The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Chloroa_b-bind | PF00504 | 67 - 234 | 3.6e-50 | Chlorophyll A-B binding protein |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 107 |
| AccI | GTMKAC | 1 cut(s) | 561 |
| AciI | CCGC | 3 cut(s) | 263, 364, 515 |
| AclWI | GGATC | 5 cut(s) | 260, 273, 584, 605, 743 |
| AcoI | YGGCCR | 1 cut(s) | 43 |
| AcuI | CTGAAG | 1 cut(s) | 627 |
| AfaI | GTAC | 2 cut(s) | 176, 572 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 88, 155, 191, 327 |
| AflII | CTTAAG | 1 cut(s) | 632 |
| AgsI | TTSAA | 3 cut(s) | 400, 521, 725 |
| AjnI | CCWGG | 1 cut(s) | 574 |
| AluBI | AGCT | 7 cut(s) | 41, 50, 58, 295, 389, 456, 646 |
| AluI | AGCT | 7 cut(s) | 41, 50, 58, 295, 389, 456, 646 |
| Alw26I | GTCTC | 1 cut(s) | 266 |
| AlwI | GGATC | 5 cut(s) | 260, 273, 584, 605, 743 |
| Ama87I | CYCGRG | 2 cut(s) | 227, 269 |
| AoxI | GGCC | 7 cut(s) | 43, 91, 181, 318, 330, 402, 542 |
| ApaI | GGGCCC | 1 cut(s) | 185 |
| ApeKI | GCWGC | 1 cut(s) | 144 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 119, 151 |
| AspLEI | GCGC | 1 cut(s) | 108 |
| AspS9I | GGNCC | 9 cut(s) | 91, 163, 181, 182, 318, 330, 489, 542, 716 |
| AsuC2I | CCSGG | 3 cut(s) | 228, 229, 795 |
| AsuHPI | GGTGA | 6 cut(s) | 91, 98, 206, 563, 649, 697 |
| AvaI | CYCGRG | 2 cut(s) | 227, 269 |
| AvaII | GGWCC | 3 cut(s) | 163, 489, 716 |
| BaeGI | GKGCMC | 1 cut(s) | 185 |
| BalI | TGGCCA | 1 cut(s) | 45 |
| BamHI | GGATCC | 1 cut(s) | 265 |
| BanII | GRGCYC | 2 cut(s) | 185, 412 |
| BbvI | GCAGC | 1 cut(s) | 156 |
| BccI | CCATC | 3 cut(s) | 211, 309, 502 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 260, 294 |
| BciT130I | CCWGG | 1 cut(s) | 576 |
| BcnI | CCSGG | 3 cut(s) | 228, 229, 795 |
| BcoDI | GTCTC | 1 cut(s) | 266 |
| BfaI | CTAG | 2 cut(s) | 38, 359 |
| BfmI | CTRYAG | 2 cut(s) | 114, 526 |
| BfrI | CTTAAG | 1 cut(s) | 632 |
| BisI | GCNGC | 1 cut(s) | 145 |
| BlsI | GCNGC | 1 cut(s) | 146 |
| BmcAI | AGTACT | 1 cut(s) | 176 |
| Bme1390I | CCNGG | 4 cut(s) | 228, 229, 576, 795 |
| Bme18I | GGWCC | 3 cut(s) | 163, 489, 716 |
| BmeT110I | CYCGRG | 2 cut(s) | 227, 269 |
| BmgT120I | GGNCC | 9 cut(s) | 91, 163, 181, 182, 318, 330, 489, 542, 716 |
| BmiI | GGNNCC | 6 cut(s) | 183, 201, 267, 331, 409, 717 |
| BmrFI | CCNGG | 4 cut(s) | 228, 229, 576, 795 |
| Bpu10I | CCTNAGC | 1 cut(s) | 452 |
| BpuEI | CTTGAG | 1 cut(s) | 317 |
| BpuMI | CCSGG | 3 cut(s) | 228, 229, 795 |
| BsaI | GGTCTC | 1 cut(s) | 266 |
| BsaJI | CCNNGG | 6 cut(s) | 82, 149, 227, 228, 333, 574 |
| BsaWI | WCCGGW | 2 cut(s) | 191, 707 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 88, 155, 191, 327 |
| Bse118I | RCCGGY | 1 cut(s) | 536 |
| Bse3DI | GCAATG | 2 cut(s) | 21, 373 |
| BseBI | CCWGG | 1 cut(s) | 576 |
| BseDI | CCNNGG | 6 cut(s) | 82, 149, 227, 228, 333, 574 |
| BseGI | GGATG | 1 cut(s) | 303 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 88, 155, 191, 327 |
| BseMI | GCAATG | 2 cut(s) | 21, 373 |
| BseMII | CTCAG | 2 cut(s) | 73, 443 |
| BseRI | GAGGAG | 1 cut(s) | 16 |
| BseSI | GKGCMC | 1 cut(s) | 185 |
| BseXI | GCAGC | 1 cut(s) | 156 |
| BseYI | CCCAGC | 1 cut(s) | 251 |
| BshFI | GGCC | 7 cut(s) | 45, 93, 183, 320, 332, 404, 544 |
| BsiHKCI | CYCGRG | 2 cut(s) | 227, 269 |
| BsiSI | CCGG | 6 cut(s) | 192, 228, 405, 537, 708, 795 |
| BslFI | GGGAC | 4 cut(s) | 48, 245, 257, 729 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 88, 155, 191, 327 |
| BsmAI | GTCTC | 1 cut(s) | 266 |
| BsmFI | GGGAC | 4 cut(s) | 48, 245, 257, 729 |
| BsnI | GGCC | 7 cut(s) | 45, 93, 183, 320, 332, 404, 544 |
| Bso31I | GGTCTC | 1 cut(s) | 266 |
| BsoBI | CYCGRG | 2 cut(s) | 227, 269 |
| Bsp120I | GGGCCC | 1 cut(s) | 181 |
| Bsp1286I | GDGCHC | 2 cut(s) | 185, 412 |
| Bsp143I | GATC | 4 cut(s) | 265, 589, 610, 748 |
| BspACI | CCGC | 3 cut(s) | 263, 364, 515 |
| BspANI | GGCC | 7 cut(s) | 45, 93, 183, 320, 332, 404, 544 |
| BspCNI | CTCAG | 2 cut(s) | 72, 444 |
| BspLI | GGNNCC | 6 cut(s) | 183, 201, 267, 331, 409, 717 |
| BspPI | GGATC | 5 cut(s) | 260, 273, 584, 605, 743 |
| BspTI | CTTAAG | 1 cut(s) | 632 |
| BspTNI | GGTCTC | 1 cut(s) | 266 |
| BsrDI | GCAATG | 2 cut(s) | 21, 373 |
| BsrFI | RCCGGY | 1 cut(s) | 536 |
| BssAI | RCCGGY | 1 cut(s) | 536 |
| BssECI | CCNNGG | 6 cut(s) | 82, 149, 227, 228, 333, 574 |
| BssMI | GATC | 4 cut(s) | 265, 589, 610, 748 |
| BssT1I | CCWWGG | 3 cut(s) | 82, 149, 333 |
| Bst2UI | CCWGG | 1 cut(s) | 576 |
| Bst4CI | ACNGT | 3 cut(s) | 115, 167, 239 |
| BstAFI | CTTAAG | 1 cut(s) | 632 |
| BstC8I | GCNNGC | 3 cut(s) | 43, 364, 696 |
| BstDEI | CTNAG | 3 cut(s) | 59, 452, 457 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 86 |
| BstF5I | GGATG | 1 cut(s) | 303 |
| BstHHI | GCGC | 1 cut(s) | 108 |
| BstKTI | GATC | 4 cut(s) | 268, 592, 613, 751 |
| BstMAI | GTCTC | 1 cut(s) | 266 |
| BstMBI | GATC | 4 cut(s) | 265, 589, 610, 748 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 11, 47 |
| BstNI | CCWGG | 1 cut(s) | 576 |
| BstSCI | CCNGG | 4 cut(s) | 226, 227, 574, 793 |
| BstSFI | CTRYAG | 2 cut(s) | 114, 526 |
| BstSLI | GKGCMC | 1 cut(s) | 185 |
| BstV1I | GCAGC | 1 cut(s) | 156 |
| BstX2I | RGATCY | 2 cut(s) | 265, 610 |
| BstYI | RGATCY | 2 cut(s) | 265, 610 |
| BsuRI | GGCC | 7 cut(s) | 45, 93, 183, 320, 332, 404, 544 |
| BtsCI | GGATG | 1 cut(s) | 303 |
| BtsI | GCAGTG | 1 cut(s) | 246 |
| BtsIMutI | CAGTG | 1 cut(s) | 246 |
| Cac8I | GCNNGC | 3 cut(s) | 43, 364, 696 |
| CfoI | GCGC | 1 cut(s) | 108 |
| Cfr10I | RCCGGY | 1 cut(s) | 536 |
| Cfr13I | GGNCC | 9 cut(s) | 91, 163, 181, 182, 318, 330, 489, 542, 716 |
| Cfr9I | CCCGGG | 1 cut(s) | 227 |
| CpoI | CGGWCCG | 1 cut(s) | 163 |
| Csp6I | GTAC | 2 cut(s) | 175, 571 |
| CspI | CGGWCCG | 1 cut(s) | 163 |
| CviAII | CATG | 4 cut(s) | 103, 322, 464, 667 |
| CviQI | GTAC | 2 cut(s) | 175, 571 |
| DdeI | CTNAG | 3 cut(s) | 59, 452, 457 |
| DpnI | GATC | 4 cut(s) | 267, 591, 612, 750 |
| DpnII | GATC | 4 cut(s) | 265, 589, 610, 748 |
| EaeI | YGGCCR | 1 cut(s) | 43 |
| Eco130I | CCWWGG | 3 cut(s) | 82, 149, 333 |
| Eco24I | GRGCYC | 2 cut(s) | 185, 412 |
| Eco31I | GGTCTC | 1 cut(s) | 266 |
| Eco47I | GGWCC | 3 cut(s) | 163, 489, 716 |
| Eco57I | CTGAAG | 1 cut(s) | 627 |
| Eco88I | CYCGRG | 2 cut(s) | 227, 269 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 86 |
| EcoO109I | RGGNCCY | 1 cut(s) | 330 |
| EcoRII | CCWGG | 1 cut(s) | 574 |
| EcoT14I | CCWWGG | 3 cut(s) | 82, 149, 333 |
| EcoT38I | GRGCYC | 2 cut(s) | 185, 412 |
| ErhI | CCWWGG | 3 cut(s) | 82, 149, 333 |
| FaeI | CATG | 4 cut(s) | 106, 325, 467, 670 |
| FaiI | YATR | 9 cut(s) | 104, 156, 323, 465, 528, 668, 677, 775, 777 |
| FaqI | GGGAC | 4 cut(s) | 48, 245, 257, 729 |
| FatI | CATG | 4 cut(s) | 102, 321, 463, 666 |
| FauI | CCCGC | 1 cut(s) | 371 |
| FauNDI | CATATG | 1 cut(s) | 775 |
| FblI | GTMKAC | 1 cut(s) | 561 |
| Fnu4HI | GCNGC | 1 cut(s) | 145 |
| FokI | GGATG | 1 cut(s) | 290 |
| FriOI | GRGCYC | 2 cut(s) | 185, 412 |
| Fsp4HI | GCNGC | 1 cut(s) | 145 |
| FspBI | CTAG | 2 cut(s) | 38, 359 |
| FspI | TGCGCA | 1 cut(s) | 107 |
| GlaI | GCGC | 1 cut(s) | 107 |
| GluI | GCNGC | 1 cut(s) | 145 |
| GsaI | CCCAGC | 1 cut(s) | 255 |
| HaeIII | GGCC | 7 cut(s) | 45, 93, 183, 320, 332, 404, 544 |
| HapII | CCGG | 6 cut(s) | 192, 228, 405, 537, 708, 795 |
| HhaI | GCGC | 1 cut(s) | 108 |
| Hin1II | CATG | 4 cut(s) | 106, 325, 467, 670 |
| Hin6I | GCGC | 1 cut(s) | 106 |
| HinP1I | GCGC | 1 cut(s) | 106 |
| HincII | GTYRAC | 1 cut(s) | 757 |
| HindII | GTYRAC | 1 cut(s) | 757 |
| HinfI | GANTC | 3 cut(s) | 96, 372, 600 |
| HpaI | GTTAAC | 1 cut(s) | 757 |
| HpaII | CCGG | 6 cut(s) | 192, 228, 405, 537, 708, 795 |
| HphI | GGTGA | 6 cut(s) | 91, 98, 206, 563, 649, 697 |
| Hpy166II | GTNNAC | 2 cut(s) | 562, 757 |
| Hpy188I | TCNGA | 1 cut(s) | 163 |
| Hpy188III | TCNNGA | 5 cut(s) | 269, 290, 312, 505, 614 |
| Hpy8I | GTNNAC | 2 cut(s) | 562, 757 |
| HpyAV | CCTTC | 4 cut(s) | 42, 76, 515, 634 |
| HpyCH4III | ACNGT | 3 cut(s) | 115, 167, 239 |
| HpyCH4V | TGCA | 3 cut(s) | 626, 694, 779 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 11, 47 |
| HpyF3I | CTNAG | 3 cut(s) | 59, 452, 457 |
| Hsp92II | CATG | 4 cut(s) | 106, 325, 467, 670 |
| HspAI | GCGC | 1 cut(s) | 106 |
| KspAI | GTTAAC | 1 cut(s) | 757 |
| Kzo9I | GATC | 4 cut(s) | 265, 589, 610, 748 |
| LmnI | GCTCC | 3 cut(s) | 205, 407, 643 |
| Lsp1109I | GCAGC | 1 cut(s) | 156 |
| MaeI | CTAG | 2 cut(s) | 38, 359 |
| MaeIII | GTNAC | 2 cut(s) | 97, 703 |
| MalI | GATC | 4 cut(s) | 267, 591, 612, 750 |
| MboI | GATC | 4 cut(s) | 265, 589, 610, 748 |
| MboII | GAAGA | 1 cut(s) | 620 |
| MfeI | CAATTG | 1 cut(s) | 720 |
| MflI | RGATCY | 2 cut(s) | 265, 610 |
| MhlI | GDGCHC | 2 cut(s) | 185, 412 |
| MlsI | TGGCCA | 1 cut(s) | 45 |
| MluCI | AATT | 3 cut(s) | 483, 531, 720 |
| MluNI | TGGCCA | 1 cut(s) | 45 |
| MlyI | GAGTC | 3 cut(s) | 105, 381, 594 |
| Mox20I | TGGCCA | 1 cut(s) | 45 |
| MscI | TGGCCA | 1 cut(s) | 45 |
| MseI | TTAA | 3 cut(s) | 171, 633, 756 |
| MslI | CAYNNNNRTG | 1 cut(s) | 506 |
| Msp20I | TGGCCA | 1 cut(s) | 45 |
| MspA1I | CMGCKG | 1 cut(s) | 263 |
| MspCI | CTTAAG | 1 cut(s) | 632 |
| MspI | CCGG | 6 cut(s) | 192, 228, 405, 537, 708, 795 |
| MspR9I | CCNGG | 4 cut(s) | 228, 229, 576, 795 |
| MunI | CAATTG | 1 cut(s) | 720 |
| MvaI | CCWGG | 1 cut(s) | 576 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 11, 47 |
| NciI | CCSGG | 3 cut(s) | 228, 229, 795 |
| NdeI | CATATG | 1 cut(s) | 775 |
| NdeII | GATC | 4 cut(s) | 265, 589, 610, 748 |
| NlaIII | CATG | 4 cut(s) | 106, 325, 467, 670 |
| NlaIV | GGNNCC | 6 cut(s) | 183, 201, 267, 331, 409, 717 |
| NmeAIII | GCCGAG | 1 cut(s) | 119 |
| NmuCI | GTSAC | 2 cut(s) | 97, 703 |
| NsbI | TGCGCA | 1 cut(s) | 107 |
| PfoI | TCCNGGA | 1 cut(s) | 793 |
| PkrI | GCNGC | 1 cut(s) | 146 |
| PleI | GAGTC | 3 cut(s) | 104, 380, 594 |
| PpsI | GAGTC | 3 cut(s) | 104, 380, 594 |
| Psp6I | CCWGG | 1 cut(s) | 574 |
| PspFI | CCCAGC | 1 cut(s) | 251 |
| PspGI | CCWGG | 1 cut(s) | 574 |
| PspN4I | GGNNCC | 6 cut(s) | 183, 201, 267, 331, 409, 717 |
| PspOMI | GGGCCC | 1 cut(s) | 181 |
| PspPI | GGNCC | 9 cut(s) | 91, 163, 181, 182, 318, 330, 489, 542, 716 |
| PsuI | RGATCY | 2 cut(s) | 265, 610 |
| RsaI | GTAC | 2 cut(s) | 176, 572 |
| RsaNI | GTAC | 2 cut(s) | 175, 571 |
| RseI | CAYNNNNRTG | 1 cut(s) | 506 |
| Rsr2I | CGGWCCG | 1 cut(s) | 163 |
| RsrII | CGGWCCG | 1 cut(s) | 163 |
| SaqAI | TTAA | 3 cut(s) | 171, 633, 756 |
| SatI | GCNGC | 1 cut(s) | 145 |
| Sau3AI | GATC | 4 cut(s) | 265, 589, 610, 748 |
| Sau96I | GGNCC | 9 cut(s) | 91, 163, 181, 182, 318, 330, 489, 542, 716 |
| ScaI | AGTACT | 1 cut(s) | 176 |
| SchI | GAGTC | 3 cut(s) | 105, 381, 594 |
| ScrFI | CCNGG | 4 cut(s) | 228, 229, 576, 795 |
| SduI | GDGCHC | 2 cut(s) | 185, 412 |
| SfcI | CTRYAG | 2 cut(s) | 114, 526 |
| SinI | GGWCC | 3 cut(s) | 163, 489, 716 |
| SmaI | CCCGGG | 1 cut(s) | 229 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 506 |
| SmlI | CTYRAG | 2 cut(s) | 296, 632 |
| SmoI | CTYRAG | 2 cut(s) | 296, 632 |
| Sse9I | AATT | 3 cut(s) | 483, 531, 720 |
| SsiI | CCGC | 3 cut(s) | 263, 364, 515 |
| SspMI | CTAG | 2 cut(s) | 38, 359 |
| StyD4I | CCNGG | 4 cut(s) | 226, 227, 574, 793 |
| StyI | CCWWGG | 3 cut(s) | 82, 149, 333 |
| TaaI | ACNGT | 3 cut(s) | 115, 167, 239 |
| TaqI | TCGA | 1 cut(s) | 125 |
| TasI | AATT | 3 cut(s) | 483, 531, 720 |
| TatI | WGTACW | 1 cut(s) | 174 |
| Tru1I | TTAA | 3 cut(s) | 171, 633, 756 |
| Tru9I | TTAA | 3 cut(s) | 171, 633, 756 |
| TscAI | CASTG | 1 cut(s) | 253 |
| TseFI | GTSAC | 2 cut(s) | 97, 703 |
| TseI | GCWGC | 1 cut(s) | 144 |
| Tsp45I | GTSAC | 2 cut(s) | 97, 703 |
| TspMI | CCCGGG | 1 cut(s) | 227 |
| TspRI | CASTG | 1 cut(s) | 253 |
| Vha464I | CTTAAG | 1 cut(s) | 632 |
| VpaK11BI | GGWCC | 3 cut(s) | 163, 489, 716 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 86 |
| XmaI | CCCGGG | 1 cut(s) | 227 |
| XmiI | GTMKAC | 1 cut(s) | 561 |
| XspI | CTAG | 2 cut(s) | 38, 359 |
| ZrmI | AGTACT | 1 cut(s) | 176 |