Rorug02G0454600

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000275
Physical Location & Seq
Reverse (-)
58394540 .. 58399841
5302 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0454600.1

Sequence Viewer

Length: 1572 bp
ATGAAGCTTTGGGAATTGACTGCGGTACTGTGCCTGATATGGGCGCTAACGCTCCTCTACGGCGAAATGCTCGCCTTCCGGCTGCCGTCTCTCTCCACTTGTCGATGGCCTCATCATCACTCTCAATCTCTCGACTATGTCAAGGTGGCCGTCCTCACAGACCCGCAGCTGACGGACAGAACCTCCCTCCCTCTCCCTCCAAAATCCCTCGCTCTCGAATTGGTTCAATTCTACTCCGACCTCTACATGCGCCGAGCTTTCCTTTCCTCCGTGCTCCCCTTCGATCCCGATGTCATTCTCTTCTTAGGTGATTATTTCGACGGCGGTCCTTATCTCTCTGATCATGAGTGGAAGGAATCGTTGAGCCGTCTCAAACATATTTTTTCACTGAGCAGCCAAGAAAGACATTCAACTATACCGGTTTACCGCATTCCGGGAAACCATGACATCGGATATGAGTTTCTCCACTCTCGTAGCCCACAGGCAATCAGACGATATGAAAAGGAATTTGGTAGCCGAAATTATCAATTTACGGTTGGAAAAGTGGAGTTCATTGCCATTGATTCCCAAGCTATTGATGGAAATCCTCAAGGATATCTGGCTTCCTCTACGCGTGCTTTTGTGAAGAATGTCTCTCTCGATGTTCAAGCTTATCCAAGGGTTTTATTGTCCCATATTCCATTATATCGACAGGATGGAACAGATTGTGGTCCCAATCGTAAGTCAGAAATTATCAACCAGCGGATTCATGTGCATTCTCCTGATATTCAAGAAATAGTGTACCAGAATTACGTTACCAAGGAATCTTCAAACTATTTATTGGACTCCATTCAACCAGTTCTTGTTTTATCTGGTCATGATCATGATCAGTGTGATGTTGTCCACAAGTCAAAATATGGGCCTGTGAAGGAGCACACTGTGGGGACAATAAGCTGGCAGCAGGGAAATGTGTATCCATCTTTCATGTTATTGTCTGCTAGTAATTTTGTACCTTCAAATACAGCCAGTTCTGGAGAGGCAGTCTTAACTCAACTGTGCTTTCTTCCTGTGCAACTACACATTTATATATGGTATCTGTCACTATTTGTTTTTACCCTTCTTGCCCTCCTGCTTTGGCCAACTGGTGGTGTGAGTTTTTGGCATCATTTTAGTGATCTAATGGTGTTTGGCAAACAACTAATAAGTAGCATTACAAGTAGACCAAAAGAGAAAGATGAAGATCTAAACTGTGAGTATGAGATGATGTGGGATGCAGAAGGATCAATGCAACTTGTCAAGAAAATTTTAAACGTTGCTGTTACCTGCATAAGTGAGACAAGCTCAGTTGAAAGCAGAGGTACTGCTGTGATGCGGCCGACAGCTATAAAGAATATTTCTCAGGAGTTAGAGGTTTCTGTGAATGCCGATGCCGATGCGTTTGATCCTATGGCAAAGACACTTTCTAGAGCAAGTAAATCTTGGACAAAGTTGGTAATCCAAAGATTGGTCCGGACATTTCGAATGGTCACAATCATCGCTGCTGTAAATGTGCCCATTTATATGTTGTTACTTTTCAAGGATTGGATTGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

523

Amino Acids

59.53

Weight (kDa)

6.31

Isoelectric Point (pI)

38.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Metallophos PF00149 49 - 289 3.3e-12 Calcineurin-like phosphoesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000275)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G05070 AT2G05100 AT2G05100 AT3G27690 AT3G27690
fragaria_vesca FvH4_3g37660 FvH4_6g32440 FvH4_6g38383 FvH4_6g38390 FvH4_6g38450 FvH4_6g38460 FvH4_6g40970 FvH4_6g41000
malus_domestica MD09G1122500.v1.1 MD09G1292900.v1.1 MD17G1109600.v1.1 MD17G1113400.v1.1 MD17G1137800.v1.1 MD17G1281900.v1.1
prunus_persica Prupe.3G004100_v2.0.a1 Prupe.3G174600_v2.0.a1 Prupe.3G174700_v2.0.a1 Prupe.3G201000_v2.0.a1 Prupe.3G201000_v2.0.a1
pyrus_communis pycom09g04690
rosa_chinensis RchiOBHm_Chr2g0138781 RchiOBHm_Chr2g0140601 RchiOBHm_Chr2g0140621 RchiOBHm_Chr2g0140661 RchiOBHm_Chr2g0140671 RchiOBHm_Chr2g0151701 RchiOBHm_Chr2g0156601 RchiOBHm_Chr2g0156611 RchiOBHm_Chr2g0156621 RchiOBHm_Chr3g0486251 RchiOBHm_Chr5g0067271 RchiOBHm_Chr5g0067731 RchiOBHm_Chr5g0067781 RchiOBHm_Chr5g0067851 RchiOBHm_Chr5g0067871 RchiOBHm_Chr5g0067881
rosa_laevigata RLG00000019760 RLG00000019883 RLG00000019890 RLG00000020570 RLG00000020571 RLG00000020572 RLG00000020573 RLG00000020923 RLG00000020924 RLG00000020925 RLG00000023090 RLG00000035922 RLG00000035943
rosa_multiflora Rmu_co7992426.1_g000001 Rmu_co8294383.1_g000001 Rmu_sc0000015.1_g000011 Rmu_sc0000435.1_g000050 Rmu_sc0000435.1_g000051 Rmu_sc0001857.1_g000019 Rmu_sc0003342.1_g000007 Rmu_sc0005294.1_g000040 Rmu_sc0005294.1_g000041 Rmu_sc0007131.1_g000005 Rmu_sc0007661.1_g000008 Rmu_sc0009883.1_g000012 Rmu_sc0011512.1_g000011 Rmu_sc0011512.1_g000012 Rmu_sc0011512.1_g000013 Rmu_sc0012576.1_g000001 Rmu_sc0014881.1_g000003 Rmu_sc0014881.1_g000004 Rmu_sc0014881.1_g000005 Rmu_ssc0000213.1_g000119
rosa_roxburghii Rroxscaffold_1G00013870 Rroxscaffold_2G00092910 Rroxscaffold_2G00092920 Rroxscaffold_2G00096220 Rroxscaffold_2G00096230 Rroxscaffold_2G00105960 Rroxscaffold_6G00395950
rosa_rugosa Rorug02G0428200 Rorug02G0428300 Rorug02G0454600 Rorug02G0454700 Rorug03G0224200 Rorug05G0383400 Rorug05G0385900
rosa_samantha Rh2AG402400 Rh2AG415500 Rh2AG489100 Rh2AG489200 Rh2AG489300 Rh2AG489400 Rh2AG520200 Rh2AG520300 Rh2AG520500 Rh2BG405200 Rh2BG501700 Rh2BG501800 Rh2BG533300 Rh2BG533500 Rh2BG533600 Rh2DG422600 Rh2DG434900 Rh2DG435000 Rh2DG435100 Rh2DG512800 Rh2DG512900 Rh2DG542100 Rh2DG542300 Rh2DG542400 Rh3AG274200 Rh3BG309500 Rh3CG308700 Rh5AG442900 Rh5AG444700 Rh5BG460100 Rh5DG475000 Rh5DG476700
rosa_wichuraiana Rw0G022540 Rw2G032710 Rw2G034000 Rw2G040110 Rw2G042910 Rw2G042920 Rw2G042930 Rw3G024310 Rw5G041390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1310
AccB7I CCANNNNNTGG 2 cut(s) 1124, 1483
AccI GTMKAC 1 cut(s) 1198
AccII CGCG 1 cut(s) 613
AccIII TCCGGA 1 cut(s) 1488
AciI CCGC 6 cut(s) 23, 164, 324, 427, 742, 1351
AclI AACGTT 1 cut(s) 1290
AclWI GGATC 3 cut(s) 278, 1267, 1415
AcoI YGGCCR 3 cut(s) 147, 1115, 1352
AcsI RAATTY 2 cut(s) 506, 1281
AdeI CACNNNGTG 1 cut(s) 919
AfaI GTAC 4 cut(s) 27, 782, 990, 1339
AfiI CCNNNNNNNGG 4 cut(s) 40, 433, 1124, 1483
AflIII ACRYGT 1 cut(s) 611
AgeI ACCGGT 1 cut(s) 418
AgsI TTSAA 9 cut(s) 227, 411, 647, 770, 810, 833, 996, 1328, 1555
AjuI GAANNNNNNNTTGG 2 cut(s) 492, 524
AluBI AGCT 8 cut(s) 7, 169, 257, 572, 650, 933, 1320, 1361
AluI AGCT 8 cut(s) 7, 169, 257, 572, 650, 933, 1320, 1361
Alw21I GWGCWC 2 cut(s) 276, 915
Alw26I GTCTC 4 cut(s) 93, 374, 637, 1307
AlwI GGATC 3 cut(s) 278, 1267, 1415
Aor13HI TCCGGA 1 cut(s) 1488
AoxI GGCC 5 cut(s) 107, 147, 899, 1115, 1352
ApeKI GCWGC 5 cut(s) 82, 166, 393, 937, 1517
ApoI RAATTY 2 cut(s) 506, 1281
AsiGI ACCGGT 1 cut(s) 418
Asp700I GAANNNNTTC 1 cut(s) 222
AspLEI GCGC 2 cut(s) 46, 252
AspS9I GGNCC 4 cut(s) 326, 710, 899, 1486
AsuC2I CCSGG 1 cut(s) 435
AsuHPI GGTGA 1 cut(s) 320
AsuII TTCGAA 1 cut(s) 1498
AvaII GGWCC 3 cut(s) 326, 710, 1486
BaeGI GKGCMC 1 cut(s) 1533
BaeI ACNNNNGTAYC 2 cut(s) 1329, 1362
BalI TGGCCA 1 cut(s) 1117
Bbv12I GWGCWC 2 cut(s) 276, 915
BbvI GCAGC 5 cut(s) 69, 178, 405, 949, 1504
BccI CCATC 4 cut(s) 99, 572, 689, 964
BceAI ACGGC 5 cut(s) 70, 76, 134, 337, 351
BcgI CGANNNNNNTGC 2 cut(s) 1394, 1428
BciVI GTATCC 1 cut(s) 963
BclI TGATCA 3 cut(s) 340, 859, 865
BcnI CCSGG 1 cut(s) 435
BcoDI GTCTC 4 cut(s) 93, 374, 637, 1307
BfaI CTAG 2 cut(s) 978, 1443
BfoI RGCGCY 1 cut(s) 47
BfuAI ACCTGC 1 cut(s) 1310
BfuI GTATCC 1 cut(s) 963
BglII AGATCT 1 cut(s) 1219
BisI GCNGC 6 cut(s) 83, 167, 394, 938, 1352, 1518
BlsI GCNGC 6 cut(s) 84, 168, 395, 939, 1353, 1519
Bme1390I CCNGG 1 cut(s) 435
Bme18I GGWCC 3 cut(s) 326, 710, 1486
BmgT120I GGNCC 4 cut(s) 326, 710, 899, 1486
BmiI GGNNCC 1 cut(s) 712
BmrFI CCNGG 1 cut(s) 435
BmsI GCATC 5 cut(s) 1150, 1240, 1338, 1396, 1402
BoxI GACNNNNGTC 1 cut(s) 324
BplI GAGNNNNNCTC 2 cut(s) 1304, 1336
BpmI CTGGAG 1 cut(s) 1032
Bpu14I TTCGAA 1 cut(s) 1498
BpuEI CTTGAG 1 cut(s) 573
BpuMI CCSGG 1 cut(s) 435
BsaBI GATNNNNATC 3 cut(s) 582, 864, 1218
BsaJI CCNNGG 2 cut(s) 656, 798
BsaWI WCCGGW 2 cut(s) 418, 1488
BsaXI ACNNNNNCTCC 4 cut(s) 167, 197, 1005, 1035
Bsc4I CCNNNNNNNGG 4 cut(s) 40, 433, 1124, 1483
Bse118I RCCGGY 1 cut(s) 418
Bse1I ACTGG 3 cut(s) 836, 1005, 1126
Bse3DI GCAATG 1 cut(s) 552
Bse8I GATNNNNATC 3 cut(s) 582, 864, 1218
BseAI TCCGGA 1 cut(s) 1488
BseDI CCNNGG 2 cut(s) 656, 798
BseGI GGATG 2 cut(s) 700, 1255
BseJI GATNNNNATC 3 cut(s) 582, 864, 1218
BseLI CCNNNNNNNGG 4 cut(s) 40, 433, 1124, 1483
BseMI GCAATG 1 cut(s) 552
BseMII CTCAG 3 cut(s) 380, 1335, 1391
BseNI ACTGG 3 cut(s) 836, 1005, 1126
BseRI GAGGAG 1 cut(s) 44
BseSI GKGCMC 1 cut(s) 1533
BseX3I CGGCCG 1 cut(s) 1352
BseXI GCAGC 5 cut(s) 69, 178, 405, 949, 1504
Bsh1236I CGCG 1 cut(s) 613
Bsh1285I CGRYCG 1 cut(s) 1355
BshFI GGCC 5 cut(s) 109, 149, 901, 1117, 1354
BshTI ACCGGT 1 cut(s) 418
BsiEI CGRYCG 1 cut(s) 1355
BsiHKAI GWGCWC 2 cut(s) 276, 915
BsiSI CCGG 4 cut(s) 79, 419, 434, 1489
BslFI GGGAC 3 cut(s) 655, 696, 937
BslI CCNNNNNNNGG 4 cut(s) 40, 433, 1124, 1483
BsmAI GTCTC 4 cut(s) 93, 374, 637, 1307
BsmBI CGTCTC 2 cut(s) 93, 374
BsmFI GGGAC 3 cut(s) 655, 696, 937
BsmI GAATGC 3 cut(s) 429, 754, 1405
BsnI GGCC 5 cut(s) 109, 149, 901, 1117, 1354
Bsp119I TTCGAA 1 cut(s) 1498
Bsp1286I GDGCHC 3 cut(s) 276, 915, 1533
Bsp13I TCCGGA 1 cut(s) 1488
Bsp143I GATC 8 cut(s) 283, 340, 859, 865, 1153, 1219, 1259, 1420
BspACI CCGC 6 cut(s) 23, 164, 324, 427, 742, 1351
BspANI GGCC 5 cut(s) 109, 149, 901, 1117, 1354
BspCNI CTCAG 3 cut(s) 381, 1334, 1390
BspEI TCCGGA 1 cut(s) 1488
BspFNI CGCG 1 cut(s) 613
BspHI TCATGA 3 cut(s) 343, 856, 862
BspLI GGNNCC 1 cut(s) 712
BspMI ACCTGC 1 cut(s) 1310
BspPI GGATC 3 cut(s) 278, 1267, 1415
BspT104I TTCGAA 1 cut(s) 1498
BsrDI GCAATG 1 cut(s) 552
BsrFI RCCGGY 1 cut(s) 418
BsrI ACTGG 3 cut(s) 836, 1005, 1126
BssAI RCCGGY 1 cut(s) 418
BssECI CCNNGG 2 cut(s) 656, 798
BssMI GATC 8 cut(s) 283, 340, 859, 865, 1153, 1219, 1259, 1420
BssT1I CCWWGG 2 cut(s) 656, 798
Bst4CI ACNGT 5 cut(s) 30, 535, 919, 1035, 1229
Bst6I CTCTTC 1 cut(s) 305
BstBI TTCGAA 1 cut(s) 1498
BstC8I GCNNGC 3 cut(s) 72, 615, 935
BstDEI CTNAG 4 cut(s) 304, 389, 1321, 1377
BstF5I GGATG 2 cut(s) 700, 1255
BstFNI CGCG 1 cut(s) 613
BstH2I RGCGCY 1 cut(s) 47
BstHHI GCGC 2 cut(s) 46, 252
BstKTI GATC 8 cut(s) 286, 343, 862, 868, 1156, 1222, 1262, 1423
BstMAI GTCTC 4 cut(s) 93, 374, 637, 1307
BstMBI GATC 8 cut(s) 283, 340, 859, 865, 1153, 1219, 1259, 1420
BstMCI CGRYCG 1 cut(s) 1355
BstNSI RCATGY 1 cut(s) 250
BstPAI GACNNNNGTC 1 cut(s) 324
BstSCI CCNGG 1 cut(s) 433
BstSLI GKGCMC 1 cut(s) 1533
BstUI CGCG 1 cut(s) 613
BstV1I GCAGC 5 cut(s) 69, 178, 405, 949, 1504
BstX2I RGATCY 1 cut(s) 1219
BstYI RGATCY 1 cut(s) 1219
BstZI CGGCCG 1 cut(s) 1352
BsuI GTATCC 1 cut(s) 963
BsuRI GGCC 5 cut(s) 109, 149, 901, 1117, 1354
BtgZI GCGATG 1 cut(s) 1498
BtsCI GGATG 2 cut(s) 700, 1255
BtsIMutI CAGTG 3 cut(s) 386, 875, 915
BveI ACCTGC 1 cut(s) 1310
Cac8I GCNNGC 3 cut(s) 72, 615, 935
CciI TCATGA 3 cut(s) 343, 856, 862
CfoI GCGC 2 cut(s) 46, 252
Cfr10I RCCGGY 1 cut(s) 418
Cfr13I GGNCC 4 cut(s) 326, 710, 899, 1486
Csp6I GTAC 4 cut(s) 26, 781, 989, 1338
CspAI ACCGGT 1 cut(s) 418
CviAII CATG 7 cut(s) 247, 344, 443, 749, 857, 863, 964
CviQI GTAC 4 cut(s) 26, 781, 989, 1338
DdeI CTNAG 4 cut(s) 304, 389, 1321, 1377
DpnI GATC 8 cut(s) 285, 342, 861, 867, 1155, 1221, 1261, 1422
DpnII GATC 8 cut(s) 283, 340, 859, 865, 1153, 1219, 1259, 1420
DraI TTTAAA 1 cut(s) 1287
DraIII CACNNNGTG 1 cut(s) 919
EaeI YGGCCR 3 cut(s) 147, 1115, 1352
EagI CGGCCG 1 cut(s) 1352
Eam1104I CTCTTC 1 cut(s) 305
EarI CTCTTC 1 cut(s) 305
EclXI CGGCCG 1 cut(s) 1352
Eco130I CCWWGG 2 cut(s) 656, 798
Eco32I GATATC 1 cut(s) 596
Eco47I GGWCC 3 cut(s) 326, 710, 1486
Eco52I CGGCCG 1 cut(s) 1352
EcoRV GATATC 1 cut(s) 596
EcoT14I CCWWGG 2 cut(s) 656, 798
ErhI CCWWGG 2 cut(s) 656, 798
Esp3I CGTCTC 2 cut(s) 93, 374
FaeI CATG 7 cut(s) 250, 347, 446, 752, 860, 866, 967
FalI AAGNNNNNCTT 2 cut(s) 1441, 1473
FaqI GGGAC 3 cut(s) 655, 696, 937
FatI CATG 7 cut(s) 246, 343, 442, 748, 856, 862, 963
FauI CCCGC 1 cut(s) 171
FbaI TGATCA 3 cut(s) 340, 859, 865
FblI GTMKAC 1 cut(s) 1198
Fnu4HI GCNGC 6 cut(s) 83, 167, 394, 938, 1352, 1518
FokI GGATG 2 cut(s) 707, 1262
Fsp4HI GCNGC 6 cut(s) 83, 167, 394, 938, 1352, 1518
FspBI CTAG 2 cut(s) 978, 1443
GlaI GCGC 2 cut(s) 45, 251
GluI GCNGC 6 cut(s) 83, 167, 394, 938, 1352, 1518
GsuI CTGGAG 1 cut(s) 1032
HaeII RGCGCY 1 cut(s) 47
HaeIII GGCC 5 cut(s) 109, 149, 901, 1117, 1354
HapII CCGG 4 cut(s) 79, 419, 434, 1489
HhaI GCGC 2 cut(s) 46, 252
Hin1II CATG 7 cut(s) 250, 347, 446, 752, 860, 866, 967
Hin6I GCGC 2 cut(s) 44, 250
HinP1I GCGC 2 cut(s) 44, 250
HindIII AAGCTT 2 cut(s) 5, 648
HinfI GANTC 5 cut(s) 356, 563, 745, 803, 824
HpaII CCGG 4 cut(s) 79, 419, 434, 1489
HphI GGTGA 1 cut(s) 320
Hpy166II GTNNAC 4 cut(s) 424, 781, 883, 1199
Hpy188I TCNGA 5 cut(s) 238, 340, 452, 491, 727
Hpy8I GTNNAC 4 cut(s) 424, 781, 883, 1199
Hpy99I CGWCG 1 cut(s) 323
HpyAV CCTTC 7 cut(s) 85, 289, 346, 901, 1002, 1106, 1250
HpyCH4III ACNGT 5 cut(s) 30, 535, 919, 1035, 1229
HpyCH4IV ACGT 2 cut(s) 792, 1290
HpyCH4V TGCA 5 cut(s) 754, 1051, 1253, 1267, 1305
HpyF3I CTNAG 4 cut(s) 304, 389, 1321, 1377
HpySE526I ACGT 2 cut(s) 792, 1290
Hsp92II CATG 7 cut(s) 250, 347, 446, 752, 860, 866, 967
HspAI GCGC 2 cut(s) 44, 250
Kpn2I TCCGGA 1 cut(s) 1488
Ksp22I TGATCA 3 cut(s) 340, 859, 865
Kzo9I GATC 8 cut(s) 283, 340, 859, 865, 1153, 1219, 1259, 1420
LmnI GCTCC 3 cut(s) 57, 279, 910
Lsp1109I GCAGC 5 cut(s) 69, 178, 405, 949, 1504
LweI GCATC 5 cut(s) 1150, 1240, 1338, 1396, 1402
MaeI CTAG 2 cut(s) 978, 1443
MaeII ACGT 2 cut(s) 792, 1290
MaeIII GTNAC 5 cut(s) 793, 1077, 1297, 1504, 1545
MalI GATC 8 cut(s) 285, 342, 861, 867, 1155, 1221, 1261, 1422
MboI GATC 8 cut(s) 283, 340, 859, 865, 1153, 1219, 1259, 1420
MboII GAAGA 5 cut(s) 292, 637, 798, 1034, 1229
MflI RGATCY 1 cut(s) 1219
MhlI GDGCHC 3 cut(s) 276, 915, 1533
MlsI TGGCCA 1 cut(s) 1117
MluI ACGCGT 1 cut(s) 611
MluNI TGGCCA 1 cut(s) 1117
MlyI GAGTC 1 cut(s) 818
MmeI TCCRAC 2 cut(s) 261, 517
Mox20I TGGCCA 1 cut(s) 1117
MroI TCCGGA 1 cut(s) 1488
MroXI GAANNNNTTC 1 cut(s) 222
MscI TGGCCA 1 cut(s) 1117
MseI TTAA 2 cut(s) 1025, 1286
MslI CAYNNNNRTG 3 cut(s) 861, 1149, 1538
Msp20I TGGCCA 1 cut(s) 1117
MspA1I CMGCKG 2 cut(s) 169, 742
MspI CCGG 4 cut(s) 79, 419, 434, 1489
MspR9I CCNGG 1 cut(s) 435
Mva1269I GAATGC 3 cut(s) 429, 754, 1405
MvnI CGCG 1 cut(s) 613
NciI CCSGG 1 cut(s) 435
NdeII GATC 8 cut(s) 283, 340, 859, 865, 1153, 1219, 1259, 1420
NlaIII CATG 7 cut(s) 250, 347, 446, 752, 860, 866, 967
NlaIV GGNNCC 1 cut(s) 712
NmeAIII GCCGAG 1 cut(s) 278
NmuCI GTSAC 2 cut(s) 1077, 1504
NspI RCATGY 1 cut(s) 250
NspV TTCGAA 1 cut(s) 1498
PagI TCATGA 3 cut(s) 343, 856, 862
PctI GAATGC 3 cut(s) 429, 754, 1405
PdmI GAANNNNTTC 1 cut(s) 222
PfeI GAWTC 4 cut(s) 356, 563, 745, 803
PflFI GACNNNGTC 1 cut(s) 137
PflMI CCANNNNNTGG 2 cut(s) 1124, 1483
PfoI TCCNGGA 1 cut(s) 433
PinAI ACCGGT 1 cut(s) 418
PkrI GCNGC 6 cut(s) 84, 168, 395, 939, 1353, 1519
PleI GAGTC 1 cut(s) 818
PpsI GAGTC 1 cut(s) 818
PshAI GACNNNNGTC 1 cut(s) 324
Psp1406I AACGTT 1 cut(s) 1290
PspN4I GGNNCC 1 cut(s) 712
PspPI GGNCC 4 cut(s) 326, 710, 899, 1486
PsuI RGATCY 1 cut(s) 1219
PsyI GACNNNGTC 1 cut(s) 137
PvuII CAGCTG 1 cut(s) 169
RsaI GTAC 4 cut(s) 27, 782, 990, 1339
RsaNI GTAC 4 cut(s) 26, 781, 989, 1338
RseI CAYNNNNRTG 3 cut(s) 861, 1149, 1538
SaqAI TTAA 2 cut(s) 1025, 1286
SatI GCNGC 6 cut(s) 83, 167, 394, 938, 1352, 1518
Sau3AI GATC 8 cut(s) 283, 340, 859, 865, 1153, 1219, 1259, 1420
Sau96I GGNCC 4 cut(s) 326, 710, 899, 1486
SchI GAGTC 1 cut(s) 818
ScrFI CCNGG 1 cut(s) 435
SduI GDGCHC 3 cut(s) 276, 915, 1533
SfaNI GCATC 5 cut(s) 1150, 1240, 1338, 1396, 1402
SfuI TTCGAA 1 cut(s) 1498
SinI GGWCC 3 cut(s) 326, 710, 1486
SmiMI CAYNNNNRTG 3 cut(s) 861, 1149, 1538
SmlI CTYRAG 1 cut(s) 588
SmoI CTYRAG 1 cut(s) 588
SsiI CCGC 6 cut(s) 23, 164, 324, 427, 742, 1351
SspI AATATT 1 cut(s) 1372
SspMI CTAG 2 cut(s) 978, 1443
StyD4I CCNGG 1 cut(s) 433
StyI CCWWGG 2 cut(s) 656, 798
TaaI ACNGT 5 cut(s) 30, 535, 919, 1035, 1229
TaiI ACGT 2 cut(s) 795, 1293
TaqI TCGA 8 cut(s) 103, 132, 216, 282, 318, 639, 688, 1498
TauI GCSGC 1 cut(s) 1354
TfiI GAWTC 4 cut(s) 356, 563, 745, 803
Tru1I TTAA 2 cut(s) 1025, 1286
Tru9I TTAA 2 cut(s) 1025, 1286
TscAI CASTG 3 cut(s) 393, 875, 922
TseFI GTSAC 2 cut(s) 1077, 1504
TseI GCWGC 5 cut(s) 82, 166, 393, 937, 1517
Tsp45I GTSAC 2 cut(s) 1077, 1504
TspDTI ATGAA 6 cut(s) 17, 513, 541, 737, 952, 1230
TspGWI ACGGA 2 cut(s) 188, 259
TspRI CASTG 3 cut(s) 393, 875, 922
Tth111I GACNNNGTC 1 cut(s) 137
Van91I CCANNNNNTGG 2 cut(s) 1124, 1483
VpaK11BI GGWCC 3 cut(s) 326, 710, 1486
XapI RAATTY 2 cut(s) 506, 1281
XbaI TCTAGA 1 cut(s) 1442
XceI RCATGY 1 cut(s) 250
XcmI CCANNNNNNNNNTGG 1 cut(s) 575
XmiI GTMKAC 1 cut(s) 1198
XmnI GAANNNNTTC 1 cut(s) 222
XspI CTAG 2 cut(s) 978, 1443
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.