The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Chloroa_b-bind | PF00504 | 46 - 189 | 7.6e-34 | Chlorophyll A-B binding protein |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 70, 100 |
| AclWI | GGATC | 4 cut(s) | 226, 512, 533, 611 |
| AcoI | YGGCCR | 2 cut(s) | 37, 67 |
| AcsI | RAATTY | 1 cut(s) | 155 |
| AcuI | CTGAAG | 2 cut(s) | 564, 581 |
| AdeI | CACNNNGTG | 1 cut(s) | 479 |
| AgsI | TTSAA | 2 cut(s) | 328, 449 |
| AjnI | CCWGG | 3 cut(s) | 160, 423, 502 |
| AluBI | AGCT | 3 cut(s) | 9, 223, 283 |
| AluI | AGCT | 3 cut(s) | 9, 223, 283 |
| Alw21I | GWGCWC | 3 cut(s) | 262, 285, 435 |
| Alw26I | GTCTC | 3 cut(s) | 194, 342, 491 |
| Alw44I | GTGCAC | 1 cut(s) | 258 |
| AlwI | GGATC | 4 cut(s) | 226, 512, 533, 611 |
| AoxI | GGCC | 4 cut(s) | 37, 67, 246, 358 |
| ApaLI | GTGCAC | 1 cut(s) | 258 |
| ApeKI | GCWGC | 1 cut(s) | 54 |
| ApoI | RAATTY | 1 cut(s) | 155 |
| AspLEI | GCGC | 1 cut(s) | 87 |
| AspS9I | GGNCC | 4 cut(s) | 116, 246, 470, 584 |
| AsuC2I | CCSGG | 1 cut(s) | 663 |
| AsuHPI | GGTGA | 5 cut(s) | 67, 164, 176, 241, 491 |
| AvaII | GGWCC | 3 cut(s) | 116, 470, 584 |
| BaeGI | GKGCMC | 1 cut(s) | 262 |
| BanII | GRGCYC | 1 cut(s) | 285 |
| BbsI | GAAGAC | 1 cut(s) | 265 |
| Bbv12I | GWGCWC | 3 cut(s) | 262, 285, 435 |
| BbvI | GCAGC | 1 cut(s) | 66 |
| BccI | CCATC | 3 cut(s) | 145, 168, 237 |
| BciT130I | CCWGG | 3 cut(s) | 162, 425, 504 |
| BciVI | GTATCC | 1 cut(s) | 446 |
| BcnI | CCSGG | 1 cut(s) | 663 |
| BcoDI | GTCTC | 3 cut(s) | 194, 342, 491 |
| BfaI | CTAG | 2 cut(s) | 263, 407 |
| BfuI | GTATCC | 1 cut(s) | 446 |
| BisI | GCNGC | 2 cut(s) | 55, 70 |
| BlsI | GCNGC | 2 cut(s) | 56, 71 |
| Bme1390I | CCNGG | 4 cut(s) | 162, 425, 504, 663 |
| Bme18I | GGWCC | 3 cut(s) | 116, 470, 584 |
| BmgT120I | GGNCC | 4 cut(s) | 116, 246, 470, 584 |
| BmiI | GGNNCC | 3 cut(s) | 117, 511, 585 |
| BmrFI | CCNGG | 4 cut(s) | 162, 425, 504, 663 |
| BmsI | GCATC | 2 cut(s) | 81, 411 |
| BpiI | GAAGAC | 1 cut(s) | 265 |
| BpmI | CTGGAG | 1 cut(s) | 525 |
| BpuEI | CTTGAG | 1 cut(s) | 245 |
| BpuMI | CCSGG | 1 cut(s) | 663 |
| BsaI | GGTCTC | 3 cut(s) | 194, 342, 491 |
| BsaJI | CCNNGG | 4 cut(s) | 58, 160, 502, 661 |
| Bse118I | RCCGGY | 1 cut(s) | 35 |
| Bse1I | ACTGG | 3 cut(s) | 154, 580, 620 |
| BseBI | CCWGG | 3 cut(s) | 162, 425, 504 |
| BseDI | CCNNGG | 4 cut(s) | 58, 160, 502, 661 |
| BseGI | GGATG | 3 cut(s) | 179, 272, 402 |
| BseMII | CTCAG | 2 cut(s) | 189, 363 |
| BseNI | ACTGG | 3 cut(s) | 154, 580, 620 |
| BseRI | GAGGAG | 1 cut(s) | 522 |
| BseSI | GKGCMC | 1 cut(s) | 262 |
| BseXI | GCAGC | 1 cut(s) | 66 |
| BshFI | GGCC | 4 cut(s) | 39, 69, 248, 360 |
| BsiHKAI | GWGCWC | 3 cut(s) | 262, 285, 435 |
| BsiSI | CCGG | 2 cut(s) | 36, 663 |
| BslFI | GGGAC | 4 cut(s) | 129, 191, 597, 644 |
| BsmAI | GTCTC | 3 cut(s) | 194, 342, 491 |
| BsmFI | GGGAC | 4 cut(s) | 129, 191, 597, 644 |
| BsnI | GGCC | 4 cut(s) | 39, 69, 248, 360 |
| Bso31I | GGTCTC | 3 cut(s) | 194, 342, 491 |
| Bsp1286I | GDGCHC | 3 cut(s) | 262, 285, 435 |
| Bsp143I | GATC | 4 cut(s) | 231, 517, 538, 616 |
| BspACI | CCGC | 2 cut(s) | 70, 100 |
| BspANI | GGCC | 4 cut(s) | 39, 69, 248, 360 |
| BspCNI | CTCAG | 2 cut(s) | 190, 362 |
| BspLI | GGNNCC | 3 cut(s) | 117, 511, 585 |
| BspPI | GGATC | 4 cut(s) | 226, 512, 533, 611 |
| BspTNI | GGTCTC | 3 cut(s) | 194, 342, 491 |
| BsrFI | RCCGGY | 1 cut(s) | 35 |
| BsrI | ACTGG | 3 cut(s) | 154, 580, 620 |
| BssAI | RCCGGY | 1 cut(s) | 35 |
| BssECI | CCNNGG | 4 cut(s) | 58, 160, 502, 661 |
| BssMI | GATC | 4 cut(s) | 231, 517, 538, 616 |
| BssT1I | CCWWGG | 1 cut(s) | 58 |
| Bst2UI | CCWGG | 3 cut(s) | 162, 425, 504 |
| Bst4CI | ACNGT | 2 cut(s) | 91, 218 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 11 |
| BstC8I | GCNNGC | 2 cut(s) | 7, 37 |
| BstDEI | CTNAG | 2 cut(s) | 198, 349 |
| BstF5I | GGATG | 3 cut(s) | 179, 272, 402 |
| BstHHI | GCGC | 1 cut(s) | 87 |
| BstKTI | GATC | 4 cut(s) | 234, 520, 541, 619 |
| BstMAI | GTCTC | 3 cut(s) | 194, 342, 491 |
| BstMBI | GATC | 4 cut(s) | 231, 517, 538, 616 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 11, 416, 632 |
| BstNI | CCWGG | 3 cut(s) | 162, 425, 504 |
| BstSCI | CCNGG | 4 cut(s) | 160, 423, 502, 661 |
| BstSLI | GKGCMC | 1 cut(s) | 262 |
| BstV1I | GCAGC | 1 cut(s) | 66 |
| BstV2I | GAAGAC | 1 cut(s) | 265 |
| BsuI | GTATCC | 1 cut(s) | 446 |
| BsuRI | GGCC | 4 cut(s) | 39, 69, 248, 360 |
| BtsCI | GGATG | 3 cut(s) | 179, 272, 402 |
| BtsI | GCAGTG | 1 cut(s) | 180 |
| BtsIMutI | CAGTG | 3 cut(s) | 87, 180, 627 |
| Cac8I | GCNNGC | 2 cut(s) | 7, 37 |
| CfoI | GCGC | 1 cut(s) | 87 |
| Cfr10I | RCCGGY | 1 cut(s) | 35 |
| Cfr13I | GGNCC | 4 cut(s) | 116, 246, 470, 584 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 510, 545 |
| CviAII | CATG | 6 cut(s) | 79, 250, 392, 436, 608, 636 |
| DdeI | CTNAG | 2 cut(s) | 198, 349 |
| DpnI | GATC | 4 cut(s) | 233, 519, 540, 618 |
| DpnII | GATC | 4 cut(s) | 231, 517, 538, 616 |
| DraIII | CACNNNGTG | 1 cut(s) | 479 |
| EaeI | YGGCCR | 2 cut(s) | 37, 67 |
| Ecl136II | GAGCTC | 1 cut(s) | 283 |
| Eco130I | CCWWGG | 1 cut(s) | 58 |
| Eco24I | GRGCYC | 1 cut(s) | 285 |
| Eco31I | GGTCTC | 3 cut(s) | 194, 342, 491 |
| Eco47I | GGWCC | 3 cut(s) | 116, 470, 584 |
| Eco53kI | GAGCTC | 1 cut(s) | 283 |
| Eco57I | CTGAAG | 2 cut(s) | 564, 581 |
| EcoICRI | GAGCTC | 1 cut(s) | 283 |
| EcoO109I | RGGNCCY | 1 cut(s) | 584 |
| EcoRI | GAATTC | 1 cut(s) | 155 |
| EcoRII | CCWGG | 3 cut(s) | 160, 423, 502 |
| EcoT14I | CCWWGG | 1 cut(s) | 58 |
| EcoT22I | ATGCAT | 1 cut(s) | 637 |
| EcoT38I | GRGCYC | 1 cut(s) | 285 |
| ErhI | CCWWGG | 1 cut(s) | 58 |
| FaeI | CATG | 6 cut(s) | 82, 253, 395, 439, 611, 639 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 345, 377 |
| FaqI | GGGAC | 4 cut(s) | 129, 191, 597, 644 |
| FatI | CATG | 6 cut(s) | 78, 249, 391, 435, 607, 635 |
| Fnu4HI | GCNGC | 2 cut(s) | 55, 70 |
| FokI | GGATG | 3 cut(s) | 186, 279, 389 |
| FriOI | GRGCYC | 1 cut(s) | 285 |
| Fsp4HI | GCNGC | 2 cut(s) | 55, 70 |
| FspBI | CTAG | 2 cut(s) | 263, 407 |
| GlaI | GCGC | 1 cut(s) | 86 |
| GluI | GCNGC | 2 cut(s) | 55, 70 |
| GsuI | CTGGAG | 1 cut(s) | 525 |
| HaeIII | GGCC | 4 cut(s) | 39, 69, 248, 360 |
| HapII | CCGG | 2 cut(s) | 36, 663 |
| HhaI | GCGC | 1 cut(s) | 87 |
| Hin1II | CATG | 6 cut(s) | 82, 253, 395, 439, 611, 639 |
| Hin6I | GCGC | 1 cut(s) | 85 |
| HinP1I | GCGC | 1 cut(s) | 85 |
| HincII | GTYRAC | 1 cut(s) | 304 |
| HindII | GTYRAC | 1 cut(s) | 304 |
| HinfI | GANTC | 1 cut(s) | 491 |
| HpaII | CCGG | 2 cut(s) | 36, 663 |
| HphI | GGTGA | 5 cut(s) | 67, 164, 176, 241, 491 |
| Hpy166II | GTNNAC | 2 cut(s) | 260, 304 |
| Hpy188I | TCNGA | 2 cut(s) | 127, 352 |
| Hpy188III | TCNNGA | 2 cut(s) | 488, 542 |
| Hpy8I | GTNNAC | 2 cut(s) | 260, 304 |
| HpyAV | CCTTC | 4 cut(s) | 347, 443, 476, 556 |
| HpyCH4III | ACNGT | 2 cut(s) | 91, 218 |
| HpyCH4V | TGCA | 4 cut(s) | 14, 260, 395, 635 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 11, 416, 632 |
| HpyF3I | CTNAG | 2 cut(s) | 198, 349 |
| Hsp92II | CATG | 6 cut(s) | 82, 253, 395, 439, 611, 639 |
| HspAI | GCGC | 1 cut(s) | 85 |
| KroI | GCCGGC | 1 cut(s) | 35 |
| KroNI | GCCGGC | 1 cut(s) | 37 |
| Kzo9I | GATC | 4 cut(s) | 231, 517, 538, 616 |
| LmnI | GCTCC | 1 cut(s) | 509 |
| Lsp1109I | GCAGC | 1 cut(s) | 66 |
| LweI | GCATC | 2 cut(s) | 81, 411 |
| MaeI | CTAG | 2 cut(s) | 263, 407 |
| MaeIII | GTNAC | 2 cut(s) | 164, 571 |
| MalI | GATC | 4 cut(s) | 233, 519, 540, 618 |
| MboI | GATC | 4 cut(s) | 231, 517, 538, 616 |
| MboII | GAAGA | 2 cut(s) | 265, 337 |
| MhlI | GDGCHC | 3 cut(s) | 262, 285, 435 |
| MluCI | AATT | 1 cut(s) | 155 |
| MnlI | CCTC | 7 cut(s) | 75, 220, 307, 395, 461, 500, 608 |
| Mph1103I | ATGCAT | 1 cut(s) | 637 |
| MroNI | GCCGGC | 1 cut(s) | 35 |
| MslI | CAYNNNNRTG | 2 cut(s) | 77, 265 |
| MspI | CCGG | 2 cut(s) | 36, 663 |
| MspR9I | CCNGG | 4 cut(s) | 162, 425, 504, 663 |
| MvaI | CCWGG | 3 cut(s) | 162, 425, 504 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 11, 416, 632 |
| NaeI | GCCGGC | 1 cut(s) | 37 |
| NciI | CCSGG | 1 cut(s) | 663 |
| NdeII | GATC | 4 cut(s) | 231, 517, 538, 616 |
| NgoMIV | GCCGGC | 1 cut(s) | 35 |
| NlaIII | CATG | 6 cut(s) | 82, 253, 395, 439, 611, 639 |
| NlaIV | GGNNCC | 3 cut(s) | 117, 511, 585 |
| NmuCI | GTSAC | 1 cut(s) | 164 |
| NsiI | ATGCAT | 1 cut(s) | 637 |
| PdiI | GCCGGC | 1 cut(s) | 37 |
| PfeI | GAWTC | 1 cut(s) | 491 |
| PkrI | GCNGC | 2 cut(s) | 56, 71 |
| PpuMI | RGGWCCY | 1 cut(s) | 584 |
| Psp124BI | GAGCTC | 1 cut(s) | 285 |
| Psp5II | RGGWCCY | 1 cut(s) | 584 |
| Psp6I | CCWGG | 3 cut(s) | 160, 423, 502 |
| PspGI | CCWGG | 3 cut(s) | 160, 423, 502 |
| PspN4I | GGNNCC | 3 cut(s) | 117, 511, 585 |
| PspPI | GGNCC | 4 cut(s) | 116, 246, 470, 584 |
| PspPPI | RGGWCCY | 1 cut(s) | 584 |
| RseI | CAYNNNNRTG | 2 cut(s) | 77, 265 |
| SacI | GAGCTC | 1 cut(s) | 285 |
| SatI | GCNGC | 2 cut(s) | 55, 70 |
| Sau3AI | GATC | 4 cut(s) | 231, 517, 538, 616 |
| Sau96I | GGNCC | 4 cut(s) | 116, 246, 470, 584 |
| ScrFI | CCNGG | 4 cut(s) | 162, 425, 504, 663 |
| SduI | GDGCHC | 3 cut(s) | 262, 285, 435 |
| SfaNI | GCATC | 2 cut(s) | 81, 411 |
| SinI | GGWCC | 3 cut(s) | 116, 470, 584 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 77, 265 |
| SmlI | CTYRAG | 1 cut(s) | 224 |
| SmoI | CTYRAG | 1 cut(s) | 224 |
| Sse9I | AATT | 1 cut(s) | 155 |
| SsiI | CCGC | 2 cut(s) | 70, 100 |
| SspMI | CTAG | 2 cut(s) | 263, 407 |
| SstI | GAGCTC | 1 cut(s) | 285 |
| StyD4I | CCNGG | 4 cut(s) | 160, 423, 502, 661 |
| StyI | CCWWGG | 1 cut(s) | 58 |
| TaaI | ACNGT | 2 cut(s) | 91, 218 |
| TaqI | TCGA | 1 cut(s) | 489 |
| TasI | AATT | 1 cut(s) | 155 |
| TauI | GCSGC | 1 cut(s) | 72 |
| TfiI | GAWTC | 1 cut(s) | 491 |
| TscAI | CASTG | 3 cut(s) | 94, 187, 627 |
| TseFI | GTSAC | 1 cut(s) | 164 |
| TseI | GCWGC | 1 cut(s) | 54 |
| Tsp45I | GTSAC | 1 cut(s) | 164 |
| TspRI | CASTG | 3 cut(s) | 94, 187, 627 |
| VneI | GTGCAC | 1 cut(s) | 258 |
| VpaK11BI | GGWCC | 3 cut(s) | 116, 470, 584 |
| XapI | RAATTY | 1 cut(s) | 155 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 47 |
| XspI | CTAG | 2 cut(s) | 263, 407 |
| Zsp2I | ATGCAT | 1 cut(s) | 637 |