Rmu_sc0004376.1_g000014

HVA22-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004376.1
OG0000440
Physical Location & Seq
Reverse (-)
68499 .. 74210
5712 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004376.1_g000014.1.cds

Sequence Viewer

Length: 2133 bp
atgaagtctttatcaaagaaagagcaggaattcgatgagacttcaaagaagaattcaaagcaaatggagacattgaatgcatttcatttcatttcgctctcggaagggttcaatttatctcctatgttcgaggagaaggaggagctgagattcgctatgacggggtcggcaagcagcggttttcgaaacttctgtttcgacaggcggcggcgcacttcccttgggcaaggcagcgttcgtggtgtggcattttactacggcggcgcggagcaatactcaagcgtagatcgtatttgcggcgagaagctctcgttttggggcctctttgatcgtgtttcagagaggggcaatcgtgtcaaggtctgcgtcacagctacttcacaggcgttctgcgaagggcggcaagttgtttctttagagaaacgattttctacaggtcgatctgggagggaaggtaggatgatgggctcagctccgtttcgggtaaccaaggcaggccaagttttggcccaagctttggtggaacggccggagtcggctgcccgtagccatacgaagacgctgaagctcaagatgggcttactgggtcttgttggatttgcgctccaatgctttggtgttcttgcatggcctctctttgctctggtctatcctctgtattcttccattagagcaatcgagacaaattccattacagatactcacaagataaatacttattgggttgtcttctcattgatcttgctatttgagcatgcttttatgaagcttcttgaatggttcctgctatggccatacattaggctactgattgtcttctttttggtgatgccccattttgatggtgccttatatgtctataaacaccttatctgtccatgcctctccatggatccccaaattgttatcaactcattcaacaagctgaaggagtcctttgtgagggataactttctctctgaggtggagagatatgtaaaggaaaatggacctgaaagtttggaaaaatttattccttgcaagtcaacaaggacaaatctcgatgtacaagagttcaatgcagtttcatccatggataatgaagcgtcaaaatccttaaagccgaatgatcgacagaatgatatcaaagctgtgccggtaacggcaaaaaagaaggaaacaactgctactcaagcagagcctaatctcactgtgaatgaagatggattttcttctaggaagatgaatgaaaaagtcatcgaagttgcagccgacagggaaattctgaagactccgcctccaatgagagtccagaaggagtggaccacagtcaatccggtgcaaactcaaactgatgcaactttgaattcccctctcggtgataataaacacaagcctccaatgagagtccagacggagtggaccacagtcaatccggtgcaaactcaaactgatgcaactttgaattcccctctcgatgataataaacacaaggctacatacgaggcactgaacataaagaatgaggcagagcctaagctcactttccctgaaaaccgtactattgcaggtatagaagatccagagtctcctaaagaagtccagaaagagtggacttgtgctctctgtcaggtaactacttcaagtgaaagcattttgaattcccacctgcaagggagaagacacaaggcagcatatgaggcactgaaagcaaggaaccaggcatttgtgtccaagattgccccagcttcaactgcagaaacatccaatcaaccgaataaggagccaggaaagagtattccgagcagtggatcaaaacaaaaagttcctgtaagtgaaaatgtgcaaggccagaaaaatagtagtccagctccaatcacaaagaagcaccacaaacagaaagaggagcacgcagacggtgtatccagcaatggccagaaagggaaaattcctatacacgtcgagaaggtacaaagtcaacaaacgaagccaaataaagttccaaggctgaagagttctcctttgtggtgcgcaatttgtagcatacgctgtcctggtgagattgacttgctgtctcatctcaacggaaaaaaacacaaggaaaaggtgcaagaactactagagaacctaatcaagcccagggaccctacgtaa

Protein Analysis

710

Amino Acids

79.85

Weight (kDa)

9.23

Isoelectric Point (pI)

38.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000440)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20313 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_5g25851
prunus_persica Prupe.8G072900_v2.0.a1 Prupe.8G072900_v2.0.a1 Prupe.8G072900_v2.0.a1 Prupe.8G073000_v2.0.a1 Prupe.8G073000_v2.0.a1 Prupe.8G073000_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1
pyrus_communis pycom01g01210 pycom02g12000 pycom10g21410 pycom11g11060 pycom13g24280
rosa_chinensis RchiOBHm_Chr3g0461871 RchiOBHm_Chr4g0427221 RchiOBHm_Chr4g0427231 RchiOBHm_Chr6g0270081 RchiOBHm_Chr6g0270121 RchiOBHm_Chr6g0270151 RchiOBHm_Chr6g0270161 RchiOBHm_Chr6g0270171 RchiOBHm_Chr6g0270181 RchiOBHm_Chr6g0270191 RchiOBHm_Chr7g0229301
rosa_laevigata RLG00000013809 RLG00000013810 RLG00000013812 RLG00000013814 RLG00000013817 RLG00000013818
rosa_multiflora Rmu_sc0000918.1_g000004 Rmu_sc0000918.1_g000019 Rmu_sc0000918.1_g000027 Rmu_sc0002817.1_g000013 Rmu_sc0004366.1_g000009 Rmu_sc0004376.1_g000011 Rmu_sc0004376.1_g000014 Rmu_sc0004376.1_g000021 Rmu_sc0006909.1_g000002 Rmu_sc0011356.1_g000003 Rmu_sc0011369.1_g000005 Rmu_sc0017552.1_g000001
rosa_roxburghii Rroxscaffold_5G00354200 Rroxscaffold_7G00198080 Rroxscaffold_7G00198090 Rroxscaffold_7G00198100 Rroxscaffold_7G00198130 Rroxscaffold_7G00198170
rosa_rugosa Rorug06G0052400 Rorug06G0052500 Rorug06G0053000
rosa_samantha Rh6AG171300 Rh6AG171400 Rh6AG171800 Rh6AG171900 Rh6AG172000 Rh6AG172100 Rh6AG369700 Rh6BG175800 Rh6BG175900 Rh6BG176200 Rh6BG176300 Rh6CG170900 Rh6CG171100 Rh6CG171400 Rh6CG171500 Rh6CG171700 Rh6CG171900 Rh6CG172000 Rh6CG172100
rosa_wichuraiana Rw6G014730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1656
Acc16I TGCGCA 1 cut(s) 2011
Acc36I ACCTGC 2 cut(s) 1538, 1656
AccB1I GGYRCC 1 cut(s) 845
AccB7I CCANNNNNTGG 2 cut(s) 505, 517
AccII CGCG 1 cut(s) 266
AciI CCGC 8 cut(s) 177, 205, 208, 261, 266, 297, 400, 1274
AclWI GGATC 4 cut(s) 887, 900, 1553, 1798
AcoI YGGCCR 3 cut(s) 527, 791, 1912
AcsI RAATTY 9 cut(s) 29, 52, 685, 1007, 1260, 1345, 1444, 1639, 1926
AcuI CTGAAG 4 cut(s) 584, 947, 1286, 2009
AfaI GTAC 3 cut(s) 1047, 1540, 1950
AfiI CCNNNNNNNGG 5 cut(s) 505, 517, 889, 942, 1787
AflIII ACRYGT 1 cut(s) 1936
AhdI GACNNNNNGTC 1 cut(s) 2050
AjiI CACGTC 1 cut(s) 1939
AjnI CCWGG 4 cut(s) 1698, 1765, 2032, 2117
Alw21I GWGCWC 2 cut(s) 1603, 1890
Alw26I GTCTC 5 cut(s) 32, 62, 674, 1572, 2058
AlwI GGATC 4 cut(s) 887, 900, 1553, 1798
AoxI GGCC 8 cut(s) 319, 496, 507, 527, 629, 791, 1828, 1912
ApeKI GCWGC 5 cut(s) 174, 231, 539, 1247, 1670
ApoI RAATTY 9 cut(s) 29, 52, 685, 1007, 1260, 1345, 1444, 1639, 1926
AspLEI GCGC 4 cut(s) 213, 266, 604, 2012
AspS9I GGNCC 6 cut(s) 319, 508, 989, 1302, 1401, 2122
AsuHPI GGTGA 3 cut(s) 838, 1370, 2048
AsuII TTCGAA 1 cut(s) 184
AvaII GGWCC 4 cut(s) 989, 1302, 1401, 2122
BalI TGGCCA 2 cut(s) 793, 1914
BamHI GGATCC 1 cut(s) 892
BanI GGYRCC 1 cut(s) 845
BanII GRGCYC 1 cut(s) 470
BbsI GAAGAC 5 cut(s) 563, 721, 808, 1274, 1666
Bbv12I GWGCWC 2 cut(s) 1603, 1890
BbvI GCAGC 5 cut(s) 186, 243, 526, 1259, 1682
BccI CCATC 4 cut(s) 457, 568, 836, 1196
BceAI ACGGC 3 cut(s) 274, 542, 1158
BciT130I CCWGG 4 cut(s) 1700, 1767, 2034, 2119
BciVI GTATCC 1 cut(s) 1912
BcoDI GTCTC 5 cut(s) 32, 62, 674, 1572, 2058
BfaI CTAG 2 cut(s) 1215, 2099
BfmI CTRYAG 2 cut(s) 432, 1734
BfuAI ACCTGC 2 cut(s) 1538, 1656
BfuI GTATCC 1 cut(s) 1912
BlpI GCTNAGC 1 cut(s) 469
Bme1390I CCNGG 4 cut(s) 1700, 1767, 2034, 2119
Bme18I GGWCC 4 cut(s) 989, 1302, 1401, 2122
BmeRI GACNNNNNGTC 1 cut(s) 2050
BmgBI CACGTC 1 cut(s) 1939
BmgT120I GGNCC 6 cut(s) 319, 508, 989, 1302, 1401, 2122
BmiI GGNNCC 8 cut(s) 320, 782, 847, 894, 1697, 1764, 2123, 2124
BmrFI CCNGG 4 cut(s) 1700, 1767, 2034, 2119
BmrI ACTGGG 1 cut(s) 593
BmsI GCATC 3 cut(s) 819, 1324, 1423
BmuI ACTGGG 1 cut(s) 593
BoxI GACNNNNGTC 2 cut(s) 1307, 1406
BpiI GAAGAC 5 cut(s) 563, 721, 808, 1274, 1666
BplI GAGNNNNNCTC 4 cut(s) 260, 292, 293, 325
Bpu10I CCTNAGC 1 cut(s) 1515
Bpu1102I GCTNAGC 1 cut(s) 469
Bpu14I TTCGAA 1 cut(s) 184
BpuEI CTTGAG 3 cut(s) 262, 554, 1155
BsaAI YACGTR 1 cut(s) 2130
BsaJI CCNNGG 7 cut(s) 220, 489, 888, 1071, 1982, 2117, 2118
BsaWI WCCGGW 2 cut(s) 1315, 1414
BsaXI ACNNNNNCTCC 4 cut(s) 439, 469, 1261, 1291
Bsc4I CCNNNNNNNGG 5 cut(s) 505, 517, 889, 942, 1787
Bse118I RCCGGY 1 cut(s) 1135
Bse1I ACTGG 1 cut(s) 588
Bse3DI GCAATG 1 cut(s) 1915
BseBI CCWGG 4 cut(s) 1700, 1767, 2034, 2119
BseDI CCNNGG 7 cut(s) 220, 489, 888, 1071, 1982, 2117, 2118
BseGI GGATG 3 cut(s) 465, 1067, 1742
BseLI CCNNNNNNNGG 5 cut(s) 505, 517, 889, 942, 1787
BseMI GCAATG 1 cut(s) 1915
BseMII CTCAG 3 cut(s) 137, 483, 951
BseNI ACTGG 1 cut(s) 588
BseRI GAGGAG 3 cut(s) 146, 155, 1898
BseX3I CGGCCG 1 cut(s) 527
BseXI GCAGC 5 cut(s) 186, 243, 526, 1259, 1682
BseYI CCCAGC 1 cut(s) 1723
Bsh1236I CGCG 1 cut(s) 266
Bsh1285I CGRYCG 1 cut(s) 530
BshFI GGCC 8 cut(s) 321, 498, 509, 529, 631, 793, 1830, 1914
BshNI GGYRCC 1 cut(s) 845
BsiEI CGRYCG 1 cut(s) 530
BsiHKAI GWGCWC 2 cut(s) 1603, 1890
BsiSI CCGG 4 cut(s) 530, 1136, 1316, 1415
BslI CCNNNNNNNGG 5 cut(s) 505, 517, 889, 942, 1787
BsmAI GTCTC 5 cut(s) 32, 62, 674, 1572, 2058
BsmI GAATGC 1 cut(s) 82
BsnI GGCC 8 cut(s) 321, 498, 509, 529, 631, 793, 1830, 1914
Bsp119I TTCGAA 1 cut(s) 184
Bsp1286I GDGCHC 3 cut(s) 470, 1603, 1890
Bsp1407I TGTACA 1 cut(s) 1045
Bsp143I GATC 8 cut(s) 286, 328, 440, 738, 892, 1108, 1558, 1790
Bsp1720I GCTNAGC 1 cut(s) 469
Bsp19I CCATGG 2 cut(s) 888, 1071
BspACI CCGC 8 cut(s) 177, 205, 208, 261, 266, 297, 400, 1274
BspANI GGCC 8 cut(s) 321, 498, 509, 529, 631, 793, 1830, 1914
BspCNI CTCAG 3 cut(s) 138, 482, 952
BspFNI CGCG 1 cut(s) 266
BspLI GGNNCC 8 cut(s) 320, 782, 847, 894, 1697, 1764, 2123, 2124
BspMAI CTGCAG 1 cut(s) 1738
BspMI ACCTGC 2 cut(s) 1538, 1656
BspPI GGATC 4 cut(s) 887, 900, 1553, 1798
BspT104I TTCGAA 1 cut(s) 184
BspT107I GGYRCC 1 cut(s) 845
BsrDI GCAATG 1 cut(s) 1915
BsrFI RCCGGY 1 cut(s) 1135
BsrGI TGTACA 1 cut(s) 1045
BsrI ACTGG 1 cut(s) 588
BssAI RCCGGY 1 cut(s) 1135
BssECI CCNNGG 7 cut(s) 220, 489, 888, 1071, 1982, 2117, 2118
BssMI GATC 8 cut(s) 286, 328, 440, 738, 892, 1108, 1558, 1790
BssT1I CCWWGG 5 cut(s) 220, 489, 888, 1071, 1982
Bst2UI CCWGG 4 cut(s) 1700, 1767, 2034, 2119
Bst4CI ACNGT 5 cut(s) 1192, 1309, 1408, 1538, 1898
Bst6I CTCTTC 1 cut(s) 1985
BstAUI TGTACA 1 cut(s) 1045
BstBAI YACGTR 1 cut(s) 2130
BstBI TTCGAA 1 cut(s) 184
BstC8I GCNNGC 4 cut(s) 172, 496, 756, 1890
BstDEI CTNAG 4 cut(s) 146, 469, 960, 1515
BstDSI CCRYGG 2 cut(s) 888, 1071
BstEII GGTNACC 1 cut(s) 484
BstENI CCTNNNNNAGG 1 cut(s) 940
BstF5I GGATG 3 cut(s) 465, 1067, 1742
BstFNI CGCG 1 cut(s) 266
BstHHI GCGC 4 cut(s) 213, 266, 604, 2012
BstKTI GATC 8 cut(s) 289, 331, 443, 741, 895, 1111, 1561, 1793
BstMAI GTCTC 5 cut(s) 32, 62, 674, 1572, 2058
BstMBI GATC 8 cut(s) 286, 328, 440, 738, 892, 1108, 1558, 1790
BstMCI CGRYCG 1 cut(s) 530
BstMWI GCNNNNNNNGC 5 cut(s) 751, 1172, 1679, 1688, 1733
BstNI CCWGG 4 cut(s) 1700, 1767, 2034, 2119
BstNSI RCATGY 1 cut(s) 758
BstPAI GACNNNNGTC 2 cut(s) 1307, 1406
BstPI GGTNACC 1 cut(s) 484
BstSCI CCNGG 4 cut(s) 1698, 1765, 2032, 2117
BstSFI CTRYAG 2 cut(s) 432, 1734
BstSNI TACGTA 1 cut(s) 2130
BstUI CGCG 1 cut(s) 266
BstV1I GCAGC 5 cut(s) 186, 243, 526, 1259, 1682
BstV2I GAAGAC 5 cut(s) 563, 721, 808, 1274, 1666
BstX2I RGATCY 2 cut(s) 892, 1558
BstXI CCANNNNNNTGG 2 cut(s) 614, 842
BstYI RGATCY 2 cut(s) 892, 1558
BstZI CGGCCG 1 cut(s) 527
BsuI GTATCC 1 cut(s) 1912
BsuRI GGCC 8 cut(s) 321, 498, 509, 529, 631, 793, 1830, 1914
BtgI CCRYGG 2 cut(s) 888, 1071
BtrI CACGTC 1 cut(s) 1939
BtsCI GGATG 3 cut(s) 465, 1067, 1742
BtsI GCAGTG 1 cut(s) 1792
BtsIMutI CAGTG 4 cut(s) 1188, 1487, 1682, 1792
BveI ACCTGC 2 cut(s) 1538, 1656
Cac8I GCNNGC 4 cut(s) 172, 496, 756, 1890
CfoI GCGC 4 cut(s) 213, 266, 604, 2012
Cfr10I RCCGGY 1 cut(s) 1135
Cfr13I GGNCC 6 cut(s) 319, 508, 989, 1302, 1401, 2122
CseI GACGC 3 cut(s) 355, 568, 1074
Csp6I GTAC 3 cut(s) 1046, 1539, 1949
CviAII CATG 5 cut(s) 627, 755, 879, 889, 1072
CviQI GTAC 3 cut(s) 1046, 1539, 1949
DdeI CTNAG 4 cut(s) 146, 469, 960, 1515
DpnI GATC 8 cut(s) 288, 330, 442, 740, 894, 1110, 1560, 1792
DpnII GATC 8 cut(s) 286, 328, 440, 738, 892, 1108, 1558, 1790
DriI GACNNNNNGTC 1 cut(s) 2050
EaeI YGGCCR 3 cut(s) 527, 791, 1912
EagI CGGCCG 1 cut(s) 527
Eam1104I CTCTTC 1 cut(s) 1985
Eam1105I GACNNNNNGTC 1 cut(s) 2050
EarI CTCTTC 1 cut(s) 1985
EciI GGCGGA 1 cut(s) 1263
EclXI CGGCCG 1 cut(s) 527
Eco105I TACGTA 1 cut(s) 2130
Eco130I CCWWGG 5 cut(s) 220, 489, 888, 1071, 1982
Eco24I GRGCYC 1 cut(s) 470
Eco32I GATATC 1 cut(s) 1123
Eco47I GGWCC 4 cut(s) 989, 1302, 1401, 2122
Eco52I CGGCCG 1 cut(s) 527
Eco57I CTGAAG 4 cut(s) 584, 947, 1286, 2009
Eco91I GGTNACC 1 cut(s) 484
EcoNI CCTNNNNNAGG 1 cut(s) 940
EcoO109I RGGNCCY 2 cut(s) 319, 2122
EcoO65I GGTNACC 1 cut(s) 484
EcoRI GAATTC 5 cut(s) 29, 52, 1345, 1444, 1639
EcoRII CCWGG 4 cut(s) 1698, 1765, 2032, 2117
EcoRV GATATC 1 cut(s) 1123
EcoT14I CCWWGG 5 cut(s) 220, 489, 888, 1071, 1982
EcoT22I ATGCAT 1 cut(s) 82
EcoT38I GRGCYC 1 cut(s) 470
ErhI CCWWGG 5 cut(s) 220, 489, 888, 1071, 1982
FaeI CATG 5 cut(s) 630, 758, 882, 892, 1075
FalI AAGNNNNNCTT 4 cut(s) 563, 595, 920, 952
FatI CATG 5 cut(s) 626, 754, 878, 888, 1071
FauNDI CATATG 1 cut(s) 1675
FokI GGATG 3 cut(s) 472, 1054, 1729
FriOI GRGCYC 1 cut(s) 470
FspBI CTAG 2 cut(s) 1215, 2099
FspI TGCGCA 1 cut(s) 2011
GlaI GCGC 4 cut(s) 212, 265, 603, 2011
GsaI CCCAGC 1 cut(s) 1727
HaeIII GGCC 8 cut(s) 321, 498, 509, 529, 631, 793, 1830, 1914
HapII CCGG 4 cut(s) 530, 1136, 1316, 1415
HgaI GACGC 3 cut(s) 355, 568, 1074
HhaI GCGC 4 cut(s) 213, 266, 604, 2012
Hin1II CATG 5 cut(s) 630, 758, 882, 892, 1075
Hin6I GCGC 4 cut(s) 211, 264, 602, 2010
HinP1I GCGC 4 cut(s) 211, 264, 602, 2010
HincII GTYRAC 2 cut(s) 1026, 1958
HindII GTYRAC 2 cut(s) 1026, 1958
HindIII AAGCTT 2 cut(s) 513, 767
HinfI GANTC 7 cut(s) 150, 533, 932, 1270, 1287, 1386, 1565
HpaII CCGG 4 cut(s) 530, 1136, 1316, 1415
HphI GGTGA 3 cut(s) 838, 1370, 2048
Hpy166II GTNNAC 5 cut(s) 1026, 1302, 1401, 1593, 1958
Hpy188I TCNGA 5 cut(s) 103, 340, 961, 1266, 1782
Hpy8I GTNNAC 5 cut(s) 1026, 1302, 1401, 1593, 1958
Hpy99I CGWCG 1 cut(s) 1943
HpyAV CCTTC 8 cut(s) 98, 130, 389, 446, 922, 1147, 1288, 1939
HpyCH4III ACNGT 5 cut(s) 1192, 1309, 1408, 1538, 1898
HpyCH4IV ACGT 2 cut(s) 1938, 2129
HpyF10VI GCNNNNNNNGC 5 cut(s) 751, 1172, 1679, 1688, 1733
HpyF3I CTNAG 4 cut(s) 146, 469, 960, 1515
HpySE526I ACGT 2 cut(s) 1938, 2129
Hsp92II CATG 5 cut(s) 630, 758, 882, 892, 1075
HspAI GCGC 4 cut(s) 211, 264, 602, 2010
KflI GGGWCCC 1 cut(s) 2122
Kzo9I GATC 8 cut(s) 286, 328, 440, 738, 892, 1108, 1558, 1790
LmnI GCTCC 7 cut(s) 142, 268, 478, 609, 1762, 1855, 1885
Lsp1109I GCAGC 5 cut(s) 186, 243, 526, 1259, 1682
LweI GCATC 3 cut(s) 819, 1324, 1423
MaeI CTAG 2 cut(s) 1215, 2099
MaeII ACGT 2 cut(s) 1938, 2129
MaeIII GTNAC 4 cut(s) 367, 484, 1138, 1612
MalI GATC 8 cut(s) 288, 330, 442, 740, 894, 1110, 1560, 1792
MboI GATC 8 cut(s) 286, 328, 440, 738, 892, 1108, 1558, 1790
MflI RGATCY 2 cut(s) 892, 1558
MhlI GDGCHC 3 cut(s) 470, 1603, 1890
MlsI TGGCCA 2 cut(s) 793, 1914
MluNI TGGCCA 2 cut(s) 793, 1914
MlyI GAGTC 6 cut(s) 542, 941, 1264, 1296, 1395, 1574
MmeI TCCRAC 1 cut(s) 574
Mox20I TGGCCA 2 cut(s) 793, 1914
Mph1103I ATGCAT 1 cut(s) 82
MscI TGGCCA 2 cut(s) 793, 1914
MseI TTAA 1 cut(s) 1097
MslI CAYNNNNRTG 1 cut(s) 840
Msp20I TGGCCA 2 cut(s) 793, 1914
MspA1I CMGCKG 1 cut(s) 177
MspI CCGG 4 cut(s) 530, 1136, 1316, 1415
MspR9I CCNGG 4 cut(s) 1700, 1767, 2034, 2119
Mva1269I GAATGC 1 cut(s) 82
MvaI CCWGG 4 cut(s) 1700, 1767, 2034, 2119
MvnI CGCG 1 cut(s) 266
MwoI GCNNNNNNNGC 5 cut(s) 751, 1172, 1679, 1688, 1733
NcoI CCATGG 2 cut(s) 888, 1071
NdeI CATATG 1 cut(s) 1675
NdeII GATC 8 cut(s) 286, 328, 440, 738, 892, 1108, 1558, 1790
NlaIII CATG 5 cut(s) 630, 758, 882, 892, 1075
NlaIV GGNNCC 8 cut(s) 320, 782, 847, 894, 1697, 1764, 2123, 2124
NmuCI GTSAC 1 cut(s) 367
NsbI TGCGCA 1 cut(s) 2011
NsiI ATGCAT 1 cut(s) 82
NspI RCATGY 1 cut(s) 758
NspV TTCGAA 1 cut(s) 184
PaeI GCATGC 1 cut(s) 758
PaqCI CACCTGC 1 cut(s) 1656
PasI CCCWGGG 1 cut(s) 2118
PctI GAATGC 1 cut(s) 82
PfeI GAWTC 1 cut(s) 150
PflFI GACNNNGTC 1 cut(s) 163
PflMI CCANNNNNTGG 2 cut(s) 505, 517
PleI GAGTC 6 cut(s) 541, 940, 1264, 1295, 1394, 1573
PpsI GAGTC 6 cut(s) 541, 940, 1264, 1295, 1394, 1573
Ppu21I YACGTR 1 cut(s) 2130
PpuMI RGGWCCY 1 cut(s) 2122
PshAI GACNNNNGTC 2 cut(s) 1307, 1406
Psp5II RGGWCCY 1 cut(s) 2122
Psp6I CCWGG 4 cut(s) 1698, 1765, 2032, 2117
PspEI GGTNACC 1 cut(s) 484
PspFI CCCAGC 1 cut(s) 1723
PspGI CCWGG 4 cut(s) 1698, 1765, 2032, 2117
PspN4I GGNNCC 8 cut(s) 320, 782, 847, 894, 1697, 1764, 2123, 2124
PspPI GGNCC 6 cut(s) 319, 508, 989, 1302, 1401, 2122
PspPPI RGGWCCY 1 cut(s) 2122
PstI CTGCAG 1 cut(s) 1738
PsuI RGATCY 2 cut(s) 892, 1558
PsyI GACNNNGTC 1 cut(s) 163
RsaI GTAC 3 cut(s) 1047, 1540, 1950
RsaNI GTAC 3 cut(s) 1046, 1539, 1949
RseI CAYNNNNRTG 1 cut(s) 840
SaqAI TTAA 1 cut(s) 1097
Sau3AI GATC 8 cut(s) 286, 328, 440, 738, 892, 1108, 1558, 1790
Sau96I GGNCC 6 cut(s) 319, 508, 989, 1302, 1401, 2122
SchI GAGTC 6 cut(s) 542, 941, 1264, 1296, 1395, 1574
ScrFI CCNGG 4 cut(s) 1700, 1767, 2034, 2119
SduI GDGCHC 3 cut(s) 470, 1603, 1890
SfaNI GCATC 3 cut(s) 819, 1324, 1423
SfcI CTRYAG 2 cut(s) 432, 1734
SfuI TTCGAA 1 cut(s) 184
SinI GGWCC 4 cut(s) 989, 1302, 1401, 2122
SmiMI CAYNNNNRTG 1 cut(s) 840
SmlI CTYRAG 3 cut(s) 277, 569, 1170
SmoI CTYRAG 3 cut(s) 277, 569, 1170
SnaBI TACGTA 1 cut(s) 2130
SphI GCATGC 1 cut(s) 758
SsiI CCGC 8 cut(s) 177, 205, 208, 261, 266, 297, 400, 1274
SspMI CTAG 2 cut(s) 1215, 2099
StyD4I CCNGG 4 cut(s) 1698, 1765, 2032, 2117
StyI CCWWGG 5 cut(s) 220, 489, 888, 1071, 1982
TaaI ACNGT 5 cut(s) 1192, 1309, 1408, 1538, 1898
TaiI ACGT 2 cut(s) 1941, 2132
TatI WGTACW 1 cut(s) 1045
TauI GCSGC 5 cut(s) 208, 211, 264, 300, 403
TfiI GAWTC 1 cut(s) 150
Tru1I TTAA 1 cut(s) 1097
Tru9I TTAA 1 cut(s) 1097
TscAI CASTG 4 cut(s) 1195, 1494, 1689, 1792
TseFI GTSAC 1 cut(s) 367
TseI GCWGC 5 cut(s) 174, 231, 539, 1247, 1670
Tsp45I GTSAC 1 cut(s) 367
TspDTI ATGAA 9 cut(s) 17, 74, 79, 779, 1056, 1095, 1212, 1238, 1242
TspGWI ACGGA 3 cut(s) 465, 1409, 2079
TspRI CASTG 4 cut(s) 1195, 1494, 1689, 1792
Tth111I GACNNNGTC 1 cut(s) 163
Van91I CCANNNNNTGG 2 cut(s) 505, 517
VpaK11BI GGWCC 4 cut(s) 989, 1302, 1401, 2122
XagI CCTNNNNNAGG 1 cut(s) 940
XapI RAATTY 9 cut(s) 29, 52, 685, 1007, 1260, 1345, 1444, 1639, 1926
XceI RCATGY 1 cut(s) 758
XspI CTAG 2 cut(s) 1215, 2099
Zsp2I ATGCAT 1 cut(s) 82
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.