The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Chloroa_b-bind | PF00504 | 21 - 180 | 9.2e-48 | Chlorophyll A-B binding protein |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 25, 517 |
| AclWI | GGATC | 3 cut(s) | 157, 443, 464 |
| AcsI | RAATTY | 1 cut(s) | 80 |
| AcuI | CTGAAG | 2 cut(s) | 495, 512 |
| AdeI | CACNNNGTG | 1 cut(s) | 410 |
| AgsI | TTSAA | 2 cut(s) | 259, 380 |
| AjnI | CCWGG | 3 cut(s) | 85, 354, 433 |
| AluBI | AGCT | 2 cut(s) | 154, 214 |
| AluI | AGCT | 2 cut(s) | 154, 214 |
| Alw21I | GWGCWC | 3 cut(s) | 193, 216, 366 |
| Alw26I | GTCTC | 2 cut(s) | 125, 273 |
| Alw44I | GTGCAC | 1 cut(s) | 189 |
| AlwI | GGATC | 3 cut(s) | 157, 443, 464 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 128 |
| AoxI | GGCC | 2 cut(s) | 177, 289 |
| ApaLI | GTGCAC | 1 cut(s) | 189 |
| ApoI | RAATTY | 1 cut(s) | 80 |
| AspS9I | GGNCC | 3 cut(s) | 41, 177, 401 |
| AsuHPI | GGTGA | 5 cut(s) | 89, 101, 172, 422, 508 |
| AvaII | GGWCC | 2 cut(s) | 41, 401 |
| BaeGI | GKGCMC | 1 cut(s) | 193 |
| BanII | GRGCYC | 1 cut(s) | 216 |
| BbsI | GAAGAC | 1 cut(s) | 196 |
| Bbv12I | GWGCWC | 3 cut(s) | 193, 216, 366 |
| BccI | CCATC | 3 cut(s) | 70, 93, 168 |
| BciT130I | CCWGG | 3 cut(s) | 87, 356, 435 |
| BciVI | GTATCC | 1 cut(s) | 377 |
| BcoDI | GTCTC | 2 cut(s) | 125, 273 |
| BfaI | CTAG | 2 cut(s) | 194, 338 |
| BfuI | GTATCC | 1 cut(s) | 377 |
| BisI | GCNGC | 1 cut(s) | 518 |
| BlsI | GCNGC | 1 cut(s) | 519 |
| Bme1390I | CCNGG | 3 cut(s) | 87, 356, 435 |
| Bme18I | GGWCC | 2 cut(s) | 41, 401 |
| BmgT120I | GGNCC | 3 cut(s) | 41, 177, 401 |
| BmiI | GGNNCC | 2 cut(s) | 42, 442 |
| BmrFI | CCNGG | 3 cut(s) | 87, 356, 435 |
| BmsI | GCATC | 1 cut(s) | 342 |
| BpiI | GAAGAC | 1 cut(s) | 196 |
| BpmI | CTGGAG | 1 cut(s) | 456 |
| BpuEI | CTTGAG | 1 cut(s) | 176 |
| BsaI | GGTCTC | 2 cut(s) | 125, 273 |
| BsaJI | CCNNGG | 2 cut(s) | 85, 433 |
| Bse1I | ACTGG | 1 cut(s) | 79 |
| Bse3DI | GCAATG | 1 cut(s) | 531 |
| BseBI | CCWGG | 3 cut(s) | 87, 356, 435 |
| BseDI | CCNNGG | 2 cut(s) | 85, 433 |
| BseGI | GGATG | 3 cut(s) | 104, 203, 333 |
| BseMI | GCAATG | 1 cut(s) | 531 |
| BseMII | CTCAG | 2 cut(s) | 120, 294 |
| BseNI | ACTGG | 1 cut(s) | 79 |
| BseRI | GAGGAG | 1 cut(s) | 453 |
| BseSI | GKGCMC | 1 cut(s) | 193 |
| BsgI | GTGCAG | 1 cut(s) | 39 |
| BshFI | GGCC | 2 cut(s) | 179, 291 |
| BsiHKAI | GWGCWC | 3 cut(s) | 193, 216, 366 |
| BslFI | GGGAC | 2 cut(s) | 54, 116 |
| BsmAI | GTCTC | 2 cut(s) | 125, 273 |
| BsmFI | GGGAC | 2 cut(s) | 54, 116 |
| BsnI | GGCC | 2 cut(s) | 179, 291 |
| Bso31I | GGTCTC | 2 cut(s) | 125, 273 |
| Bsp1286I | GDGCHC | 3 cut(s) | 193, 216, 366 |
| Bsp143I | GATC | 3 cut(s) | 162, 448, 469 |
| BspACI | CCGC | 2 cut(s) | 25, 517 |
| BspANI | GGCC | 2 cut(s) | 179, 291 |
| BspCNI | CTCAG | 2 cut(s) | 121, 293 |
| BspLI | GGNNCC | 2 cut(s) | 42, 442 |
| BspPI | GGATC | 3 cut(s) | 157, 443, 464 |
| BspTNI | GGTCTC | 2 cut(s) | 125, 273 |
| BsrDI | GCAATG | 1 cut(s) | 531 |
| BsrI | ACTGG | 1 cut(s) | 79 |
| BssECI | CCNNGG | 2 cut(s) | 85, 433 |
| BssMI | GATC | 3 cut(s) | 162, 448, 469 |
| Bst2UI | CCWGG | 3 cut(s) | 87, 356, 435 |
| Bst4CI | ACNGT | 1 cut(s) | 149 |
| BstC8I | GCNNGC | 1 cut(s) | 522 |
| BstDEI | CTNAG | 2 cut(s) | 129, 280 |
| BstF5I | GGATG | 3 cut(s) | 104, 203, 333 |
| BstKTI | GATC | 3 cut(s) | 165, 451, 472 |
| BstMAI | GTCTC | 2 cut(s) | 125, 273 |
| BstMBI | GATC | 3 cut(s) | 162, 448, 469 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 347 |
| BstNI | CCWGG | 3 cut(s) | 87, 356, 435 |
| BstSCI | CCNGG | 3 cut(s) | 85, 354, 433 |
| BstSLI | GKGCMC | 1 cut(s) | 193 |
| BstV2I | GAAGAC | 1 cut(s) | 196 |
| BsuI | GTATCC | 1 cut(s) | 377 |
| BsuRI | GGCC | 2 cut(s) | 179, 291 |
| BtsCI | GGATG | 3 cut(s) | 104, 203, 333 |
| BtsI | GCAGTG | 1 cut(s) | 105 |
| BtsIMutI | CAGTG | 1 cut(s) | 105 |
| Cac8I | GCNNGC | 1 cut(s) | 522 |
| CaiI | CAGNNNCTG | 1 cut(s) | 128 |
| Cfr13I | GGNCC | 3 cut(s) | 41, 177, 401 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 441, 476 |
| CviAII | CATG | 3 cut(s) | 181, 323, 367 |
| DdeI | CTNAG | 2 cut(s) | 129, 280 |
| DpnI | GATC | 3 cut(s) | 164, 450, 471 |
| DpnII | GATC | 3 cut(s) | 162, 448, 469 |
| DraIII | CACNNNGTG | 1 cut(s) | 410 |
| Ecl136II | GAGCTC | 1 cut(s) | 214 |
| Eco24I | GRGCYC | 1 cut(s) | 216 |
| Eco31I | GGTCTC | 2 cut(s) | 125, 273 |
| Eco47I | GGWCC | 2 cut(s) | 41, 401 |
| Eco53kI | GAGCTC | 1 cut(s) | 214 |
| Eco57I | CTGAAG | 2 cut(s) | 495, 512 |
| EcoICRI | GAGCTC | 1 cut(s) | 214 |
| EcoRI | GAATTC | 1 cut(s) | 80 |
| EcoRII | CCWGG | 3 cut(s) | 85, 354, 433 |
| EcoT38I | GRGCYC | 1 cut(s) | 216 |
| FaeI | CATG | 3 cut(s) | 184, 326, 370 |
| FaiI | YATR | 6 cut(s) | 15, 67, 96, 182, 324, 368 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 276, 308 |
| FaqI | GGGAC | 2 cut(s) | 54, 116 |
| FatI | CATG | 3 cut(s) | 180, 322, 366 |
| Fnu4HI | GCNGC | 1 cut(s) | 518 |
| FokI | GGATG | 3 cut(s) | 111, 210, 320 |
| FriOI | GRGCYC | 1 cut(s) | 216 |
| Fsp4HI | GCNGC | 1 cut(s) | 518 |
| FspBI | CTAG | 2 cut(s) | 194, 338 |
| GluI | GCNGC | 1 cut(s) | 518 |
| GsuI | CTGGAG | 1 cut(s) | 456 |
| HaeIII | GGCC | 2 cut(s) | 179, 291 |
| Hin1II | CATG | 3 cut(s) | 184, 326, 370 |
| HinfI | GANTC | 1 cut(s) | 422 |
| HphI | GGTGA | 5 cut(s) | 89, 101, 172, 422, 508 |
| Hpy166II | GTNNAC | 1 cut(s) | 191 |
| Hpy188I | TCNGA | 2 cut(s) | 52, 283 |
| Hpy188III | TCNNGA | 3 cut(s) | 419, 473, 508 |
| Hpy8I | GTNNAC | 1 cut(s) | 191 |
| HpyAV | CCTTC | 5 cut(s) | 278, 374, 407, 487, 493 |
| HpyCH4III | ACNGT | 1 cut(s) | 149 |
| HpyCH4V | TGCA | 3 cut(s) | 20, 191, 326 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 347 |
| HpyF3I | CTNAG | 2 cut(s) | 129, 280 |
| Hsp92II | CATG | 3 cut(s) | 184, 326, 370 |
| Kzo9I | GATC | 3 cut(s) | 162, 448, 469 |
| LmnI | GCTCC | 1 cut(s) | 440 |
| LweI | GCATC | 1 cut(s) | 342 |
| MaeI | CTAG | 2 cut(s) | 194, 338 |
| MaeIII | GTNAC | 1 cut(s) | 89 |
| MalI | GATC | 3 cut(s) | 164, 450, 471 |
| MboI | GATC | 3 cut(s) | 162, 448, 469 |
| MboII | GAAGA | 2 cut(s) | 196, 268 |
| MhlI | GDGCHC | 3 cut(s) | 193, 216, 366 |
| MluCI | AATT | 1 cut(s) | 80 |
| MnlI | CCTC | 6 cut(s) | 151, 238, 326, 392, 431, 541 |
| MslI | CAYNNNNRTG | 1 cut(s) | 196 |
| MspR9I | CCNGG | 3 cut(s) | 87, 356, 435 |
| MvaI | CCWGG | 3 cut(s) | 87, 356, 435 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 347 |
| NdeII | GATC | 3 cut(s) | 162, 448, 469 |
| NlaIII | CATG | 3 cut(s) | 184, 326, 370 |
| NlaIV | GGNNCC | 2 cut(s) | 42, 442 |
| NmuCI | GTSAC | 1 cut(s) | 89 |
| PfeI | GAWTC | 1 cut(s) | 422 |
| PkrI | GCNGC | 1 cut(s) | 519 |
| Psp124BI | GAGCTC | 1 cut(s) | 216 |
| Psp6I | CCWGG | 3 cut(s) | 85, 354, 433 |
| PspGI | CCWGG | 3 cut(s) | 85, 354, 433 |
| PspN4I | GGNNCC | 2 cut(s) | 42, 442 |
| PspPI | GGNCC | 3 cut(s) | 41, 177, 401 |
| PstNI | CAGNNNCTG | 1 cut(s) | 128 |
| RseI | CAYNNNNRTG | 1 cut(s) | 196 |
| SacI | GAGCTC | 1 cut(s) | 216 |
| SatI | GCNGC | 1 cut(s) | 518 |
| Sau3AI | GATC | 3 cut(s) | 162, 448, 469 |
| Sau96I | GGNCC | 3 cut(s) | 41, 177, 401 |
| ScrFI | CCNGG | 3 cut(s) | 87, 356, 435 |
| SduI | GDGCHC | 3 cut(s) | 193, 216, 366 |
| SfaNI | GCATC | 1 cut(s) | 342 |
| SinI | GGWCC | 2 cut(s) | 41, 401 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 196 |
| SmlI | CTYRAG | 1 cut(s) | 155 |
| SmoI | CTYRAG | 1 cut(s) | 155 |
| Sse9I | AATT | 1 cut(s) | 80 |
| SsiI | CCGC | 2 cut(s) | 25, 517 |
| SspMI | CTAG | 2 cut(s) | 194, 338 |
| SstI | GAGCTC | 1 cut(s) | 216 |
| StyD4I | CCNGG | 3 cut(s) | 85, 354, 433 |
| TaaI | ACNGT | 1 cut(s) | 149 |
| TasI | AATT | 1 cut(s) | 80 |
| TauI | GCSGC | 1 cut(s) | 520 |
| TfiI | GAWTC | 1 cut(s) | 422 |
| TscAI | CASTG | 1 cut(s) | 112 |
| TseFI | GTSAC | 1 cut(s) | 89 |
| Tsp45I | GTSAC | 1 cut(s) | 89 |
| TspRI | CASTG | 1 cut(s) | 112 |
| VneI | GTGCAC | 1 cut(s) | 189 |
| VpaK11BI | GGWCC | 2 cut(s) | 41, 401 |
| XapI | RAATTY | 1 cut(s) | 80 |
| XspI | CTAG | 2 cut(s) | 194, 338 |