The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Chloroa_b-bind | PF00504 | 62 - 133 | 8.1e-16 | Chlorophyll A-B binding protein |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 99 |
| AclWI | GGATC | 1 cut(s) | 245 |
| AcsI | RAATTY | 1 cut(s) | 206 |
| AfaI | GTAC | 1 cut(s) | 140 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 157 |
| AgsI | TTSAA | 5 cut(s) | 32, 40, 297, 385, 406 |
| AluBI | AGCT | 6 cut(s) | 26, 35, 43, 280, 374, 395 |
| AluI | AGCT | 6 cut(s) | 26, 35, 43, 280, 374, 395 |
| Alw21I | GWGCWC | 3 cut(s) | 282, 319, 397 |
| Alw26I | GTCTC | 1 cut(s) | 251 |
| AlwI | GGATC | 1 cut(s) | 245 |
| Ama87I | CYCGRG | 1 cut(s) | 254 |
| AoxI | GGCC | 3 cut(s) | 76, 142, 166 |
| ApaI | GGGCCC | 1 cut(s) | 170 |
| ApeKI | GCWGC | 1 cut(s) | 101 |
| ApoI | RAATTY | 1 cut(s) | 206 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 104, 136 |
| AspS9I | GGNCC | 4 cut(s) | 76, 143, 166, 167 |
| AsuHPI | GGTGA | 4 cut(s) | 76, 83, 227, 415 |
| AvaI | CYCGRG | 1 cut(s) | 254 |
| BaeGI | GKGCMC | 1 cut(s) | 170 |
| BanII | GRGCYC | 4 cut(s) | 170, 243, 282, 397 |
| BbsI | GAAGAC | 1 cut(s) | 322 |
| Bbv12I | GWGCWC | 3 cut(s) | 282, 319, 397 |
| BbvI | GCAGC | 1 cut(s) | 113 |
| BccI | CCATC | 1 cut(s) | 196 |
| BceAI | ACGGC | 2 cut(s) | 157, 249 |
| BclI | TGATCA | 1 cut(s) | 420 |
| BcoDI | GTCTC | 1 cut(s) | 251 |
| BfaI | CTAG | 3 cut(s) | 23, 177, 320 |
| BisI | GCNGC | 1 cut(s) | 102 |
| BlsI | GCNGC | 1 cut(s) | 103 |
| BmeT110I | CYCGRG | 1 cut(s) | 254 |
| BmgT120I | GGNCC | 4 cut(s) | 76, 143, 166, 167 |
| BmiI | GGNNCC | 2 cut(s) | 168, 186 |
| BpiI | GAAGAC | 1 cut(s) | 322 |
| BpmI | CTGGAG | 2 cut(s) | 222, 411 |
| BpuEI | CTTGAG | 1 cut(s) | 266 |
| BsaI | GGTCTC | 1 cut(s) | 251 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 360, 390 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 157 |
| Bse1I | ACTGG | 1 cut(s) | 205 |
| Bse3DI | GCAATG | 1 cut(s) | 358 |
| BseGI | GGATG | 1 cut(s) | 288 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 157 |
| BseMI | GCAATG | 1 cut(s) | 358 |
| BseMII | CTCAG | 2 cut(s) | 258, 325 |
| BseNI | ACTGG | 1 cut(s) | 205 |
| BseSI | GKGCMC | 1 cut(s) | 170 |
| BseXI | GCAGC | 1 cut(s) | 113 |
| BseYI | CCCAGC | 1 cut(s) | 236 |
| BshFI | GGCC | 3 cut(s) | 78, 144, 168 |
| BsiHKAI | GWGCWC | 3 cut(s) | 282, 319, 397 |
| BsiHKCI | CYCGRG | 1 cut(s) | 254 |
| BslFI | GGGAC | 1 cut(s) | 242 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 157 |
| BsmAI | GTCTC | 1 cut(s) | 251 |
| BsmFI | GGGAC | 1 cut(s) | 242 |
| BsnI | GGCC | 3 cut(s) | 78, 144, 168 |
| Bso31I | GGTCTC | 1 cut(s) | 251 |
| BsoBI | CYCGRG | 1 cut(s) | 254 |
| Bsp120I | GGGCCC | 1 cut(s) | 166 |
| Bsp1286I | GDGCHC | 5 cut(s) | 170, 243, 282, 319, 397 |
| Bsp143I | GATC | 2 cut(s) | 250, 420 |
| BspACI | CCGC | 1 cut(s) | 99 |
| BspANI | GGCC | 3 cut(s) | 78, 144, 168 |
| BspCNI | CTCAG | 2 cut(s) | 257, 324 |
| BspLI | GGNNCC | 2 cut(s) | 168, 186 |
| BspPI | GGATC | 1 cut(s) | 245 |
| BspTNI | GGTCTC | 1 cut(s) | 251 |
| BsrDI | GCAATG | 1 cut(s) | 358 |
| BsrI | ACTGG | 1 cut(s) | 205 |
| BssMI | GATC | 2 cut(s) | 250, 420 |
| Bst4CI | ACNGT | 3 cut(s) | 152, 224, 275 |
| BstC8I | GCNNGC | 2 cut(s) | 45, 349 |
| BstDEI | CTNAG | 2 cut(s) | 244, 311 |
| BstF5I | GGATG | 1 cut(s) | 288 |
| BstKTI | GATC | 2 cut(s) | 253, 423 |
| BstMAI | GTCTC | 1 cut(s) | 251 |
| BstMBI | GATC | 2 cut(s) | 250, 420 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 32 |
| BstSLI | GKGCMC | 1 cut(s) | 170 |
| BstV1I | GCAGC | 1 cut(s) | 113 |
| BstV2I | GAAGAC | 1 cut(s) | 322 |
| BstX2I | RGATCY | 1 cut(s) | 250 |
| BstYI | RGATCY | 1 cut(s) | 250 |
| BsuRI | GGCC | 3 cut(s) | 78, 144, 168 |
| BtsCI | GGATG | 1 cut(s) | 288 |
| BtsIMutI | CAGTG | 2 cut(s) | 198, 319 |
| Cac8I | GCNNGC | 2 cut(s) | 45, 349 |
| Cfr13I | GGNCC | 4 cut(s) | 76, 143, 166, 167 |
| Csp6I | GTAC | 1 cut(s) | 139 |
| CviAII | CATG | 2 cut(s) | 88, 135 |
| CviQI | GTAC | 1 cut(s) | 139 |
| DdeI | CTNAG | 2 cut(s) | 244, 311 |
| DpnI | GATC | 2 cut(s) | 252, 422 |
| DpnII | GATC | 2 cut(s) | 250, 420 |
| Ecl136II | GAGCTC | 2 cut(s) | 280, 395 |
| Eco24I | GRGCYC | 4 cut(s) | 170, 243, 282, 397 |
| Eco31I | GGTCTC | 1 cut(s) | 251 |
| Eco53kI | GAGCTC | 2 cut(s) | 280, 395 |
| Eco88I | CYCGRG | 1 cut(s) | 254 |
| EcoICRI | GAGCTC | 2 cut(s) | 280, 395 |
| EcoO109I | RGGNCCY | 1 cut(s) | 167 |
| EcoRI | GAATTC | 1 cut(s) | 206 |
| EcoT38I | GRGCYC | 4 cut(s) | 170, 243, 282, 397 |
| FaeI | CATG | 2 cut(s) | 91, 138 |
| FaiI | YATR | 3 cut(s) | 89, 136, 308 |
| FaqI | GGGAC | 1 cut(s) | 242 |
| FatI | CATG | 2 cut(s) | 87, 134 |
| FbaI | TGATCA | 1 cut(s) | 420 |
| Fnu4HI | GCNGC | 1 cut(s) | 102 |
| FokI | GGATG | 1 cut(s) | 275 |
| FriOI | GRGCYC | 4 cut(s) | 170, 243, 282, 397 |
| Fsp4HI | GCNGC | 1 cut(s) | 102 |
| FspBI | CTAG | 3 cut(s) | 23, 177, 320 |
| GluI | GCNGC | 1 cut(s) | 102 |
| GsaI | CCCAGC | 1 cut(s) | 240 |
| GsuI | CTGGAG | 2 cut(s) | 222, 411 |
| HaeIII | GGCC | 3 cut(s) | 78, 144, 168 |
| Hin1II | CATG | 2 cut(s) | 91, 138 |
| HindIII | AAGCTT | 1 cut(s) | 33 |
| HinfI | GANTC | 3 cut(s) | 81, 357, 413 |
| HphI | GGTGA | 4 cut(s) | 76, 83, 227, 415 |
| Hpy188I | TCNGA | 1 cut(s) | 368 |
| Hpy188III | TCNNGA | 1 cut(s) | 254 |
| Hpy99I | CGWCG | 1 cut(s) | 71 |
| HpyAV | CCTTC | 1 cut(s) | 27 |
| HpyCH4III | ACNGT | 3 cut(s) | 152, 224, 275 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 32 |
| HpyF3I | CTNAG | 2 cut(s) | 244, 311 |
| Hsp92II | CATG | 2 cut(s) | 91, 138 |
| Ksp22I | TGATCA | 1 cut(s) | 420 |
| Kzo9I | GATC | 2 cut(s) | 250, 420 |
| LmnI | GCTCC | 2 cut(s) | 190, 392 |
| LpnPI | CCDG | 8 cut(s) | 111, 129, 159, 186, 198, 222, 348, 375 |
| Lsp1109I | GCAGC | 1 cut(s) | 113 |
| MaeI | CTAG | 3 cut(s) | 23, 177, 320 |
| MaeIII | GTNAC | 2 cut(s) | 82, 215 |
| MalI | GATC | 2 cut(s) | 252, 422 |
| MboI | GATC | 2 cut(s) | 250, 420 |
| MboII | GAAGA | 2 cut(s) | 42, 322 |
| MfeI | CAATTG | 1 cut(s) | 406 |
| MflI | RGATCY | 1 cut(s) | 250 |
| MhlI | GDGCHC | 5 cut(s) | 170, 243, 282, 319, 397 |
| MluCI | AATT | 2 cut(s) | 206, 406 |
| MlyI | GAGTC | 2 cut(s) | 90, 366 |
| MnlI | CCTC | 5 cut(s) | 22, 67, 74, 175, 206 |
| MunI | CAATTG | 1 cut(s) | 406 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 32 |
| NdeII | GATC | 2 cut(s) | 250, 420 |
| NlaIII | CATG | 2 cut(s) | 91, 138 |
| NlaIV | GGNNCC | 2 cut(s) | 168, 186 |
| NmeAIII | GCCGAG | 1 cut(s) | 104 |
| NmuCI | GTSAC | 2 cut(s) | 82, 215 |
| PfeI | GAWTC | 1 cut(s) | 413 |
| PflFI | GACNNNGTC | 1 cut(s) | 152 |
| PkrI | GCNGC | 1 cut(s) | 103 |
| PleI | GAGTC | 2 cut(s) | 89, 365 |
| PpsI | GAGTC | 2 cut(s) | 89, 365 |
| Psp124BI | GAGCTC | 2 cut(s) | 282, 397 |
| PspFI | CCCAGC | 1 cut(s) | 236 |
| PspN4I | GGNNCC | 2 cut(s) | 168, 186 |
| PspOMI | GGGCCC | 1 cut(s) | 166 |
| PspPI | GGNCC | 4 cut(s) | 76, 143, 166, 167 |
| PsuI | RGATCY | 1 cut(s) | 250 |
| PsyI | GACNNNGTC | 1 cut(s) | 152 |
| RsaI | GTAC | 1 cut(s) | 140 |
| RsaNI | GTAC | 1 cut(s) | 139 |
| SacI | GAGCTC | 2 cut(s) | 282, 397 |
| SatI | GCNGC | 1 cut(s) | 102 |
| Sau3AI | GATC | 2 cut(s) | 250, 420 |
| Sau96I | GGNCC | 4 cut(s) | 76, 143, 166, 167 |
| SchI | GAGTC | 2 cut(s) | 90, 366 |
| SduI | GDGCHC | 5 cut(s) | 170, 243, 282, 319, 397 |
| SmlI | CTYRAG | 1 cut(s) | 281 |
| SmoI | CTYRAG | 1 cut(s) | 281 |
| Sse9I | AATT | 2 cut(s) | 206, 406 |
| SsiI | CCGC | 1 cut(s) | 99 |
| SspI | AATATT | 1 cut(s) | 402 |
| SspMI | CTAG | 3 cut(s) | 23, 177, 320 |
| SstI | GAGCTC | 2 cut(s) | 282, 397 |
| TaaI | ACNGT | 3 cut(s) | 152, 224, 275 |
| TasI | AATT | 2 cut(s) | 206, 406 |
| TfiI | GAWTC | 1 cut(s) | 413 |
| TscAI | CASTG | 2 cut(s) | 205, 319 |
| TseFI | GTSAC | 2 cut(s) | 82, 215 |
| TseI | GCWGC | 1 cut(s) | 101 |
| Tsp45I | GTSAC | 2 cut(s) | 82, 215 |
| TspDTI | ATGAA | 1 cut(s) | 123 |
| TspRI | CASTG | 2 cut(s) | 205, 319 |
| Tth111I | GACNNNGTC | 1 cut(s) | 152 |
| XapI | RAATTY | 1 cut(s) | 206 |
| XspI | CTAG | 3 cut(s) | 23, 177, 320 |