The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Chloroa_b-bind | PF00504 | 67 - 234 | 1.5e-50 | Chlorophyll A-B binding protein |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 107 |
| AccI | GTMKAC | 1 cut(s) | 561 |
| AciI | CCGC | 2 cut(s) | 114, 536 |
| AclWI | GGATC | 2 cut(s) | 260, 605 |
| AcoI | YGGCCR | 2 cut(s) | 43, 663 |
| AfaI | GTAC | 4 cut(s) | 155, 176, 572, 693 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 88, 155, 191, 327 |
| AflII | CTTAAG | 1 cut(s) | 632 |
| AgsI | TTSAA | 4 cut(s) | 12, 312, 400, 521 |
| AjnI | CCWGG | 1 cut(s) | 226 |
| Alw21I | GWGCWC | 2 cut(s) | 297, 648 |
| Alw26I | GTCTC | 1 cut(s) | 266 |
| AlwI | GGATC | 2 cut(s) | 260, 605 |
| Ama87I | CYCGRG | 3 cut(s) | 269, 296, 326 |
| AoxI | GGCC | 6 cut(s) | 43, 157, 182, 318, 542, 663 |
| ApeKI | GCWGC | 5 cut(s) | 5, 55, 68, 116, 144 |
| AspLEI | GCGC | 1 cut(s) | 108 |
| AspS9I | GGNCC | 5 cut(s) | 158, 182, 318, 542, 716 |
| AsuC2I | CCSGG | 2 cut(s) | 576, 795 |
| AsuHPI | GGTGA | 6 cut(s) | 91, 98, 206, 242, 563, 649 |
| AvaI | CYCGRG | 3 cut(s) | 269, 296, 326 |
| AvaII | GGWCC | 1 cut(s) | 716 |
| BalI | TGGCCA | 2 cut(s) | 45, 665 |
| BanII | GRGCYC | 5 cut(s) | 258, 297, 334, 412, 648 |
| BbsI | GAAGAC | 2 cut(s) | 337, 664 |
| Bbv12I | GWGCWC | 2 cut(s) | 297, 648 |
| BbvI | GCAGC | 4 cut(s) | 55, 67, 128, 156 |
| BccI | CCATC | 3 cut(s) | 211, 309, 502 |
| BceAI | ACGGC | 2 cut(s) | 172, 253 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 260, 294 |
| BciT130I | CCWGG | 1 cut(s) | 228 |
| BcnI | CCSGG | 2 cut(s) | 576, 795 |
| BcoDI | GTCTC | 1 cut(s) | 266 |
| BfaI | CTAG | 4 cut(s) | 335, 359, 434, 731 |
| BfmI | CTRYAG | 1 cut(s) | 526 |
| BfrI | CTTAAG | 1 cut(s) | 632 |
| BisI | GCNGC | 5 cut(s) | 6, 56, 69, 117, 145 |
| BlpI | GCTNAGC | 1 cut(s) | 627 |
| BlsI | GCNGC | 5 cut(s) | 7, 57, 70, 118, 146 |
| BmcAI | AGTACT | 1 cut(s) | 176 |
| Bme1390I | CCNGG | 3 cut(s) | 228, 576, 795 |
| Bme18I | GGWCC | 1 cut(s) | 716 |
| BmeT110I | CYCGRG | 3 cut(s) | 269, 296, 326 |
| BmgT120I | GGNCC | 5 cut(s) | 158, 182, 318, 542, 716 |
| BmiI | GGNNCC | 4 cut(s) | 183, 201, 409, 717 |
| BmrFI | CCNGG | 3 cut(s) | 228, 576, 795 |
| BmsI | GCATC | 1 cut(s) | 80 |
| BpiI | GAAGAC | 2 cut(s) | 337, 664 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 531, 563 |
| BpmI | CTGGAG | 2 cut(s) | 237, 426 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 627 |
| BpuEI | CTTGAG | 1 cut(s) | 632 |
| BpuMI | CCSGG | 2 cut(s) | 576, 795 |
| BsaI | GGTCTC | 1 cut(s) | 266 |
| BsaJI | CCNNGG | 3 cut(s) | 82, 149, 574 |
| BsaWI | WCCGGW | 2 cut(s) | 191, 707 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 375, 405 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 88, 155, 191, 327 |
| Bse1I | ACTGG | 2 cut(s) | 220, 666 |
| BseBI | CCWGG | 1 cut(s) | 228 |
| BseDI | CCNNGG | 3 cut(s) | 82, 149, 574 |
| BseGI | GGATG | 2 cut(s) | 303, 344 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 88, 155, 191, 327 |
| BseMII | CTCAG | 3 cut(s) | 73, 273, 618 |
| BseNI | ACTGG | 2 cut(s) | 220, 666 |
| BseRI | GAGGAG | 1 cut(s) | 71 |
| BseXI | GCAGC | 4 cut(s) | 55, 67, 128, 156 |
| BseYI | CCCAGC | 2 cut(s) | 240, 251 |
| BsgI | GTGCAG | 2 cut(s) | 74, 534 |
| BshFI | GGCC | 6 cut(s) | 45, 159, 184, 320, 544, 665 |
| BsiHKAI | GWGCWC | 2 cut(s) | 297, 648 |
| BsiHKCI | CYCGRG | 3 cut(s) | 269, 296, 326 |
| BsiSI | CCGG | 4 cut(s) | 192, 576, 708, 795 |
| BslFI | GGGAC | 3 cut(s) | 257, 444, 729 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 88, 155, 191, 327 |
| BsmAI | GTCTC | 1 cut(s) | 266 |
| BsmFI | GGGAC | 3 cut(s) | 257, 444, 729 |
| BsnI | GGCC | 6 cut(s) | 45, 159, 184, 320, 544, 665 |
| Bso31I | GGTCTC | 1 cut(s) | 266 |
| BsoBI | CYCGRG | 3 cut(s) | 269, 296, 326 |
| Bsp1286I | GDGCHC | 5 cut(s) | 258, 297, 334, 412, 648 |
| Bsp143I | GATC | 3 cut(s) | 265, 501, 610 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 627 |
| BspACI | CCGC | 2 cut(s) | 114, 536 |
| BspANI | GGCC | 6 cut(s) | 45, 159, 184, 320, 544, 665 |
| BspCNI | CTCAG | 3 cut(s) | 72, 272, 619 |
| BspLI | GGNNCC | 4 cut(s) | 183, 201, 409, 717 |
| BspPI | GGATC | 2 cut(s) | 260, 605 |
| BspTI | CTTAAG | 1 cut(s) | 632 |
| BspTNI | GGTCTC | 1 cut(s) | 266 |
| BsrI | ACTGG | 2 cut(s) | 220, 666 |
| BssECI | CCNNGG | 3 cut(s) | 82, 149, 574 |
| BssMI | GATC | 3 cut(s) | 265, 501, 610 |
| BssT1I | CCWWGG | 1 cut(s) | 149 |
| Bst2UI | CCWGG | 1 cut(s) | 228 |
| Bst4CI | ACNGT | 2 cut(s) | 167, 290 |
| BstAFI | CTTAAG | 1 cut(s) | 632 |
| BstC8I | GCNNGC | 2 cut(s) | 43, 603 |
| BstDEI | CTNAG | 4 cut(s) | 59, 259, 457, 627 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 86 |
| BstF5I | GGATG | 2 cut(s) | 303, 344 |
| BstHHI | GCGC | 1 cut(s) | 108 |
| BstKTI | GATC | 3 cut(s) | 268, 504, 613 |
| BstMAI | GTCTC | 1 cut(s) | 266 |
| BstMBI | GATC | 3 cut(s) | 265, 501, 610 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 47, 488 |
| BstNI | CCWGG | 1 cut(s) | 228 |
| BstSCI | CCNGG | 3 cut(s) | 226, 574, 793 |
| BstSFI | CTRYAG | 1 cut(s) | 526 |
| BstV1I | GCAGC | 4 cut(s) | 55, 67, 128, 156 |
| BstV2I | GAAGAC | 2 cut(s) | 337, 664 |
| BsuRI | GGCC | 6 cut(s) | 45, 159, 184, 320, 544, 665 |
| BtsCI | GGATG | 2 cut(s) | 303, 344 |
| BtsIMutI | CAGTG | 2 cut(s) | 213, 427 |
| Cac8I | GCNNGC | 2 cut(s) | 43, 603 |
| CfoI | GCGC | 1 cut(s) | 108 |
| Cfr13I | GGNCC | 5 cut(s) | 158, 182, 318, 542, 716 |
| Csp6I | GTAC | 4 cut(s) | 154, 175, 571, 692 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 769, 804 |
| CviAII | CATG | 4 cut(s) | 103, 322, 667, 676 |
| CviQI | GTAC | 4 cut(s) | 154, 175, 571, 692 |
| DdeI | CTNAG | 4 cut(s) | 59, 259, 457, 627 |
| DpnI | GATC | 3 cut(s) | 267, 503, 612 |
| DpnII | GATC | 3 cut(s) | 265, 501, 610 |
| EaeI | YGGCCR | 2 cut(s) | 43, 663 |
| Ecl136II | GAGCTC | 2 cut(s) | 295, 646 |
| Eco130I | CCWWGG | 1 cut(s) | 149 |
| Eco24I | GRGCYC | 5 cut(s) | 258, 297, 334, 412, 648 |
| Eco31I | GGTCTC | 1 cut(s) | 266 |
| Eco47I | GGWCC | 1 cut(s) | 716 |
| Eco53kI | GAGCTC | 2 cut(s) | 295, 646 |
| Eco88I | CYCGRG | 3 cut(s) | 269, 296, 326 |
| EcoICRI | GAGCTC | 2 cut(s) | 295, 646 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 86 |
| EcoO109I | RGGNCCY | 1 cut(s) | 542 |
| EcoRII | CCWGG | 1 cut(s) | 226 |
| EcoT14I | CCWWGG | 1 cut(s) | 149 |
| EcoT38I | GRGCYC | 5 cut(s) | 258, 297, 334, 412, 648 |
| ErhI | CCWWGG | 1 cut(s) | 149 |
| FaeI | CATG | 4 cut(s) | 106, 325, 670, 679 |
| FaiI | YATR | 6 cut(s) | 104, 323, 668, 677, 775, 777 |
| FaqI | GGGAC | 3 cut(s) | 257, 444, 729 |
| FatI | CATG | 4 cut(s) | 102, 321, 666, 675 |
| FauI | CCCGC | 1 cut(s) | 529 |
| FauNDI | CATATG | 1 cut(s) | 775 |
| FblI | GTMKAC | 1 cut(s) | 561 |
| Fnu4HI | GCNGC | 5 cut(s) | 6, 56, 69, 117, 145 |
| FokI | GGATG | 2 cut(s) | 290, 351 |
| FriOI | GRGCYC | 5 cut(s) | 258, 297, 334, 412, 648 |
| Fsp4HI | GCNGC | 5 cut(s) | 6, 56, 69, 117, 145 |
| FspBI | CTAG | 4 cut(s) | 335, 359, 434, 731 |
| FspI | TGCGCA | 1 cut(s) | 107 |
| GlaI | GCGC | 1 cut(s) | 107 |
| GluI | GCNGC | 5 cut(s) | 6, 56, 69, 117, 145 |
| GsaI | CCCAGC | 2 cut(s) | 244, 255 |
| GsuI | CTGGAG | 2 cut(s) | 237, 426 |
| HaeIII | GGCC | 6 cut(s) | 45, 159, 184, 320, 544, 665 |
| HapII | CCGG | 4 cut(s) | 192, 576, 708, 795 |
| HhaI | GCGC | 1 cut(s) | 108 |
| Hin1II | CATG | 4 cut(s) | 106, 325, 670, 679 |
| Hin6I | GCGC | 1 cut(s) | 106 |
| HinP1I | GCGC | 1 cut(s) | 106 |
| HincII | GTYRAC | 1 cut(s) | 757 |
| HindII | GTYRAC | 1 cut(s) | 757 |
| HindIII | AAGCTT | 1 cut(s) | 454 |
| HinfI | GANTC | 3 cut(s) | 96, 372, 684 |
| HpaI | GTTAAC | 1 cut(s) | 757 |
| HpaII | CCGG | 4 cut(s) | 192, 576, 708, 795 |
| HphI | GGTGA | 6 cut(s) | 91, 98, 206, 242, 563, 649 |
| Hpy166II | GTNNAC | 3 cut(s) | 463, 562, 757 |
| Hpy188I | TCNGA | 2 cut(s) | 383, 683 |
| Hpy188III | TCNNGA | 5 cut(s) | 269, 312, 505, 614, 649 |
| Hpy8I | GTNNAC | 3 cut(s) | 463, 562, 757 |
| HpyAV | CCTTC | 3 cut(s) | 42, 515, 634 |
| HpyCH4III | ACNGT | 2 cut(s) | 167, 290 |
| HpyCH4V | TGCA | 4 cut(s) | 55, 71, 515, 605 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 47, 488 |
| HpyF3I | CTNAG | 4 cut(s) | 59, 259, 457, 627 |
| Hsp92II | CATG | 4 cut(s) | 106, 325, 670, 679 |
| HspAI | GCGC | 1 cut(s) | 106 |
| KspAI | GTTAAC | 1 cut(s) | 757 |
| Kzo9I | GATC | 3 cut(s) | 265, 501, 610 |
| LmnI | GCTCC | 4 cut(s) | 205, 407, 582, 643 |
| Lsp1109I | GCAGC | 4 cut(s) | 55, 67, 128, 156 |
| LweI | GCATC | 1 cut(s) | 80 |
| MaeI | CTAG | 4 cut(s) | 335, 359, 434, 731 |
| MaeIII | GTNAC | 2 cut(s) | 230, 703 |
| MalI | GATC | 3 cut(s) | 267, 503, 612 |
| MboI | GATC | 3 cut(s) | 265, 501, 610 |
| MboII | GAAGA | 3 cut(s) | 337, 669, 679 |
| MhlI | GDGCHC | 5 cut(s) | 258, 297, 334, 412, 648 |
| MlsI | TGGCCA | 2 cut(s) | 45, 665 |
| MluCI | AATT | 1 cut(s) | 531 |
| MluNI | TGGCCA | 2 cut(s) | 45, 665 |
| MlyI | GAGTC | 1 cut(s) | 381 |
| Mox20I | TGGCCA | 2 cut(s) | 45, 665 |
| MscI | TGGCCA | 2 cut(s) | 45, 665 |
| MseI | TTAA | 2 cut(s) | 633, 756 |
| Msp20I | TGGCCA | 2 cut(s) | 45, 665 |
| MspA1I | CMGCKG | 3 cut(s) | 68, 251, 263 |
| MspCI | CTTAAG | 1 cut(s) | 632 |
| MspI | CCGG | 4 cut(s) | 192, 576, 708, 795 |
| MspR9I | CCNGG | 3 cut(s) | 228, 576, 795 |
| MvaI | CCWGG | 1 cut(s) | 228 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 47, 488 |
| NciI | CCSGG | 2 cut(s) | 576, 795 |
| NdeI | CATATG | 1 cut(s) | 775 |
| NdeII | GATC | 3 cut(s) | 265, 501, 610 |
| NlaIII | CATG | 4 cut(s) | 106, 325, 670, 679 |
| NlaIV | GGNNCC | 4 cut(s) | 183, 201, 409, 717 |
| NmuCI | GTSAC | 1 cut(s) | 230 |
| NsbI | TGCGCA | 1 cut(s) | 107 |
| PaeR7I | CTCGAG | 1 cut(s) | 296 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 687 |
| PfeI | GAWTC | 2 cut(s) | 96, 684 |
| PflFI | GACNNNGTC | 1 cut(s) | 167 |
| PfoI | TCCNGGA | 1 cut(s) | 793 |
| PkrI | GCNGC | 5 cut(s) | 7, 57, 70, 118, 146 |
| PleI | GAGTC | 1 cut(s) | 380 |
| PpsI | GAGTC | 1 cut(s) | 380 |
| Psp124BI | GAGCTC | 2 cut(s) | 297, 648 |
| Psp6I | CCWGG | 1 cut(s) | 226 |
| PspFI | CCCAGC | 2 cut(s) | 240, 251 |
| PspGI | CCWGG | 1 cut(s) | 226 |
| PspN4I | GGNNCC | 4 cut(s) | 183, 201, 409, 717 |
| PspPI | GGNCC | 5 cut(s) | 158, 182, 318, 542, 716 |
| PspXI | VCTCGAGB | 1 cut(s) | 296 |
| PsyI | GACNNNGTC | 1 cut(s) | 167 |
| PvuII | CAGCTG | 3 cut(s) | 68, 251, 263 |
| RsaI | GTAC | 4 cut(s) | 155, 176, 572, 693 |
| RsaNI | GTAC | 4 cut(s) | 154, 175, 571, 692 |
| SacI | GAGCTC | 2 cut(s) | 297, 648 |
| SaqAI | TTAA | 2 cut(s) | 633, 756 |
| SatI | GCNGC | 5 cut(s) | 6, 56, 69, 117, 145 |
| Sau3AI | GATC | 3 cut(s) | 265, 501, 610 |
| Sau96I | GGNCC | 5 cut(s) | 158, 182, 318, 542, 716 |
| ScaI | AGTACT | 1 cut(s) | 176 |
| SchI | GAGTC | 1 cut(s) | 381 |
| ScrFI | CCNGG | 3 cut(s) | 228, 576, 795 |
| SduI | GDGCHC | 5 cut(s) | 258, 297, 334, 412, 648 |
| SfaNI | GCATC | 1 cut(s) | 80 |
| SfcI | CTRYAG | 1 cut(s) | 526 |
| Sfr274I | CTCGAG | 1 cut(s) | 296 |
| SinI | GGWCC | 1 cut(s) | 716 |
| SlaI | CTCGAG | 1 cut(s) | 296 |
| SmlI | CTYRAG | 3 cut(s) | 296, 632, 647 |
| SmoI | CTYRAG | 3 cut(s) | 296, 632, 647 |
| Sse9I | AATT | 1 cut(s) | 531 |
| SsiI | CCGC | 2 cut(s) | 114, 536 |
| SspMI | CTAG | 4 cut(s) | 335, 359, 434, 731 |
| SstI | GAGCTC | 2 cut(s) | 297, 648 |
| StyD4I | CCNGG | 3 cut(s) | 226, 574, 793 |
| StyI | CCWWGG | 1 cut(s) | 149 |
| TaaI | ACNGT | 2 cut(s) | 167, 290 |
| TaqI | TCGA | 1 cut(s) | 297 |
| TaqII | GACCGA | 1 cut(s) | 733 |
| TasI | AATT | 1 cut(s) | 531 |
| TatI | WGTACW | 1 cut(s) | 174 |
| TfiI | GAWTC | 2 cut(s) | 96, 684 |
| Tru1I | TTAA | 2 cut(s) | 633, 756 |
| Tru9I | TTAA | 2 cut(s) | 633, 756 |
| TscAI | CASTG | 2 cut(s) | 220, 427 |
| TseFI | GTSAC | 1 cut(s) | 230 |
| TseI | GCWGC | 5 cut(s) | 5, 55, 68, 116, 144 |
| Tsp45I | GTSAC | 1 cut(s) | 230 |
| TspGWI | ACGGA | 1 cut(s) | 669 |
| TspRI | CASTG | 2 cut(s) | 220, 427 |
| Tth111I | GACNNNGTC | 1 cut(s) | 167 |
| Vha464I | CTTAAG | 1 cut(s) | 632 |
| VpaK11BI | GGWCC | 1 cut(s) | 716 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 86 |
| XhoI | CTCGAG | 1 cut(s) | 296 |
| XmiI | GTMKAC | 1 cut(s) | 561 |
| XspI | CTAG | 4 cut(s) | 335, 359, 434, 731 |
| ZrmI | AGTACT | 1 cut(s) | 176 |