MD09G1122500.v1.1

The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0000275
Physical Location & Seq
Reverse (-)
9443330 .. 9444730
1401 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1122500.v1.1.491

Sequence Viewer

Length: 939 bp
ATGCCGCTGACGTGTACATATCCTAATCCACATCATCTTCAACTCCCCGTTATAACATCCCTGACCTCTCCCTGGTTGAAAGCATCTCGGCAGGCTTGCTCAACACCACCAAAACTTCAAACAGAAAAAAAGCAGCAAGCAATGGCAACCTCTGCAATCCAACAATCAGCATTTGCTGGCCAGACTGCTTTGAAGCAGTCCAGTGAGCTCGTCCGAAAGATCGGCGGCCTTGGCGGCGGCCGCTTCTCCATGCGGCGCACCGTCAAAAGTGCCCCCCAGAGCATATGGTACGGCCCAGACCGCCCCAAGTACTTGGGACCATTCTCCGAGCAAACTCCGTCATACTTGACCGGTGAATTCCCCGGAGACTACGGATGGGACACTGCTGGACTATCTGCAGACCCCGAAACATTTGCCAAGAACCGTGAGCTTGAGGTGATCCACTCCAGATGGGCCATGCTTGGTGCACTGGGATGCGTCTTCCCAGAAATCTTGTCAAGGAATGGCGTCAAGTTCGGCGAGGCTGTCTGGTTCAAGGCTGGATCGCAAATCTTCTCTGAGGGCGGCCTTGACTACCTTGGCAACCCAAACCTTATCCATGCTCAGAGCATCTTGGCAATCTGGGCTGTCCAGGTCGTGCTCATGGGATTCATTGAGGGATACAGAGTTGGAGGAGGACCACTCGGTGAGGGACTAGACCCACTTTACCCAGGAGGGGCCTTTGACCCCCTTGGACTTGCTGATGATCCCGAAGCTTTTGCTGAACTGAAGGTGAAGGAACTTAAGAACGGGCGTCTGGCTATGACCTCAATGTTCGGATTCTTTGTTCAGGCTATTGTAACTGGAAAGGGACCGGTGGAGAACCTCTTCGACCACATCGCTGACCCAGTGGCCAACAACGCATGGGCTTACGCCACCAACTTCGTCCCTGGAAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006091 GO:0006950 GO:0008150 GO:0008152 GO:0009266 GO:0009269 GO:0009314 GO:0009409 GO:0009414 GO:0009415 GO:0009416 GO:0009503 GO:0009507 GO:0009517 GO:0009521 GO:0009522 GO:0009523 GO:0009526 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009637 GO:0009639 GO:0009642 GO:0009644 GO:0009645 GO:0009719 GO:0009725 GO:0009737 GO:0009765 GO:0009768 GO:0009769 GO:0009889 GO:0009891 GO:0009893 GO:0009941 GO:0009987 GO:0010033 GO:0010035 GO:0010114 GO:0010119 GO:0010218 GO:0010287 GO:0015979 GO:0016020 GO:0016168 GO:0019222 GO:0019684 GO:0019904 GO:0030076 GO:0030104 GO:0031090 GO:0031323 GO:0031325 GO:0031409 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0032870 GO:0032991 GO:0033993 GO:0034357 GO:0042221 GO:0042592 GO:0042651 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044436 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046906 GO:0048037 GO:0048518 GO:0048522 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055035 GO:0065007 GO:0065008 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0090333 GO:0097159 GO:0097305 GO:0097306 GO:0098588 GO:0098796 GO:0098805 GO:0098807 GO:1901363 GO:1901700 GO:1901701 GO:1903426 GO:1903428 GO:2000377 GO:2000379
KEGG Pathways
Metabolic & Signaling
ko00196 ko01100 map00196 map01100
Pfam Domains
Protein Families
Chloroa_b-bind

Protein Analysis

313

Amino Acids

33.74

Weight (kDa)

6.97

Isoelectric Point (pI)

44.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Chloroa_b-bind PF00504 113 - 279 6.9e-51 Chlorophyll A-B binding protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000275)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G05070 AT2G05100 AT2G05100 AT3G27690 AT3G27690
fragaria_vesca FvH4_3g37660 FvH4_6g32440 FvH4_6g38383 FvH4_6g38390 FvH4_6g38450 FvH4_6g38460 FvH4_6g40970 FvH4_6g41000
malus_domestica MD09G1122500.v1.1 MD09G1292900.v1.1 MD17G1109600.v1.1 MD17G1113400.v1.1 MD17G1137800.v1.1 MD17G1281900.v1.1
prunus_persica Prupe.3G004100_v2.0.a1 Prupe.3G174600_v2.0.a1 Prupe.3G174700_v2.0.a1 Prupe.3G201000_v2.0.a1 Prupe.3G201000_v2.0.a1
pyrus_communis pycom09g04690
rosa_chinensis RchiOBHm_Chr2g0138781 RchiOBHm_Chr2g0140601 RchiOBHm_Chr2g0140621 RchiOBHm_Chr2g0140661 RchiOBHm_Chr2g0140671 RchiOBHm_Chr2g0151701 RchiOBHm_Chr2g0156601 RchiOBHm_Chr2g0156611 RchiOBHm_Chr2g0156621 RchiOBHm_Chr3g0486251 RchiOBHm_Chr5g0067271 RchiOBHm_Chr5g0067731 RchiOBHm_Chr5g0067781 RchiOBHm_Chr5g0067851 RchiOBHm_Chr5g0067871 RchiOBHm_Chr5g0067881
rosa_laevigata RLG00000019760 RLG00000019883 RLG00000019890 RLG00000020570 RLG00000020571 RLG00000020572 RLG00000020573 RLG00000020923 RLG00000020924 RLG00000020925 RLG00000023090 RLG00000035922 RLG00000035943
rosa_multiflora Rmu_co7992426.1_g000001 Rmu_co8294383.1_g000001 Rmu_sc0000015.1_g000011 Rmu_sc0000435.1_g000050 Rmu_sc0000435.1_g000051 Rmu_sc0001857.1_g000019 Rmu_sc0003342.1_g000007 Rmu_sc0005294.1_g000040 Rmu_sc0005294.1_g000041 Rmu_sc0007131.1_g000005 Rmu_sc0007661.1_g000008 Rmu_sc0009883.1_g000012 Rmu_sc0011512.1_g000011 Rmu_sc0011512.1_g000012 Rmu_sc0011512.1_g000013 Rmu_sc0012576.1_g000001 Rmu_sc0014881.1_g000003 Rmu_sc0014881.1_g000004 Rmu_sc0014881.1_g000005 Rmu_ssc0000213.1_g000119
rosa_roxburghii Rroxscaffold_1G00013870 Rroxscaffold_2G00092910 Rroxscaffold_2G00092920 Rroxscaffold_2G00096220 Rroxscaffold_2G00096230 Rroxscaffold_2G00105960 Rroxscaffold_6G00395950
rosa_rugosa Rorug02G0428200 Rorug02G0428300 Rorug02G0454600 Rorug02G0454700 Rorug03G0224200 Rorug05G0383400 Rorug05G0385900
rosa_samantha Rh2AG402400 Rh2AG415500 Rh2AG489100 Rh2AG489200 Rh2AG489300 Rh2AG489400 Rh2AG520200 Rh2AG520300 Rh2AG520500 Rh2BG405200 Rh2BG501700 Rh2BG501800 Rh2BG533300 Rh2BG533500 Rh2BG533600 Rh2DG422600 Rh2DG434900 Rh2DG435000 Rh2DG435100 Rh2DG512800 Rh2DG512900 Rh2DG542100 Rh2DG542300 Rh2DG542400 Rh3AG274200 Rh3BG309500 Rh3CG308700 Rh5AG442900 Rh5AG444700 Rh5BG460100 Rh5DG475000 Rh5DG476700
rosa_wichuraiana Rw0G022540 Rw2G032710 Rw2G034000 Rw2G040110 Rw2G042910 Rw2G042920 Rw2G042930 Rw3G024310 Rw5G041390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 53
AciI CCGC 8 cut(s) 5, 225, 234, 237, 241, 253, 301, 564
AclWI GGATC 3 cut(s) 433, 550, 740
AcoI YGGCCR 3 cut(s) 178, 238, 891
AcsI RAATTY 1 cut(s) 356
AcuI CTGAAG 1 cut(s) 788
AcyI GRCGYC 2 cut(s) 507, 793
AdeI CACNNNGTG 1 cut(s) 686
AfaI GTAC 3 cut(s) 16, 290, 311
AfiI CCNNNNNNNGG 2 cut(s) 72, 715
AflII CTTAAG 1 cut(s) 782
AflIII ACRYGT 1 cut(s) 11
AgeI ACCGGT 2 cut(s) 350, 853
AgsI TTSAA 5 cut(s) 41, 79, 119, 193, 535
AjiI CACGTC 1 cut(s) 12
AjnI CCWGG 4 cut(s) 71, 630, 709, 928
AloI GAACNNNNNNTCC 2 cut(s) 810, 842
AluBI AGCT 3 cut(s) 208, 430, 755
AluI AGCT 3 cut(s) 208, 430, 755
Alw21I GWGCWC 3 cut(s) 210, 469, 642
Alw26I GTCTC 1 cut(s) 360
Alw44I GTGCAC 1 cut(s) 465
AlwI GGATC 3 cut(s) 433, 550, 740
AoxI GGCC 8 cut(s) 178, 226, 238, 292, 453, 565, 717, 891
ApaLI GTGCAC 1 cut(s) 465
ApeKI GCWGC 1 cut(s) 133
ApoI RAATTY 1 cut(s) 356
AsiGI ACCGGT 2 cut(s) 350, 853
Asp700I GAANNNNTTC 1 cut(s) 866
AspLEI GCGC 1 cut(s) 258
AspS9I GGNCC 6 cut(s) 293, 317, 453, 677, 717, 851
AsuC2I CCSGG 1 cut(s) 363
AsuHPI GGTGA 4 cut(s) 365, 448, 698, 784
AvaII GGWCC 3 cut(s) 317, 677, 851
BaeGI GKGCMC 2 cut(s) 274, 469
BalI TGGCCA 2 cut(s) 180, 893
BanII GRGCYC 1 cut(s) 210
BbsI GAAGAC 1 cut(s) 472
Bbv12I GWGCWC 3 cut(s) 210, 469, 642
BbvI GCAGC 1 cut(s) 145
BccI CCATC 2 cut(s) 369, 444
BceAI ACGGC 1 cut(s) 307
BcgI CGANNNNNNTGC 4 cut(s) 395, 429, 740, 774
BciT130I CCWGG 4 cut(s) 73, 632, 711, 930
BciVI GTATCC 1 cut(s) 653
BcnI CCSGG 1 cut(s) 363
BcoDI GTCTC 1 cut(s) 360
BfaI CTAG 1 cut(s) 695
BfmI CTRYAG 1 cut(s) 396
BfrI CTTAAG 1 cut(s) 782
BfuI GTATCC 1 cut(s) 653
BglI GCCNNNNNGGC 1 cut(s) 234
BisI GCNGC 8 cut(s) 5, 134, 226, 235, 238, 241, 254, 565
BlsI GCNGC 8 cut(s) 6, 135, 227, 236, 239, 242, 255, 566
BmcAI AGTACT 1 cut(s) 311
Bme1390I CCNGG 5 cut(s) 73, 363, 632, 711, 930
Bme18I GGWCC 3 cut(s) 317, 677, 851
BmgBI CACGTC 1 cut(s) 12
BmgT120I GGNCC 6 cut(s) 293, 317, 453, 677, 717, 851
BmiI GGNNCC 3 cut(s) 318, 718, 852
BmrFI CCNGG 5 cut(s) 73, 363, 632, 711, 930
BmrI ACTGGG 2 cut(s) 479, 881
BmsI GCATC 3 cut(s) 92, 464, 618
BmuI ACTGGG 2 cut(s) 479, 881
BpiI GAAGAC 1 cut(s) 472
BplI GAGNNNNNCTC 2 cut(s) 666, 698
BpmI CTGGAG 1 cut(s) 430
BpuEI CTTGAG 1 cut(s) 452
BpuMI CCSGG 1 cut(s) 363
BsaHI GRCGYC 2 cut(s) 507, 793
BsaJI CCNNGG 7 cut(s) 71, 229, 361, 577, 709, 730, 928
BsaWI WCCGGW 2 cut(s) 350, 853
Bsc4I CCNNNNNNNGG 2 cut(s) 72, 715
Bse118I RCCGGY 2 cut(s) 350, 853
Bse1I ACTGG 4 cut(s) 201, 474, 847, 887
Bse3DI GCAATG 1 cut(s) 147
BseBI CCWGG 4 cut(s) 73, 632, 711, 930
BseDI CCNNGG 7 cut(s) 71, 229, 361, 577, 709, 730, 928
BseGI GGATG 3 cut(s) 56, 380, 479
BseLI CCNNNNNNNGG 2 cut(s) 72, 715
BseMI GCAATG 1 cut(s) 147
BseMII CTCAG 2 cut(s) 549, 617
BseNI ACTGG 4 cut(s) 201, 474, 847, 887
BseRI GAGGAG 1 cut(s) 687
BseSI GKGCMC 2 cut(s) 274, 469
BseX3I CGGCCG 1 cut(s) 238
BseXI GCAGC 1 cut(s) 145
Bsh1285I CGRYCG 1 cut(s) 241
BshFI GGCC 8 cut(s) 180, 228, 240, 294, 455, 567, 719, 893
BshTI ACCGGT 2 cut(s) 350, 853
BsiEI CGRYCG 1 cut(s) 241
BsiHKAI GWGCWC 3 cut(s) 210, 469, 642
BsiSI CCGG 3 cut(s) 351, 363, 854
BslFI GGGAC 5 cut(s) 330, 392, 705, 864, 911
BslI CCNNNNNNNGG 2 cut(s) 72, 715
BsmAI GTCTC 1 cut(s) 360
BsmFI GGGAC 5 cut(s) 330, 392, 705, 864, 911
BsnI GGCC 8 cut(s) 180, 228, 240, 294, 455, 567, 719, 893
Bsp1286I GDGCHC 4 cut(s) 210, 274, 469, 642
Bsp1407I TGTACA 1 cut(s) 14
Bsp143I GATC 4 cut(s) 219, 438, 542, 745
BspACI CCGC 8 cut(s) 5, 225, 234, 237, 241, 253, 301, 564
BspANI GGCC 8 cut(s) 180, 228, 240, 294, 455, 567, 719, 893
BspCNI CTCAG 2 cut(s) 550, 616
BspLI GGNNCC 3 cut(s) 318, 718, 852
BspMAI CTGCAG 1 cut(s) 400
BspPI GGATC 3 cut(s) 433, 550, 740
BspTI CTTAAG 1 cut(s) 782
BsrDI GCAATG 1 cut(s) 147
BsrFI RCCGGY 2 cut(s) 350, 853
BsrGI TGTACA 1 cut(s) 14
BsrI ACTGG 4 cut(s) 201, 474, 847, 887
BssAI RCCGGY 2 cut(s) 350, 853
BssECI CCNNGG 7 cut(s) 71, 229, 361, 577, 709, 730, 928
BssMI GATC 4 cut(s) 219, 438, 542, 745
BssNI GRCGYC 2 cut(s) 507, 793
BssT1I CCWWGG 3 cut(s) 229, 577, 730
Bst2UI CCWGG 4 cut(s) 73, 632, 711, 930
Bst4CI ACNGT 2 cut(s) 262, 425
Bst6I CTCTTC 1 cut(s) 872
BstACI GRCGYC 2 cut(s) 507, 793
BstAFI CTTAAG 1 cut(s) 782
BstAPI GCANNNNNTGC 1 cut(s) 152
BstAUI TGTACA 1 cut(s) 14
BstC8I GCNNGC 4 cut(s) 93, 97, 138, 178
BstDEI CTNAG 2 cut(s) 558, 603
BstF5I GGATG 3 cut(s) 56, 380, 479
BstHHI GCGC 1 cut(s) 258
BstKTI GATC 4 cut(s) 222, 441, 545, 748
BstMAI GTCTC 1 cut(s) 360
BstMBI GATC 4 cut(s) 219, 438, 542, 745
BstMCI CGRYCG 1 cut(s) 241
BstMWI GCNNNNNNNGC 7 cut(s) 152, 231, 234, 240, 300, 623, 899
BstNI CCWGG 4 cut(s) 73, 632, 711, 930
BstSCI CCNGG 5 cut(s) 71, 361, 630, 709, 928
BstSFI CTRYAG 1 cut(s) 396
BstSLI GKGCMC 2 cut(s) 274, 469
BstV1I GCAGC 1 cut(s) 145
BstV2I GAAGAC 1 cut(s) 472
BstXI CCANNNNNNTGG 1 cut(s) 313
BstZI CGGCCG 1 cut(s) 238
BsuI GTATCC 1 cut(s) 653
BsuRI GGCC 8 cut(s) 180, 228, 240, 294, 455, 567, 719, 893
BtgZI GCGATG 1 cut(s) 862
BtrI CACGTC 1 cut(s) 12
BtsCI GGATG 3 cut(s) 56, 380, 479
BtsI GCAGTG 1 cut(s) 381
BtsIMutI CAGTG 4 cut(s) 208, 381, 467, 894
Cac8I GCNNGC 4 cut(s) 93, 97, 138, 178
CciNI GCGGCCGC 1 cut(s) 238
CfoI GCGC 1 cut(s) 258
Cfr10I RCCGGY 2 cut(s) 350, 853
Cfr13I GGNCC 6 cut(s) 293, 317, 453, 677, 717, 851
CseI GACGC 3 cut(s) 466, 496, 782
Csp6I GTAC 3 cut(s) 15, 289, 310
CspAI ACCGGT 2 cut(s) 350, 853
CviAII CATG 5 cut(s) 250, 457, 599, 643, 903
CviQI GTAC 3 cut(s) 15, 289, 310
DdeI CTNAG 2 cut(s) 558, 603
DpnI GATC 4 cut(s) 221, 440, 544, 747
DpnII GATC 4 cut(s) 219, 438, 542, 745
DraIII CACNNNGTG 1 cut(s) 686
EaeI YGGCCR 3 cut(s) 178, 238, 891
EagI CGGCCG 1 cut(s) 238
Eam1104I CTCTTC 1 cut(s) 872
EarI CTCTTC 1 cut(s) 872
Ecl136II GAGCTC 1 cut(s) 208
EclXI CGGCCG 1 cut(s) 238
Eco130I CCWWGG 3 cut(s) 229, 577, 730
Eco24I GRGCYC 1 cut(s) 210
Eco47I GGWCC 3 cut(s) 317, 677, 851
Eco52I CGGCCG 1 cut(s) 238
Eco53kI GAGCTC 1 cut(s) 208
Eco57I CTGAAG 1 cut(s) 788
EcoICRI GAGCTC 1 cut(s) 208
EcoO109I RGGNCCY 1 cut(s) 717
EcoRI GAATTC 1 cut(s) 356
EcoRII CCWGG 4 cut(s) 71, 630, 709, 928
EcoT14I CCWWGG 3 cut(s) 229, 577, 730
EcoT38I GRGCYC 1 cut(s) 210
ErhI CCWWGG 3 cut(s) 229, 577, 730
FaeI CATG 5 cut(s) 253, 460, 602, 646, 906
FaqI GGGAC 5 cut(s) 330, 392, 705, 864, 911
FatI CATG 5 cut(s) 249, 456, 598, 642, 902
FauNDI CATATG 1 cut(s) 284
Fnu4HI GCNGC 8 cut(s) 5, 134, 226, 235, 238, 241, 254, 565
FokI GGATG 3 cut(s) 43, 387, 486
FriOI GRGCYC 1 cut(s) 210
Fsp4HI GCNGC 8 cut(s) 5, 134, 226, 235, 238, 241, 254, 565
FspBI CTAG 1 cut(s) 695
GlaI GCGC 1 cut(s) 257
GluI GCNGC 8 cut(s) 5, 134, 226, 235, 238, 241, 254, 565
GsuI CTGGAG 1 cut(s) 430
HaeIII GGCC 8 cut(s) 180, 228, 240, 294, 455, 567, 719, 893
HapII CCGG 3 cut(s) 351, 363, 854
HgaI GACGC 3 cut(s) 466, 496, 782
HhaI GCGC 1 cut(s) 258
Hin1I GRCGYC 2 cut(s) 507, 793
Hin1II CATG 5 cut(s) 253, 460, 602, 646, 906
Hin6I GCGC 1 cut(s) 256
HinP1I GCGC 1 cut(s) 256
HindIII AAGCTT 1 cut(s) 753
HinfI GANTC 2 cut(s) 648, 819
HpaII CCGG 3 cut(s) 351, 363, 854
HphI GGTGA 4 cut(s) 365, 448, 698, 784
Hpy166II GTNNAC 2 cut(s) 15, 467
Hpy188I TCNGA 5 cut(s) 215, 328, 559, 606, 818
Hpy188III TCNNGA 2 cut(s) 447, 749
Hpy8I GTNNAC 2 cut(s) 15, 467
HpyAV CCTTC 2 cut(s) 763, 769
HpyCH4III ACNGT 2 cut(s) 262, 425
HpyCH4IV ACGT 1 cut(s) 11
HpyCH4V TGCA 3 cut(s) 155, 398, 467
HpyF10VI GCNNNNNNNGC 7 cut(s) 152, 231, 234, 240, 300, 623, 899
HpyF3I CTNAG 2 cut(s) 558, 603
HpySE526I ACGT 1 cut(s) 11
Hsp92I GRCGYC 2 cut(s) 507, 793
Hsp92II CATG 5 cut(s) 253, 460, 602, 646, 906
HspAI GCGC 1 cut(s) 256
Kzo9I GATC 4 cut(s) 219, 438, 542, 745
Lsp1109I GCAGC 1 cut(s) 145
LweI GCATC 3 cut(s) 92, 464, 618
MaeI CTAG 1 cut(s) 695
MaeII ACGT 1 cut(s) 11
MaeIII GTNAC 1 cut(s) 838
MalI GATC 4 cut(s) 221, 440, 544, 747
MboI GATC 4 cut(s) 219, 438, 542, 745
MboII GAAGA 4 cut(s) 29, 472, 544, 859
MhlI GDGCHC 4 cut(s) 210, 274, 469, 642
MlsI TGGCCA 2 cut(s) 180, 893
MluCI AATT 1 cut(s) 356
MluNI TGGCCA 2 cut(s) 180, 893
MmeI TCCRAC 2 cut(s) 184, 649
Mox20I TGGCCA 2 cut(s) 180, 893
MroXI GAANNNNTTC 1 cut(s) 866
MscI TGGCCA 2 cut(s) 180, 893
MseI TTAA 1 cut(s) 783
MslI CAYNNNNRTG 1 cut(s) 472
Msp20I TGGCCA 2 cut(s) 180, 893
MspA1I CMGCKG 1 cut(s) 7
MspCI CTTAAG 1 cut(s) 782
MspI CCGG 3 cut(s) 351, 363, 854
MspR9I CCNGG 5 cut(s) 73, 363, 632, 711, 930
MvaI CCWGG 4 cut(s) 73, 632, 711, 930
MwoI GCNNNNNNNGC 7 cut(s) 152, 231, 234, 240, 300, 623, 899
NciI CCSGG 1 cut(s) 363
NdeI CATATG 1 cut(s) 284
NdeII GATC 4 cut(s) 219, 438, 542, 745
NlaIII CATG 5 cut(s) 253, 460, 602, 646, 906
NlaIV GGNNCC 3 cut(s) 318, 718, 852
NmeAIII GCCGAG 1 cut(s) 67
NotI GCGGCCGC 1 cut(s) 238
PdmI GAANNNNTTC 1 cut(s) 866
PfeI GAWTC 2 cut(s) 648, 819
PinAI ACCGGT 2 cut(s) 350, 853
PkrI GCNGC 8 cut(s) 6, 135, 227, 236, 239, 242, 255, 566
PsiI TTATAA 1 cut(s) 53
Psp124BI GAGCTC 1 cut(s) 210
Psp6I CCWGG 4 cut(s) 71, 630, 709, 928
PspGI CCWGG 4 cut(s) 71, 630, 709, 928
PspN4I GGNNCC 3 cut(s) 318, 718, 852
PspPI GGNCC 6 cut(s) 293, 317, 453, 677, 717, 851
PstI CTGCAG 1 cut(s) 400
RsaI GTAC 3 cut(s) 16, 290, 311
RsaNI GTAC 3 cut(s) 15, 289, 310
RseI CAYNNNNRTG 1 cut(s) 472
SacI GAGCTC 1 cut(s) 210
SaqAI TTAA 1 cut(s) 783
SatI GCNGC 8 cut(s) 5, 134, 226, 235, 238, 241, 254, 565
Sau3AI GATC 4 cut(s) 219, 438, 542, 745
Sau96I GGNCC 6 cut(s) 293, 317, 453, 677, 717, 851
ScaI AGTACT 1 cut(s) 311
ScrFI CCNGG 5 cut(s) 73, 363, 632, 711, 930
SduI GDGCHC 4 cut(s) 210, 274, 469, 642
SfaNI GCATC 3 cut(s) 92, 464, 618
SfcI CTRYAG 1 cut(s) 396
SinI GGWCC 3 cut(s) 317, 677, 851
SmiMI CAYNNNNRTG 1 cut(s) 472
SmlI CTYRAG 2 cut(s) 431, 782
SmoI CTYRAG 2 cut(s) 431, 782
Sse9I AATT 1 cut(s) 356
SsiI CCGC 8 cut(s) 5, 225, 234, 237, 241, 253, 301, 564
SspMI CTAG 1 cut(s) 695
SstI GAGCTC 1 cut(s) 210
StyD4I CCNGG 5 cut(s) 71, 361, 630, 709, 928
StyI CCWWGG 3 cut(s) 229, 577, 730
TaaI ACNGT 2 cut(s) 262, 425
TaiI ACGT 1 cut(s) 14
TaqI TCGA 1 cut(s) 870
TasI AATT 1 cut(s) 356
TatI WGTACW 2 cut(s) 14, 309
TauI GCSGC 7 cut(s) 7, 228, 237, 240, 243, 256, 567
TfiI GAWTC 2 cut(s) 648, 819
Tru1I TTAA 1 cut(s) 783
Tru9I TTAA 1 cut(s) 783
TscAI CASTG 4 cut(s) 208, 388, 474, 894
TseI GCWGC 1 cut(s) 133
TspDTI ATGAA 1 cut(s) 640
TspGWI ACGGA 2 cut(s) 327, 387
TspRI CASTG 4 cut(s) 208, 388, 474, 894
Vha464I CTTAAG 1 cut(s) 782
VneI GTGCAC 1 cut(s) 465
VpaK11BI GGWCC 3 cut(s) 317, 677, 851
XapI RAATTY 1 cut(s) 356
XmnI GAANNNNTTC 1 cut(s) 866
XspI CTAG 1 cut(s) 695
ZrmI AGTACT 1 cut(s) 311
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.