The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Chloroa_b-bind | PF00504 | 67 - 234 | 1.5e-50 | Chlorophyll A-B binding protein |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 107 |
| AccB1I | GGYRCC | 1 cut(s) | 329 |
| AccI | GTMKAC | 1 cut(s) | 561 |
| AciI | CCGC | 1 cut(s) | 114 |
| AclWI | GGATC | 2 cut(s) | 260, 605 |
| AcoI | YGGCCR | 1 cut(s) | 43 |
| AcuI | CTGAAG | 1 cut(s) | 403 |
| AfaI | GTAC | 3 cut(s) | 155, 176, 572 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 88, 155, 191, 457 |
| AflII | CTTAAG | 1 cut(s) | 632 |
| AgsI | TTSAA | 3 cut(s) | 12, 400, 521 |
| Alw21I | GWGCWC | 3 cut(s) | 297, 412, 648 |
| Alw26I | GTCTC | 1 cut(s) | 266 |
| AlwI | GGATC | 2 cut(s) | 260, 605 |
| AoxI | GGCC | 3 cut(s) | 43, 91, 318 |
| ApeKI | GCWGC | 1 cut(s) | 116 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 119, 151 |
| AspLEI | GCGC | 1 cut(s) | 108 |
| AspS9I | GGNCC | 7 cut(s) | 91, 158, 182, 318, 460, 542, 716 |
| AsuC2I | CCSGG | 3 cut(s) | 228, 576, 795 |
| AsuHPI | GGTGA | 5 cut(s) | 98, 205, 242, 563, 649 |
| AvaII | GGWCC | 5 cut(s) | 158, 182, 460, 542, 716 |
| AxyI | CCTNAGG | 1 cut(s) | 615 |
| BaeGI | GKGCMC | 1 cut(s) | 334 |
| BalI | TGGCCA | 1 cut(s) | 45 |
| BanI | GGYRCC | 1 cut(s) | 329 |
| BanII | GRGCYC | 4 cut(s) | 258, 297, 412, 648 |
| BbsI | GAAGAC | 1 cut(s) | 664 |
| Bbv12I | GWGCWC | 3 cut(s) | 297, 412, 648 |
| BbvI | GCAGC | 1 cut(s) | 128 |
| BccI | CCATC | 2 cut(s) | 309, 502 |
| BceAI | ACGGC | 1 cut(s) | 253 |
| BclI | TGATCA | 1 cut(s) | 736 |
| BcnI | CCSGG | 3 cut(s) | 228, 576, 795 |
| BcoDI | GTCTC | 1 cut(s) | 266 |
| BfaI | CTAG | 5 cut(s) | 38, 326, 434, 453, 731 |
| BfmI | CTRYAG | 1 cut(s) | 526 |
| BfrI | CTTAAG | 1 cut(s) | 632 |
| BisI | GCNGC | 1 cut(s) | 117 |
| BlpI | GCTNAGC | 1 cut(s) | 627 |
| BlsI | GCNGC | 1 cut(s) | 118 |
| BmcAI | AGTACT | 1 cut(s) | 176 |
| Bme1390I | CCNGG | 3 cut(s) | 228, 576, 795 |
| Bme18I | GGWCC | 5 cut(s) | 158, 182, 460, 542, 716 |
| BmgT120I | GGNCC | 7 cut(s) | 91, 158, 182, 318, 460, 542, 716 |
| BmiI | GGNNCC | 4 cut(s) | 64, 183, 331, 717 |
| BmrFI | CCNGG | 3 cut(s) | 228, 576, 795 |
| BpiI | GAAGAC | 1 cut(s) | 664 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 531, 563 |
| BpmI | CTGGAG | 1 cut(s) | 426 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 627 |
| BpuEI | CTTGAG | 1 cut(s) | 632 |
| BpuMI | CCSGG | 3 cut(s) | 228, 576, 795 |
| BsaI | GGTCTC | 1 cut(s) | 266 |
| BsaJI | CCNNGG | 4 cut(s) | 82, 149, 334, 574 |
| BsaWI | WCCGGW | 2 cut(s) | 215, 707 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 88, 155, 191, 457 |
| Bse1I | ACTGG | 1 cut(s) | 666 |
| Bse21I | CCTNAGG | 1 cut(s) | 615 |
| BseDI | CCNNGG | 4 cut(s) | 82, 149, 334, 574 |
| BseGI | GGATG | 2 cut(s) | 137, 303 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 88, 155, 191, 457 |
| BseMII | CTCAG | 4 cut(s) | 261, 273, 606, 618 |
| BseNI | ACTGG | 1 cut(s) | 666 |
| BseRI | GAGGAG | 2 cut(s) | 16, 71 |
| BseSI | GKGCMC | 1 cut(s) | 334 |
| BseXI | GCAGC | 1 cut(s) | 128 |
| BseYI | CCCAGC | 2 cut(s) | 240, 251 |
| BshFI | GGCC | 3 cut(s) | 45, 93, 320 |
| BshNI | GGYRCC | 1 cut(s) | 329 |
| BsiHKAI | GWGCWC | 3 cut(s) | 297, 412, 648 |
| BsiSI | CCGG | 6 cut(s) | 192, 216, 228, 576, 708, 795 |
| BslFI | GGGAC | 3 cut(s) | 195, 257, 729 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 88, 155, 191, 457 |
| BsmAI | GTCTC | 1 cut(s) | 266 |
| BsmFI | GGGAC | 3 cut(s) | 195, 257, 729 |
| BsnI | GGCC | 3 cut(s) | 45, 93, 320 |
| Bso31I | GGTCTC | 1 cut(s) | 266 |
| Bsp1286I | GDGCHC | 5 cut(s) | 258, 297, 334, 412, 648 |
| Bsp143I | GATC | 4 cut(s) | 265, 501, 610, 736 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 627 |
| BspACI | CCGC | 1 cut(s) | 114 |
| BspANI | GGCC | 3 cut(s) | 45, 93, 320 |
| BspCNI | CTCAG | 4 cut(s) | 262, 272, 607, 619 |
| BspLI | GGNNCC | 4 cut(s) | 64, 183, 331, 717 |
| BspPI | GGATC | 2 cut(s) | 260, 605 |
| BspT107I | GGYRCC | 1 cut(s) | 329 |
| BspTI | CTTAAG | 1 cut(s) | 632 |
| BspTNI | GGTCTC | 1 cut(s) | 266 |
| BsrI | ACTGG | 1 cut(s) | 666 |
| BssECI | CCNNGG | 4 cut(s) | 82, 149, 334, 574 |
| BssMI | GATC | 4 cut(s) | 265, 501, 610, 736 |
| BssT1I | CCWWGG | 1 cut(s) | 334 |
| Bst4CI | ACNGT | 3 cut(s) | 158, 167, 290 |
| BstAFI | CTTAAG | 1 cut(s) | 632 |
| BstC8I | GCNNGC | 3 cut(s) | 43, 603, 696 |
| BstDEI | CTNAG | 4 cut(s) | 259, 270, 615, 627 |
| BstDSI | CCRYGG | 1 cut(s) | 149 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 86 |
| BstF5I | GGATG | 2 cut(s) | 137, 303 |
| BstHHI | GCGC | 1 cut(s) | 108 |
| BstKTI | GATC | 4 cut(s) | 268, 504, 613, 739 |
| BstMAI | GTCTC | 1 cut(s) | 266 |
| BstMBI | GATC | 4 cut(s) | 265, 501, 610, 736 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 47, 488 |
| BstSCI | CCNGG | 3 cut(s) | 226, 574, 793 |
| BstSFI | CTRYAG | 1 cut(s) | 526 |
| BstSLI | GKGCMC | 1 cut(s) | 334 |
| BstV1I | GCAGC | 1 cut(s) | 128 |
| BstV2I | GAAGAC | 1 cut(s) | 664 |
| Bsu36I | CCTNAGG | 1 cut(s) | 615 |
| BsuRI | GGCC | 3 cut(s) | 45, 93, 320 |
| BtgI | CCRYGG | 1 cut(s) | 149 |
| BtsCI | GGATG | 2 cut(s) | 137, 303 |
| BtsIMutI | CAGTG | 1 cut(s) | 427 |
| Cac8I | GCNNGC | 3 cut(s) | 43, 603, 696 |
| CfoI | GCGC | 1 cut(s) | 108 |
| Cfr13I | GGNCC | 7 cut(s) | 91, 158, 182, 318, 460, 542, 716 |
| Csp6I | GTAC | 3 cut(s) | 154, 175, 571 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 769, 804 |
| CviAII | CATG | 3 cut(s) | 103, 322, 676 |
| CviQI | GTAC | 3 cut(s) | 154, 175, 571 |
| DdeI | CTNAG | 4 cut(s) | 259, 270, 615, 627 |
| DpnI | GATC | 4 cut(s) | 267, 503, 612, 738 |
| DpnII | GATC | 4 cut(s) | 265, 501, 610, 736 |
| EaeI | YGGCCR | 1 cut(s) | 43 |
| Ecl136II | GAGCTC | 3 cut(s) | 295, 410, 646 |
| Eco130I | CCWWGG | 1 cut(s) | 334 |
| Eco24I | GRGCYC | 4 cut(s) | 258, 297, 412, 648 |
| Eco31I | GGTCTC | 1 cut(s) | 266 |
| Eco47I | GGWCC | 5 cut(s) | 158, 182, 460, 542, 716 |
| Eco53kI | GAGCTC | 3 cut(s) | 295, 410, 646 |
| Eco57I | CTGAAG | 1 cut(s) | 403 |
| Eco81I | CCTNAGG | 1 cut(s) | 615 |
| EcoICRI | GAGCTC | 3 cut(s) | 295, 410, 646 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 86 |
| EcoO109I | RGGNCCY | 1 cut(s) | 542 |
| EcoT14I | CCWWGG | 1 cut(s) | 334 |
| EcoT38I | GRGCYC | 4 cut(s) | 258, 297, 412, 648 |
| ErhI | CCWWGG | 1 cut(s) | 334 |
| FaeI | CATG | 3 cut(s) | 106, 325, 679 |
| FaiI | YATR | 6 cut(s) | 104, 323, 668, 677, 775, 777 |
| FaqI | GGGAC | 3 cut(s) | 195, 257, 729 |
| FatI | CATG | 3 cut(s) | 102, 321, 675 |
| FauNDI | CATATG | 1 cut(s) | 775 |
| FbaI | TGATCA | 1 cut(s) | 736 |
| FblI | GTMKAC | 1 cut(s) | 561 |
| Fnu4HI | GCNGC | 1 cut(s) | 117 |
| FokI | GGATG | 2 cut(s) | 124, 290 |
| FriOI | GRGCYC | 4 cut(s) | 258, 297, 412, 648 |
| Fsp4HI | GCNGC | 1 cut(s) | 117 |
| FspBI | CTAG | 5 cut(s) | 38, 326, 434, 453, 731 |
| FspI | TGCGCA | 1 cut(s) | 107 |
| GlaI | GCGC | 1 cut(s) | 107 |
| GluI | GCNGC | 1 cut(s) | 117 |
| GsaI | CCCAGC | 2 cut(s) | 244, 255 |
| GsuI | CTGGAG | 1 cut(s) | 426 |
| HaeIII | GGCC | 3 cut(s) | 45, 93, 320 |
| HapII | CCGG | 6 cut(s) | 192, 216, 228, 576, 708, 795 |
| HhaI | GCGC | 1 cut(s) | 108 |
| Hin1II | CATG | 3 cut(s) | 106, 325, 679 |
| Hin6I | GCGC | 1 cut(s) | 106 |
| HinP1I | GCGC | 1 cut(s) | 106 |
| HincII | GTYRAC | 1 cut(s) | 757 |
| HindII | GTYRAC | 1 cut(s) | 757 |
| HindIII | AAGCTT | 1 cut(s) | 56 |
| HinfI | GANTC | 2 cut(s) | 372, 684 |
| HpaI | GTTAAC | 1 cut(s) | 757 |
| HpaII | CCGG | 6 cut(s) | 192, 216, 228, 576, 708, 795 |
| HphI | GGTGA | 5 cut(s) | 98, 205, 242, 563, 649 |
| Hpy166II | GTNNAC | 4 cut(s) | 431, 463, 562, 757 |
| Hpy188I | TCNGA | 1 cut(s) | 683 |
| Hpy188III | TCNNGA | 6 cut(s) | 161, 269, 312, 505, 614, 649 |
| Hpy8I | GTNNAC | 4 cut(s) | 431, 463, 562, 757 |
| HpyAV | CCTTC | 3 cut(s) | 42, 515, 634 |
| HpyCH4III | ACNGT | 3 cut(s) | 158, 167, 290 |
| HpyCH4V | TGCA | 3 cut(s) | 536, 605, 694 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 47, 488 |
| HpyF3I | CTNAG | 4 cut(s) | 259, 270, 615, 627 |
| Hsp92II | CATG | 3 cut(s) | 106, 325, 679 |
| HspAI | GCGC | 1 cut(s) | 106 |
| Ksp22I | TGATCA | 1 cut(s) | 736 |
| KspAI | GTTAAC | 1 cut(s) | 757 |
| Kzo9I | GATC | 4 cut(s) | 265, 501, 610, 736 |
| LmnI | GCTCC | 3 cut(s) | 407, 582, 643 |
| Lsp1109I | GCAGC | 1 cut(s) | 128 |
| MaeI | CTAG | 5 cut(s) | 38, 326, 434, 453, 731 |
| MaeIII | GTNAC | 3 cut(s) | 97, 230, 703 |
| MalI | GATC | 4 cut(s) | 267, 503, 612, 738 |
| MboI | GATC | 4 cut(s) | 265, 501, 610, 736 |
| MboII | GAAGA | 3 cut(s) | 409, 669, 679 |
| MhlI | GDGCHC | 5 cut(s) | 258, 297, 334, 412, 648 |
| MlsI | TGGCCA | 1 cut(s) | 45 |
| MluCI | AATT | 1 cut(s) | 531 |
| MluNI | TGGCCA | 1 cut(s) | 45 |
| MlyI | GAGTC | 1 cut(s) | 381 |
| Mox20I | TGGCCA | 1 cut(s) | 45 |
| MscI | TGGCCA | 1 cut(s) | 45 |
| MseI | TTAA | 2 cut(s) | 633, 756 |
| Msp20I | TGGCCA | 1 cut(s) | 45 |
| MspA1I | CMGCKG | 2 cut(s) | 251, 263 |
| MspCI | CTTAAG | 1 cut(s) | 632 |
| MspI | CCGG | 6 cut(s) | 192, 216, 228, 576, 708, 795 |
| MspR9I | CCNGG | 3 cut(s) | 228, 576, 795 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 47, 488 |
| NciI | CCSGG | 3 cut(s) | 228, 576, 795 |
| NdeI | CATATG | 1 cut(s) | 775 |
| NdeII | GATC | 4 cut(s) | 265, 501, 610, 736 |
| NlaIII | CATG | 3 cut(s) | 106, 325, 679 |
| NlaIV | GGNNCC | 4 cut(s) | 64, 183, 331, 717 |
| NmeAIII | GCCGAG | 1 cut(s) | 119 |
| NmuCI | GTSAC | 1 cut(s) | 230 |
| NsbI | TGCGCA | 1 cut(s) | 107 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 687 |
| PfeI | GAWTC | 1 cut(s) | 684 |
| PflFI | GACNNNGTC | 1 cut(s) | 167 |
| PfoI | TCCNGGA | 1 cut(s) | 793 |
| PkrI | GCNGC | 1 cut(s) | 118 |
| PleI | GAGTC | 1 cut(s) | 380 |
| PpsI | GAGTC | 1 cut(s) | 380 |
| PpuMI | RGGWCCY | 1 cut(s) | 542 |
| Psp124BI | GAGCTC | 3 cut(s) | 297, 412, 648 |
| Psp5II | RGGWCCY | 1 cut(s) | 542 |
| PspFI | CCCAGC | 2 cut(s) | 240, 251 |
| PspN4I | GGNNCC | 4 cut(s) | 64, 183, 331, 717 |
| PspPI | GGNCC | 7 cut(s) | 91, 158, 182, 318, 460, 542, 716 |
| PspPPI | RGGWCCY | 1 cut(s) | 542 |
| PsyI | GACNNNGTC | 1 cut(s) | 167 |
| PvuII | CAGCTG | 2 cut(s) | 251, 263 |
| RsaI | GTAC | 3 cut(s) | 155, 176, 572 |
| RsaNI | GTAC | 3 cut(s) | 154, 175, 571 |
| SacI | GAGCTC | 3 cut(s) | 297, 412, 648 |
| SaqAI | TTAA | 2 cut(s) | 633, 756 |
| SatI | GCNGC | 1 cut(s) | 117 |
| Sau3AI | GATC | 4 cut(s) | 265, 501, 610, 736 |
| Sau96I | GGNCC | 7 cut(s) | 91, 158, 182, 318, 460, 542, 716 |
| ScaI | AGTACT | 1 cut(s) | 176 |
| SchI | GAGTC | 1 cut(s) | 381 |
| ScrFI | CCNGG | 3 cut(s) | 228, 576, 795 |
| SduI | GDGCHC | 5 cut(s) | 258, 297, 334, 412, 648 |
| SfcI | CTRYAG | 1 cut(s) | 526 |
| SinI | GGWCC | 5 cut(s) | 158, 182, 460, 542, 716 |
| SmlI | CTYRAG | 2 cut(s) | 632, 647 |
| SmoI | CTYRAG | 2 cut(s) | 632, 647 |
| Sse9I | AATT | 1 cut(s) | 531 |
| SsiI | CCGC | 1 cut(s) | 114 |
| SspMI | CTAG | 5 cut(s) | 38, 326, 434, 453, 731 |
| SstI | GAGCTC | 3 cut(s) | 297, 412, 648 |
| StyD4I | CCNGG | 3 cut(s) | 226, 574, 793 |
| StyI | CCWWGG | 1 cut(s) | 334 |
| TaaI | ACNGT | 3 cut(s) | 158, 167, 290 |
| TaqI | TCGA | 1 cut(s) | 297 |
| TaqII | GACCGA | 1 cut(s) | 733 |
| TasI | AATT | 1 cut(s) | 531 |
| TatI | WGTACW | 1 cut(s) | 174 |
| TfiI | GAWTC | 1 cut(s) | 684 |
| Tru1I | TTAA | 2 cut(s) | 633, 756 |
| Tru9I | TTAA | 2 cut(s) | 633, 756 |
| TscAI | CASTG | 1 cut(s) | 427 |
| TseFI | GTSAC | 1 cut(s) | 230 |
| TseI | GCWGC | 1 cut(s) | 116 |
| Tsp45I | GTSAC | 1 cut(s) | 230 |
| TspGWI | ACGGA | 2 cut(s) | 130, 669 |
| TspRI | CASTG | 1 cut(s) | 427 |
| Tth111I | GACNNNGTC | 1 cut(s) | 167 |
| Vha464I | CTTAAG | 1 cut(s) | 632 |
| VpaK11BI | GGWCC | 5 cut(s) | 158, 182, 460, 542, 716 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 86 |
| XmiI | GTMKAC | 1 cut(s) | 561 |
| XspI | CTAG | 5 cut(s) | 38, 326, 434, 453, 731 |
| ZrmI | AGTACT | 1 cut(s) | 176 |