FvH4_2g11450

HVA22-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000440
Physical Location & Seq
Reverse (-)
9980417 .. 9986031
5615 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g11450.t8

Sequence Viewer

Length: 1725 bp
ATGGGTTTACTGGGTCTTCTTGGATTTGCGCTCCAATGCTTTGATGTTCTTGCATGGCCTCTTTTTGCTCTGCTCTATCCTCTGTATTCTTCCATAAGAGCAATCGAGACAAATTCCATTTCAGATACTCACAAGTTAAATACATATTGGATCGTTTTCTCATTGATCTTGCTCTTTGAACATGCTTTTATGAAGCTGCTTGAATGCTTCTCCCTCTGGCCATACATGAGGCTGCTGATTGTCTTCTATTTGGTGATACCACATTTTGACGGTGCCTTGTATGTCTATAAACACCTTATCTGTCCATGTCTCTCCATGGATCCTCAAATTATTTTTAGCTTGTTCAAAATGCGGAAGGAGTCCTTGGTGAGAGAAAACTTTCTATCTGAGGTGGAGAGATATGTAAAGGAAAATGGATATGAAGGTTTGGAAAAGTTTATCTCTAGCAAGTCGACGAAATCAAATATTGATGGAAACTTAAAGGCAGTTTCAACCATGGATAATGACGAGCCAAATGGTGGACAGAATGATATCAAAGCTGTGCAGATACTGGTGAAAAAGAAGGAAACAACTGCTAACCAAGTTAGTGAGGCAGAGCCTATTCTCACTGTGAATAAAGATAGATCTTCTGCTATGCAAATAAAAGAAAAAACCGTTGAGGTTGCAGCAGACAGAAGAATTCTGGAGACTCCGCCTTCAAAGAAAGTCCAAAAGGAGTTGACCGCAGTCAGTGTGCTAGCAACTCAAACTGATGCAAAAAACATTGAGGTTGCAGCAGACAGAGGAATTCTGAAGACTCTGCCTCAAAAGAAAGTCCAAAAGGAATGGACTGCAATCAGTCCGTTACCAACTCAAACTGATGCAAAAACCATTGAGGTTGCAGCAGAAAGAGGAATTCTAAAGACTCCGCCTCCAAAGAAAGTCCAAGGGGAGTTGACCGCAGTCTGTCCACTGCCAATTCAAACTGATGCAACTTTTGATTTCCCTCTCGGTGGTAATATACACAAGGCTACATATGAGGCAGTGAAGATAAACAATGAGGCAAAGCCTAATCTCACTCTTACTGAAAACCATACTGTTCCAACTGTGAAAATTAATGAAAAGCCAGTTGAAGTTGGAATAGGTATGGAACATCCCCAGTCACCTAAACAAGTCCAGAAAGAGTGGACTTGTGCTCTCTGTCAGGTAACCACGACATGTGAAACAAATTTGAATTCCCACCTGCAAGGGAGGAAACACAAGGCTTCATATGATGCACTGAAAGCAAGGAACCAGGCATTTGTGCCAACGATTGCCCCAGCTTCAACTGCAAAGACATCTGATCAACCAAATAAGGAGCCAGAAAAGAGTATTCCAAGCAGAGGACTGAAACAAAAAGTTACTTCGAATGAACATGTGCAAGCCCAGCCAAAATTTAGTCCACTTACGAAGCTCAATAAACCGAAAGAGGCGCTAGTAGATTGCGTATCCAGCAATGGCCTGAAGGGGAAAATTGCTATACATCTGGACAAGGTACAAAGTCAACAACCGAAGCCGAATTCCTCTTTGTGGTGCGCACTTTGTAGCATACGCTGCGCTGGTGAGACTGACATGATGTGTCATCTCAAGGGAAGGAAACACAATGAGAATGAACAACGACAAGAGAACCTAATCAAGGTTGCAGAGATGAATAAGCCCCGGGGCATTTGTGATACCGCGACAGGCGAGTTTGACATTTTCTGGTAA

Protein Analysis

575

Amino Acids

64.15

Weight (kDa)

8.78

Isoelectric Point (pI)

32.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TB2_DP1_HVA22 PF03134 27 - 103 3.6e-19 TB2/DP1, HVA22 family
zf-met PF12874 353 - 377 2.2e-09 Zinc-finger of C2H2 type
zf-met PF12874 480 - 504 4e-06 Zinc-finger of C2H2 type
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000440)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20313 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_5g25851
prunus_persica Prupe.8G072900_v2.0.a1 Prupe.8G072900_v2.0.a1 Prupe.8G072900_v2.0.a1 Prupe.8G073000_v2.0.a1 Prupe.8G073000_v2.0.a1 Prupe.8G073000_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1
pyrus_communis pycom01g01210 pycom02g12000 pycom10g21410 pycom11g11060 pycom13g24280
rosa_chinensis RchiOBHm_Chr3g0461871 RchiOBHm_Chr4g0427221 RchiOBHm_Chr4g0427231 RchiOBHm_Chr6g0270081 RchiOBHm_Chr6g0270121 RchiOBHm_Chr6g0270151 RchiOBHm_Chr6g0270161 RchiOBHm_Chr6g0270171 RchiOBHm_Chr6g0270181 RchiOBHm_Chr6g0270191 RchiOBHm_Chr7g0229301
rosa_laevigata RLG00000013809 RLG00000013810 RLG00000013812 RLG00000013814 RLG00000013817 RLG00000013818
rosa_multiflora Rmu_sc0000918.1_g000004 Rmu_sc0000918.1_g000019 Rmu_sc0000918.1_g000027 Rmu_sc0002817.1_g000013 Rmu_sc0004366.1_g000009 Rmu_sc0004376.1_g000011 Rmu_sc0004376.1_g000014 Rmu_sc0004376.1_g000021 Rmu_sc0006909.1_g000002 Rmu_sc0011356.1_g000003 Rmu_sc0011369.1_g000005 Rmu_sc0017552.1_g000001
rosa_roxburghii Rroxscaffold_5G00354200 Rroxscaffold_7G00198080 Rroxscaffold_7G00198090 Rroxscaffold_7G00198100 Rroxscaffold_7G00198130 Rroxscaffold_7G00198170
rosa_rugosa Rorug06G0052400 Rorug06G0052500 Rorug06G0053000
rosa_samantha Rh6AG171300 Rh6AG171400 Rh6AG171800 Rh6AG171900 Rh6AG172000 Rh6AG172100 Rh6AG369700 Rh6BG175800 Rh6BG175900 Rh6BG176200 Rh6BG176300 Rh6CG170900 Rh6CG171100 Rh6CG171400 Rh6CG171500 Rh6CG171700 Rh6CG171900 Rh6CG172000 Rh6CG172100
rosa_wichuraiana Rw6G014730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1230
Acc16I TGCGCA 1 cut(s) 1555
Acc36I ACCTGC 1 cut(s) 1230
AccB1I GGYRCC 1 cut(s) 272
AccB7I CCANNNNNTGG 1 cut(s) 518
AccI GTMKAC 1 cut(s) 452
AccII CGCG 1 cut(s) 1697
AciI CCGC 6 cut(s) 352, 692, 723, 908, 939, 1695
AclWI GGATC 3 cut(s) 158, 314, 327
AcoI YGGCCR 1 cut(s) 218
AcsI RAATTY 8 cut(s) 112, 678, 786, 894, 1207, 1213, 1412, 1537
AcuI CTGAAG 2 cut(s) 812, 1502
AfaI GTAC 1 cut(s) 1515
AfiI CCNNNNNNNGG 5 cut(s) 518, 992, 1361, 1548, 1654
AflIII ACRYGT 2 cut(s) 1196, 1393
AgsI TTSAA 9 cut(s) 179, 203, 346, 492, 699, 962, 1112, 1213, 1305
AjnI CCWGG 1 cut(s) 1272
AjuI GAANNNNNNNTTGG 2 cut(s) 347, 379
AluBI AGCT 5 cut(s) 196, 339, 539, 1301, 1432
AluI AGCT 5 cut(s) 196, 339, 539, 1301, 1432
Alw21I GWGCWC 1 cut(s) 1177
Alw26I GTCTC 4 cut(s) 101, 314, 680, 1577
AlwI GGATC 3 cut(s) 158, 314, 327
AlwNI CAGNNNCTG 1 cut(s) 550
Ama87I CYCGRG 1 cut(s) 1677
AoxI GGCC 3 cut(s) 56, 218, 1477
ApeKI GCWGC 6 cut(s) 196, 232, 665, 773, 881, 1572
ApoI RAATTY 8 cut(s) 112, 678, 786, 894, 1207, 1213, 1412, 1537
AseI ATTAAT 1 cut(s) 1095
Asp700I GAANNNNTTC 1 cut(s) 378
AspLEI GCGC 4 cut(s) 31, 1453, 1556, 1577
AsuC2I CCSGG 2 cut(s) 1678, 1679
AsuHPI GGTGA 5 cut(s) 265, 379, 565, 1134, 1592
AsuII TTCGAA 1 cut(s) 1385
AsuNHI GCTAGC 1 cut(s) 736
AvaI CYCGRG 1 cut(s) 1677
BalI TGGCCA 1 cut(s) 220
BamHI GGATCC 1 cut(s) 319
BanI GGYRCC 1 cut(s) 272
BbsI GAAGAC 3 cut(s) 8, 235, 800
Bbv12I GWGCWC 1 cut(s) 1177
BbvI GCAGC 6 cut(s) 183, 219, 677, 785, 893, 1559
BccI CCATC 1 cut(s) 464
BciT130I CCWGG 1 cut(s) 1274
BciVI GTATCC 1 cut(s) 1477
BclI TGATCA 1 cut(s) 1321
BcnI CCSGG 2 cut(s) 1678, 1679
BcoDI GTCTC 4 cut(s) 101, 314, 680, 1577
BfaI CTAG 3 cut(s) 444, 737, 1454
BfoI RGCGCY 1 cut(s) 1454
BfuAI ACCTGC 1 cut(s) 1230
BfuI GTATCC 1 cut(s) 1477
BglII AGATCT 1 cut(s) 623
BisI GCNGC 6 cut(s) 197, 233, 666, 774, 882, 1573
BlsI GCNGC 6 cut(s) 198, 234, 667, 775, 883, 1574
Bme1390I CCNGG 3 cut(s) 1274, 1678, 1679
BmeT110I CYCGRG 1 cut(s) 1677
BmiI GGNNCC 4 cut(s) 274, 321, 1271, 1338
BmrFI CCNGG 3 cut(s) 1274, 1678, 1679
BmrI ACTGGG 2 cut(s) 20, 1132
BmsI GCATC 4 cut(s) 742, 850, 958, 1243
BmtI GCTAGC 1 cut(s) 740
BmuI ACTGGG 2 cut(s) 20, 1132
BoxI GACNNNNGTC 2 cut(s) 725, 941
BpiI GAAGAC 3 cut(s) 8, 235, 800
BpmI CTGGAG 1 cut(s) 704
Bpu14I TTCGAA 1 cut(s) 1385
BpuEI CTTGAG 1 cut(s) 1589
BpuMI CCSGG 2 cut(s) 1678, 1679
BsaJI CCNNGG 7 cut(s) 315, 363, 495, 925, 1676, 1677, 1678
BsaXI ACNNNNNCTCC 2 cut(s) 895, 925
Bsc4I CCNNNNNNNGG 5 cut(s) 518, 992, 1361, 1548, 1654
Bse1I ACTGG 4 cut(s) 15, 555, 1106, 1138
Bse3DI GCAATG 1 cut(s) 1480
BseBI CCWGG 1 cut(s) 1274
BseDI CCNNGG 7 cut(s) 315, 363, 495, 925, 1676, 1677, 1678
BseGI GGATG 1 cut(s) 1132
BseLI CCNNNNNNNGG 5 cut(s) 518, 992, 1361, 1548, 1654
BseMI GCAATG 1 cut(s) 1480
BseMII CTCAG 1 cut(s) 378
BseNI ACTGG 4 cut(s) 15, 555, 1106, 1138
BseXI GCAGC 6 cut(s) 183, 219, 677, 785, 893, 1559
BseYI CCCAGC 2 cut(s) 1297, 1404
BsgI GTGCAG 1 cut(s) 563
Bsh1236I CGCG 1 cut(s) 1697
BshFI GGCC 3 cut(s) 58, 220, 1479
BshNI GGYRCC 1 cut(s) 272
BsiHKAI GWGCWC 1 cut(s) 1177
BsiHKCI CYCGRG 1 cut(s) 1677
BsiSI CCGG 1 cut(s) 1678
BslI CCNNNNNNNGG 5 cut(s) 518, 992, 1361, 1548, 1654
BsmAI GTCTC 4 cut(s) 101, 314, 680, 1577
BsmI GAATGC 1 cut(s) 209
BsnI GGCC 3 cut(s) 58, 220, 1479
BsoBI CYCGRG 1 cut(s) 1677
Bsp119I TTCGAA 1 cut(s) 1385
Bsp1286I GDGCHC 1 cut(s) 1177
Bsp143I GATC 5 cut(s) 150, 165, 319, 623, 1321
Bsp19I CCATGG 2 cut(s) 315, 495
BspACI CCGC 6 cut(s) 352, 692, 723, 908, 939, 1695
BspANI GGCC 3 cut(s) 58, 220, 1479
BspCNI CTCAG 1 cut(s) 379
BspFNI CGCG 1 cut(s) 1697
BspLI GGNNCC 4 cut(s) 274, 321, 1271, 1338
BspMI ACCTGC 1 cut(s) 1230
BspOI GCTAGC 1 cut(s) 740
BspPI GGATC 3 cut(s) 158, 314, 327
BspT104I TTCGAA 1 cut(s) 1385
BspT107I GGYRCC 1 cut(s) 272
BsrDI GCAATG 1 cut(s) 1480
BsrI ACTGG 4 cut(s) 15, 555, 1106, 1138
BssECI CCNNGG 7 cut(s) 315, 363, 495, 925, 1676, 1677, 1678
BssMI GATC 5 cut(s) 150, 165, 319, 623, 1321
BssT1I CCWWGG 4 cut(s) 315, 363, 495, 925
Bst2UI CCWGG 1 cut(s) 1274
Bst4CI ACNGT 5 cut(s) 272, 610, 655, 1078, 1087
BstAPI GCANNNNNTGC 1 cut(s) 1572
BstBI TTCGAA 1 cut(s) 1385
BstC8I GCNNGC 2 cut(s) 738, 1401
BstDEI CTNAG 1 cut(s) 387
BstDSI CCRYGG 2 cut(s) 315, 495
BstEII GGTNACC 1 cut(s) 1186
BstENI CCTNNNNNAGG 1 cut(s) 1652
BstF5I GGATG 1 cut(s) 1132
BstFNI CGCG 1 cut(s) 1697
BstH2I RGCGCY 1 cut(s) 1454
BstHHI GCGC 4 cut(s) 31, 1453, 1556, 1577
BstKTI GATC 5 cut(s) 153, 168, 322, 626, 1324
BstMAI GTCTC 4 cut(s) 101, 314, 680, 1577
BstMBI GATC 5 cut(s) 150, 165, 319, 623, 1321
BstMWI GCNNNNNNNGC 5 cut(s) 1262, 1307, 1405, 1470, 1572
BstNI CCWGG 1 cut(s) 1274
BstNSI RCATGY 3 cut(s) 185, 1200, 1397
BstPAI GACNNNNGTC 2 cut(s) 725, 941
BstPI GGTNACC 1 cut(s) 1186
BstSCI CCNGG 3 cut(s) 1272, 1676, 1677
BstUI CGCG 1 cut(s) 1697
BstV1I GCAGC 6 cut(s) 183, 219, 677, 785, 893, 1559
BstV2I GAAGAC 3 cut(s) 8, 235, 800
BstX2I RGATCY 2 cut(s) 319, 623
BstYI RGATCY 2 cut(s) 319, 623
BsuI GTATCC 1 cut(s) 1477
BsuRI GGCC 3 cut(s) 58, 220, 1479
BtgI CCRYGG 2 cut(s) 315, 495
BtsCI GGATG 1 cut(s) 1132
BtsI GCAGTG 2 cut(s) 950, 1029
BtsIMutI CAGTG 5 cut(s) 606, 736, 950, 1029, 1256
BveI ACCTGC 1 cut(s) 1230
Cac8I GCNNGC 2 cut(s) 738, 1401
CaiI CAGNNNCTG 1 cut(s) 550
CfoI GCGC 4 cut(s) 31, 1453, 1556, 1577
Cfr9I CCCGGG 1 cut(s) 1677
Csp6I GTAC 1 cut(s) 1514
CviAII CATG 9 cut(s) 54, 182, 226, 306, 316, 496, 1197, 1394, 1591
CviQI GTAC 1 cut(s) 1514
DdeI CTNAG 1 cut(s) 387
DpnI GATC 5 cut(s) 152, 167, 321, 625, 1323
DpnII GATC 5 cut(s) 150, 165, 319, 623, 1321
EaeI YGGCCR 1 cut(s) 218
EciI GGCGGA 2 cut(s) 681, 897
Eco130I CCWWGG 4 cut(s) 315, 363, 495, 925
Eco32I GATATC 1 cut(s) 532
Eco57I CTGAAG 2 cut(s) 812, 1502
Eco88I CYCGRG 1 cut(s) 1677
Eco91I GGTNACC 1 cut(s) 1186
EcoNI CCTNNNNNAGG 1 cut(s) 1652
EcoO65I GGTNACC 1 cut(s) 1186
EcoRI GAATTC 5 cut(s) 678, 786, 894, 1213, 1537
EcoRII CCWGG 1 cut(s) 1272
EcoRV GATATC 1 cut(s) 532
EcoT14I CCWWGG 4 cut(s) 315, 363, 495, 925
ErhI CCWWGG 4 cut(s) 315, 363, 495, 925
FaeI CATG 9 cut(s) 57, 185, 229, 309, 319, 499, 1200, 1397, 1594
FalI AAGNNNNNCTT 2 cut(s) 347, 379
FatI CATG 9 cut(s) 53, 181, 225, 305, 315, 495, 1196, 1393, 1590
FauNDI CATATG 2 cut(s) 1015, 1249
FbaI TGATCA 1 cut(s) 1321
FblI GTMKAC 1 cut(s) 452
Fnu4HI GCNGC 6 cut(s) 197, 233, 666, 774, 882, 1573
FokI GGATG 1 cut(s) 1119
Fsp4HI GCNGC 6 cut(s) 197, 233, 666, 774, 882, 1573
FspAI RTGCGCAY 1 cut(s) 1555
FspBI CTAG 3 cut(s) 444, 737, 1454
FspI TGCGCA 1 cut(s) 1555
GlaI GCGC 4 cut(s) 30, 1452, 1555, 1576
GluI GCNGC 6 cut(s) 197, 233, 666, 774, 882, 1573
GsaI CCCAGC 2 cut(s) 1301, 1408
GsuI CTGGAG 1 cut(s) 704
HaeII RGCGCY 1 cut(s) 1454
HaeIII GGCC 3 cut(s) 58, 220, 1479
HapII CCGG 1 cut(s) 1678
HhaI GCGC 4 cut(s) 31, 1453, 1556, 1577
Hin1II CATG 9 cut(s) 57, 185, 229, 309, 319, 499, 1200, 1397, 1594
Hin6I GCGC 4 cut(s) 29, 1451, 1554, 1575
HinP1I GCGC 4 cut(s) 29, 1451, 1554, 1575
HincII GTYRAC 4 cut(s) 453, 720, 936, 1523
HindII GTYRAC 4 cut(s) 453, 720, 936, 1523
HinfI GANTC 4 cut(s) 359, 688, 796, 904
HpaII CCGG 1 cut(s) 1678
HphI GGTGA 5 cut(s) 265, 379, 565, 1134, 1592
Hpy166II GTNNAC 9 cut(s) 8, 453, 521, 720, 936, 950, 1167, 1421, 1523
Hpy188I TCNGA 4 cut(s) 124, 388, 792, 1321
Hpy188III TCNNGA 4 cut(s) 106, 683, 1156, 1505
Hpy8I GTNNAC 9 cut(s) 8, 453, 521, 720, 936, 950, 1167, 1421, 1523
Hpy99I CGWCG 1 cut(s) 457
HpyAV CCTTC 6 cut(s) 349, 416, 556, 705, 1477, 1605
HpyCH4III ACNGT 5 cut(s) 272, 610, 655, 1078, 1087
HpyF10VI GCNNNNNNNGC 5 cut(s) 1262, 1307, 1405, 1470, 1572
HpyF3I CTNAG 1 cut(s) 387
Hsp92II CATG 9 cut(s) 57, 185, 229, 309, 319, 499, 1200, 1397, 1594
HspAI GCGC 4 cut(s) 29, 1451, 1554, 1575
Ksp22I TGATCA 1 cut(s) 1321
Kzo9I GATC 5 cut(s) 150, 165, 319, 623, 1321
LmnI GCTCC 2 cut(s) 36, 1336
Lsp1109I GCAGC 6 cut(s) 183, 219, 677, 785, 893, 1559
LweI GCATC 4 cut(s) 742, 850, 958, 1243
MaeI CTAG 3 cut(s) 444, 737, 1454
MaeIII GTNAC 4 cut(s) 843, 1140, 1186, 1378
MalI GATC 5 cut(s) 152, 167, 321, 625, 1323
MboI GATC 5 cut(s) 150, 165, 319, 623, 1321
MboII GAAGA 7 cut(s) 8, 81, 235, 618, 687, 805, 1039
MflI RGATCY 2 cut(s) 319, 623
MhlI GDGCHC 1 cut(s) 1177
MlsI TGGCCA 1 cut(s) 220
MluNI TGGCCA 1 cut(s) 220
MlyI GAGTC 4 cut(s) 368, 682, 790, 898
MmeI TCCRAC 2 cut(s) 1096, 1106
Mox20I TGGCCA 1 cut(s) 220
MroXI GAANNNNTTC 1 cut(s) 378
MscI TGGCCA 1 cut(s) 220
MseI TTAA 3 cut(s) 137, 479, 1095
Msp20I TGGCCA 1 cut(s) 220
MspI CCGG 1 cut(s) 1678
MspR9I CCNGG 3 cut(s) 1274, 1678, 1679
Mva1269I GAATGC 1 cut(s) 209
MvaI CCWGG 1 cut(s) 1274
MvnI CGCG 1 cut(s) 1697
MwoI GCNNNNNNNGC 5 cut(s) 1262, 1307, 1405, 1470, 1572
NciI CCSGG 2 cut(s) 1678, 1679
NcoI CCATGG 2 cut(s) 315, 495
NdeI CATATG 2 cut(s) 1015, 1249
NdeII GATC 5 cut(s) 150, 165, 319, 623, 1321
NheI GCTAGC 1 cut(s) 736
NlaIII CATG 9 cut(s) 57, 185, 229, 309, 319, 499, 1200, 1397, 1594
NlaIV GGNNCC 4 cut(s) 274, 321, 1271, 1338
NmuCI GTSAC 1 cut(s) 1140
NsbI TGCGCA 1 cut(s) 1555
NspI RCATGY 3 cut(s) 185, 1200, 1397
NspV TTCGAA 1 cut(s) 1385
PaqCI CACCTGC 1 cut(s) 1230
PciI ACATGT 2 cut(s) 1196, 1393
PctI GAATGC 1 cut(s) 209
PdmI GAANNNNTTC 1 cut(s) 378
PflMI CCANNNNNTGG 1 cut(s) 518
PkrI GCNGC 6 cut(s) 198, 234, 667, 775, 883, 1574
PleI GAGTC 4 cut(s) 367, 682, 790, 898
PpsI GAGTC 4 cut(s) 367, 682, 790, 898
PscI ACATGT 2 cut(s) 1196, 1393
PshAI GACNNNNGTC 2 cut(s) 725, 941
PshBI ATTAAT 1 cut(s) 1095
Psp6I CCWGG 1 cut(s) 1272
PspEI GGTNACC 1 cut(s) 1186
PspFI CCCAGC 2 cut(s) 1297, 1404
PspGI CCWGG 1 cut(s) 1272
PspN4I GGNNCC 4 cut(s) 274, 321, 1271, 1338
PstNI CAGNNNCTG 1 cut(s) 550
PsuI RGATCY 2 cut(s) 319, 623
RsaI GTAC 1 cut(s) 1515
RsaNI GTAC 1 cut(s) 1514
SalI GTCGAC 1 cut(s) 451
SaqAI TTAA 3 cut(s) 137, 479, 1095
SatI GCNGC 6 cut(s) 197, 233, 666, 774, 882, 1573
Sau3AI GATC 5 cut(s) 150, 165, 319, 623, 1321
SchI GAGTC 4 cut(s) 368, 682, 790, 898
ScrFI CCNGG 3 cut(s) 1274, 1678, 1679
SduI GDGCHC 1 cut(s) 1177
SfaNI GCATC 4 cut(s) 742, 850, 958, 1243
SfuI TTCGAA 1 cut(s) 1385
SmaI CCCGGG 1 cut(s) 1679
SmlI CTYRAG 1 cut(s) 1604
SmoI CTYRAG 1 cut(s) 1604
SsiI CCGC 6 cut(s) 352, 692, 723, 908, 939, 1695
SspI AATATT 1 cut(s) 466
SspMI CTAG 3 cut(s) 444, 737, 1454
StyD4I CCNGG 3 cut(s) 1272, 1676, 1677
StyI CCWWGG 4 cut(s) 315, 363, 495, 925
TaaI ACNGT 5 cut(s) 272, 610, 655, 1078, 1087
TaqI TCGA 3 cut(s) 105, 452, 1385
Tru1I TTAA 3 cut(s) 137, 479, 1095
Tru9I TTAA 3 cut(s) 137, 479, 1095
TscAI CASTG 5 cut(s) 613, 736, 957, 1029, 1263
TseFI GTSAC 1 cut(s) 1140
TseI GCWGC 6 cut(s) 196, 232, 665, 773, 881, 1572
Tsp45I GTSAC 1 cut(s) 1140
TspDTI ATGAA 7 cut(s) 206, 435, 1113, 1236, 1404, 1644, 1682
TspGWI ACGGA 1 cut(s) 831
TspMI CCCGGG 1 cut(s) 1677
TspRI CASTG 5 cut(s) 613, 736, 957, 1029, 1263
Van91I CCANNNNNTGG 1 cut(s) 518
VspI ATTAAT 1 cut(s) 1095
XagI CCTNNNNNAGG 1 cut(s) 1652
XapI RAATTY 8 cut(s) 112, 678, 786, 894, 1207, 1213, 1412, 1537
XceI RCATGY 3 cut(s) 185, 1200, 1397
XmaI CCCGGG 1 cut(s) 1677
XmiI GTMKAC 1 cut(s) 452
XmnI GAANNNNTTC 1 cut(s) 378
XspI CTAG 3 cut(s) 444, 737, 1454
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.