTCCCCAGAGCATATGGTACGGCCCAGACCGGCCGAAGTACTTGGGACCGTTCTCCGAGCAAACTCCATCATACTTGACCGGTGAATTCCCCGGTGACTACGGATGGGACACTGCTGGACTATCTGCAGACCCCGAGACATTTGCCAAGAACCGTGAGCTTGAGGTGATCCACTCCAGATGGGCCATGCTTGGTGCACTGGGATGCGTCTTCCCAGAAATCTTGTCAAAGAATGGGGTCAAGTTCGGCGAGGCAGTTTGGTTCAAGGCTGGATCTCAAATCTTCTCCGAGGGCGGCCTTGACTACCTTGGCAACCCAAACCTTATCCATGCTCAGAGCATCTTGGCTATCTGGGCTGTCCAGGTTGTGCTCATGGGATTCATTGAGGGATACAGAGTTGGTGGAGGACCACTCGGTGAAGGACTTGACCCACTTTACCCAGGAGGTGCCTTTGATCCACTCGGACTTGCTGATGATCCTGAAGCTTTTGCTGAACTGAAGGTGAAGGAACTTAAGAACGGGCGTCTGGCTATGACCTCGATGTTTGGATTCTTTGTTCAGGCTATTGTCACAGGAAAGGGCCCAGTCGAGAACCTCTTTGACCACATTGCTGATCCAGTGGCCAACAACGCATGGGCTTTCGCCACCAACTTTGTCCCTGGAAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006091 GO:0006950 GO:0008150 GO:0008152 GO:0009266 GO:0009269 GO:0009314 GO:0009409 GO:0009414 GO:0009415 GO:0009416 GO:0009503 GO:0009507 GO:0009517 GO:0009521 GO:0009522 GO:0009523 GO:0009526 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009637 GO:0009639 GO:0009642 GO:0009644 GO:0009645 GO:0009719 GO:0009725 GO:0009737 GO:0009765 GO:0009768 GO:0009769 GO:0009889 GO:0009891 GO:0009893 GO:0009941 GO:0009987 GO:0010033 GO:0010035 GO:0010114 GO:0010119 GO:0010218 GO:0010287 GO:0015979 GO:0016020 GO:0016168 GO:0019222 GO:0019684 GO:0019904 GO:0030076 GO:0030104 GO:0031090 GO:0031323 GO:0031325 GO:0031409 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0032870 GO:0032991 GO:0033993 GO:0034357 GO:0042221 GO:0042592 GO:0042651 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044436 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046906 GO:0048037 GO:0048518 GO:0048522 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055035 GO:0065007 GO:0065008 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0090333 GO:0097159 GO:0097305 GO:0097306 GO:0098588 GO:0098796 GO:0098805 GO:0098807 GO:1901363 GO:1901700 GO:1901701 GO:1903426 GO:1903428 GO:2000377 GO:2000379
KEGG Pathways
Metabolic & Signaling
ko00196 ko01100 map00196 map01100
Pfam Domains
Protein Families
Chloroa_b-bind

Protein Analysis

266

Amino Acids

28.53

Weight (kDa)

5.69

Isoelectric Point (pI)

31.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Chloroa_b-bind PF00504 66 - 232 3.5e-51 Chlorophyll A-B binding protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000275)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G05070 AT2G05100 AT2G05100 AT3G27690 AT3G27690
fragaria_vesca FvH4_3g37660 FvH4_6g32440 FvH4_6g38383 FvH4_6g38390 FvH4_6g38450 FvH4_6g38460 FvH4_6g40970 FvH4_6g41000
malus_domestica MD09G1122500.v1.1 MD09G1292900.v1.1 MD17G1109600.v1.1 MD17G1113400.v1.1 MD17G1137800.v1.1 MD17G1281900.v1.1
prunus_persica Prupe.3G004100_v2.0.a1 Prupe.3G174600_v2.0.a1 Prupe.3G174700_v2.0.a1 Prupe.3G201000_v2.0.a1 Prupe.3G201000_v2.0.a1
pyrus_communis pycom09g04690
rosa_chinensis RchiOBHm_Chr2g0138781 RchiOBHm_Chr2g0140601 RchiOBHm_Chr2g0140621 RchiOBHm_Chr2g0140661 RchiOBHm_Chr2g0140671 RchiOBHm_Chr2g0151701 RchiOBHm_Chr2g0156601 RchiOBHm_Chr2g0156611 RchiOBHm_Chr2g0156621 RchiOBHm_Chr3g0486251 RchiOBHm_Chr5g0067271 RchiOBHm_Chr5g0067731 RchiOBHm_Chr5g0067781 RchiOBHm_Chr5g0067851 RchiOBHm_Chr5g0067871 RchiOBHm_Chr5g0067881
rosa_laevigata RLG00000019760 RLG00000019883 RLG00000019890 RLG00000020570 RLG00000020571 RLG00000020572 RLG00000020573 RLG00000020923 RLG00000020924 RLG00000020925 RLG00000023090 RLG00000035922 RLG00000035943
rosa_multiflora Rmu_co7992426.1_g000001 Rmu_co8294383.1_g000001 Rmu_sc0000015.1_g000011 Rmu_sc0000435.1_g000050 Rmu_sc0000435.1_g000051 Rmu_sc0001857.1_g000019 Rmu_sc0003342.1_g000007 Rmu_sc0005294.1_g000040 Rmu_sc0005294.1_g000041 Rmu_sc0007131.1_g000005 Rmu_sc0007661.1_g000008 Rmu_sc0009883.1_g000012 Rmu_sc0011512.1_g000011 Rmu_sc0011512.1_g000012 Rmu_sc0011512.1_g000013 Rmu_sc0012576.1_g000001 Rmu_sc0014881.1_g000003 Rmu_sc0014881.1_g000004 Rmu_sc0014881.1_g000005 Rmu_ssc0000213.1_g000119
rosa_roxburghii Rroxscaffold_1G00013870 Rroxscaffold_2G00092910 Rroxscaffold_2G00092920 Rroxscaffold_2G00096220 Rroxscaffold_2G00096230 Rroxscaffold_2G00105960 Rroxscaffold_6G00395950
rosa_rugosa Rorug02G0428200 Rorug02G0428300 Rorug02G0454600 Rorug02G0454700 Rorug03G0224200 Rorug05G0383400 Rorug05G0385900
rosa_samantha Rh2AG402400 Rh2AG415500 Rh2AG489100 Rh2AG489200 Rh2AG489300 Rh2AG489400 Rh2AG520200 Rh2AG520300 Rh2AG520500 Rh2BG405200 Rh2BG501700 Rh2BG501800 Rh2BG533300 Rh2BG533500 Rh2BG533600 Rh2DG422600 Rh2DG434900 Rh2DG435000 Rh2DG435100 Rh2DG512800 Rh2DG512900 Rh2DG542100 Rh2DG542300 Rh2DG542400 Rh3AG274200 Rh3BG309500 Rh3CG308700 Rh5AG442900 Rh5AG444700 Rh5BG460100 Rh5DG475000 Rh5DG476700
rosa_wichuraiana Rw0G022540 Rw2G032710 Rw2G034000 Rw2G040110 Rw2G042910 Rw2G042920 Rw2G042930 Rw3G024310 Rw5G041390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 575
AccIII TCCGGA 1 cut(s) 72
AciI CCGC 5 cut(s) 84, 96, 100, 112, 423
AclWI GGATC 5 cut(s) 292, 409, 578, 599, 737
AcoI YGGCCR 4 cut(s) 37, 97, 161, 750
AcsI RAATTY 1 cut(s) 215
AcuI CTGAAG 2 cut(s) 630, 647
AcyI GRCGYC 1 cut(s) 652
AdeI CACNNNGTG 1 cut(s) 545
AfaI GTAC 2 cut(s) 149, 170
AflII CTTAAG 1 cut(s) 641
AgeI ACCGGT 1 cut(s) 209
AgsI TTSAA 2 cut(s) 52, 394
AjnI CCWGG 3 cut(s) 489, 568, 787
AloI GAACNNNNNNTCC 2 cut(s) 669, 701
AluBI AGCT 3 cut(s) 67, 289, 614
AluI AGCT 3 cut(s) 67, 289, 614
Alw21I GWGCWC 4 cut(s) 69, 133, 328, 501
Alw26I GTCTC 1 cut(s) 260
Alw44I GTGCAC 1 cut(s) 324
AlwI GGATC 5 cut(s) 292, 409, 578, 599, 737
Ama87I CYCGRG 1 cut(s) 263
Aor13HI TCCGGA 1 cut(s) 72
AoxI GGCC 9 cut(s) 37, 85, 97, 151, 161, 312, 424, 709, 750
ApaI GGGCCC 1 cut(s) 713
ApaLI GTGCAC 1 cut(s) 324
ApoI RAATTY 1 cut(s) 215
AsiGI ACCGGT 1 cut(s) 209
AspLEI GCGC 1 cut(s) 117
AspS9I GGNCC 6 cut(s) 152, 176, 312, 536, 709, 710
AsuC2I CCSGG 1 cut(s) 222
AsuHPI GGTGA 5 cut(s) 224, 236, 307, 557, 643
AvaI CYCGRG 1 cut(s) 263
AvaII GGWCC 2 cut(s) 176, 536
BaeGI GKGCMC 2 cut(s) 328, 713
BalI TGGCCA 2 cut(s) 39, 752
BanI GGYRCC 1 cut(s) 575
BanII GRGCYC 2 cut(s) 69, 713
BbsI GAAGAC 1 cut(s) 331
Bbv12I GWGCWC 4 cut(s) 69, 133, 328, 501
BccI CCATC 3 cut(s) 205, 228, 303
BceAI ACGGC 1 cut(s) 166
BcgI CGANNNNNNTGC 2 cut(s) 254, 288
BciT130I CCWGG 3 cut(s) 491, 570, 789
BciVI GTATCC 1 cut(s) 512
BcnI CCSGG 1 cut(s) 222
BcoDI GTCTC 1 cut(s) 260
BfmI CTRYAG 1 cut(s) 255
BfrI CTTAAG 1 cut(s) 641
BfuI GTATCC 1 cut(s) 512
BglI GCCNNNNNGGC 1 cut(s) 93
BisI GCNGC 5 cut(s) 85, 97, 100, 113, 424
BlsI GCNGC 5 cut(s) 86, 98, 101, 114, 425
BmcAI AGTACT 1 cut(s) 170
Bme1390I CCNGG 4 cut(s) 222, 491, 570, 789
Bme18I GGWCC 2 cut(s) 176, 536
BmeT110I CYCGRG 1 cut(s) 263
BmgT120I GGNCC 6 cut(s) 152, 176, 312, 536, 709, 710
BmiI GGNNCC 3 cut(s) 177, 577, 711
BmrFI CCNGG 4 cut(s) 222, 491, 570, 789
BmrI ACTGGG 2 cut(s) 338, 707
BmsI GCATC 2 cut(s) 323, 477
BmuI ACTGGG 2 cut(s) 338, 707
BpiI GAAGAC 1 cut(s) 331
BplI GAGNNNNNCTC 2 cut(s) 525, 557
BpmI CTGGAG 1 cut(s) 289
BpuEI CTTGAG 1 cut(s) 311
BpuMI CCSGG 1 cut(s) 222
BsaHI GRCGYC 1 cut(s) 652
BsaJI CCNNGG 6 cut(s) 88, 220, 417, 436, 568, 787
BsaWI WCCGGW 2 cut(s) 72, 209
Bse118I RCCGGY 2 cut(s) 159, 209
Bse1I ACTGG 3 cut(s) 333, 713, 746
Bse3DI GCAATG 1 cut(s) 735
BseAI TCCGGA 1 cut(s) 72
BseBI CCWGG 3 cut(s) 491, 570, 789
BseDI CCNNGG 6 cut(s) 88, 220, 417, 436, 568, 787
BseGI GGATG 2 cut(s) 239, 338
BseMI GCAATG 1 cut(s) 735
BseMII CTCAG 1 cut(s) 476
BseNI ACTGG 3 cut(s) 333, 713, 746
BseSI GKGCMC 2 cut(s) 328, 713
BseX3I CGGCCG 2 cut(s) 97, 161
Bsh1285I CGRYCG 2 cut(s) 100, 164
BshFI GGCC 9 cut(s) 39, 87, 99, 153, 163, 314, 426, 711, 752
BshNI GGYRCC 1 cut(s) 575
BshTI ACCGGT 1 cut(s) 209
BsiEI CGRYCG 2 cut(s) 100, 164
BsiHKAI GWGCWC 4 cut(s) 69, 133, 328, 501
BsiHKCI CYCGRG 1 cut(s) 263
BsiSI CCGG 4 cut(s) 73, 160, 210, 222
BslFI GGGAC 3 cut(s) 189, 251, 770
BsmAI GTCTC 1 cut(s) 260
BsmFI GGGAC 3 cut(s) 189, 251, 770
BsnI GGCC 9 cut(s) 39, 87, 99, 153, 163, 314, 426, 711, 752
BsoBI CYCGRG 1 cut(s) 263
Bsp120I GGGCCC 1 cut(s) 709
Bsp1286I GDGCHC 5 cut(s) 69, 133, 328, 501, 713
Bsp13I TCCGGA 1 cut(s) 72
Bsp143I GATC 7 cut(s) 23, 78, 297, 401, 583, 604, 742
BspACI CCGC 5 cut(s) 84, 96, 100, 112, 423
BspANI GGCC 9 cut(s) 39, 87, 99, 153, 163, 314, 426, 711, 752
BspCNI CTCAG 1 cut(s) 475
BspEI TCCGGA 1 cut(s) 72
BspLI GGNNCC 3 cut(s) 177, 577, 711
BspMAI CTGCAG 1 cut(s) 259
BspPI GGATC 5 cut(s) 292, 409, 578, 599, 737
BspT107I GGYRCC 1 cut(s) 575
BspTI CTTAAG 1 cut(s) 641
BsrDI GCAATG 1 cut(s) 735
BsrFI RCCGGY 2 cut(s) 159, 209
BsrI ACTGG 3 cut(s) 333, 713, 746
BssAI RCCGGY 2 cut(s) 159, 209
BssECI CCNNGG 6 cut(s) 88, 220, 417, 436, 568, 787
BssMI GATC 7 cut(s) 23, 78, 297, 401, 583, 604, 742
BssNI GRCGYC 1 cut(s) 652
BssT1I CCWWGG 2 cut(s) 88, 436
Bst2UI CCWGG 3 cut(s) 491, 570, 789
Bst4CI ACNGT 4 cut(s) 46, 121, 180, 284
BstACI GRCGYC 1 cut(s) 652
BstAFI CTTAAG 1 cut(s) 641
BstAPI GCANNNNNTGC 1 cut(s) 11
BstC8I GCNNGC 1 cut(s) 37
BstDEI CTNAG 1 cut(s) 462
BstF5I GGATG 2 cut(s) 239, 338
BstHHI GCGC 1 cut(s) 117
BstKTI GATC 7 cut(s) 26, 81, 300, 404, 586, 607, 745
BstMAI GTCTC 1 cut(s) 260
BstMBI GATC 7 cut(s) 23, 78, 297, 401, 583, 604, 742
BstMCI CGRYCG 2 cut(s) 100, 164
BstMWI GCNNNNNNNGC 4 cut(s) 11, 93, 482, 758
BstNI CCWGG 3 cut(s) 491, 570, 789
BstSCI CCNGG 4 cut(s) 220, 489, 568, 787
BstSFI CTRYAG 1 cut(s) 255
BstSLI GKGCMC 2 cut(s) 328, 713
BstV2I GAAGAC 1 cut(s) 331
BstX2I RGATCY 1 cut(s) 401
BstYI RGATCY 1 cut(s) 401
BstZI CGGCCG 2 cut(s) 97, 161
BsuI GTATCC 1 cut(s) 512
BsuRI GGCC 9 cut(s) 39, 87, 99, 153, 163, 314, 426, 711, 752
BtsCI GGATG 2 cut(s) 239, 338
BtsI GCAGTG 1 cut(s) 240
BtsIMutI CAGTG 3 cut(s) 240, 326, 753
Cac8I GCNNGC 1 cut(s) 37
CciNI GCGGCCGC 1 cut(s) 97
CfoI GCGC 1 cut(s) 117
Cfr10I RCCGGY 2 cut(s) 159, 209
Cfr13I GGNCC 6 cut(s) 152, 176, 312, 536, 709, 710
CseI GACGC 2 cut(s) 325, 641
Csp6I GTAC 2 cut(s) 148, 169
CspAI ACCGGT 1 cut(s) 209
CspCI CAANNNNNGTGG 2 cut(s) 763, 798
CviAII CATG 5 cut(s) 109, 316, 458, 502, 762
CviQI GTAC 2 cut(s) 148, 169
DdeI CTNAG 1 cut(s) 462
DpnI GATC 7 cut(s) 25, 80, 299, 403, 585, 606, 744
DpnII GATC 7 cut(s) 23, 78, 297, 401, 583, 604, 742
DraIII CACNNNGTG 1 cut(s) 545
EaeI YGGCCR 4 cut(s) 37, 97, 161, 750
EagI CGGCCG 2 cut(s) 97, 161
Ecl136II GAGCTC 1 cut(s) 67
EclXI CGGCCG 2 cut(s) 97, 161
Eco130I CCWWGG 2 cut(s) 88, 436
Eco24I GRGCYC 2 cut(s) 69, 713
Eco47I GGWCC 2 cut(s) 176, 536
Eco52I CGGCCG 2 cut(s) 97, 161
Eco53kI GAGCTC 1 cut(s) 67
Eco57I CTGAAG 2 cut(s) 630, 647
Eco88I CYCGRG 1 cut(s) 263
EcoICRI GAGCTC 1 cut(s) 67
EcoO109I RGGNCCY 1 cut(s) 709
EcoRI GAATTC 1 cut(s) 215
EcoRII CCWGG 3 cut(s) 489, 568, 787
EcoT14I CCWWGG 2 cut(s) 88, 436
EcoT38I GRGCYC 2 cut(s) 69, 713
ErhI CCWWGG 2 cut(s) 88, 436
FaeI CATG 5 cut(s) 112, 319, 461, 505, 765
FaiI YATR 9 cut(s) 110, 143, 145, 202, 317, 459, 503, 662, 763
FaqI GGGAC 3 cut(s) 189, 251, 770
FatI CATG 5 cut(s) 108, 315, 457, 501, 761
FauNDI CATATG 1 cut(s) 143
Fnu4HI GCNGC 5 cut(s) 85, 97, 100, 113, 424
FokI GGATG 2 cut(s) 246, 345
FriOI GRGCYC 2 cut(s) 69, 713
Fsp4HI GCNGC 5 cut(s) 85, 97, 100, 113, 424
GlaI GCGC 1 cut(s) 116
GluI GCNGC 5 cut(s) 85, 97, 100, 113, 424
GsuI CTGGAG 1 cut(s) 289
HaeIII GGCC 9 cut(s) 39, 87, 99, 153, 163, 314, 426, 711, 752
HapII CCGG 4 cut(s) 73, 160, 210, 222
HgaI GACGC 2 cut(s) 325, 641
HhaI GCGC 1 cut(s) 117
Hin1I GRCGYC 1 cut(s) 652
Hin1II CATG 5 cut(s) 112, 319, 461, 505, 765
Hin6I GCGC 1 cut(s) 115
HinP1I GCGC 1 cut(s) 115
HindIII AAGCTT 1 cut(s) 612
HinfI GANTC 2 cut(s) 507, 678
HpaII CCGG 4 cut(s) 73, 160, 210, 222
HphI GGTGA 5 cut(s) 224, 236, 307, 557, 643
Hpy166II GTNNAC 1 cut(s) 326
Hpy188I TCNGA 4 cut(s) 187, 418, 465, 593
Hpy188III TCNNGA 4 cut(s) 73, 306, 608, 718
Hpy8I GTNNAC 1 cut(s) 326
HpyAV CCTTC 3 cut(s) 542, 622, 628
HpyCH4III ACNGT 4 cut(s) 46, 121, 180, 284
HpyCH4V TGCA 2 cut(s) 257, 326
HpyF10VI GCNNNNNNNGC 4 cut(s) 11, 93, 482, 758
HpyF3I CTNAG 1 cut(s) 462
Hsp92I GRCGYC 1 cut(s) 652
Hsp92II CATG 5 cut(s) 112, 319, 461, 505, 765
HspAI GCGC 1 cut(s) 115
Kpn2I TCCGGA 1 cut(s) 72
Kzo9I GATC 7 cut(s) 23, 78, 297, 401, 583, 604, 742
LmnI GCTCC 1 cut(s) 136
LweI GCATC 2 cut(s) 323, 477
MaeIII GTNAC 2 cut(s) 224, 697
MalI GATC 7 cut(s) 25, 80, 299, 403, 585, 606, 744
MboI GATC 7 cut(s) 23, 78, 297, 401, 583, 604, 742
MboII GAAGA 3 cut(s) 88, 331, 403
MflI RGATCY 1 cut(s) 401
MhlI GDGCHC 5 cut(s) 69, 133, 328, 501, 713
MlsI TGGCCA 2 cut(s) 39, 752
MluCI AATT 1 cut(s) 215
MluNI TGGCCA 2 cut(s) 39, 752
MmeI TCCRAC 1 cut(s) 43
MnlI CCTC 9 cut(s) 19, 286, 373, 412, 508, 527, 566, 676, 734
Mox20I TGGCCA 2 cut(s) 39, 752
MroI TCCGGA 1 cut(s) 72
MscI TGGCCA 2 cut(s) 39, 752
MseI TTAA 1 cut(s) 642
MslI CAYNNNNRTG 1 cut(s) 331
Msp20I TGGCCA 2 cut(s) 39, 752
MspCI CTTAAG 1 cut(s) 641
MspI CCGG 4 cut(s) 73, 160, 210, 222
MspR9I CCNGG 4 cut(s) 222, 491, 570, 789
MvaI CCWGG 3 cut(s) 491, 570, 789
MwoI GCNNNNNNNGC 4 cut(s) 11, 93, 482, 758
NciI CCSGG 1 cut(s) 222
NdeI CATATG 1 cut(s) 143
NdeII GATC 7 cut(s) 23, 78, 297, 401, 583, 604, 742
NlaIII CATG 5 cut(s) 112, 319, 461, 505, 765
NlaIV GGNNCC 3 cut(s) 177, 577, 711
NmuCI GTSAC 2 cut(s) 224, 697
NotI GCGGCCGC 1 cut(s) 97
PfeI GAWTC 2 cut(s) 507, 678
PinAI ACCGGT 1 cut(s) 209
PkrI GCNGC 5 cut(s) 86, 98, 101, 114, 425
Psp124BI GAGCTC 1 cut(s) 69
Psp6I CCWGG 3 cut(s) 489, 568, 787
PspGI CCWGG 3 cut(s) 489, 568, 787
PspN4I GGNNCC 3 cut(s) 177, 577, 711
PspOMI GGGCCC 1 cut(s) 709
PspPI GGNCC 6 cut(s) 152, 176, 312, 536, 709, 710
PstI CTGCAG 1 cut(s) 259
PsuI RGATCY 1 cut(s) 401
RsaI GTAC 2 cut(s) 149, 170
RsaNI GTAC 2 cut(s) 148, 169
RseI CAYNNNNRTG 1 cut(s) 331
SacI GAGCTC 1 cut(s) 69
SaqAI TTAA 1 cut(s) 642
SatI GCNGC 5 cut(s) 85, 97, 100, 113, 424
Sau3AI GATC 7 cut(s) 23, 78, 297, 401, 583, 604, 742
Sau96I GGNCC 6 cut(s) 152, 176, 312, 536, 709, 710
ScaI AGTACT 1 cut(s) 170
ScrFI CCNGG 4 cut(s) 222, 491, 570, 789
SduI GDGCHC 5 cut(s) 69, 133, 328, 501, 713
SfaNI GCATC 2 cut(s) 323, 477
SfcI CTRYAG 1 cut(s) 255
SinI GGWCC 2 cut(s) 176, 536
SmiMI CAYNNNNRTG 1 cut(s) 331
SmlI CTYRAG 2 cut(s) 290, 641
SmoI CTYRAG 2 cut(s) 290, 641
Sse9I AATT 1 cut(s) 215
SsiI CCGC 5 cut(s) 84, 96, 100, 112, 423
SstI GAGCTC 1 cut(s) 69
StyD4I CCNGG 4 cut(s) 220, 489, 568, 787
StyI CCWWGG 2 cut(s) 88, 436
TaaI ACNGT 4 cut(s) 46, 121, 180, 284
TaqI TCGA 3 cut(s) 59, 668, 717
TasI AATT 1 cut(s) 215
TatI WGTACW 1 cut(s) 168
TauI GCSGC 5 cut(s) 87, 99, 102, 115, 426
TfiI GAWTC 2 cut(s) 507, 678
Tru1I TTAA 1 cut(s) 642
Tru9I TTAA 1 cut(s) 642
TscAI CASTG 3 cut(s) 247, 333, 753
TseFI GTSAC 2 cut(s) 224, 697
Tsp45I GTSAC 2 cut(s) 224, 697
TspDTI ATGAA 1 cut(s) 499
TspGWI ACGGA 1 cut(s) 246
TspRI CASTG 3 cut(s) 247, 333, 753
Vha464I CTTAAG 1 cut(s) 641
VneI GTGCAC 1 cut(s) 324
VpaK11BI GGWCC 2 cut(s) 176, 536
XapI RAATTY 1 cut(s) 215
ZrmI AGTACT 1 cut(s) 170
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.