Rmu_sc0004376.1_g000011

HVA22-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004376.1
OG0000440
Physical Location & Seq
Reverse (-)
36289 .. 47184
10896 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004376.1_g000011.1.cds

Sequence Viewer

Length: 1647 bp
ctgtaccgtcaccggagctacgttttccagtcaggtccgaaaacctcaatctttgccgtcttgcagcgccgccgtggaggagaatctccgctagaggacaccagagggaggagcagacggctgagacgagctagtatggaaatattcactgccagagaccgctggaaacagccagaaaagtcgggtcgggtcgccgggttctggtcgggtcaggcggaaaacttagataccgaagcccgtaaccataggaagacgctgaagctcaagatgggcttactgggtcttgttggatttgcgctccaatgctttcatgttcttgcatggtacgctttctctacgacgatgaacacgttgtcaaaatccataaagccaaaaggtggacagaaagatatcaaagctgtgcaggtaatggtgaaaaagaaggaaacaactgctagccaagttagtcaggcaaagcctaatctcactgtgaatgaagataaattttcttctaggaagatgaatgaaaaagccattggggctgcagccgacagagaaattctggatactccacctccaaagaaagtccagaaggagtggaccacagtcagtccgctaccaactcaaactgatgcaacttttaattcccctctcggtgataataaacacaaggctacatacaaggccttgaagataaagaatgaggcagagccgaagctcacttggcccgaaagcaatactgttgcagccatggaaatatatgaaaagccggttgaggttggaacagttatagaagatccagagcctcctaaagaagtccagaaagagtggacttgtgctctgtctcaggtaactactacctgtgaaagaaatttgaattcccacctgcaagggagaaaacacaaggcagcatatgaggcactgaaagcagggaaccaggcatttgtgcccaagattgccccagcttcaactgcaaaaacatccaatcaaccaaataaggagccaggaaagagtattccgtgcagtggatccaaacaaaaagttactgtaaatgaaaatgtgcaaggccagaaaaatagtagtccagctccaatcacaaagaagcactataaaccgaaagaggagctagcagatggtgtatccagcaatggccagaaaaggaaaattgctatacaggtagagaaggtacaaagtcaacaaccgaagccaaatgaagttccaagggtgaagagttgtccttggcggtatccgattctgagggagaaggatttagctgatgagtgcccgacattttgggatggtgattgtgggacgacatatgctatttcggtgtggcgtcctgacaatttggctcgacggcggagtgttgatgttggtgaaatcgatatgtatacccctggttttgatgcctcgactgccgagcttgggctgcgactgtcgggaggaacctggctgaggatggcagttgagatgagcggcggcgctagactaggtaccgaggctgatttcagattgacagtgttgcagattgaggcgctgggtcggggcagtttcaacttcgtggaggcgttggatcgtggagtgttgggtcatggccgtttcgatttcggtggcggaattgtggagcgatgggtcatggcaaggtccgtggctgtgttcgcgtcgtga

Protein Analysis

548

Amino Acids

60.89

Weight (kDa)

9.7

Isoelectric Point (pI)

46.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000440)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20313 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_5g25851
prunus_persica Prupe.8G072900_v2.0.a1 Prupe.8G072900_v2.0.a1 Prupe.8G072900_v2.0.a1 Prupe.8G073000_v2.0.a1 Prupe.8G073000_v2.0.a1 Prupe.8G073000_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1
pyrus_communis pycom01g01210 pycom02g12000 pycom10g21410 pycom11g11060 pycom13g24280
rosa_chinensis RchiOBHm_Chr3g0461871 RchiOBHm_Chr4g0427221 RchiOBHm_Chr4g0427231 RchiOBHm_Chr6g0270081 RchiOBHm_Chr6g0270121 RchiOBHm_Chr6g0270151 RchiOBHm_Chr6g0270161 RchiOBHm_Chr6g0270171 RchiOBHm_Chr6g0270181 RchiOBHm_Chr6g0270191 RchiOBHm_Chr7g0229301
rosa_laevigata RLG00000013809 RLG00000013810 RLG00000013812 RLG00000013814 RLG00000013817 RLG00000013818
rosa_multiflora Rmu_sc0000918.1_g000004 Rmu_sc0000918.1_g000019 Rmu_sc0000918.1_g000027 Rmu_sc0002817.1_g000013 Rmu_sc0004366.1_g000009 Rmu_sc0004376.1_g000011 Rmu_sc0004376.1_g000014 Rmu_sc0004376.1_g000021 Rmu_sc0006909.1_g000002 Rmu_sc0011356.1_g000003 Rmu_sc0011369.1_g000005 Rmu_sc0017552.1_g000001
rosa_roxburghii Rroxscaffold_5G00354200 Rroxscaffold_7G00198080 Rroxscaffold_7G00198090 Rroxscaffold_7G00198100 Rroxscaffold_7G00198130 Rroxscaffold_7G00198170
rosa_rugosa Rorug06G0052400 Rorug06G0052500 Rorug06G0053000
rosa_samantha Rh6AG171300 Rh6AG171400 Rh6AG171800 Rh6AG171900 Rh6AG172000 Rh6AG172100 Rh6AG369700 Rh6BG175800 Rh6BG175900 Rh6BG176200 Rh6BG176300 Rh6CG170900 Rh6CG171100 Rh6CG171400 Rh6CG171500 Rh6CG171700 Rh6CG171900 Rh6CG172000 Rh6CG172100
rosa_wichuraiana Rw6G014730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 873
Acc36I ACCTGC 2 cut(s) 394, 873
Acc65I GGTACC 1 cut(s) 1472
AccB1I GGYRCC 1 cut(s) 1472
AccB7I CCANNNNNTGG 1 cut(s) 377
AccBSI CCGCTC 1 cut(s) 1455
AccI GTMKAC 1 cut(s) 1370
AccII CGCG 1 cut(s) 1640
AclWI GGATC 4 cut(s) 770, 1002, 1015, 1560
AcoI YGGCCR 2 cut(s) 1129, 1573
AcsI RAATTY 4 cut(s) 482, 537, 850, 856
AcuI CTGAAG 1 cut(s) 278
AcyI GRCGYC 1 cut(s) 1315
AfaI GTAC 4 cut(s) 5, 326, 1167, 1474
AfiI CCNNNNNNNGG 6 cut(s) 108, 201, 377, 1004, 1404, 1434
AflIII ACRYGT 1 cut(s) 348
AgsI TTSAA 4 cut(s) 670, 856, 948, 1534
AjnI CCWGG 4 cut(s) 915, 982, 1375, 1427
AjuI GAANNNNNNNTTGG 2 cut(s) 498, 530
Alw21I GWGCWC 1 cut(s) 820
Alw26I GTCTC 3 cut(s) 118, 150, 828
AlwI GGATC 4 cut(s) 770, 1002, 1015, 1560
AoxI GGCC 5 cut(s) 663, 704, 1045, 1129, 1573
ApeKI GCWGC 6 cut(s) 64, 521, 524, 725, 887, 1408
ApoI RAATTY 4 cut(s) 482, 537, 850, 856
Asp718I GGTACC 1 cut(s) 1472
AspLEI GCGC 4 cut(s) 69, 298, 1463, 1516
AspS9I GGNCC 4 cut(s) 35, 579, 705, 1623
AsuC2I CCSGG 1 cut(s) 196
AsuHPI GGTGA 5 cut(s) 424, 647, 1216, 1292, 1367
AsuNHI GCTAGC 2 cut(s) 434, 1105
AvaII GGWCC 3 cut(s) 35, 579, 1623
BaeGI GKGCMC 2 cut(s) 930, 1265
BalI TGGCCA 1 cut(s) 1131
BamHI GGATCC 1 cut(s) 1007
BanI GGYRCC 1 cut(s) 1472
BbsI GAAGAC 1 cut(s) 257
Bbv12I GWGCWC 1 cut(s) 820
BbvCI CCTCAGC 1 cut(s) 1433
BbvI GCAGC 6 cut(s) 76, 508, 536, 737, 899, 1395
BccI CCATC 5 cut(s) 262, 1106, 1271, 1432, 1602
BceAI ACGGC 5 cut(s) 41, 57, 134, 1352, 1560
BciT130I CCWGG 4 cut(s) 917, 984, 1377, 1429
BciVI GTATCC 3 cut(s) 538, 1129, 1236
BcnI CCSGG 1 cut(s) 196
BcoDI GTCTC 3 cut(s) 118, 150, 828
BfaI CTAG 7 cut(s) 92, 132, 435, 492, 1106, 1464, 1469
BfmI CTRYAG 1 cut(s) 522
BfoI RGCGCY 3 cut(s) 70, 1464, 1517
BfuAI ACCTGC 2 cut(s) 394, 873
BfuI GTATCC 3 cut(s) 538, 1129, 1236
BglI GCCNNNNNGGC 1 cut(s) 518
BisI GCNGC 9 cut(s) 65, 70, 522, 525, 726, 888, 1409, 1456, 1459
BlsI GCNGC 9 cut(s) 66, 71, 523, 526, 727, 889, 1410, 1457, 1460
Bme1390I CCNGG 5 cut(s) 196, 917, 984, 1377, 1429
Bme18I GGWCC 3 cut(s) 35, 579, 1623
BmgT120I GGNCC 4 cut(s) 35, 579, 705, 1623
BmiI GGNNCC 5 cut(s) 914, 981, 1009, 1426, 1474
BmrFI CCNGG 5 cut(s) 196, 917, 984, 1377, 1429
BmrI ACTGGG 1 cut(s) 287
BmsI GCATC 2 cut(s) 601, 1375
BmtI GCTAGC 2 cut(s) 438, 1109
BmuI ACTGGG 1 cut(s) 287
BoxI GACNNNNGTC 1 cut(s) 584
BpiI GAAGAC 1 cut(s) 257
Bpu10I CCTNAGC 1 cut(s) 1433
BpuEI CTTGAG 1 cut(s) 248
BpuMI CCSGG 1 cut(s) 196
Bsa29I ATCGAT 1 cut(s) 1362
BsaHI GRCGYC 1 cut(s) 1315
BsaI GGTCTC 1 cut(s) 150
BsaJI CCNNGG 7 cut(s) 73, 729, 1199, 1217, 1375, 1476, 1626
BsaWI WCCGGW 1 cut(s) 12
BsaXI ACNNNNNCTCC 2 cut(s) 538, 568
Bsc4I CCNNNNNNNGG 6 cut(s) 108, 201, 377, 1004, 1404, 1434
Bse118I RCCGGY 1 cut(s) 748
Bse1I ACTGG 2 cut(s) 28, 282
Bse3DI GCAATG 1 cut(s) 1132
BseBI CCWGG 4 cut(s) 917, 984, 1377, 1429
BseCI ATCGAT 1 cut(s) 1362
BseDI CCNNGG 7 cut(s) 73, 729, 1199, 1217, 1375, 1476, 1626
BseGI GGATG 3 cut(s) 959, 1282, 1443
BseLI CCNNNNNNNGG 6 cut(s) 108, 201, 377, 1004, 1404, 1434
BseMI GCAATG 1 cut(s) 1132
BseMII CTCAG 4 cut(s) 113, 839, 1226, 1424
BseNI ACTGG 2 cut(s) 28, 282
BseRI GAGGAG 3 cut(s) 93, 124, 1115
BseSI GKGCMC 2 cut(s) 930, 1265
BseXI GCAGC 6 cut(s) 76, 508, 536, 737, 899, 1395
BseYI CCCAGC 2 cut(s) 940, 1516
BsgI GTGCAG 2 cut(s) 422, 1021
Bsh1236I CGCG 1 cut(s) 1640
BshFI GGCC 5 cut(s) 665, 706, 1047, 1131, 1575
BshNI GGYRCC 1 cut(s) 1472
BshVI ATCGAT 1 cut(s) 1362
BsiHKAI GWGCWC 1 cut(s) 820
BsiSI CCGG 3 cut(s) 13, 195, 749
BslFI GGGAC 1 cut(s) 1303
BslI CCNNNNNNNGG 6 cut(s) 108, 201, 377, 1004, 1404, 1434
BsmAI GTCTC 3 cut(s) 118, 150, 828
BsmBI CGTCTC 1 cut(s) 118
BsmFI GGGAC 1 cut(s) 1303
BsnI GGCC 5 cut(s) 665, 706, 1047, 1131, 1575
Bso31I GGTCTC 1 cut(s) 150
Bsp1286I GDGCHC 3 cut(s) 820, 930, 1265
Bsp143I GATC 3 cut(s) 775, 1007, 1552
Bsp19I CCATGG 1 cut(s) 729
BspANI GGCC 5 cut(s) 665, 706, 1047, 1131, 1575
BspCNI CTCAG 4 cut(s) 114, 838, 1227, 1425
BspDI ATCGAT 1 cut(s) 1362
BspFNI CGCG 1 cut(s) 1640
BspLI GGNNCC 5 cut(s) 914, 981, 1009, 1426, 1474
BspMAI CTGCAG 1 cut(s) 526
BspMI ACCTGC 2 cut(s) 394, 873
BspOI GCTAGC 2 cut(s) 438, 1109
BspPI GGATC 4 cut(s) 770, 1002, 1015, 1560
BspT107I GGYRCC 1 cut(s) 1472
BspTNI GGTCTC 1 cut(s) 150
BsrBI CCGCTC 1 cut(s) 1455
BsrDI GCAATG 1 cut(s) 1132
BsrFI RCCGGY 1 cut(s) 748
BsrI ACTGG 2 cut(s) 28, 282
BssAI RCCGGY 1 cut(s) 748
BssECI CCNNGG 7 cut(s) 73, 729, 1199, 1217, 1375, 1476, 1626
BssMI GATC 3 cut(s) 775, 1007, 1552
BssNAI GTATAC 1 cut(s) 1371
BssNI GRCGYC 1 cut(s) 1315
BssT1I CCWWGG 3 cut(s) 729, 1199, 1217
Bst1107I GTATAC 1 cut(s) 1371
Bst2UI CCWGG 4 cut(s) 917, 984, 1377, 1429
Bst4CI ACNGT 8 cut(s) 8, 469, 586, 721, 766, 1027, 1416, 1498
Bst6I CTCTTC 1 cut(s) 1202
BstACI GRCGYC 1 cut(s) 1315
BstC8I GCNNGC 2 cut(s) 436, 1107
BstDEI CTNAG 5 cut(s) 122, 223, 825, 1235, 1433
BstDSI CCRYGG 3 cut(s) 73, 729, 1626
BstENI CCTNNNNNAGG 1 cut(s) 1432
BstF5I GGATG 3 cut(s) 959, 1282, 1443
BstFNI CGCG 1 cut(s) 1640
BstH2I RGCGCY 3 cut(s) 70, 1464, 1517
BstHHI GCGC 4 cut(s) 69, 298, 1463, 1516
BstKTI GATC 3 cut(s) 778, 1010, 1555
BstMAI GTCTC 3 cut(s) 118, 150, 828
BstMBI GATC 3 cut(s) 775, 1007, 1552
BstMWI GCNNNNNNNGC 9 cut(s) 326, 518, 703, 896, 905, 950, 1394, 1408, 1637
BstNI CCWGG 4 cut(s) 917, 984, 1377, 1429
BstPAI GACNNNNGTC 1 cut(s) 584
BstSCI CCNGG 5 cut(s) 194, 915, 982, 1375, 1427
BstSFI CTRYAG 1 cut(s) 522
BstSLI GKGCMC 2 cut(s) 930, 1265
BstUI CGCG 1 cut(s) 1640
BstV1I GCAGC 6 cut(s) 76, 508, 536, 737, 899, 1395
BstV2I GAAGAC 1 cut(s) 257
BstX2I RGATCY 2 cut(s) 775, 1007
BstYI RGATCY 2 cut(s) 775, 1007
BstZ17I GTATAC 1 cut(s) 1371
Bsu15I ATCGAT 1 cut(s) 1362
BsuI GTATCC 3 cut(s) 538, 1129, 1236
BsuRI GGCC 5 cut(s) 665, 706, 1047, 1131, 1575
BsuTUI ATCGAT 1 cut(s) 1362
BtgI CCRYGG 3 cut(s) 73, 729, 1626
BtgZI GCGATG 1 cut(s) 1621
BtsCI GGATG 3 cut(s) 959, 1282, 1443
BtsI GCAGTG 2 cut(s) 147, 1009
BtsIMutI CAGTG 5 cut(s) 147, 465, 899, 1009, 1503
BveI ACCTGC 2 cut(s) 394, 873
Cac8I GCNNGC 2 cut(s) 436, 1107
CfoI GCGC 4 cut(s) 69, 298, 1463, 1516
Cfr10I RCCGGY 1 cut(s) 748
Cfr13I GGNCC 4 cut(s) 35, 579, 705, 1623
ClaI ATCGAT 1 cut(s) 1362
CseI GACGC 3 cut(s) 262, 1304, 1629
Csp6I GTAC 4 cut(s) 4, 325, 1166, 1473
CspCI CAANNNNNGTGG 2 cut(s) 1608, 1643
CviAII CATG 5 cut(s) 311, 321, 730, 1571, 1615
CviQI GTAC 4 cut(s) 4, 325, 1166, 1473
DdeI CTNAG 5 cut(s) 122, 223, 825, 1235, 1433
DpnI GATC 3 cut(s) 777, 1009, 1554
DpnII GATC 3 cut(s) 775, 1007, 1552
EaeI YGGCCR 2 cut(s) 1129, 1573
Eam1104I CTCTTC 1 cut(s) 1202
EarI CTCTTC 1 cut(s) 1202
EciI GGCGGA 3 cut(s) 230, 1354, 1608
Eco130I CCWWGG 3 cut(s) 729, 1199, 1217
Eco147I AGGCCT 1 cut(s) 665
Eco31I GGTCTC 1 cut(s) 150
Eco32I GATATC 1 cut(s) 391
Eco47I GGWCC 3 cut(s) 35, 579, 1623
Eco57I CTGAAG 1 cut(s) 278
EcoNI CCTNNNNNAGG 1 cut(s) 1432
EcoRI GAATTC 1 cut(s) 856
EcoRII CCWGG 4 cut(s) 915, 982, 1375, 1427
EcoRV GATATC 1 cut(s) 391
EcoT14I CCWWGG 3 cut(s) 729, 1199, 1217
ErhI CCWWGG 3 cut(s) 729, 1199, 1217
Esp3I CGTCTC 1 cut(s) 118
FaeI CATG 5 cut(s) 314, 324, 733, 1574, 1618
FalI AAGNNNNNCTT 2 cut(s) 257, 289
FaqI GGGAC 1 cut(s) 1303
FatI CATG 5 cut(s) 310, 320, 729, 1570, 1614
FauNDI CATATG 2 cut(s) 892, 1297
FblI GTMKAC 1 cut(s) 1370
Fnu4HI GCNGC 9 cut(s) 65, 70, 522, 525, 726, 888, 1409, 1456, 1459
FokI GGATG 3 cut(s) 946, 1289, 1450
Fsp4HI GCNGC 9 cut(s) 65, 70, 522, 525, 726, 888, 1409, 1456, 1459
FspBI CTAG 7 cut(s) 92, 132, 435, 492, 1106, 1464, 1469
GlaI GCGC 4 cut(s) 68, 297, 1462, 1515
GluI GCNGC 9 cut(s) 65, 70, 522, 525, 726, 888, 1409, 1456, 1459
GsaI CCCAGC 2 cut(s) 944, 1520
HaeII RGCGCY 3 cut(s) 70, 1464, 1517
HaeIII GGCC 5 cut(s) 665, 706, 1047, 1131, 1575
HapII CCGG 3 cut(s) 13, 195, 749
HgaI GACGC 3 cut(s) 262, 1304, 1629
HhaI GCGC 4 cut(s) 69, 298, 1463, 1516
Hin1I GRCGYC 1 cut(s) 1315
Hin1II CATG 5 cut(s) 314, 324, 733, 1574, 1618
Hin6I GCGC 4 cut(s) 67, 296, 1461, 1514
HinP1I GCGC 4 cut(s) 67, 296, 1461, 1514
HincII GTYRAC 1 cut(s) 1175
HindII GTYRAC 1 cut(s) 1175
HinfI GANTC 2 cut(s) 83, 1231
HpaII CCGG 3 cut(s) 13, 195, 749
HphI GGTGA 5 cut(s) 424, 647, 1216, 1292, 1367
Hpy166II GTNNAC 5 cut(s) 380, 579, 810, 1175, 1371
Hpy188I TCNGA 4 cut(s) 39, 1230, 1236, 1490
Hpy188III TCNNGA 8 cut(s) 265, 542, 568, 779, 799, 1319, 1419, 1644
Hpy8I GTNNAC 5 cut(s) 380, 579, 810, 1175, 1371
Hpy99I CGWCG 3 cut(s) 343, 1338, 1645
HpyAV CCTTC 4 cut(s) 415, 565, 1156, 1237
HpyCH4III ACNGT 8 cut(s) 8, 469, 586, 721, 766, 1027, 1416, 1498
HpyCH4IV ACGT 2 cut(s) 21, 350
HpyF10VI GCNNNNNNNGC 9 cut(s) 326, 518, 703, 896, 905, 950, 1394, 1408, 1637
HpyF3I CTNAG 5 cut(s) 122, 223, 825, 1235, 1433
HpySE526I ACGT 2 cut(s) 21, 350
Hsp92I GRCGYC 1 cut(s) 1315
Hsp92II CATG 5 cut(s) 314, 324, 733, 1574, 1618
HspAI GCGC 4 cut(s) 67, 296, 1461, 1514
KpnI GGTACC 1 cut(s) 1476
Kzo9I GATC 3 cut(s) 775, 1007, 1552
LmnI GCTCC 7 cut(s) 15, 111, 303, 979, 1072, 1102, 1603
Lsp1109I GCAGC 6 cut(s) 76, 508, 536, 737, 899, 1395
LweI GCATC 2 cut(s) 601, 1375
MaeI CTAG 7 cut(s) 92, 132, 435, 492, 1106, 1464, 1469
MaeII ACGT 2 cut(s) 21, 350
MaeIII GTNAC 4 cut(s) 8, 239, 829, 1021
MalI GATC 3 cut(s) 777, 1009, 1554
MbiI CCGCTC 1 cut(s) 1455
MboI GATC 3 cut(s) 775, 1007, 1552
MboII GAAGA 7 cut(s) 262, 480, 488, 508, 682, 785, 1219
MflI RGATCY 2 cut(s) 775, 1007
MhlI GDGCHC 3 cut(s) 820, 930, 1265
MlsI TGGCCA 1 cut(s) 1131
MluCI AATT 8 cut(s) 482, 537, 622, 850, 856, 1143, 1324, 1596
MluNI TGGCCA 1 cut(s) 1131
MmeI TCCRAC 3 cut(s) 268, 739, 1530
Mox20I TGGCCA 1 cut(s) 1131
MscI TGGCCA 1 cut(s) 1131
MseI TTAA 1 cut(s) 621
Msp20I TGGCCA 1 cut(s) 1131
MspA1I CMGCKG 1 cut(s) 162
MspI CCGG 3 cut(s) 13, 195, 749
MspR9I CCNGG 5 cut(s) 196, 917, 984, 1377, 1429
MvaI CCWGG 4 cut(s) 917, 984, 1377, 1429
MvnI CGCG 1 cut(s) 1640
MwoI GCNNNNNNNGC 9 cut(s) 326, 518, 703, 896, 905, 950, 1394, 1408, 1637
NciI CCSGG 1 cut(s) 196
NcoI CCATGG 1 cut(s) 729
NdeI CATATG 2 cut(s) 892, 1297
NdeII GATC 3 cut(s) 775, 1007, 1552
NheI GCTAGC 2 cut(s) 434, 1105
NlaIII CATG 5 cut(s) 314, 324, 733, 1574, 1618
NlaIV GGNNCC 5 cut(s) 914, 981, 1009, 1426, 1474
NmeAIII GCCGAG 1 cut(s) 1423
NmuCI GTSAC 1 cut(s) 8
PaqCI CACCTGC 1 cut(s) 873
PceI AGGCCT 1 cut(s) 665
PcsI WCGNNNNNNNCGW 2 cut(s) 124, 347
PfeI GAWTC 2 cut(s) 83, 1231
PflMI CCANNNNNTGG 1 cut(s) 377
PkrI GCNGC 9 cut(s) 66, 71, 523, 526, 727, 889, 1410, 1457, 1460
PshAI GACNNNNGTC 1 cut(s) 584
Psp6I CCWGG 4 cut(s) 915, 982, 1375, 1427
PspFI CCCAGC 2 cut(s) 940, 1516
PspGI CCWGG 4 cut(s) 915, 982, 1375, 1427
PspN4I GGNNCC 5 cut(s) 914, 981, 1009, 1426, 1474
PspPI GGNCC 4 cut(s) 35, 579, 705, 1623
PstI CTGCAG 1 cut(s) 526
PsuI RGATCY 2 cut(s) 775, 1007
RsaI GTAC 4 cut(s) 5, 326, 1167, 1474
RsaNI GTAC 4 cut(s) 4, 325, 1166, 1473
SaqAI TTAA 1 cut(s) 621
SatI GCNGC 9 cut(s) 65, 70, 522, 525, 726, 888, 1409, 1456, 1459
Sau3AI GATC 3 cut(s) 775, 1007, 1552
Sau96I GGNCC 4 cut(s) 35, 579, 705, 1623
ScrFI CCNGG 5 cut(s) 196, 917, 984, 1377, 1429
SduI GDGCHC 3 cut(s) 820, 930, 1265
SfaNI GCATC 2 cut(s) 601, 1375
SfcI CTRYAG 1 cut(s) 522
SinI GGWCC 3 cut(s) 35, 579, 1623
SmlI CTYRAG 1 cut(s) 263
SmoI CTYRAG 1 cut(s) 263
Sse9I AATT 8 cut(s) 482, 537, 622, 850, 856, 1143, 1324, 1596
SseBI AGGCCT 1 cut(s) 665
SspI AATATT 1 cut(s) 144
SspMI CTAG 7 cut(s) 92, 132, 435, 492, 1106, 1464, 1469
StuI AGGCCT 1 cut(s) 665
StyD4I CCNGG 5 cut(s) 194, 915, 982, 1375, 1427
StyI CCWWGG 3 cut(s) 729, 1199, 1217
TaaI ACNGT 8 cut(s) 8, 469, 586, 721, 766, 1027, 1416, 1498
TaiI ACGT 2 cut(s) 24, 353
TaqI TCGA 4 cut(s) 1333, 1362, 1391, 1581
TasI AATT 8 cut(s) 482, 537, 622, 850, 856, 1143, 1324, 1596
TauI GCSGC 3 cut(s) 72, 1458, 1461
TfiI GAWTC 2 cut(s) 83, 1231
Tru1I TTAA 1 cut(s) 621
Tru9I TTAA 1 cut(s) 621
TscAI CASTG 5 cut(s) 154, 472, 906, 1009, 1503
TseFI GTSAC 1 cut(s) 8
TseI GCWGC 6 cut(s) 64, 521, 524, 725, 887, 1408
Tsp45I GTSAC 1 cut(s) 8
TspDTI ATGAA 8 cut(s) 299, 359, 489, 515, 519, 756, 1047, 1206
TspGWI ACGGA 2 cut(s) 987, 1615
TspRI CASTG 5 cut(s) 154, 472, 906, 1009, 1503
Van91I CCANNNNNTGG 1 cut(s) 377
VpaK11BI GGWCC 3 cut(s) 35, 579, 1623
XagI CCTNNNNNAGG 1 cut(s) 1432
XapI RAATTY 4 cut(s) 482, 537, 850, 856
XmiI GTMKAC 1 cut(s) 1370
XspI CTAG 7 cut(s) 92, 132, 435, 492, 1106, 1464, 1469
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.